BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022413
(297 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 127/200 (63%), Gaps = 12/200 (6%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+DL+ AT NF L+G G FG+VYKG + D G VA+K+ PES QG E
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIE 80
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E+++E+ L HP+LV L+G+C E E++L+Y+YM+ G+L+ HL+ + +SW+
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
RL+I IGAARGL +LHT + +I+RD K+ NILLD N+ KI+DFG++K G G++H+
Sbjct: 141 RLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 261 TRVMGTYGYAAPEYVATGNF 280
V GT GY PEY G
Sbjct: 199 XVVKGTLGYIDPEYFIKGRL 218
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 129/215 (60%), Gaps = 13/215 (6%)
Query: 76 LKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES 135
LK FS +L+ A+ NF ++LG GGFG+VYKG + D TL VA+K+L E
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL----------VAVKRLKEER 74
Query: 136 MQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQ 194
QG E ++Q+EV + H NL++L G+C E LLVY YM GS+ + L R S
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 195 PLSWDIRLKIAIGAARGLGFLHT-SEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPA 253
PL W R +IA+G+ARGL +LH + K+I+RD KA+NILLD + A + DFGLAKL
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 254 GGESHVTTRVMGTYGYAAPEYVATGNFYLLSAKFG 288
+ HV V GT G+ APEY++TG + FG
Sbjct: 195 -KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFG 228
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 126/200 (63%), Gaps = 12/200 (6%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+DL+ AT NF L+G G FG+VYKG + D G VA+K+ PES QG E
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIE 80
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E+++E+ L HP+LV L+G+C E E++L+Y+YM+ G+L+ HL+ + +SW+
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
RL+I IGAARGL +LHT + +I+RD K+ NILLD N+ KI+DFG++K G ++H+
Sbjct: 141 RLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 261 TRVMGTYGYAAPEYVATGNF 280
V GT GY PEY G
Sbjct: 199 XVVKGTLGYIDPEYFIKGRL 218
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 13/215 (6%)
Query: 76 LKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES 135
LK FS +L+ A+ NF ++LG GGFG+VYKG + D G +VA+K+L E
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD----------GXLVAVKRLKEER 66
Query: 136 MQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQ 194
QG E ++Q+EV + H NL++L G+C E LLVY YM GS+ + L R S
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 195 PLSWDIRLKIAIGAARGLGFLHT-SEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPA 253
PL W R +IA+G+ARGL +LH + K+I+RD KA+NILLD + A + DFGLAKL
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 254 GGESHVTTRVMGTYGYAAPEYVATGNFYLLSAKFG 288
+ HV V G G+ APEY++TG + FG
Sbjct: 187 -KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFG 220
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 129/211 (61%), Gaps = 18/211 (8%)
Query: 71 LETPDLKV--FSFLDLKSATKNF--KPDSL----LGEGGFGRVYKGWVDDKTLAPSKTGL 122
LE D + FSF +LK+ T NF +P S+ +GEGGFG VYKG+V++ T+A K
Sbjct: 5 LEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK--- 61
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
+ A+ + E ++ +++ E+ + + H NLV+LLG+ + +L LVY YM GSL
Sbjct: 62 --LAAMVDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ L + + PLSW +R KIA GAA G+ FLH E I+RD K++NILLD + AKI
Sbjct: 118 LDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKI 174
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
SDFGLA+ ++ + +R++GT Y APE
Sbjct: 175 SDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 128/211 (60%), Gaps = 18/211 (8%)
Query: 71 LETPDLKV--FSFLDLKSATKNF--KPDSL----LGEGGFGRVYKGWVDDKTLAPSKTGL 122
LE D + FSF +LK+ T NF +P S+ +GEGGFG VYKG+V++ T+A K
Sbjct: 5 LEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK--- 61
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
+ A+ + E ++ +++ E+ + + H NLV+LLG+ + +L LVY YM GSL
Sbjct: 62 --LAAMVDITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ L + + PLSW +R KIA GAA G+ FLH E I+RD K++NILLD + AKI
Sbjct: 118 LDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKI 174
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
SDFGLA+ ++ + R++GT Y APE
Sbjct: 175 SDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 123/201 (61%), Gaps = 16/201 (7%)
Query: 79 FSFLDLKSATKNF--KPDSL----LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN 132
FSF +LK+ T NF +P S+ +GEGGFG VYKG+V++ T+A K + A+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK-----LAAMVDIT 63
Query: 133 PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS 192
E ++ +++ E+ + + H NLV+LLG+ + +L LVY YM GSL + L + +
Sbjct: 64 TEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 193 IQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGP 252
PLSW +R KIA GAA G+ FLH E I+RD K++NILLD + AKISDFGLA+
Sbjct: 122 -PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 253 AGGESHVTTRVMGTYGYAAPE 273
+ + R++GT Y APE
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE 199
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 16/201 (7%)
Query: 79 FSFLDLKSATKNF--KPDSL----LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN 132
FSF +LK+ T NF +P S+ GEGGFG VYKG+V++ T+A K + A+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKK-----LAAMVDIT 60
Query: 133 PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS 192
E ++ +++ E+ + H NLV+LLG+ + +L LVY Y GSL + L + +
Sbjct: 61 TEELK--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 193 IQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGP 252
PLSW R KIA GAA G+ FLH E I+RD K++NILLD + AKISDFGLA+
Sbjct: 119 -PPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 253 AGGESHVTTRVMGTYGYAAPE 273
+ +R++GT Y APE
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPE 196
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 99/185 (53%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G+GGFG V+KG V DK++ K+ +++ + E ++ F+E+Q EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VKL G + V E++ G L + L + P+ W ++L++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYM 138
Query: 216 HTSEKKVIYRDFKASNILL-----DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+++RD ++ NI L + AK++DFGL++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWM 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APETI 198
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 37/202 (18%)
Query: 94 DSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPES--MQGFEEWQSEVNFLG 150
+ ++G GGFG+VY+ W+ D+ + V + +P+ Q E + E
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDE----------VAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLF-RRNPSIQPLSWDIRLKIAIGAA 209
L HPN++ L G C ++ L LV E+ + G L L +R P DI + A+ A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP------DILVNWAVQIA 115
Query: 210 RGLGFLHTSE-KKVIYRDFKASNILL--------DGNYNAKISDFGLAKLGPAGGESHVT 260
RG+ +LH +I+RD K+SNIL+ N KI+DFGLA+ E H T
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRT 169
Query: 261 TRV--MGTYGYAAPEYVATGNF 280
T++ G Y + APE + F
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMF 191
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G+GGFG V+KG V DK++ K+ +++ + E ++ F+E+Q EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VKL G + V E++ G L + L + P+ W ++L++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYM 138
Query: 216 HTSEKKVIYRDFKASNILL-----DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+++RD ++ NI L + AK++DFG ++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWM 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APETI 198
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G+GGFG V+KG V DK++ K+ +++ + E ++ F+E+Q EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VKL G + V E++ G L + L + P+ W ++L++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYM 138
Query: 216 HTSEKKVIYRDFKASNILL-----DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+++RD ++ NI L + AK++DF L++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWM 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APETI 198
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGLA++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 18/182 (9%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQG--FEEWQSEVNFLGRLS 153
+G G FG V++ W G VA+K L + E+ EV + RL
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V +G + L +V EY+ RGSL L ++ + + L RL +A A+G+
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH +++RD K+ N+L+D Y K+ DFGL++L + GT + APE
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 274 YV 275
+
Sbjct: 210 VL 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
N ++ PD ++ LD + K ++GEG FG+V K + K GL M
Sbjct: 4 NRKVKNNPDPTIYPVLDWN----DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDA 52
Query: 127 AIKKLNP-ESMQGFEEWQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
AIK++ S ++ E+ L +L HPN++ LLG C L L EY G+L +
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 185 HLFRR------------NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI 232
L + N + LS L A ARG+ +L S+K+ I+R+ A NI
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRNLAARNI 170
Query: 233 LLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
L+ NY AKI+DFGL++ G+ + MG
Sbjct: 171 LVGENYVAKIADFGLSR-----GQEVYVKKTMG 198
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 22/195 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN----PESMQGFEEWQSEVNFLGRL 152
LGEG FG+V D P+ G G +VA+K L P+ G W+ E++ L L
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTL 73
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
H +++K G C + +K L LV EY+ GSL ++L R + + L L A
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICE 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGY 269
G+ +LH+ + I+R+ A N+LLD + KI DFGLAK P G E + V +
Sbjct: 129 GMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 270 AAPEYVATGNFYLLS 284
APE + FY S
Sbjct: 187 YAPECLKEYKFYYAS 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 32/206 (15%)
Query: 74 PDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP 133
PD ++ LD + K ++GEG FG+V K + K GL M AIK++
Sbjct: 14 PDPTIYPVLDWN----DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKE 62
Query: 134 -ESMQGFEEWQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR-- 189
S ++ E+ L +L HPN++ LLG C L L EY G+L + L +
Sbjct: 63 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 122
Query: 190 ----------NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN 239
N + LS L A ARG+ +L S+K+ I+RD A NIL+ NY
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYV 180
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMG 265
AKI+DFGL++ G+ + MG
Sbjct: 181 AKIADFGLSR-----GQEVYVKKTMG 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGL+++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 32/206 (15%)
Query: 74 PDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP 133
PD ++ LD + K ++GEG FG+V K + K GL M AIK++
Sbjct: 4 PDPTIYPVLDWN----DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKE 52
Query: 134 -ESMQGFEEWQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR-- 189
S ++ E+ L +L HPN++ LLG C L L EY G+L + L +
Sbjct: 53 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 112
Query: 190 ----------NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN 239
N + LS L A ARG+ +L S+K+ I+RD A NIL+ NY
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYV 170
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMG 265
AKI+DFGL++ G+ + MG
Sbjct: 171 AKIADFGLSR-----GQEVYVKKTMG 191
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E P V F AT N D ++G G FG V G + PSK + VAIK L
Sbjct: 27 EDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTL 79
Query: 132 NPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GSL++ L
Sbjct: 80 K----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ + + +G RG+ G + S+ ++RD A NIL++ N K+SD
Sbjct: 136 RKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 188
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FGL+++ E+ TTR + +PE +A F
Sbjct: 189 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGL+++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGL+++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E P V F AT N D ++G G FG V G + PSK + VAIK L
Sbjct: 29 EDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTL 81
Query: 132 NPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GSL++ L
Sbjct: 82 K----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ + + +G RG+ G + S+ ++RD A NIL++ N K+SD
Sbjct: 138 RKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FGL+++ E+ TTR + +PE +A F
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN----PESMQGFEEWQSEVNFLGRL 152
LGEG FG+V D P+ G G +VA+K L P+ G W+ E++ L L
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTL 73
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
H +++K G C + +K L LV EY+ GSL ++L R + + L L A
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICE 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGY 269
G+ +LH + I+R+ A N+LLD + KI DFGLAK P G E + V +
Sbjct: 129 GMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 270 AAPEYVATGNFYLLS 284
APE + FY S
Sbjct: 187 YAPECLKEYKFYYAS 201
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E P V F AT N D ++G G FG V G + PSK + VAIK L
Sbjct: 29 EDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTL 81
Query: 132 NPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GSL++ L
Sbjct: 82 K----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ + + +G RG+ G + S+ ++RD A NIL++ N K+SD
Sbjct: 138 RKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FGL+++ E+ TTR + +PE +A F
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 94/193 (48%), Gaps = 18/193 (9%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRLSHP 155
LGEG FG+V D P+ G G +VA+K L ++ Q W+ E++ L L H
Sbjct: 39 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 156 NLVKLLGYCWEDK---ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
+++K G C ED L LV EY+ GSL ++L R + + L L A G+
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 147
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGYAA 271
+LH + I+RD A N+LLD + KI DFGLAK P G E + V + A
Sbjct: 148 AYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 272 PEYVATGNFYLLS 284
PE + FY S
Sbjct: 206 PECLKEYKFYYAS 218
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQG--FEEWQSEVNFLGRLS 153
+G G FG V++ W G VA+K L + E+ EV + RL
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V +G + L +V EY+ RGSL L ++ + + L RL +A A+G+
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH +++R+ K+ N+L+D Y K+ DFGL++L + S + GT + APE
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPE 209
Query: 274 YV 275
+
Sbjct: 210 VL 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V EYM+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGL ++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN----PESMQGFEEWQSEVNFLGRL 152
LGEG FG+V D P+ G G +VA+K L P+ G WQ E+ L L
Sbjct: 17 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTL 68
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
H ++VK G C + +K + LV EY+ GSL ++L R + L L A
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICE 123
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGY 269
G+ +LH + I+R A N+LLD + KI DFGLAK P G E + V +
Sbjct: 124 GMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 270 AAPEYVATGNFYLLS 284
APE + FY S
Sbjct: 182 YAPECLKECKFYYAS 196
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS----- 144
N D ++G G FG V G + PSK + VAIK L G+ E Q
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTLK----VGYTEKQRRDFLG 66
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E + +G+ HPN+++L G + K +++V EYM+ GSL++ L + + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------- 119
Query: 205 AIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+G RG+ G + S+ ++RD A NIL++ N K+SDFGL+++ E+ TTR
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 263 VMGT-YGYAAPEYVATGNF 280
+ +PE +A F
Sbjct: 180 GGKIPIRWTSPEAIAYRKF 198
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN----PESMQGFEEWQSEVNFLGRL 152
LGEG FG+V D P+ G G +VA+K L P+ G WQ E+ L L
Sbjct: 16 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTL 67
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
H ++VK G C + +K + LV EY+ GSL ++L R + L L A
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICE 122
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGY 269
G+ +LH + I+R A N+LLD + KI DFGLAK P G E + V +
Sbjct: 123 GMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 270 AAPEYVATGNFYLLS 284
APE + FY S
Sbjct: 181 YAPECLKECKFYYAS 195
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS----- 144
N D ++G G FG V G + PSK + VAIK L G+ E Q
Sbjct: 34 NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTLK----VGYTEKQRRDFLG 83
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E + +G+ HPN+++L G + K +++V EYM+ GSL++ L + + +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------- 136
Query: 205 AIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+G RG+ G + S+ ++RD A NIL++ N K+SDFGL+++ E+ TTR
Sbjct: 137 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 263 VMGT-YGYAAPEYVATGNF 280
+ +PE +A F
Sbjct: 197 GGKIPIRWTSPEAIAYRKF 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ E P V F AT N D ++G G FG V G + PSK + V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--V 76
Query: 127 AIKKLNPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+++L G + K +++V E M+ GS
Sbjct: 77 AIKTLK----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L++ L + + + +G RG+ G + S+ ++RD A NIL++ N
Sbjct: 133 LDSFLRKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLV 185
Query: 240 AKISDFGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
K+SDFGL+++ E+ TTR + +PE +A F
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E P V F AT N D ++G G FG V G + PSK + VAIK L
Sbjct: 29 EDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTL 81
Query: 132 NPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
G+ E Q E + +G+ HPN+++L G + K +++V E M+ GSL++ L
Sbjct: 82 K----VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ + + +G RG+ G + S+ ++RD A NIL++ N K+SD
Sbjct: 138 RKHDAQFTVIQ-------LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FGL+++ E+ TTR + +PE +A F
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 17 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 128
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 129 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 23 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 134
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 135 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 193 SLTESKFSVASDVWSFGVVL 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 49 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 160
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 161 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 24 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 135
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 136 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 194 SLTESKFSVASDVWSFGVVL 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 132
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 133 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 191 SLTESKFSVASDVWSFGVVL 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 130 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 130 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 188 SLTESKFSVASDVWSFGVVL 207
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 25 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 136
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 137 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 195 SLTESKFSVASDVWSFGVVL 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 22 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 133
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 134 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 192 SLTESKFSVASDVWSFGVVL 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 16 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 127
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 128 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 186 SLTESKFSVASDVWSFGVVL 205
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 129
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 130 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 147
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 148 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 147
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 148 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 30/217 (13%)
Query: 79 FSFLDLKSATKNF---------KPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIK 129
F+F D A + F K + ++G G FG V G + P K + VAIK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG----RLKVPGKREI--CVAIK 63
Query: 130 KLNP-ESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR 188
L + + ++ SE + +G+ HPN++ L G + K ++++ EYM+ GSL+ L R
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-R 122
Query: 189 RNPSIQPLSWDIRLKIA--IGAARGLG--FLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+N D R + +G RG+G + S+ ++RD A NIL++ N K+SD
Sbjct: 123 KN--------DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSD 174
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FG++++ E+ TTR + APE +A F
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 71 LETPDLKVFSFLDLKSATKNFKPDSL------LGEGGFGRVYKGWVDDKTLAPSKTGLGM 124
L P + LD S TK +P+ + LGEG +G VYK + +T G
Sbjct: 7 LRNPPRRQLKKLDEDSLTK--QPEEVFDVLEKLGEGSYGSVYKA-IHKET--------GQ 55
Query: 125 VVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+VAIK++ ES +E E++ + + P++VK G +++ +L +V EY GS+ +
Sbjct: 56 IVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ RN + L+ D I +GL +LH K I+RD KA NILL+ +AK++D
Sbjct: 114 IIRLRNKT---LTEDEIATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLAD 168
Query: 245 FGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
FG+A G V+GT + APE +
Sbjct: 169 FGVA--GQLTDXMAKRNXVIGTPFWMAPEVI 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 61 VEEASPNGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSK 119
VE +P+G L++ +LK +LG G FG VYKG WV P
Sbjct: 17 VEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWV------PEG 63
Query: 120 TGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQ 178
+ + VAIK LN + + E+ E + + HP+LV+LLG C + LV + M
Sbjct: 64 ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMP 122
Query: 179 RGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY 238
G L ++ +I + L + A+G+ +L E+++++RD A N+L+
Sbjct: 123 HGCLLEYVHEHKDNI---GSQLLLNWCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPN 177
Query: 239 NAKISDFGLAKL 250
+ KI+DFGLA+L
Sbjct: 178 HVKITDFGLARL 189
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEEWQSEVNFLGRLSHP 155
LGEG FG+V D P G VA+K L PES + + E+ L L H
Sbjct: 29 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 156 NLVKLLGYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
N+VK G C ED + L+ E++ GSL+ +L + I + +LK A+ +G+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAVQICKGMD 140
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT--RVMGTYGYAA 271
+L + ++ ++RD A N+L++ + KI DFGL K E R + Y A
Sbjct: 141 YLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 197
Query: 272 PEYVATGNFYLLS 284
PE + FY+ S
Sbjct: 198 PECLMQSKFYIAS 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 57 SEAGVEEASPNGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLA 116
SE ++ PN P L L L+ N + +GEG FGRV++ L
Sbjct: 15 SELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARA--PGLL 72
Query: 117 PSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYE 175
P + +VA+K L E+ + ++Q E + +PN+VKLLG C K + L++E
Sbjct: 73 PYEPF--TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130
Query: 176 YMQRGSLENHLFRRNPSI--------------------QPLSWDIRLKIAIGAARGLGFL 215
YM G L L +P PLS +L IA A G+ +L
Sbjct: 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL 190
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
SE+K ++RD N L+ N KI+DFGL++
Sbjct: 191 --SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS----- 144
N D ++G G FG V G + PSK + VAIK L G+ E Q
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEIS--VAIKTLK----VGYTEKQRRDFLG 66
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E + +G+ HPN+++L G + K +++V E M+ GSL++ L + + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ------- 119
Query: 205 AIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+G RG+ G + S+ ++RD A NIL++ N K+SDFGL+++ E+ TTR
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 263 VMGT-YGYAAPEYVATGNF 280
+ +PE +A F
Sbjct: 180 GGKIPIRWTSPEAIAYRKF 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 63
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + S + IA AR
Sbjct: 64 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTAR 119
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 120 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 271 APEYV 275
APE +
Sbjct: 178 APEVI 182
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEEWQSEVNFLGRLSHP 155
LGEG FG+V D P G VA+K L PES + + E+ L L H
Sbjct: 17 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 156 NLVKLLGYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
N+VK G C ED + L+ E++ GSL+ +L + I + +LK A+ +G+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAVQICKGMD 128
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT--RVMGTYGYAA 271
+L + ++ ++RD A N+L++ + KI DFGL K E R + Y A
Sbjct: 129 YLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 185
Query: 272 PEYVATGNFYLLS 284
PE + FY+ S
Sbjct: 186 PECLMQSKFYIAS 198
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 19 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L + I + L+ +G+ +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEY 130
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH-VTTRVMGTYGYAAPE 273
L T K+ I+R+ NIL++ KI DFGL K+ P E + V + APE
Sbjct: 131 LGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 189 SLTESKFSVASDVWSFGVVL 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ E++ GSL +L + I + L+ +G+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL---LQYTSQICKGMEY 132
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE-SHVTTRVMGTYGYAAPE 273
L T K+ I+RD NIL++ KI DFGL K+ P E V + APE
Sbjct: 133 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 274 YVATGNFYLLSA--KFGNVI 291
+ F + S FG V+
Sbjct: 191 SLTESKFSVASDVWSFGVVL 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V D P + G VVA+KKL + + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 157 LVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
+VK G C+ + L L+ EY+ GSL ++L I + L+ +G+ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEY 132
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L T K+ I+RD NIL++ KI DFGL K+ P E
Sbjct: 133 LGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG---FEEWQSE 145
++FK +LLG+G F VY+ G+ VAIK ++ ++M + Q+E
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA 205
V +L HP++++L Y + + LV E G + +L R ++P S +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFM 118
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
G+ +LH+ +++RD SN+LL N N KI+DFGLA E H T + G
Sbjct: 119 HQIITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 266 TYGYAAPEYVAT 277
T Y +PE +AT
Sbjct: 175 TPNYISPE-IAT 185
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 204
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 205 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G FG VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 19 LGGGQFGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 67
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+K I+RD A N L+ N+ K++DFGL++L G + APE +
Sbjct: 126 E--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 182
Query: 276 ATGNFYLLS 284
A F + S
Sbjct: 183 AYNKFSIKS 191
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 150
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 151 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 144 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ FL + KK ++RD A N +LD + K++DFGLA+
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 61
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 62 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 117
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 118 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 271 APEYV 275
APE +
Sbjct: 176 APEVI 180
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 75
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + S + IA AR
Sbjct: 76 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTAR 131
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA SH ++ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 271 APEYV 275
APE +
Sbjct: 190 APEVI 194
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 64
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 65 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 120
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 121 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 271 APEYV 275
APE +
Sbjct: 179 APEVI 183
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 64
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 65 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 120
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 121 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 271 APEYV 275
APE +
Sbjct: 179 APEVI 183
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 22 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 70
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL-------GPAGGESHVTTRVMGTYG 268
+K I+RD A N L+ N+ K++DFGL++L PAG + +
Sbjct: 129 E--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------- 178
Query: 269 YAAPEYVATGNFYLLS 284
+ APE +A F + S
Sbjct: 179 WTAPESLAYNKFSIKS 194
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL-------GPAGGESHVTTRVMGTYG 268
+K I+RD A N L+ N+ K++DFGL++L PAG + +
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------- 179
Query: 269 YAAPEYVATGNFYLLS 284
+ APE +A F + S
Sbjct: 180 WTAPESLAYNKFSIKS 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 59
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 115
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 271 APEYV 275
APE +
Sbjct: 174 APEVI 178
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 86
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 87 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 142
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 143 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 271 APEYV 275
APE +
Sbjct: 201 APEVI 205
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 87
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 88 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 143
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 271 APEYV 275
APE +
Sbjct: 202 APEVI 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 59
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 60 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 115
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA + SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 271 APEYV 275
APE +
Sbjct: 174 APEVI 178
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 75
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + S + IA AR
Sbjct: 76 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTAR 131
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA SH ++ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 271 APEYV 275
APE +
Sbjct: 190 APEVI 194
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 21/196 (10%)
Query: 91 FKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFL 149
K + ++G G FG V G + P K + VAIK L + + ++ SE + +
Sbjct: 16 IKIEKVIGVGEFGEVCSG----RLKVPGKREI--CVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA--IG 207
G+ HPN++ L G + K ++++ EYM+ GSL+ L R+N D R + +G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKN--------DGRFTVIQLVG 120
Query: 208 AARGLG--FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
RG+G + S+ ++RD A NIL++ N K+SDFG++++ E+ TTR
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 266 T-YGYAAPEYVATGNF 280
+ APE +A F
Sbjct: 181 IPIRWTAPEAIAYRKF 196
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 21/196 (10%)
Query: 91 FKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFL 149
K + ++G G FG V G + P K + VAIK L + + ++ SE + +
Sbjct: 10 IKIEKVIGVGEFGEVCSG----RLKVPGKREI--CVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA--IG 207
G+ HPN++ L G + K ++++ EYM+ GSL+ L R+N D R + +G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKN--------DGRFTVIQLVG 114
Query: 208 AARGLG--FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
RG+G + S+ ++RD A NIL++ N K+SDFG++++ E+ TTR
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 266 T-YGYAAPEYVATGNF 280
+ APE +A F
Sbjct: 175 IPIRWTAPEAIAYRKF 190
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 19 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 67
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+K I+RD A N L+ N+ K++DFGL++L G + APE +
Sbjct: 126 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 182
Query: 276 ATGNFYLLS 284
A F + S
Sbjct: 183 AYNKFSIKS 191
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LGEG FG+V+ + L+P+K M+VA+K L ++ +++Q E L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTKDK--MLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI------QP------LSWDIRLKI 204
+VK G C + L++V+EYM+ G L L P QP L L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A A G+ +L + + ++RD N L+ N KI DFG+++
Sbjct: 139 ASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 164
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 165 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 163
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 164 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 144 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 140
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 141 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 16 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 64
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 65 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 176
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 177 INYGTFTIKS 186
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 142
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 143 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 74
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 133 E--KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 19 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 67
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 126 E--KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRL 152
+ ++G G FG VY G + D G + A+K LN + G ++ +E +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 153 SHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
SHPN++ LLG C + L+V YM+ G L N F RN + P D+ + + A+G
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 137
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + KK ++RD A N +LD + K++DFGLA+
Sbjct: 138 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G G FG VYKG W D + V I K+ + + F+ +++EV L + H
Sbjct: 44 IGSGSFGTVYKGKWHGD-----------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N++ +GY +D L +V ++ + SL HL + Q + IA A+G+ +L
Sbjct: 93 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYL 148
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H K +I+RD K++NI L KI DFGLA + S + G+ + APE +
Sbjct: 149 HA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 23/199 (11%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE---SMQGFEE 141
K + ++F+ LG G FGRV+ L S+ G A+K L E ++ E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVH--------LIRSRHN-GRYYAMKVLKKEIVVRLKQVEH 52
Query: 142 WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
E L ++HP ++++ G + +++ ++ +Y++ G L + L + P++
Sbjct: 53 TNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA 112
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
++ + L +LH+ K +IYRD K NILLD N + KI+DFG AK P VT
Sbjct: 113 AEVCLA----LEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTY 161
Query: 262 RVMGTYGYAAPEYVATGNF 280
+ GT Y APE V+T +
Sbjct: 162 XLCGTPDYIAPEVVSTKPY 180
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 59
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 115
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 271 APEYV 275
APE +
Sbjct: 174 APEVI 178
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 181
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 182 INYGTFTIKS 191
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 29 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 77
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 78 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 189
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 190 INYGTFTIKS 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 22 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 70
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 71 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 182
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 183 INYGTFTIKS 192
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 30 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 78
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 79 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 190
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 191 INYGTFTIKS 200
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 87
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 88 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 143
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 271 APEYV 275
APE +
Sbjct: 202 APEVI 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 75
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 187
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 188 INYGTFTIKS 197
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E P+ V F A+ + ++G G FG V G + P K L VAIK L
Sbjct: 6 EDPNQAVHEFAKEIEAS-CITIERVIGAGEFGEVCSG----RLKLPGKRELP--VAIKTL 58
Query: 132 NPESMQGFEEWQS-----EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
G+ E Q E + +G+ HPN++ L G + K +++V EYM+ GSL+ L
Sbjct: 59 K----VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISD 244
+ + + +G RG+ G + S+ ++RD A NIL++ N K+SD
Sbjct: 115 KKNDGQFTVIQ-------LVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 167
Query: 245 FGLAKLGPAGGESHVTTRVMGT-YGYAAPEYVATGNF 280
FGL+++ E+ TTR + APE +A F
Sbjct: 168 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 26 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 75 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 186
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 187 INYGTFTIKS 196
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 181
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 182 INYGTFTIKS 191
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-----PESMQGFEEWQSEVNFLG 150
+G G FG VYKG W D VA+K LN P+ +Q F ++EV L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAF---KNEVGVLR 79
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ H N++ +GY +L +V ++ + SL +HL + + + IA A+
Sbjct: 80 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 135
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +LH K +I+RD K++NI L + KI DFGLA SH ++ G+ +
Sbjct: 136 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APEVI 198
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 23 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 71
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 72 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEA 183
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 184 INYGTFTIKS 193
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 75
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 187
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 188 INYGTFTIKS 197
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 22 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 70
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+K I+RD A N L+ N+ K++DFGL++L G + APE +
Sbjct: 129 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 185
Query: 276 ATGNFYLLS 284
A F + S
Sbjct: 186 AYNKFSIKS 194
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 31 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 79
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 80 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 191
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 192 INYGTFTIKS 201
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 74
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+K I+RD A N L+ N+ K++DFGL++L G + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 189
Query: 276 ATGNFYLLS 284
A F + S
Sbjct: 190 AYNKFSIKS 198
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 181
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 182 INYGTFTIKS 191
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LGEG FG+V+ + L P + M+VA+K L S +++Q E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQ-----------PLSWDIRLKIA 205
+V+ G C E + LL+V+EYM+ G L L P + PL L +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
A G+ +L + ++RD N L+ KI DFG+++ + V R M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 266 TYGYAAPEYVATGNF 280
+ PE + F
Sbjct: 200 PIRWMPPESILYRKF 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 74
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LGEG FG+V+ + L P + M+VA+K L S +++Q E L L H +
Sbjct: 49 LGEGAFGKVF--LAECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP---------SIQPLSWDIRLKIAIG 207
+V+ G C E + LL+V+EYM+ G L L P + P + +A+
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
+ G ++ + ++RD N L+ KI DFG+++ + V R M
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 268 GYAAPEYVATGNF 280
+ PE + F
Sbjct: 225 RWMPPESILYRKF 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 95 SLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL 152
+LG G FG VYKG WV P + + VAIK LN + + E+ E + +
Sbjct: 21 KVLGSGAFGTVYKGIWV------PEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP+LV+LLG C + LV + M G L ++ +I + L + A+G+
Sbjct: 75 DHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNI---GSQLLLNWCVQIAKGM 130
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+L E+++++RD A N+L+ + KI+DFGLA+L
Sbjct: 131 MYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 74
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 25 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 73
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 132 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 74
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 133 E--KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LGEG FG+V+ + L P + M+VA+K L S +++Q E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP---------SIQPLSWDIRLKIAIG 207
+V+ G C E + LL+V+EYM+ G L L P + P + +A+
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
+ G ++ + ++RD N L+ KI DFG+++ + V R M
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 268 GYAAPEYVATGNF 280
+ PE + F
Sbjct: 196 RWMPPESILYRKF 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 69
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 34 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 82
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 141 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 173
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 228 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 276
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q +S + L +A + + +L
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+R+ A N L+ N+ K++DFGL++L
Sbjct: 335 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 17 LGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 65
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 66 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+R+ +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEA 177
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 178 INYGTFTIKS 187
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 40 LGGGQYGEVYVGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 88
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + +V EYM G+L ++L R + + ++ + L +A + + +L
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYL 146
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+RD A N L+ N+ K++DFGL++L
Sbjct: 147 --EKKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLSHP 155
LGE FG+VYKG P+ VAIK L ++ EE++ E RL HP
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP---------------SIQPLSWDI 200
N+V LLG +D+ L +++ Y G L L R+P +++P + +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF-V 148
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
L I A G + S V+++D N+L+ N KISD GL + A +
Sbjct: 149 HLVAQIAA----GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 261 TRVMGTYGYAAPEYVATGNF 280
+ + APE + G F
Sbjct: 205 GNSLLPIRWMAPEAIMYGKF 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLSHP 155
LGE FG+VYKG P+ VAIK L ++ EE++ E RL HP
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP--SIQPLSWDIRLKIAIG------ 207
N+V LLG +D+ L +++ Y G L L R+P + D +K A+
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 208 --AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG 265
A G + S V+++D N+L+ N KISD GL + A + +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 266 TYGYAAPEYVATGNF 280
+ APE + G F
Sbjct: 193 PIRWMAPEAIMYGKF 207
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Query: 73 TPDLKVF----SFLDLKSATKNF---------KPDSLLGEGGFGRVYKGWVDDKTLAPSK 119
TP +K+F +F D A + F K + ++G G FG V G + P K
Sbjct: 4 TPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLK----LPGK 59
Query: 120 TGLGMVVAIKKLNPESMQGFEEWQ-----SEVNFLGRLSHPNLVKLLGYCWEDKELLLVY 174
+ VAIK L G+ E Q SE + +G+ HPN++ L G + ++++
Sbjct: 60 REI--FVAIKTLK----SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT 113
Query: 175 EYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNI 232
E+M+ GSL++ L + + + +G RG+ G + ++ ++RD A NI
Sbjct: 114 EFMENGSLDSFLRQNDGQFTVIQ-------LVGMLRGIAAGMKYLADMNYVHRDLAARNI 166
Query: 233 LLDGNYNAKISDFGLAKLGPAGGESHVTTRVMG---TYGYAAPEYVATGNF 280
L++ N K+SDFGL++ T +G + APE + F
Sbjct: 167 LVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL---NPESMQGFEEWQSEVNFLGRLS 153
LG GG VY T L + VAIK + E + + ++ EV+ +LS
Sbjct: 19 LGGGGMSTVYLA---------EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N+V ++ ED LV EY++ +L ++ S PLS D + G+
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIK 125
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHV--TTRVMGTYGYAA 271
H + ++++RD K NIL+D N KI DFG+AK A E+ + T V+GT Y +
Sbjct: 126 --HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK---ALSETSLTQTNHVLGTVQYFS 180
Query: 272 PE 273
PE
Sbjct: 181 PE 182
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + +M E++ E + +LSH
Sbjct: 15 IGSGQFGLVHLGYWLNKDK------------VAIKTIREGAMSE-EDFIEEAEVMMKLSH 61
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV+E+M+ G L ++L R + + + L + + G+ +
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 118
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 119 LE--EASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSL------LGEGGFGRVYKGWVDDKTLAPSKT 120
+G L T +L S + T++ P+ LG+G FG+VYK
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNK 59
Query: 121 GLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRG 180
++ A K ++ +S + E++ E++ L HPN+VKLL + + L ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 181 SLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA 240
+++ + +PL+ + L +LH + K+I+RD KA NIL + +
Sbjct: 120 AVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDI 174
Query: 241 KISDFGLAKLGPAGGESHVTTR--VMGTYGYAAPEYV 275
K++DFG++ A + R +GT + APE V
Sbjct: 175 KLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVV 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSL------LGEGGFGRVYKGWVDDKTLAPSKT 120
+G L T +L S + T++ P+ LG+G FG+VYK
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNK 59
Query: 121 GLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRG 180
++ A K ++ +S + E++ E++ L HPN+VKLL + + L ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 181 SLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA 240
+++ + +PL+ + L +LH + K+I+RD KA NIL + +
Sbjct: 120 AVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDI 174
Query: 241 KISDFGLAKLGPAGGESHVTTR--VMGTYGYAAPEYV 275
K++DFG++ A + R +GT + APE V
Sbjct: 175 KLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVV 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSL------LGEGGFGRVYKGWVDDKTLAPSKT 120
+G L T +L S + T++ P+ LG+G FG+VYK
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNK 59
Query: 121 GLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRG 180
++ A K ++ +S + E++ E++ L HPN+VKLL + + L ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 181 SLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA 240
+++ + +PL+ + L +LH + K+I+RD KA NIL + +
Sbjct: 120 AVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDI 174
Query: 241 KISDFGLAKLGPAGGESHVTTR--VMGTYGYAAPEYV 275
K++DFG++ A + R +GT + APE V
Sbjct: 175 KLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVV 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 267 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 315
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+R+ A N L+ N+ K++DFGL++L
Sbjct: 374 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G G V+ G+ + T VA+K L SM + + +E N + +L H
Sbjct: 21 LGAGQAGEVWMGYYNGHT----------KVAVKSLKQGSMSP-DAFLAEANLMKQLQHQR 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L ++ + ++ EYM+ GSL + F + PS L+ + L +A A G+ F+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
E+ I+RD +A+NIL+ + KI+DFGLA+L ++ T R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREGAKFPIKWTAPEA 181
Query: 275 VATGNFYLLS 284
+ G F + S
Sbjct: 182 INYGTFTIKS 191
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 91 FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVA-IKKLNPESMQGFEEWQS 144
F+P L LG+G FG+ K + +TG MV+ + + + E+ + F
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIK-------VTHRETGEVMVMKELIRFDEETQRTF---LK 56
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
EV + L HPN++K +G ++DK L + EY++ G+L + + S P W R+
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYP--WSQRVSF 113
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
A A G+ +LH+ +I+RD + N L+ N N ++DFGLA+L T+
Sbjct: 114 AKDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLM-----VDEKTQPE 166
Query: 265 GTYGYAAPE----YVATGNFYLLSAKFGN 289
G P+ Y GN Y ++ + N
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMIN 195
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEV 146
+ +F+ SLLGEG +G V T P+ G +VAIKK+ P F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKIEPFDKPLFALRTLREI 60
Query: 147 NFLGRLSHPNLVKLLGYCWED-----KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
L H N++ + D E+ ++ E MQ R S Q LS D
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHI 114
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL---------GP 252
R + LH S VI+RD K SN+L++ N + K+ DFGLA++ P
Sbjct: 115 QYFIYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 253 AGGESHVTTRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
G +S +T V T Y APE + T SAK+ ++V
Sbjct: 173 TGQQSGMTEXV-ATRWYRAPEVMLT------SAKYSRAMDV 206
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 24/199 (12%)
Query: 71 LETPDLKVFSFLDLKSATK-NFKPDSL-----LGEGGFGRVYKGWVDDKTLAPSKTGLGM 124
++TP L S +L K F D L LGEG FG+V + + K +
Sbjct: 3 MDTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMA--EAVGIDKDKPKEAV 60
Query: 125 VVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
VA+K L ++ + + SE+ + + H N++ LLG C +D L ++ EY +G+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 183 ENHLFRRNPSIQPLSWDIR------------LKIAIGAARGLGFLHTSEKKVIYRDFKAS 230
+L R P S+DI + ARG+ +L + +K I+RD A
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAAR 178
Query: 231 NILLDGNYNAKISDFGLAK 249
N+L+ N KI+DFGLA+
Sbjct: 179 NVLVTENNVMKIADFGLAR 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + +M E++ E + +LSH
Sbjct: 15 IGSGQFGLVHLGYWLNKDK------------VAIKTIREGAMSE-EDFIEEAEVMMKLSH 61
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV+E+M+ G L ++L R + + + L + + G+ +
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 118
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 119 LE--EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + +M E++ E + +LSH
Sbjct: 13 IGSGQFGLVHLGYWLNKDK------------VAIKTIREGAMSE-EDFIEEAEVMMKLSH 59
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV+E+M+ G L ++L R + + + L + + G+ +
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 116
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 117 LE--EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG G +G VY+G W + VA+K L ++M+ EE+ E + + HP
Sbjct: 225 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 273
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NLV+LLG C + ++ E+M G+L ++L R + Q ++ + L +A + + +L
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+K I+R+ A N L+ N+ K++DFGL++L
Sbjct: 332 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS-----EVNFLG 150
++G G FG VYKG L S + VAIK L G+ E Q E +G
Sbjct: 51 VIGAGEFGEVYKG-----MLKTSSGKKEVPVAIKTLK----AGYTEKQRVDFLGEAGIMG 101
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
+ SH N+++L G + K ++++ EYM+ G+L+ L ++ L +G R
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ-------LVGMLR 154
Query: 211 GL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
G+ G + + ++RD A NIL++ N K+SDFGL+++ E+ TT
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEV 146
+ +F+ SLLGEG +G V T P+ G +VAIKK+ P F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKIEPFDKPLFALRTLREI 60
Query: 147 NFLGRLSHPNLVKLLGYCWED-----KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
L H N++ + D E+ ++ E MQ R S Q LS D
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHI 114
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL---------GP 252
R + LH S VI+RD K SN+L++ N + K+ DFGLA++ P
Sbjct: 115 QYFIYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 253 AGGESHVTTRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
G +S +T V T Y APE + T SAK+ ++V
Sbjct: 173 TGQQSGMTEYV-ATRWYRAPEVMLT------SAKYSRAMDV 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + SM +++ E + +LSH
Sbjct: 35 IGSGQFGLVHLGYWLNKDK------------VAIKTIKEGSMSE-DDFIEEAEVMMKLSH 81
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV+E+M+ G L ++L R + + + L + + G+ +
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 138
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 139 LE--EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 172
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 92 KPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-----SEV 146
K + ++G G FG V +G + AP K VAIK L G+ E Q SE
Sbjct: 19 KIEEVIGAGEFGEVCRG----RLKAPGKKE--SCVAIKTLK----GGYTERQRREFLSEA 68
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +G+ HPN+++L G ++++ E+M+ G+L++ L + + +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LV 121
Query: 207 GAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G RG+ G + +E ++RD A NIL++ N K+SDFGL++ T +
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 265 G---TYGYAAPEYVATGNF 280
G + APE +A F
Sbjct: 182 GGKIPIRWTAPEAIAFRKF 200
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 72 ETPDLKVFSFLDLKSATK-NFKPDSL-----LGEGGFGRVYKGWVDDKTLAPSKTGLGMV 125
+TP L S +L K F D L LGEG FG+V + + K +
Sbjct: 58 DTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMA--EAVGIDKDKPKEAVT 115
Query: 126 VAIKKLNPESMQ-GFEEWQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLE 183
VA+K L ++ + + SE+ + + H N++ LLG C +D L ++ EY +G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 184 NHLFRRNPSIQPLSWDIR------------LKIAIGAARGLGFLHTSEKKVIYRDFKASN 231
+L R P S+DI + ARG+ +L + +K I+RD A N
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAARN 233
Query: 232 ILLDGNYNAKISDFGLAK 249
+L+ N KI+DFGLA+
Sbjct: 234 VLVTENNVMKIADFGLAR 251
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + +M E++ E + +LSH
Sbjct: 18 IGSGQFGLVHLGYWLNKDK------------VAIKTIREGAMSE-EDFIEEAEVMMKLSH 64
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV+E+M+ G L ++L R + + + L + + G+ +
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 121
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 122 LE--EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 92 KPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-----SEV 146
K + ++G G FG V +G + AP K VAIK L G+ E Q SE
Sbjct: 17 KIEEVIGAGEFGEVCRG----RLKAPGKKE--SCVAIKTLK----GGYTERQRREFLSEA 66
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +G+ HPN+++L G ++++ E+M+ G+L++ L + + +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LV 119
Query: 207 GAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G RG+ G + +E ++RD A NIL++ N K+SDFGL++ T +
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 265 G---TYGYAAPEYVATGNF 280
G + APE +A F
Sbjct: 180 GGKIPIRWTAPEAIAFRKF 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LGEG FG+V+ + L P + + +VA+K L S +++ E L L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQDKI--LVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI---------QPLSWDIRLKIAIG 207
+VK G C E L++V+EYM+ G L L P L+ L IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A G+ +L + + ++RD N L+ N KI DFG+++
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 76 LKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPE 134
+KV + + ++ + K +LG G FG V+KG W+ P + + V IK + +
Sbjct: 3 MKVLARIFKETELRKLK---VLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDK 53
Query: 135 S-MQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q F+ + +G L H ++V+LLG C L LV +Y+ GSL +H+ + ++
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 194 QP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
P L+W +++ A+G+ +L E +++R+ A N+LL +++DFG+A L
Sbjct: 113 GPQLLLNWGVQI------AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 251 GPAGGESHVTTRVMGTYGYAAPEYVATGNF 280
P + + + + A E + G +
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K + LG G FG V+ + T VA+K + P SM E + +E N
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANV 236
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ L H LVKL ++ + ++ E+M +GSL + L S QPL I I
Sbjct: 237 MKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI-- 293
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY- 267
A G+ F+ ++ I+RD +A+NIL+ + KI+DFGLA++ ++ T R +
Sbjct: 294 AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFP 348
Query: 268 -GYAAPEYVATGNFYLLS 284
+ APE + G+F + S
Sbjct: 349 IKWTAPEAINFGSFTIKS 366
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 48/230 (20%)
Query: 90 NFKPDSLLGEGGFGRVYKG--WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+FK L+G GGFG+V+K +D KT V+ K N E + EV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKT---------YVIKRVKYNNEKAE------REVK 56
Query: 148 FLGRLSHPNLVKLLGYCWE-----------------DKELLLVYEYMQRGSLENHLFRRN 190
L +L H N+V G CW+ K L + E+ +G+LE + +R
Sbjct: 57 ALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
+ L + L++ +G+ ++H+ KK+I RD K SNI L KI DFGL
Sbjct: 116 G--EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 251 GPAGGESHVTTRVMGTYGYAAPEYVATGNF------YLLSAKFGNVINVC 294
G+ R GT Y +PE +++ ++ Y L +++VC
Sbjct: 172 LKNDGKR---XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K + LG G FG V+ + T VA+K + P SM E + +E N
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANV 230
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ L H LVKL ++ + ++ E+M +GSL + L S QPL I I
Sbjct: 231 MKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI-- 287
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
A G+ F+ ++ I+RD +A+NIL+ + KI+DFGLA++G
Sbjct: 288 AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIK 334
Query: 269 YAAPEYVATGNFYLLS 284
+ APE + G+F + S
Sbjct: 335 WTAPEAINFGSFTIKS 350
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ EY +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N +I+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 96 LLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRLS 153
+LG G FG V+KG W+ P + + V IK + +S Q F+ + +G L
Sbjct: 38 VLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKIAIGAAR 210
H ++V+LLG C L LV +Y+ GSL +H+ + ++ P L+W +++ A+
Sbjct: 92 HAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 144
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ +L E +++R+ A N+LL +++DFG+A L P + + + +
Sbjct: 145 GMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 271 APEYVATGNF 280
A E + G +
Sbjct: 203 ALESIHFGKY 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K + LG G FG V+ + T VA+K + P SM E + +E N
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANV 63
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ L H LVKL ++ + ++ E+M +GSL + L S QPL I I
Sbjct: 64 MKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI-- 120
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY- 267
A G+ F+ ++ I+RD +A+NIL+ + KI+DFGLA++ ++ T R +
Sbjct: 121 AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFP 175
Query: 268 -GYAAPEYVATGNFYLLS 284
+ APE + G+F + S
Sbjct: 176 IKWTAPEAINFGSFTIKS 193
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEV 146
+ +F+ SLLGEG +G V T P+ G +VAIKK+ P F E+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPT----GEIVAIKKIEPFDKPLFALRTLREI 60
Query: 147 NFLGRLSHPNLVKLLGYCWED-----KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
L H N++ + D E+ ++ E MQ R S Q LS D
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDDHI 114
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL--GPAGGESHV 259
R + LH S VI+RD K SN+L++ N + K+ DFGLA++ A S
Sbjct: 115 QYFIYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 260 TTRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
T + G + A + L SAK+ ++V
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL----NPESMQ 137
LD+KS K ++ LGEG F VYK D T +VAIKK+ E+
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKAR-DKNT--------NQIVAIKKIKLGHRSEAKD 53
Query: 138 GFEEWQ-SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPL 196
G E+ L LSHPN++ LL + LV+++M+ LE + + + P
Sbjct: 54 GINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPS 112
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
+ + + +GL +LH + +++RD K +N+LLD N K++DFGLAK G
Sbjct: 113 HIKAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSP 165
Query: 257 SHVTTRVMGTYGYAAPEYVATGNFY 281
+ + T Y APE + Y
Sbjct: 166 NRAYXHQVVTRWYRAPELLFGARMY 190
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 78 VFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI---KKLNPE 134
+ S D + N++ +G+G F +V K TG + V I +LNP
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKV-------KLARHVLTGREVAVKIIDKTQLNPT 56
Query: 135 SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQ 194
S+Q + EV + L+HPN+VKL +K L LV EY G + ++L ++
Sbjct: 57 SLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMK 112
Query: 195 PLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAG 254
+ + + A + + +K +++RD KA N+LLDG+ N KI+DFG + G
Sbjct: 113 EKEARAKFRQIVSAVQ-----YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
Query: 255 GESHVTTRVMGTYGYAAPE 273
+ G+ YAAPE
Sbjct: 168 NKLDT---FCGSPPYAAPE 183
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ + E P+ V F A+ K + ++G G FG V G + P K + V
Sbjct: 22 DPETYEDPNRAVHQFAKELDAS-CIKIERVIGAGEFGEVCSG----RLKLPGKRDVA--V 74
Query: 127 AIKKLNPESMQGFEEWQ-----SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGS 181
AIK L G+ E Q E + +G+ HPN+V L G K +++V E+M+ G+
Sbjct: 75 AIKTLK----VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGL--GFLHTSEKKVIYRDFKASNILLDGNYN 239
L+ L + + + +G RG+ G + ++ ++RD A NIL++ N
Sbjct: 131 LDAFLRKHDGQFTVIQ-------LVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLV 183
Query: 240 AKISDFGLAKLGPAGGES-HVTTRVMGTYGYAAPEYVATGNF 280
K+SDFGL+++ E+ + TT + APE + F
Sbjct: 184 CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 61/243 (25%)
Query: 90 NFKPDSLLGEGGFGRVYKG--WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+FK L+G GGFG+V+K +D KT V+ K N E + EV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKT---------YVIRRVKYNNEKAE------REVK 57
Query: 148 FLGRLSHPNLVKLLGYCWE------------------------------DKELLLVYEYM 177
L +L H N+V G CW+ K L + E+
Sbjct: 58 ALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 178 QRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGN 237
+G+LE + +R + L + L++ +G+ ++H+ KK+I+RD K SNI L
Sbjct: 117 DKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDT 172
Query: 238 YNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVATGNF------YLLSAKFGNVI 291
KI DFGL G+ TR GT Y +PE +++ ++ Y L ++
Sbjct: 173 KQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Query: 292 NVC 294
+VC
Sbjct: 230 HVC 232
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-----SMQGFEEWQS 144
N++ LGEG FG+V + T G VA+K +N + MQG +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQG--RIER 62
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E+++L L HP+++KL E+++V EY L +++ +R+ + + +I
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQI 121
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
I A + K+++RD K N+LLD + N KI+DFGL+ + G +
Sbjct: 122 -ISAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 172
Query: 265 GTYGYAAPEYVATGNFY 281
G+ YAAPE V +G Y
Sbjct: 173 GSPNYAAPE-VISGKLY 188
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-----SMQGFEEWQS 144
N++ LGEG FG+V + T G VA+K +N + MQG +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQG--RIER 63
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E+++L L HP+++KL E+++V EY L +++ +R+ + + +I
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQI 122
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
I A + K+++RD K N+LLD + N KI+DFGL+ + G +
Sbjct: 123 -ISAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 173
Query: 265 GTYGYAAPEYVATGNFY 281
G+ YAAPE V +G Y
Sbjct: 174 GSPNYAAPE-VISGKLY 189
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 33/199 (16%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
K + + ++G G FG V K K VAIK++ ES + + + E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD-----------VAIKQIESESER--KAFIVELRQ 55
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP-----SIQPLSWDIRLK 203
L R++HPN+VKL G C + LV EY + GSL N L P + +SW
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW----- 108
Query: 204 IAIGAARGLGFLHTSEKK-VIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTT 261
+ ++G+ +LH+ + K +I+RD K N+LL G KI DFG A ++H+T
Sbjct: 109 -CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTN 163
Query: 262 RVMGTYGYAAPEYVATGNF 280
G+ + APE N+
Sbjct: 164 N-KGSAAWMAPEVFEGSNY 181
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LGEG FG V +G + + T L + V KL+ S + EE+ SE + SHP
Sbjct: 41 ILGEGEFGSVMEGNLKQE----DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 156 NLVKLLGYCWEDK-----ELLLVYEYMQRGSLENHLFRRNPSIQP--LSWDIRLKIAIGA 208
N+++LLG C E + +++ +M+ G L +L P + LK +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A G+ +L S + ++RD A N +L + ++DFGL+K
Sbjct: 157 ALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-----SMQGFEEWQS 144
N++ LGEG FG+V + T G VA+K +N + MQG +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQG--RIER 57
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E+++L L HP+++KL E+++V EY L +++ +R+ + + +I
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQI 116
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
I A + K+++RD K N+LLD + N KI+DFGL+ + G +
Sbjct: 117 -ISAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 167
Query: 265 GTYGYAAPEYVATGNFY 281
G+ YAAPE V +G Y
Sbjct: 168 GSPNYAAPE-VISGKLY 183
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-----SMQGFEEWQS 144
N++ LGEG FG+V + T G VA+K +N + MQG +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQG--RIER 53
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E+++L L HP+++KL E+++V EY L +++ +R+ + + +I
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQI 112
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
I A + K+++RD K N+LLD + N KI+DFGL+ + G +
Sbjct: 113 -ISAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 163
Query: 265 GTYGYAAPEYVATGNFY 281
G+ YAAPE V +G Y
Sbjct: 164 GSPNYAAPE-VISGKLY 179
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 27/191 (14%)
Query: 65 SPNGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLG 123
SP+G E P+ + L FK +LG G FG VYKG W+ P +
Sbjct: 2 SPSG---EAPNQALLRIL----KETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVK 48
Query: 124 MVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
+ VAIK+L S + +E E + + +P++ +LLG C + L+ + M G L
Sbjct: 49 IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCL 107
Query: 183 ENHLFRRNPSIQP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN 239
+++ +I L+W +++ A+G+ +L ++++++RD A N+L+ +
Sbjct: 108 LDYVREHKDNIGSQYLLNWCVQI------AKGMNYL--EDRRLVHRDLAARNVLVKTPQH 159
Query: 240 AKISDFGLAKL 250
KI+DFGLAKL
Sbjct: 160 VKITDFGLAKL 170
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 27/201 (13%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL--NPESMQGFEEWQSEVNFLGRLS 153
L+GEG +G V K D G +VAIKK + + + E+ L +L
Sbjct: 32 LVGEGSYGMVMKCRNKDT---------GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLEN-HLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H NLV LL C + K LV+E++ L++ LF L + + K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGI 137
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
GF H+ +I+RD K NIL+ + K+ DFG A+ A GE V + T Y AP
Sbjct: 138 GFCHSH--NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
Query: 273 EYVATGNFYLLSAKFGNVINV 293
E + K+G ++V
Sbjct: 194 ELLVG------DVKYGKAVDV 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 33/199 (16%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
K + + ++G G FG V K K VAIK++ ES + + + E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-----------VAIKQIESESER--KAFIVELRQ 54
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNP-----SIQPLSWDIRLK 203
L R++HPN+VKL G C + LV EY + GSL N L P + +SW
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW----- 107
Query: 204 IAIGAARGLGFLHTSEKK-VIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTT 261
+ ++G+ +LH+ + K +I+RD K N+LL G KI DFG A ++H+T
Sbjct: 108 -CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTN 162
Query: 262 RVMGTYGYAAPEYVATGNF 280
G+ + APE N+
Sbjct: 163 N-KGSAAWMAPEVFEGSNY 180
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 97 LGEGGFGRVYKG-WVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+G G FG V+ G W++ DK VAIK + +M E++ E + +LSH
Sbjct: 16 IGSGQFGLVHLGYWLNKDK------------VAIKTIREGAMSE-EDFIEEAEVMMKLSH 62
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
P LV+L G C E + LV E+M+ G L ++L R + + + L + + G+ +
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAY 119
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L E VI+RD A N L+ N K+SDFG+ +
Sbjct: 120 LE--EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 77 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 20 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 74 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + +V + +
Sbjct: 128 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 186 APESLKTRTF 195
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 28 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 29 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHL---------FRRNPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L F NPS P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ Y +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG+VYK G + A K + +S + E++ E+ L HP
Sbjct: 19 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-----PSIQPLSWDIRLKIAIGAARG 211
+VKLLG + D +L ++ E+ G+++ + + P IQ +
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEA 121
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR--VMGTYGY 269
L FLH+ K++I+RD KA N+L+ + +++DFG++ A + R +GT +
Sbjct: 122 LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYW 175
Query: 270 AAPEYV 275
APE V
Sbjct: 176 MAPEVV 181
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 20 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 74 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + +V + +
Sbjct: 128 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 186 APESLKTRTF 195
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 70 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 123
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + +V + +
Sbjct: 124 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 182 APESLKTRTF 191
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG+VYK G + A K + +S + E++ E+ L HP
Sbjct: 27 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-----PSIQPLSWDIRLKIAIGAARG 211
+VKLLG + D +L ++ E+ G+++ + + P IQ +
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEA 129
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR--VMGTYGY 269
L FLH+ K++I+RD KA N+L+ + +++DFG++ A + R +GT +
Sbjct: 130 LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYW 183
Query: 270 AAPEYV 275
APE V
Sbjct: 184 MAPEVV 189
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 21 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI---KKLNPESMQGFEEWQSEV 146
N++ +G+G F +V K TG + + I +LNP S+Q + EV
Sbjct: 13 NYRLLKTIGKGNFAKV-------KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREV 62
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L+HPN+VKL +K L L+ EY G + ++L ++ + + +
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIV 121
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
A + + +K++++RD KA N+LLD + N KI+DFG + GG+ G+
Sbjct: 122 SAVQ-----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGS 173
Query: 267 YGYAAPE 273
YAAPE
Sbjct: 174 PPYAAPE 180
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 70 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 123
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + +V + +
Sbjct: 124 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 182 APESLKTRTF 191
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 26 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 80 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 133
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + +V + +
Sbjct: 134 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 192 APESLKTRTF 201
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 28/194 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
LG G FG V+ G+ ++ T VA+K L P +M Q F E E N + L H
Sbjct: 21 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTMSVQAFLE---EANLMKTLQH 67
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPLSWDIRLKIAIGAARGL 212
LV+L ++ + ++ EYM +GSL + L + P D +IA G A
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA--- 124
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYA 270
+ K I+RD +A+N+L+ + KI+DFGLA++ ++ T R + +
Sbjct: 125 ---YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE---DNEYTAREGAKFPIKWT 178
Query: 271 APEYVATGNFYLLS 284
APE + G F + S
Sbjct: 179 APEAINFGCFTIKS 192
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + L K VA+K L ++ + + SE+ + + H
Sbjct: 25 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQP---LSWDIRL 202
N++ LLG C +D L ++ EY +G+L +L R NPS P LS +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A ARG+ +L + KK I+RD A N+L+ + KI+DFGLA+
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 78 VFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI---KKLNPE 134
+ S D + N++ +G+G F +V K TG + + I +LNP
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKV-------KLARHILTGREVAIKIIDKTQLNPT 56
Query: 135 SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQ 194
S+Q + EV + L+HPN+VKL +K L L+ EY G + ++L ++
Sbjct: 57 SLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMK 112
Query: 195 PLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAG 254
+ + + A + + +K++++RD KA N+LLD + N KI+DFG + G
Sbjct: 113 EKEARSKFRQIVSAVQ-----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
Query: 255 GESHVTTRVMGTYGYAAPE 273
G+ G YAAPE
Sbjct: 168 GKLDA---FCGAPPYAAPE 183
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 23/197 (11%)
Query: 85 KSATKNFKPDS---LLGE-GGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+ T++ P+ ++GE G FG+VYK ++ A K ++ +S + E
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKA---------QNKETSVLAAAKVIDTKSEEELE 52
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
++ E++ L HPN+VKLL + + L ++ E+ G+++ + +PL+
Sbjct: 53 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQ 109
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ L +LH + K+I+RD KA NIL + + K++DFG++ + +
Sbjct: 110 IQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQ 164
Query: 261 TR--VMGTYGYAAPEYV 275
R +GT + APE V
Sbjct: 165 RRDSFIGTPYWMAPEVV 181
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 71 LETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK 130
L+ PD+ F D K F +G G FG VY + + S+ VVAIKK
Sbjct: 38 LKDPDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFA----RDVRNSE-----VVAIKK 86
Query: 131 LNPESMQGFEEWQS---EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLF 187
++ Q E+WQ EV FL +L HPN ++ G + LV EY GS + L
Sbjct: 87 MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLE 145
Query: 188 RRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGL 247
+Q + + GA +GL +LH+ +I+RD KA NILL K+ DFG
Sbjct: 146 VHKKPLQEVEI---AAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 248 AK-LGPAGGESHVTTRVMGTYGYAAPEYV 275
A + PA +GT + APE +
Sbjct: 201 ASIMAPANX-------FVGTPYWMAPEVI 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 68 GQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVV 126
G + E P+ + L FK +LG G FG VYKG W+ P + + V
Sbjct: 1 GSMGEAPNQALLRIL----KETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPV 50
Query: 127 AIKKLN-PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
AIK+L S + +E E + + +P++ +LLG C + L+ + M G L ++
Sbjct: 51 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDY 109
Query: 186 LFRRNPSIQP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ +I L+W +++ A+G+ +L ++++++RD A N+L+ + KI
Sbjct: 110 VREHKDNIGSQYLLNWCVQI------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 243 SDFGLAKL 250
+DFGLAKL
Sbjct: 162 TDFGLAKL 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 68 GQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVV 126
G + E P+ + L FK +LG G FG VYKG W+ P + + V
Sbjct: 1 GSMGEAPNQALLRIL----KETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPV 50
Query: 127 AIKKLN-PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
AIK+L S + +E E + + +P++ +LLG C + L+ + M G L ++
Sbjct: 51 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDY 109
Query: 186 LFRRNPSIQP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ +I L+W +++ A+G+ +L ++++++RD A N+L+ + KI
Sbjct: 110 VREHKDNIGSQYLLNWCVQI------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKI 161
Query: 243 SDFGLAKL 250
+DFGLAKL
Sbjct: 162 TDFGLAKL 169
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRL-SH 154
LGEG FG+V + + K + VA+K L ++ + + SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR------------L 202
N++ LLG C +D L ++ Y +G+L +L R P S+DI +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
ARG+ +L + +K I+RD A N+L+ N KI+DFGLA+
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 133 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 128 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 69 QILETPDLKVFSFLDLKSATKN----FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSK 119
+I+E+ + ++F+D N F ++L LG G FG+V V+ K
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV----VEATAFGLGK 72
Query: 120 TGLGMVVAIKKLNPESMQGFEE-WQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYM 177
+ VA+K L + +E SE+ + L H N+V LLG C +L++ EY
Sbjct: 73 EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 178 QRGSLENHLFRR---------NPSIQP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYR 225
G L N L R+ NPS P LS L + A+G+ FL + K I+R
Sbjct: 133 CYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHR 190
Query: 226 DFKASNILLDGNYNAKISDFGLAK 249
D A N+LL + AKI DFGLA+
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
D ++G+G FG VY G D+ + + + I + MQ E + E + L+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-----MQQVEAFLREGLLMRGLN 80
Query: 154 HPNLVKLLGYCWEDKEL-LLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HPN++ L+G + L ++ YM G L F R+P P D+ + + ARG+
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ--FIRSPQRNPTVKDL-ISFGLQVARGM 137
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+L +E+K ++RD A N +LD ++ K++DFGLA+
Sbjct: 138 EYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 61 VEEASPNGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSK 119
VE +P+G E P+ + L FK +LG G FG VYKG W+ P
Sbjct: 28 VEPLTPSG---EAPNQALLRIL----KETEFKKIKVLGSGAFGTVYKGLWI------PEG 74
Query: 120 TGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQ 178
+ + VAI +L S + +E E + + +P++ +LLG C + L+ + M
Sbjct: 75 EKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 133
Query: 179 RGSLENHLFRRNPSIQP---LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD 235
G L +++ +I L+W +++ A+G+ +L ++++++RD A N+L+
Sbjct: 134 FGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL--EDRRLVHRDLAARNVLVK 185
Query: 236 GNYNAKISDFGLAKL 250
+ KI+DFGLAKL
Sbjct: 186 TPQHVKITDFGLAKL 200
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 152 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 21/175 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESH 258
A+G+ +L ++++++RD A N+L+ + KI+DFGLAK LG E H
Sbjct: 121 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 97 LGEGGFGRV----YKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRL 152
LG G FG V +KG D VA+K + SM E +Q E + +L
Sbjct: 16 LGSGQFGVVKLGKWKGQYD--------------VAVKMIKEGSMSEDEFFQ-EAQTMMKL 60
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
SHP LVK G C ++ + +V EY+ G L N+L ++P L++ G+
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ---LLEMCYDVCEGM 117
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
FL + + I+RD A N L+D + K+SDFG+ +
Sbjct: 118 AFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 70 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 123
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + V + +
Sbjct: 124 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 182 APESLKTRTF 191
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 28/194 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
LG G FG V+ G+ ++ T VA+K L P +M Q F E E N + L H
Sbjct: 20 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTMSVQAFLE---EANLMKTLQH 66
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPLSWDIRLKIAIGAARGL 212
LV+L +++ + ++ E+M +GSL + L + P D +IA G A
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA--- 123
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYA 270
+ K I+RD +A+N+L+ + KI+DFGLA++ ++ T R + +
Sbjct: 124 ---YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE---DNEYTAREGAKFPIKWT 177
Query: 271 APEYVATGNFYLLS 284
APE + G F + S
Sbjct: 178 APEAINFGCFTIKS 191
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRLS 153
LG+G FG V +G D APS G + VA+K L P+ + + +++ EVN + L
Sbjct: 26 LGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPS--IQPLSWDIRLKIAIGAARG 211
H NL++L G + +V E GSL + L + + LS + A+ A G
Sbjct: 80 HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEG 133
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT-YGYA 270
+G+L + K+ I+RD A N+LL KI DFGL + P + V + +
Sbjct: 134 MGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 271 APEYVATGNF 280
APE + T F
Sbjct: 192 APESLKTRTF 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 21/175 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESH 258
A+G+ +L ++++++RD A N+L+ + KI+DFGLAK LG E H
Sbjct: 137 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 165
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 166 VTLWYRAPEILLGCKYY 182
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 91 FKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLG 150
K D +G G F VYKG + T+ + L +KL Q F+E E L
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL----QDRKLTKSERQRFKE---EAEXLK 80
Query: 151 RLSHPNLVKLLGYCWED-----KELLLVYEYMQRGSLENHLFR-RNPSIQPL-SWDIRLK 203
L HPN+V+ WE K ++LV E G+L+ +L R + I+ L SW ++
Sbjct: 81 GLQHPNIVRFYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI- 138
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGGESHVTTR 262
+GL FLHT +I+RD K NI + G + KI D GLA L A
Sbjct: 139 -----LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKA 189
Query: 263 VMGTYGYAAPE 273
V+GT + APE
Sbjct: 190 VIGTPEFXAPE 200
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 128 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 117
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 118 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 173
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 174 LWYRAPEILLGCKYY 188
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 167 LWYRAPEILLGCKYY 181
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 167 LWYRAPEILLGCKYY 181
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 167 LWYRAPEILLGXKYY 181
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 57
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 114
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 115 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 170
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 171 LWYRAPEILLGCKYY 185
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 117
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 118 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 173
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 174 LWYRAPEILLGXKYY 188
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 111 QLLQGLSFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 167 LWYRAPEILLGCKYY 181
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ S++ F ++ + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 165
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 166 VTLWYRAPEILLGCKYY 182
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-----SEVNF 148
+ ++G G G V G + P + + VAIK L G+ E Q SE +
Sbjct: 54 EKIIGSGDSGEVCYG----RLRVPGQRDVP--VAIKALK----AGYTERQRRDFLSEASI 103
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+G+ HPN+++L G + ++V EYM+ GSL+ L + + +G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-------LVGM 156
Query: 209 ARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMG 265
RG+ G + S+ ++RD A N+L+D N K+SDFGL++ L ++ TT
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 266 TYGYAAPEYVATGNF 280
+ APE +A F
Sbjct: 217 PIRWTAPEAIAFRTF 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 123
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 124 ----AEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ S++ F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 60 GVEEASPNGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSK 119
GV AS N + D+ V + + A + LG+G FG VY+G +
Sbjct: 20 GVLYASVNPEYFSAADVYVPD--EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE 77
Query: 120 TGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQ 178
T VAIK +N SM+ E+ +E + + + ++V+LLG + + L++ E M
Sbjct: 78 TR----VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMT 133
Query: 179 RGSLENHL------FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI 232
RG L+++L NP + P S +++A A G+ +L+ + K ++RD A N
Sbjct: 134 RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNC 191
Query: 233 LLDGNYNAKISDFGLAK 249
++ ++ KI DFG+ +
Sbjct: 192 MVAEDFTVKIGDFGMTR 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LG+GG+G+V++ V T A + M V K + + + ++E N L + HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+V L+ +L L+ EY+ G L L R ++ + +I++ LG L
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA----LGHL 137
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H +K +IYRD K NI+L+ + K++DFGL K G VT GT Y APE +
Sbjct: 138 H--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEIL 193
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LG+GG+G+V++ V T A + M V K + + + ++E N L + HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+V L+ +L L+ EY+ G L L R ++ + +I++ LG L
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA----LGHL 137
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H +K +IYRD K NI+L+ + K++DFGL K G VT GT Y APE +
Sbjct: 138 H--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEIL 193
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ S++ F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ S++ F ++ + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 166
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 167 VTLWYRAPEILLGCKYY 183
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 33/199 (16%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-----SEVNF 148
+ ++G G G V G + P + + VAIK L G+ E Q SE +
Sbjct: 54 EKIIGSGDSGEVCYG----RLRVPGQRDVP--VAIKALK----AGYTERQRRDFLSEASI 103
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+G+ HPN+++L G + ++V EYM+ GSL+ L + + +G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-------LVGM 156
Query: 209 ARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
RG+ G + S+ ++RD A N+L+D N K+SDFGL+++ ++ TT T
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----T 212
Query: 267 YG-----YAAPEYVATGNF 280
G + APE +A F
Sbjct: 213 GGKIPIRWTAPEAIAFRTF 231
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 142 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 74 PDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP 133
PD+ F D K F +G G FG VY + + S+ VVAIKK++
Sbjct: 2 PDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFA----RDVRNSE-----VVAIKKMSY 50
Query: 134 ESMQGFEEWQS---EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN 190
Q E+WQ EV FL +L HPN ++ G + LV EY GS + L
Sbjct: 51 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK 109
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK- 249
+Q + + GA +GL +LH+ +I+RD KA NILL K+ DFG A
Sbjct: 110 KPLQEVEI---AAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 250 LGPAGGESHVTTRVMGTYGYAAPEYV 275
+ PA +GT + APE +
Sbjct: 165 MAPANX-------FVGTPYWMAPEVI 183
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 142 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 143 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE-WQSEVNF 148
N + LG G FG+V V+ K + VA+K L + +E SE+
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 149 LGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI------QPLSWDIR 201
+ L H N+V LLG C +L++ EY G L N L R+ + +PL
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
L + A+G+ FL + K I+RD A N+LL + AKI DFGLA+
Sbjct: 155 LHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 143 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 140 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 149 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 136 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 134 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 69 QILETPDLKVFSFLDLKSATKN----FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSK 119
+I+E+ + ++F+D N F ++L LG G FG+V V+ K
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV----VEATAFGLGK 72
Query: 120 TGLGMVVAIKKLNPESMQGFEE-WQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYM 177
+ VA+K L + +E SE+ + L H N+V LLG C +L++ EY
Sbjct: 73 EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 178 QRGSLENHLFRRNPSI------QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASN 231
G L N L R+ + +PL L + A+G+ FL + K I+RD A N
Sbjct: 133 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARN 190
Query: 232 ILLDGNYNAKISDFGLAK 249
+LL + AKI DFGLA+
Sbjct: 191 VLLTNGHVAKIGDFGLAR 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 139 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSY 108
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 164
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 165 VTLWYRAPEILLGCKYY 181
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE-WQSEVN 147
+N + +LG G FG+V ++ SKTG+ + VA+K L ++ E SE+
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 148 FLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL-------------------F 187
+ +L SH N+V LLG C + L++EY G L N+L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 188 RRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGL 247
+ L+++ L A A+G+ FL K ++RD A N+L+ KI DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 248 AK 249
A+
Sbjct: 219 AR 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +L G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N ++ ++ KI DFG+ +
Sbjct: 149 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 164
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 165 VTLWYRAPEILLGCKYY 181
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +L G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +L G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFGLAKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 131 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLG-MVVAIKKLNPE-SMQGFEEWQSEV 146
KN LGEG FG+V K T K G VA+K L S + SE
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF 77
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR----------------- 189
N L +++HP+++KL G C +D LLL+ EY + GSL L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 190 ---NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
+P + L+ + A ++G+ +L +E K+++RD A NIL+ KISDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 247 LAK 249
L++
Sbjct: 196 LSR 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 164
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 165 VTLWYRAPEILLGCKYY 181
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLG-MVVAIKKLNPE-SMQGFEEWQSEV 146
KN LGEG FG+V K T K G VA+K L S + SE
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF 77
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR----------------- 189
N L +++HP+++KL G C +D LLL+ EY + GSL L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 190 ---NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
+P + L+ + A ++G+ +L +E K+++RD A NIL+ KISDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 247 LAK 249
L++
Sbjct: 196 LSR 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 164
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 165 VTLWYRAPEILLGCKYY 181
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 166
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 167 VTLWYRAPEILLGCKYY 183
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 166
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 167 VTLWYRAPEILLGCKYY 183
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVN 147
K K +G+G FG V G G VA+K + N + Q F +E +
Sbjct: 193 KELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQAF---LAEAS 238
Query: 148 FLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +L H NLV+LLG E+K L +V EYM +GSL ++L R S+ L D LK ++
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSL 296
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + ++RD A N+L+ + AK+SDFGL K
Sbjct: 297 DVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 55
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 112
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 113 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 168
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 169 VTLWYRAPEILLGCKYY 185
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 164
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 165 VTLWYRAPEILLGCKYY 181
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEV 165
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 166 VTLWYRAPEILLGCKYY 182
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+ K L+ E+ E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 166
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 167 LWYRAPEILLGCKYY 181
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+ K L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 165
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 166 VTLWYRAPEILLGCKYY 182
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G + T
Sbjct: 112 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVT 167
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 168 LWYRAPEILLGCKYY 182
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 166
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 167 VTLWYRAPEILLGCKYY 183
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 22/188 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE---EWQSEVNFLGRLS 153
LG G FG+V G G VA+K LN + ++ + + + E+ L
Sbjct: 24 LGVGTFGKVKVG---------KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HP+++KL ++ +V EY+ G L +++ + + S + +I G+
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----SGVD 130
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+ H V++RD K N+LLD + NAKI+DFGL+ + G G+ YAAPE
Sbjct: 131 YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRXSCGSPNYAAPE 185
Query: 274 YVATGNFY 281
V +G Y
Sbjct: 186 -VISGRLY 192
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVN 147
K K +G+G FG V G G VA+K + N + Q F +E +
Sbjct: 21 KELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQAF---LAEAS 66
Query: 148 FLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +L H NLV+LLG E+K L +V EYM +GSL ++L R S+ L D LK ++
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSL 124
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + ++RD A N+L+ + AK+SDFGL K
Sbjct: 125 DVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEV 146
+NF+ +GEG +G VYK G VVA+KK L+ E+ E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+GL F H+ +V++RD K N+L++ K++DFGLA+ G + T
Sbjct: 110 QLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVT 165
Query: 267 YGYAAPEYVATGNFY 281
Y APE + +Y
Sbjct: 166 LWYRAPEILLGCKYY 180
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVN 147
FK +LG G FG VYKG W+ P + + VAIK+L S + +E E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQP---LSWDIRLKI 204
+ + +P++ +LLG C + L+ + M G L +++ +I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
A+G+ +L ++++++RD A N+L+ + KI+DFG AKL
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVN 147
K K +G+G FG V G D + G VA+K + N + Q F +E +
Sbjct: 12 KELKLLQTIGKGEFGDVMLG--DYR---------GNKVAVKCIKNDATAQAF---LAEAS 57
Query: 148 FLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +L H NLV+LLG E+K L +V EYM +GSL ++L R S+ L D LK ++
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSL 115
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + ++RD A N+L+ + AK+SDFGL K
Sbjct: 116 DVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEVNFLGRLSH 154
+GEG +G VYK +K G +VA+K+ L+ E E++ L L H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI-GAARGLG 213
PN+V L+ ++ L LV+E+M++ L+ L +Q D ++KI + RG+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA 133
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H + ++++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 134 --HCHQHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 274 YVATGNFYLLSAKFGNV 290
+ Y S ++
Sbjct: 190 VLMGSKKYSTSVDIWSI 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEVNFLGRLSH 154
+GEG +G VYK +K G +VA+K+ L+ E E++ L L H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI-GAARGLG 213
PN+V L+ ++ L LV+E+M++ L+ L +Q D ++KI + RG+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVA 133
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H + ++++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 134 --HCHQHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 274 YVATGNFYLLSAKFGNV 290
+ Y S ++
Sbjct: 190 VLMGSKKYSTSVDIWSI 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 61
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY RG + L Q LS +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQR 114
Query: 204 IA---IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
A A L + H+ K+VI+RD K N+LL KI+DFG + P+
Sbjct: 115 TATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---- 168
Query: 261 TRVMGTYGYAAPEYV 275
T + GT Y PE +
Sbjct: 169 TTLCGTLDYLPPEMI 183
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 92 KPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-----SEV 146
K + ++G G FG V G + P K + VAIK L G+ E Q SE
Sbjct: 10 KIEQVIGAGEFGEVCSGHLK----LPGKREI--FVAIKTLK----SGYTEKQRRDFLSEA 59
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +G+ HPN++ L G + ++++ E+M+ GSL++ L + + + +
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ-------LV 112
Query: 207 GAARGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G RG+ G + ++ ++R A NIL++ N K+SDFGL++ T +
Sbjct: 113 GMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 172
Query: 265 G---TYGYAAPEYVATGNF 280
G + APE + F
Sbjct: 173 GGKIPIRWTAPEAIQYRKF 191
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVN 147
K K +G+G FG V G G VA+K + N + Q F +E +
Sbjct: 6 KELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQAF---LAEAS 51
Query: 148 FLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ +L H NLV+LLG E+K L +V EYM +GSL ++L R S+ L D LK ++
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSL 109
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +L + ++RD A N+L+ + AK+SDFGL K
Sbjct: 110 DVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G +T VAIK +N SM+ E+ +E + + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L++ E M RG L+++L NP + P S +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ + K ++RD A N + ++ KI DFG+ +
Sbjct: 136 DGMAYLNAN--KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 69 QILETPDLKVFSFLDLKSATKN----FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSK 119
+I+E+ + ++F+D N F ++L LG G FG+V V+ K
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV----VEATAFGLGK 72
Query: 120 TGLGMVVAIKKLNPESMQGFEE-WQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYM 177
+ VA+K L + +E SE+ + L H N+V LLG C +L++ EY
Sbjct: 73 EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 178 QRGSLENHLFRRNPSIQP----------LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDF 227
G L N L R++ ++ LS L + A+G+ FL + K I+RD
Sbjct: 133 CYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKNCIHRDV 190
Query: 228 KASNILLDGNYNAKISDFGLAK 249
A N+LL + AKI DFGLA+
Sbjct: 191 AARNVLLTNGHVAKIGDFGLAR 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQS 144
+ +NF+ +GEG +G VYK G VVA+KK L+ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
E++ L L+HPN+VKLL + +L LV+E++ + + F ++ + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKK---FMDASALTGIPLPLIKSY 111
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+GL F H+ +V++RD K N+L++ K++DFGLA+ G +
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEV 167
Query: 265 GTYGYAAPEYVATGNFY 281
T Y APE + +Y
Sbjct: 168 VTLWYRAPEILLGCKYY 184
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 16 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 64
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 65 LVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 118
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 119 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIK 170
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 171 WTAPEAALYGRFTIKS 186
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRL 152
+LG+G FG+V + + G + AIK L + + E E L L
Sbjct: 26 VLGKGSFGKV---------MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 153 SHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
P + L C++ + L V EY+ G L H+ + +P + +I+IG
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG---- 132
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR-VMGTYGYA 270
L FLH ++ +IYRD K N++LD + KI+DFG+ K G VTTR GT Y
Sbjct: 133 LFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDYI 187
Query: 271 APEYVA 276
APE +A
Sbjct: 188 APEIIA 193
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
+ S ++++ +G G +GR K + G ++ K+L+ SM E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQM 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
SEVN L L HPN+V+ + + L +V EY + G L + + + Q L +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 200 IRLKIAIGAARGLGFLHTSEK---KVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L++ L H V++RD K +N+ LDG N K+ DFGLA++ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHD 169
Query: 257 SHVTTRVMGTYGYAAPE 273
+ +GT Y +PE
Sbjct: 170 TSFAKTFVGTPYYMSPE 186
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ KK ++RD A N ++ ++ KI DFG+ +
Sbjct: 140 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 23 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 71
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 72 LVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLV----DMSAQIASGMA- 125
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 126 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 177
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 178 WTAPEAALYGRFTIKS 193
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 69 QILETPDLKVFSFLDLKSATKN----FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSK 119
+I+E+ + ++F+D N F ++L LG G FG+V V+ K
Sbjct: 2 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV----VEATAFGLGK 57
Query: 120 TGLGMVVAIKKLNPESMQGFEE-WQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYM 177
+ VA+K L + +E SE+ + L H N+V LLG C +L++ EY
Sbjct: 58 EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 117
Query: 178 QRGSLENHLFRR-----NPSI--------------QPLSWDIRLKIAIGAARGLGFLHTS 218
G L N L R+ PS+ +PL L + A+G+ FL +
Sbjct: 118 CYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--A 175
Query: 219 EKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K I+RD A N+LL + AKI DFGLA+
Sbjct: 176 SKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
+ S ++++ +G G +GR K + G ++ K+L+ SM E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQM 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
SEVN L L HPN+V+ + + L +V EY + G L + + + Q L +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 200 IRLKIAIGAARGLGFLHTSEK---KVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L++ L H V++RD K +N+ LDG N K+ DFGLA++ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHD 169
Query: 257 SHVTTRVMGTYGYAAPE 273
+ +GT Y +PE
Sbjct: 170 TSFAKAFVGTPYYMSPE 186
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 19 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 67
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 68 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 121
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 122 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 173
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 174 WTAPEAALYGRFTIKS 189
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
+ S ++++ +G G +GR K + G ++ K+L+ SM E+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQM 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
SEVN L L HPN+V+ + + L +V EY + G L + + + Q L +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 200 IRLKIAIGAARGLGFLHTSEK---KVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L++ L H V++RD K +N+ LDG N K+ DFGLA++ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHD 169
Query: 257 SHVTTRVMGTYGYAAPE 273
+GT Y +PE
Sbjct: 170 EDFAKEFVGTPYYMSPE 186
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK------LGPAGGESHVTTRV 263
G+ +L+ KK ++RD A N ++ ++ KI DFG+ + GG+ + R
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 264 MGTYGYAAPEYVATGNF 280
M APE + G F
Sbjct: 199 M------APESLKDGVF 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 15 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 63
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 64 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 117
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 118 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 169
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 170 WTAPEAALYGRFTIKS 185
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK------LGPAGGESHVTTRV 263
G+ +L+ KK ++RD A N ++ ++ KI DFG+ + GG+ + R
Sbjct: 138 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 264 MGTYGYAAPEYVATGNF 280
M APE + G F
Sbjct: 196 M------APESLKDGVF 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 275 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 323
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 324 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 377
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 378 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 429
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 430 WTAPEAALYGRFTIKS 445
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 17 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 65
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 66 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 119
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 120 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 171
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 172 WTAPEAALYGRFTIKS 187
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK------LGPAGGESHVTTRV 263
G+ +L+ KK ++RD A N ++ ++ KI DFG+ + GG+ + R
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 264 MGTYGYAAPEYVATGNF 280
M APE + G F
Sbjct: 199 M------APESLKDGVF 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 29/183 (15%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLG-MVVAIKKLNPE-SMQGFEEWQSEV 146
KN LGEG FG+V K T K G VA+K L S + SE
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF 77
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR----------------- 189
N L +++HP+++KL G C +D LLL+ EY + GSL L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 190 ---NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
+P + L+ + A ++G+ +L +E +++RD A NIL+ KISDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 247 LAK 249
L++
Sbjct: 196 LSR 198
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 240
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 241 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 294
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 295 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIK 346
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 347 WTAPEAALYGRFTIKS 362
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 240
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 241 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 294
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 295 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIK 346
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 347 WTAPEAALYGRFTIKS 362
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ KK ++RD A N ++ ++ KI DFG+ +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ KK ++RD A N ++ ++ KI DFG+ +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 23 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 71
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 72 LVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLV----DMSAQIASGMA- 125
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 126 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIK 177
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 178 WTAPEAALYGRFTIKS 193
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL-SH 154
LG G FG+V V+ K+ M VA+K L P + + E SE+ L L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQPLSWDIRL--- 202
N+V LLG C L++ EY G L N L R+ +P+I
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 203 --KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + K I+RD A NILL KI DFGLA+
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE 141
+D + F+ LLG+G FG+V + + G A+K L E + +E
Sbjct: 3 MDPRVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDE 53
Query: 142 WQ---SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSW 198
+E L HP L L L V EY G L HL R + S
Sbjct: 54 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSE 109
Query: 199 DIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH 258
D L +LH SEK V+YRD K N++LD + + KI+DFGL K G G +
Sbjct: 110 DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 167
Query: 259 VTTRVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 168 -MKXFCGTPEYLAPEVLEDNDY 188
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE---EWQSEVNFLGRLS 153
LG G FG+V G G VA+K LN + ++ + + + E+ L
Sbjct: 19 LGVGTFGKVKIG---------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HP+++KL + +V EY+ G L +++ + ++ + RL I +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEAR-RLFQQILSAVDYC 127
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H V++RD K N+LLD + NAKI+DFGL+ + + GE T+ G+ YAAPE
Sbjct: 128 HRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS--CGSPNYAAPE 180
Query: 274 YVATGNFY 281
V +G Y
Sbjct: 181 -VISGRLY 187
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 86 SATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-S 144
S++ FK LG G + VYKG +KT G+ VA+K++ +S +G
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL--NKTT-------GVYVALKEVKLDSEEGTPSTAIR 52
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK- 203
E++ + L H N+V+L + +L LV+E+M L+ ++ R P ++ L
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 204 -IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+GL F H E K+++RD K N+L++ K+ DFGLA+
Sbjct: 112 YFQWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
D LG G FG V +G K + + + + K E EE E + +L
Sbjct: 15 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLD 68
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
+P +V+L+G C + + L+LV E G L L + I P+S L + +G
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVS----MG 122
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAA 271
+ EK ++RD A N+LL + AKISDFGL+K +S+ T R G + + A
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYA 181
Query: 272 PEYVATGNFYLLSAK 286
PE + NF S++
Sbjct: 182 PECI---NFRKFSSR 193
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL-SH 154
LG G FG+V V+ K+ M VA+K L P + + E SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQPLSWDIRL--- 202
N+V LLG C L++ EY G L N L R+ +P+I
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 203 --KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + K I+RD A NILL KI DFGLA+
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 28/195 (14%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 61
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY RG + L Q LS +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQR 114
Query: 204 IA---IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
A A L + H+ K+VI+RD K N+LL KI+DFG + P S
Sbjct: 115 TATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRR 168
Query: 261 TRVMGTYGYAAPEYV 275
+ GT Y PE +
Sbjct: 169 XXLXGTLDYLPPEMI 183
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL-SH 154
LG G FG+V V+ K+ M VA+K L P + + E SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQPLSWDIRL--- 202
N+V LLG C L++ EY G L N L R+ +P+I
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 203 --KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + K I+RD A NILL KI DFGLA+
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL-SH 154
LG G FG+V V+ K+ M VA+K L P + + E SE+ L L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQPLSWDIRL--- 202
N+V LLG C L++ EY G L N L R+ +P+I
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 203 --KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + K I+RD A NILL KI DFGLA+
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TEL 166
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 167 CGTLDYLPPEMI 178
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N K L+G G +G VYKG +D++ VA+K + + Q F + + +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDERP-----------VAVKVFSFANRQNFIN-EKNIYRV 61
Query: 150 GRLSHPNLVKLL---GYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
+ H N+ + + D E LLV EY GSL +L S+ W ++
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRL 116
Query: 205 AIGAARGLGFLHTS-------EKKVIYRDFKASNILLDGNYNAKISDFGLA------KLG 251
A RGL +LHT + + +RD + N+L+ + ISDFGL+ +L
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 252 PAGGESHVTTRVMGTYGYAAPE 273
G E + +GT Y APE
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPE 198
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQSEVNFLGRLS 153
LG+G FG VY LA + ++A+K L ++ G E + + EV L
Sbjct: 20 LGKGKFGNVY--------LARERQS-KFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI---GAAR 210
HPN+++L GY + + L+ EY G++ L Q LS + A A
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTATYITELAN 123
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
L + H+ K+VI+RD K N+LL N KI+DFG + P+ T + GT Y
Sbjct: 124 ALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYL 177
Query: 271 APEYV 275
PE +
Sbjct: 178 PPEMI 182
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFEEWQSEVNFLGRL-SH 154
LG G FG+V V+ K+ M VA+K L P + + E SE+ L L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR---------NPSIQPLSWDIRL--- 202
N+V LLG C L++ EY G L N L R+ +P+I
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 203 --KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + K I+RD A NILL KI DFGLA+
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 29/203 (14%)
Query: 69 QILETPDLKVFSFLDLKSATKN----FKPDSL-----LGEGGFGRVYKGWVDDKTLAPSK 119
+I+E+ + ++F+D N F ++L LG G FG+V V+ K
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV----VEATAFGLGK 72
Query: 120 TGLGMVVAIKKLNPESMQGFEE-WQSEVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYM 177
+ VA+K L + +E SE+ + L H N+V LLG C +L++ EY
Sbjct: 73 EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 132
Query: 178 QRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSE-----------KKVIYRD 226
G L N L R++ + L D IA A LH S K I+RD
Sbjct: 133 CYGDLLNFLRRKS---RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 227 FKASNILLDGNYNAKISDFGLAK 249
A N+LL + AKI DFGLA+
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 170 CGTLDYLPPEMI 181
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 33/192 (17%)
Query: 98 GEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSE--VNFLGRLSHP 155
G FG V+K + L VA+K +Q + WQ+E V L + H
Sbjct: 33 ARGRFGCVWKAQL-----------LNEYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHE 78
Query: 156 NLVKLLGY----CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
N+++ +G D +L L+ + ++GSL + L +SW+ IA ARG
Sbjct: 79 NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARG 133
Query: 212 LGFLHTS--------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
L +LH + + +RD K+ N+LL N A I+DFGLA AG + T
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 264 MGTYGYAAPEYV 275
+GT Y APE +
Sbjct: 194 VGTRRYMAPEVL 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + ++ H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKIRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 240
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 241 LVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLV----DMAAQIASGMA- 294
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 295 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIK 346
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 347 WTAPEAALYGRFTIKS 362
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 61
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 117
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 172 CGTLDYLPPEXI 183
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 61
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 117
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 172 CGTLDYLPPEMI 183
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 167 CGTLDYLPPEMI 178
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 73
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 129
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 130 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 183
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 184 CGTLDYLPPEMI 195
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 19/188 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ---SEVNFLGRL 152
LLG+G FG+V + + G A+K L E + +E +E L
Sbjct: 155 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP L L L V EY G L HL R + S D L
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSAL 261
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
+LH SEK V+YRD K N++LD + + KI+DFGL K G G + T GT Y AP
Sbjct: 262 DYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 318
Query: 273 EYVATGNF 280
E + ++
Sbjct: 319 EVLEDNDY 326
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 61
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 117
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 171
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 172 CGTLDYLPPEMI 183
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 167 CGTLDYLPPEMI 178
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 170 CGTLDYLPPEMI 181
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 57
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 113
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 CGTLDYLPPEMI 179
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 19/188 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ---SEVNFLGRL 152
LLG+G FG+V + + G A+K L E + +E +E L
Sbjct: 158 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP L L L V EY G L HL R + S D L
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSAL 264
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
+LH SEK V+YRD K N++LD + + KI+DFGL K G G + T GT Y AP
Sbjct: 265 DYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 321
Query: 273 EYVATGNF 280
E + ++
Sbjct: 322 EVLEDNDY 329
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 166
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 167 CGTLDYLPPEMI 178
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 55
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 111
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 112 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 165
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 166 CGTLDYLPPEMI 177
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +G L + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLAAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 60
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 116
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 117 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 170
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 171 CGTLDYLPPEMI 182
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 139 FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKE--LLLVYEYMQRGSLENHLFRRNPSIQPL 196
E+ E+ L +L HPN+VKL+ + E L +V+E + +G + P+++PL
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-----MEVPTLKPL 134
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
S D +G+ +LH +K+I+RD K SN+L+ + + KI+DFG++ G
Sbjct: 135 SEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGS 190
Query: 257 SHVTTRVMGTYGYAAPE 273
+ + +GT + APE
Sbjct: 191 DALLSNTVGTPAFMAPE 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXL 166
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 167 CGTLDYLPPEMI 178
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+GEG FG K + T G IK++N M + EE + EV L + H
Sbjct: 32 IGEGSFG---------KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSL-------ENHLFRRNPSIQPLSWDIRLKIAIG 207
PN+V+ E+ L +V +Y + G L + LF+ + Q L W +++ +A+
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED---QILDWFVQICLALK 139
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H ++K+++RD K+ NI L + ++ DFG+A++ + E + +GT
Sbjct: 140 --------HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTP 189
Query: 268 GYAAPE 273
Y +PE
Sbjct: 190 YYLSPE 195
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 22/188 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE---EWQSEVNFLGRLS 153
LG G FG+V G G VA+K LN + ++ + + + E+ L
Sbjct: 19 LGVGTFGKVKIG---------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HP+++KL + +V EY+ G L +++ + ++ + RL I +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEAR-RLFQQILSAVDYC 127
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H V++RD K N+LLD + NAKI+DFGL+ + G G+ YAAPE
Sbjct: 128 HRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRDSCGSPNYAAPE 180
Query: 274 YVATGNFY 281
V +G Y
Sbjct: 181 -VISGRLY 187
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 82
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 138
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P S T +
Sbjct: 139 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTL 192
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 193 CGTLDYLPPEMI 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKNS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G++ +R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ KKVI+RD K N+LL KI+DFG + P+ + +
Sbjct: 113 YITELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 -GTLDYLPPEMI 178
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEK 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +G L + L + R P + D+ +IA G A
Sbjct: 75 LVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 128
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGLA+L ++ T R +
Sbjct: 129 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIK 180
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 181 WTAPEAALYGRFTIKS 196
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 57
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 113
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTL 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 SGTLDYLPPEMI 179
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 16/193 (8%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K+ +F+ +LG+G FG+V+ + K P G + A+K L +++ + ++
Sbjct: 24 KADPSHFELLKVLGQGSFGKVF---LVRKVTRPDS---GHLYAMKVLKKATLKVRDRVRT 77
Query: 145 --EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
E + L ++HP +VKL + +L L+ ++++ G L R + + D++
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 134
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+A A LG H +IYRD K NILLD + K++DFGL+K A
Sbjct: 135 YLAELA---LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYS 189
Query: 263 VMGTYGYAAPEYV 275
GT Y APE V
Sbjct: 190 FCGTVEYMAPEVV 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 74 PDLKVFSFLDLKSATKNFKPDSL--------------LGEGGFGRVYK-GWVDDKTLAPS 118
P K + +D KSA PD L LG+GGF + Y+ +D K
Sbjct: 13 PSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE---- 68
Query: 119 KTGLGMVVAIKKLNPESM----QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVY 174
V K+ P+SM E+ +E+ L +P++V G+ +D + +V
Sbjct: 69 -------VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVL 121
Query: 175 EYMQRGSLENHLFRRNPSIQPLS-WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNIL 233
E +R SL RR +P + + +R I +G+ +LH + +VI+RD K N+
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--RVIHRDLKLGNLF 174
Query: 234 LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
L+ + + KI DFGLA GE T + GT Y APE +
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLC 215
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 79/188 (42%), Gaps = 19/188 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ---SEVNFLGRL 152
LLG+G FG+V + + G A+K L E + +E +E L
Sbjct: 15 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP L L L V EY G L HL R + S D L
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSAL 121
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
+LH SEK V+YRD K N++LD + + KI+DFGL K G G + GT Y AP
Sbjct: 122 DYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAP 178
Query: 273 EYVATGNF 280
E + ++
Sbjct: 179 EVLEDNDY 186
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY--------LAREKQR-KFILALKVLFKAQLEKAGVEHQLR 53
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 109
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ T +
Sbjct: 110 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 163
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 164 CGTLDYLPPEMI 175
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K S LG+G FG V D P G +VA+K+L ++Q E+
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 149 LGRLSHPNLVKLLGYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L L +VK G + EL LV EY+ G L + L R + D +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL-----DASRLLLY 116
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV-MG 265
+ G + ++ ++RD A NIL++ + KI+DFGLAKL P + V
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 266 TYGYAAPEYVATGNF 280
+ APE ++ F
Sbjct: 177 PIFWYAPESLSDNIF 191
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 79/188 (42%), Gaps = 19/188 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ---SEVNFLGRL 152
LLG+G FG+V + + G A+K L E + +E +E L
Sbjct: 16 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP L L L V EY G L HL R + S D L
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSAL 122
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
+LH SEK V+YRD K N++LD + + KI+DFGL K G G + GT Y AP
Sbjct: 123 DYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAP 179
Query: 273 EYVATGNF 280
E + ++
Sbjct: 180 EVLEDNDY 187
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLSHP 155
+GEG +G V + + KT VAIKK++P Q + + E+ L R H
Sbjct: 51 IGEGAYGMVSSAYDHVR-----KTR----VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N++ + + Y+ + +E L++ S Q LS D RGL ++
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYI 160
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAPEY 274
H++ V++RD K SN+L++ + KI DFGLA++ P + T + T Y APE
Sbjct: 161 HSA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 275 VATGNFYLLSAKFGNV 290
+ Y S +V
Sbjct: 219 MLNSKGYTKSIDIWSV 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L ++ + + + A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAV 126
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + +K +++RD KA N+LLD + N KI+DFG + G + G+ Y
Sbjct: 127 Q-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPY 178
Query: 270 AAPE 273
AAPE
Sbjct: 179 AAPE 182
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGFEEWQ-SEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ KK ++R+ A N ++ ++ KI DFG+ +
Sbjct: 142 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG+G FG VY+G D ++T VA+K +N S++ E+ +E + + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAA 209
++V+LLG + + L+V E M G L+++L NP P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
G+ +L+ KK ++R+ A N ++ ++ KI DFG+ +
Sbjct: 141 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V+KG +D++T VVAIK ++ E+ E+ Q E+ L + P
Sbjct: 35 IGKGSFGEVFKG-IDNRT--------QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ K G +D +L ++ EY+ GS + L P PL I +GL +L
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYL 140
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H SEKK I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 141 H-SEKK-IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 276 ATGNF 280
+
Sbjct: 197 KQSAY 201
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 34 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 142
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 201 PEIMLNSKGYTKSIDIWSV 219
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 35 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 84
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 85 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 143
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 144 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 202 PEIMLNSKGYTKSIDIWSV 220
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 26 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 75
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 76 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 134
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 135 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 193 PEIMLNSKGYTKSIDIWSV 211
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K S LG+G FG V D P G +VA+K+L ++Q E+
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 149 LGRLSHPNLVKLLG--YCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L L +VK G Y + L LV EY+ G L + L R L L +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 134
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+G+ +L + ++ ++RD A NIL++ + KI+DFGLAKL P + +V
Sbjct: 135 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L ++ + + + A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAV 126
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + +K +++RD KA N+LLD + N KI+DFG + G + G+ Y
Sbjct: 127 Q-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 270 AAPE 273
AAPE
Sbjct: 179 AAPE 182
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 73 TPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN 132
TPD+ F +F+ LG+G FG VY LA K +VA+K L
Sbjct: 12 TPDILTRHF-----TIDDFEIGRPLGKGKFGNVY--------LAREKKS-HFIVALKVLF 57
Query: 133 PESMQ--GFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRR 189
++ G E + + E+ L HPN+++L Y ++ + + L+ EY RG L L +
Sbjct: 58 KSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS 117
Query: 190 NPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
++D + I ++ KKVI+RD K N+LL KI+DFG +
Sbjct: 118 ------CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
Query: 250 LGPAGGESHVTTRVM-GTYGYAAPEYV 275
P+ + + M GT Y PE +
Sbjct: 172 HAPS-----LRRKTMCGTLDYLPPEMI 193
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 124 MVVAIKKLNPESMQGFEE-WQSEVNFLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGS 181
M V ++L+PE ++ E + E + L +++ HP+++ L+ + LV++ M++G
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 182 LENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAK 241
L ++L + LS I + FLH + +++RD K NILLD N +
Sbjct: 187 LFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKPENILLDDNMQIR 240
Query: 242 ISDFGLA-KLGPAGGESHVTTRVMGTYGYAAPEYV 275
+SDFG + L P GE + GT GY APE +
Sbjct: 241 LSDFGFSCHLEP--GEK--LRELCGTPGYLAPEIL 271
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 27 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 135
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 194 PEIMLNSKGYTKSIDIWSV 212
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KCQHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 27 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 135
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 194 PEIMLNSKGYTKSIDIWSV 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V+KG +D++T VVAIK ++ E+ E+ Q E+ L + P
Sbjct: 30 IGKGSFGEVFKG-IDNRT--------QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ K G +D +L ++ EY+ GS + L P PL I +GL +L
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYL 135
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H SEKK I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 136 H-SEKK-IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 276 ATGNF 280
+
Sbjct: 192 KQSAY 196
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K S LG+G FG V D P G +VA+K+L ++Q E+
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 149 LGRLSHPNLVKLLGYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L L +VK G + + L LV EY+ G L + L R L L +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 121
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+G+ +L + ++ ++RD A NIL++ + KI+DFGLAKL P + +V
Sbjct: 122 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V+KG +D++T VVAIK ++ E+ E+ Q E+ L + P
Sbjct: 15 IGKGSFGEVFKG-IDNRT--------QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ K G +D +L ++ EY+ GS + L P PL I +GL +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYL 120
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H SEKK I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 121 H-SEKK-IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 276 ATGNF 280
+
Sbjct: 177 KQSAY 181
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L ++ + + + A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAV 126
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + +K +++RD KA N+LLD + N KI+DFG + G + G+ Y
Sbjct: 127 Q-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 270 AAPE 273
AAPE
Sbjct: 179 AAPE 182
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 197 EIMLNSKGYTKSIDIWSV 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L ++ + + + A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAV 126
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + +K +++RD KA N+LLD + N KI+DFG + G + G+ Y
Sbjct: 127 Q-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPY 178
Query: 270 AAPE 273
AAPE
Sbjct: 179 AAPE 182
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 146
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 147 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 205 EIMLNSKGYTKSIDIWSV 222
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 197 EIMLNSKGYTKSIDIWSV 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 193 LGQGCFGEVWMGTWNGTTR----------VAIKTLKPGNMSP-EAFLQEAQVMKKLRHEK 241
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHL------FRRNPSIQPLSWDIRLKIAIGAAR 210
LV+L E+ + +V EYM +GSL + L + R P + D+ +IA G A
Sbjct: 242 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV----DMAAQIASGMA- 295
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--G 268
+ ++RD +A+NIL+ N K++DFGL +L ++ T R +
Sbjct: 296 -----YVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIK 347
Query: 269 YAAPEYVATGNFYLLS 284
+ APE G F + S
Sbjct: 348 WTAPEAALYGRFTIKS 363
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ + +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 170
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 171 -GTLDYLPPEMI 181
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V+KG +D++T VVAIK ++ E+ E+ Q E+ L + P
Sbjct: 15 IGKGSFGEVFKG-IDNRT--------QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ K G +D +L ++ EY+ GS + L P PL I +GL +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYL 120
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H SEKK I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 121 H-SEKK-IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 276 ATGNF 280
+
Sbjct: 177 KQSAY 181
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++ K S LG+G FG V D P G +VA+K+L ++Q E+
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 149 LGRLSHPNLVKLLGYCWED--KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L L +VK G + + L LV EY+ G L + L R L L +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 122
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+G+ +L + ++ ++RD A NIL++ + KI+DFGLAKL P + +V
Sbjct: 123 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 197 EIMLNSKGYTKSIDIWSV 214
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 197 EIMLNSKGYTKSIDIWSV 214
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 199 EIMLNSKGYTKSIDIWSV 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-SEVN 147
+N++P +LG G V + + T + V + E +Q E EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 148 FLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++S HPN+++L + LV++ M++G L ++L + LS KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMR 131
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+ LH + +++RD K NILLD + N K++DFG + +L P GE V G
Sbjct: 132 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEK--LREVCG 185
Query: 266 TYGYAAPEYV 275
T Y APE +
Sbjct: 186 TPSYLAPEII 195
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQSEVNFLGRLS 153
LG+G FG VY LA + ++A+K L ++ G E + + EV L
Sbjct: 20 LGKGKFGNVY--------LARERQS-KFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI---GAAR 210
HPN+++L GY + + L+ EY G++ L Q LS + A A
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTATYITELAN 123
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
L + H+ K+VI+RD K N+LL N KI+DFG + P+ + GT Y
Sbjct: 124 ALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYL 177
Query: 271 APEYV 275
PE +
Sbjct: 178 PPEMI 182
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 158
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 159 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 217 EIMLNSKGYTKSIDIWSV 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 197 EIMLNSKGYTKSIDIWSV 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-SEVN 147
+N++P +LG G V + + T + V + E +Q E EV+
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 148 FLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++S HPN+++L + LV++ M++G L ++L + LS KI
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMR 118
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+ LH + +++RD K NILLD + N K++DFG + +L P GE V G
Sbjct: 119 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEK--LREVCG 172
Query: 266 TYGYAAPEYV 275
T Y APE +
Sbjct: 173 TPSYLAPEII 182
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V+ G + T VAIK L P +M E + E + +L H
Sbjct: 17 LGNGQFGEVWMGTWNGNT----------KVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDK 65
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV+L E+ + +V EYM +GSL + F ++ + L + +A A G+ ++
Sbjct: 66 LVQLYAVVSEEP-IYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAAPEY 274
I+RD +++NIL+ KI+DFGLA+L ++ T R + + APE
Sbjct: 123 --RMNYIHRDLRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPEA 177
Query: 275 VATGNFYLLS 284
G F + S
Sbjct: 178 ALYGRFTIKS 187
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 12 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 63
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L +L ++N ++
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKD----- 116
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 175
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 176 AQTHGKWPVKWYAPECI---NYYKFSSK 200
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 58
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 114
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 115 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 169
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 170 -GTLDYLPPEMI 180
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 2 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 53
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L +L ++N ++
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKD----- 106
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 107 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 165
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 166 AQTHGKWPVKWYAPECI---NYYKFSSK 190
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 6 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 57
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L +L ++N ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKD----- 110
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 169
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 170 AQTHGKWPVKWYAPECI---NYYKFSSK 194
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE---EWQSEVNFLGRLS 153
LGEG FG+V K KT VA+K ++ + ++ + + E+++L L
Sbjct: 17 LGEGSFGKV-------KLATHYKTQQK--VALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HP+++KL ++++V EY G L +++ + + ++ D + +
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEK----KRMTEDEGRRFFQQIICAIE 122
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+ H K+++RD K N+LLD N N KI+DFGL+ + G + G+ YAAPE
Sbjct: 123 YCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 274 YVATGNFY 281
V G Y
Sbjct: 178 -VINGKLY 184
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFE-EWQS 144
AT ++P + +G G +G VYK G VA+K + P +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 145 EVNFLGRLS---HPNLVKLLGYC---WEDKEL--LLVYEYMQRGSLENHLFRRNPSIQPL 196
EV L RL HPN+V+L+ C D+E+ LV+E++ + L +L + P P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L RGL FLH + +++RD K NIL+ K++DFGLA++
Sbjct: 112 ETIKDLMRQF--LRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YSY 164
Query: 257 SHVTTRVMGTYGYAAPEYVATGNF 280
V+ T Y APE + +
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTY 188
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 58
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 114
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI++FG + P+ T +
Sbjct: 115 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 168
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 169 CGTLDYLPPEMI 180
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 22 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 73
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L N ++N ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKD----- 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 185
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 186 AQTHGKWPVKWYAPECI---NYYKFSSK 210
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 22 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 73
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L N ++N ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKD----- 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 185
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 186 AQTHGKWPVKWYAPECI---NYYKFSSK 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
D LG G FG V KG+ + + + + + N +++ +E +E N + +L
Sbjct: 10 DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 64
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
+P +V+++G C E + +LV E + G L +L ++N ++ + I + +G
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKD-----KNIIELVHQVSMG 117
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY--GYAA 271
+ E ++RD A N+LL + AKISDFGL+K A E++ + G + + A
Sbjct: 118 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHGKWPVKWYA 176
Query: 272 PEYVATGNFYLLSAK 286
PE + N+Y S+K
Sbjct: 177 PECI---NYYKFSSK 188
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ + +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 -GTLDYLPPEMI 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 57
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 113
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TL 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 CGTLDYLPPEMI 179
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q EV +
Sbjct: 8 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVKIIDKTQLNSSSLQKL---FREVRIM 60
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L W ++ K A
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-------GW-MKEKEARAKF 112
Query: 210 RGL--GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
R + + +K +++RD KA N+LLD + N KI+DFG + G + G+
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSP 169
Query: 268 GYAAPE 273
YAAPE
Sbjct: 170 PYAAPE 175
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC--- 170
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 171 -GTLDYLPPEMI 181
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 170
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 171 -GTLDYLPPEMI 181
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 21/198 (10%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE 141
L +K ++F+ +LG+G FG+V+ LA K AIK L + + ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVF--------LAEFKKT-NQFFAIKALKKDVVLMDDD 61
Query: 142 WQSEVNFLGRLS----HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLS 197
+ + LS HP L + + L V EY+ G L H+ S
Sbjct: 62 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFD 117
Query: 198 WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES 257
A GL FLH+ K ++YRD K NILLD + + KI+DFG+ K G
Sbjct: 118 LSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 175
Query: 258 HVTTRVMGTYGYAAPEYV 275
T GT Y APE +
Sbjct: 176 --TNEFCGTPDYIAPEIL 191
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 20 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 71
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L N ++N ++
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKD----- 124
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 125 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 183
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 184 AQTHGKWPVKWYAPECI---NYYKFSSK 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFE-EWQS 144
AT ++P + +G G +G VYK G VA+K + P +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 145 EVNFLGRLS---HPNLVKLLGYC---WEDKEL--LLVYEYMQRGSLENHLFRRNPSIQPL 196
EV L RL HPN+V+L+ C D+E+ LV+E++ + L +L + P P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
L RGL FLH + +++RD K NIL+ K++DFGLA++
Sbjct: 112 ETIKDLMRQF--LRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI---YSY 164
Query: 257 SHVTTRVMGTYGYAAPEYVATGNF 280
V+ T Y APE + +
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTY 188
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ-SEVN 147
+N++P +LG G V + + T + V + E +Q E EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 148 FLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++S HPN+++L + LV++ M++G L ++L + LS KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMR 131
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+ LH + +++RD K NILLD + N K++DFG + +L P GE V G
Sbjct: 132 ALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEK--LRSVCG 185
Query: 266 TYGYAAPEYV 275
T Y APE +
Sbjct: 186 TPSYLAPEII 195
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 115
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI++FG + P+ T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 169
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 170 CGTLDYLPPEMI 181
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAI+K++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
N++ +G+G F +V + + K ++ +LN S+Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA----RHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 150 GRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
L+HPN+VKL +K L LV EY G + ++L ++ + + + A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAV 126
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + +K +++RD KA N+LLD + N KI+DFG + G + G Y
Sbjct: 127 Q-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPY 178
Query: 270 AAPE 273
AAPE
Sbjct: 179 AAPE 182
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
D LG G FG V +G K + + + + K E EE E + +L
Sbjct: 341 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLD 394
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
+P +V+L+G C + + L+LV E G L L + I P+S L + +G
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVS----MG 448
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTY--GYA 270
+ EK ++R+ A N+LL + AKISDFGL+K LG +S+ T R G + +
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWY 506
Query: 271 APEYVATGNFYLLSAK 286
APE + NF S++
Sbjct: 507 APECI---NFRKFSSR 519
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 112
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 167
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 168 -GTLDYLPPEMI 178
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQ 143
A ++F+ LG+G FG VY LA K ++A+K L ++ G E + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--------LAREKQS-KFILALKVLFKAQLEKAGVEHQLR 82
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L HPN+++L GY + + L+ EY G+ ++R +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTAT 138
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L + H+ K+VI+RD K N+LL KI+DFG + P+ +
Sbjct: 139 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC--- 193
Query: 264 MGTYGYAAPEYV 275
GT Y PE +
Sbjct: 194 -GTLDYLPPEMI 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 365 YLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--D 416
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L N ++N ++ D
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVK----DK 470
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 471 NI-IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 528
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 529 AQTHGKWPVKWYAPECI---NYYKFSSK 553
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 364 YLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--D 415
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L N ++N ++ D
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVK----DK 469
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E++
Sbjct: 470 NI-IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYK 527
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 528 AQTHGKWPVKWYAPECI---NYYKFSSK 552
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 20/160 (12%)
Query: 96 LLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLS 153
+LG G FG VYKG W+ P + + VAIK L S + +E E + +
Sbjct: 24 VLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR---RNPSIQPLSWDIRLKIAIGAAR 210
P + +LLG C + LV + M G L +H+ R S L+W +++ A+
Sbjct: 78 SPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AK 130
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
G+ +L + ++++RD A N+L+ + KI+DFGLA+L
Sbjct: 131 GMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 71 LETPDLKVFSFLDLKSATKNFKPDSL--------------LGEGGFGRVYK-GWVDDKTL 115
+ P K + +D KSA PD L LG+GGF + Y+ +D K
Sbjct: 10 IAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE- 68
Query: 116 APSKTGLGMVVAIKKLNPESM----QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELL 171
V K+ P+SM E+ +E+ L +P++V G+ +D +
Sbjct: 69 ----------VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 172 LVYEYMQRGSLENHLFRRNPSIQPLS-WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKAS 230
+V E +R SL RR +P + + +R I +G+ +LH + +VI+RD K
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--RVIHRDLKLG 171
Query: 231 NILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
N+ L+ + + KI DFGLA GE + GT Y APE +
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLC 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFE-EWQS 144
AT ++P + +G G +G VYK G VA+K + P +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 145 EVNFLGRLS---HPNLVKLLGYC---WEDKEL--LLVYEYMQRGSLENHLFRRNPSIQPL 196
EV L RL HPN+V+L+ C D+E+ LV+E++ + L +L + P P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
L RGL FLH + +++RD K NIL+ K++DFGLA++
Sbjct: 112 ETIKDLMRQF--LRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 97 LGEGGFGRVYKGWVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G G FG V+ G + D TL K+ + L P+ F + E L + SHP
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKS------CRETLPPDLKAKFLQ---EARILKQYSHP 172
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+V+L+G C + + + +V E +Q G F R + L L++ AA G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLT--FLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK------LGPAGGESHVTTRVMGTYGY 269
+ K I+RD A N L+ KISDFG+++ +GG V + +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK------W 281
Query: 270 AAPEYVATGNF 280
APE + G +
Sbjct: 282 TAPEALNYGRY 292
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 97 LGEGGFGRV--YKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
LGEGGF V +G D G A+K++ Q EE Q E + +H
Sbjct: 37 LGEGGFSYVDLVEGLHD-----------GHFYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 155 PNLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
PN+++L+ YC ++ E L+ + +RG+L N + R L+ D L + +G R
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG---LAKLGPAGGESHVTTRVMG-- 265
GL +H K +RD K +NILL + D G A + G +T +
Sbjct: 146 GLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 266 --TYGYAAPEYVATGNFYLLSAK 286
T Y APE + + ++ +
Sbjct: 204 RCTISYRAPELFSVQSHCVIDER 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 74 PDLKVFSFLDLKSATKNFKPDSL--------------LGEGGFGRVYK-GWVDDKTLAPS 118
P K + +D KSA PD L LG+GGF + Y+ +D K
Sbjct: 13 PSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE---- 68
Query: 119 KTGLGMVVAIKKLNPESM----QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVY 174
V K+ P+SM E+ +E+ L +P++V G+ +D + +V
Sbjct: 69 -------VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVL 121
Query: 175 EYMQRGSLENHLFRRNPSIQPLS-WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNIL 233
E +R SL RR +P + + +R I +G+ +LH + +VI+RD K N+
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--RVIHRDLKLGNLF 174
Query: 234 LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
L+ + + KI DFGLA GE + GT Y APE +
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLC 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 97 LGEGGFGRVYKGWVD-DKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G G FG V+ G + D TL K+ + L P+ F + E L + SHP
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKS------CRETLPPDLKAKFLQ---EARILKQYSHP 172
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+V+L+G C + + + +V E +Q G F R + L L++ AA G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLT--FLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK------LGPAGGESHVTTRVMGTYGY 269
+ K I+RD A N L+ KISDFG+++ +GG V + +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK------W 281
Query: 270 AAPEYVATGNF 280
APE + G +
Sbjct: 282 TAPEALNYGRY 292
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + +L+H N+V+ +G + ++ E M G L++ L P
Sbjct: 87 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L R
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL----FRRNPSIQPLSWDIRLKIAIGAA 209
H N++ + D E M+ L HL + Q LS D
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYG 268
RGL ++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 269 YAAPEYVATGNFYLLSAKFGNV 290
Y APE + Y S +V
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSV 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 72
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + +L+H N+V+ +G + ++ E M G L++ L P
Sbjct: 73 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
+LD K T D LG G FG V KG+ + + + + + N +++ +
Sbjct: 6 YLDRKLLTLE---DKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALK--D 57
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
E +E N + +L +P +V+++G C E + +LV E + G L +L ++N ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKD----- 110
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ I + +G + E ++RD A N+LL + AKISDFGL+K A E+
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENXYK 169
Query: 261 TRVMGTY--GYAAPEYVATGNFYLLSAK 286
+ G + + APE + N+Y S+K
Sbjct: 170 AQTHGKWPVKWYAPECI---NYYKFSSK 194
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS-H 154
+L EGGF VY+ G G A+K+L + EV F+ +LS H
Sbjct: 35 VLAEGGFAFVYEA---------QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH 85
Query: 155 PNLVKLLGYCWEDKE--------LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
PN+V+ KE LL+ E + +G L L ++ S PLS D LKI
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFL-KKMESRGPLSCDTVLKIFY 143
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
R + +H + +I+RD K N+LL K+ DFG A
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 33 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 141
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + + T Y A
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMV-VAIKKLNPESMQGF-EEWQSEVNFLGRL 152
S +GEG +G V + L V VAIKK++P Q + + E+ L R
Sbjct: 34 SYIGEGAYGMVCSAY----------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGL 142
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAA 271
++H++ V++RD K SN+LL+ + KI DFGLA++ P + + T Y A
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 272 PEYVATGNFYLLSAKFGNV 290
PE + Y S +V
Sbjct: 201 PEIMLNSKGYTKSIDIWSV 219
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 20/202 (9%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE 141
+D K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDE 53
Query: 142 WQ---SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSW 198
+E L HP L L L V EY G L HL R + +
Sbjct: 54 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 199 DIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESH 258
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G +
Sbjct: 114 FYGAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT- 166
Query: 259 VTTRVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 167 -MKXFCGTPEYLAPEVLEDNDY 187
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G + T
Sbjct: 112 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 165 -FCGTPEYLAPEVLEDNDY 182
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 55 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 114
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G + T
Sbjct: 115 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 167
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 168 -FCGTPEYLAPEVLEDNDY 185
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE 141
L +K ++F +LG+G FG+V+ LA K AIK L + + ++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVF--------LAEFKKT-NQFFAIKALKKDVVLMDDD 60
Query: 142 WQSEVNFLGRLS----HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLS 197
+ + LS HP L + + L V EY+ G L H+ S
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFD 116
Query: 198 WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES 257
A GL FLH+ K ++YRD K NILLD + + KI+DFG+ K G
Sbjct: 117 LSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174
Query: 258 HVTTRVMGTYGYAAPEYV 275
T GT Y APE +
Sbjct: 175 --TNXFCGTPDYIAPEIL 190
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
L+G G +G+VYKG G + AIK ++ + EE + E+N L + SH
Sbjct: 30 ELVGNGTYGQVYKG---------RHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSH 79
Query: 155 -PNLVKLLGYCWE------DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+ G + D +L LV E+ GS+ + + +N L + I
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICRE 137
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGL-AKLGPAGGESHVTTRVMGT 266
RGL LH + KVI+RD K N+LL N K+ DFG+ A+L G + +GT
Sbjct: 138 ILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGT 192
Query: 267 YGYAAPEYVA 276
+ APE +A
Sbjct: 193 PYWMAPEVIA 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G + T
Sbjct: 112 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 165 -FCGTPEYLAPEVLEDNDY 182
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEVNFLGRLSH 154
+GEG +G V+K +VA+K+ L+ + E+ L L H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
N+V+L DK+L LV+E+ + L+ + N + P +I +GLGF
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGF 116
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
H+ + V++RD K N+L++ N K++DFGLA+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG VYKG +D+ T VVAIK ++ E+ E+ Q E+ L + P
Sbjct: 27 IGKGSFGEVYKG-IDNHT--------KEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ + G + +L ++ EY+ GS + L P PL I +GL +L
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPG--PLEETYIATILREILKGLDYL 132
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H+ K I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 133 HSERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 276 ATGNF 280
+
Sbjct: 189 KQSAY 193
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 94/223 (42%), Gaps = 51/223 (22%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG GGFG V + W+ T G VAIK+ E S + E W E+ + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 156 NLVKL------LGYCWEDKELLLVYEYMQRGSLENHL--------FRRNPSIQPLSWDIR 201
N+V L + LL EY + G L +L + P I+ L DI
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-IRTLLSDI- 130
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA---KISDFGLAKLGPAGGESH 258
+ L +LH E ++I+RD K NI+L KI D G AK G
Sbjct: 131 -------SSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---E 178
Query: 259 VTTRVMGTYGYAAPE------YVATGNFYLLSAKFGNVINVCM 295
+ T +GT Y APE Y T +++ FG + C+
Sbjct: 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYW----SFGTLAFECI 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 94/223 (42%), Gaps = 51/223 (22%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSEVNFLGRLSHP 155
LG GGFG V + W+ T G VAIK+ E S + E W E+ + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 156 NLVKL------LGYCWEDKELLLVYEYMQRGSLENHL--------FRRNPSIQPLSWDIR 201
N+V L + LL EY + G L +L + P I+ L DI
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-IRTLLSDI- 131
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA---KISDFGLAKLGPAGGESH 258
+ L +LH E ++I+RD K NI+L KI D G AK G
Sbjct: 132 -------SSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---E 179
Query: 259 VTTRVMGTYGYAAPE------YVATGNFYLLSAKFGNVINVCM 295
+ T +GT Y APE Y T +++ FG + C+
Sbjct: 180 LCTEFVGTLQYLAPELLEQKKYTVTVDYW----SFGTLAFECI 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 32/210 (15%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
L A + ++ + +GEG +G+V+K + L K G G VA+K++ +Q EE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA----RDL---KNG-GRFVALKRVR---VQTGEEGM 54
Query: 144 -----SEVNFLGRLS---HPNLVKLLGYC---WEDKE--LLLVYEYMQRGSLENHLFRRN 190
EV L L HPN+V+L C D+E L LV+E++ + L +L +
Sbjct: 55 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKV 112
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
P + I+ + RGL FLH+ +V++RD K NIL+ + K++DFGLA++
Sbjct: 113 PEPGVPTETIK-DMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 251 GPAGGESHVTTRVMGTYGYAAPEYVATGNF 280
T V+ T Y APE + ++
Sbjct: 170 ---YSFQMALTSVVVTLWYRAPEVLLQSSY 196
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
L A + ++ + +GEG +G+V+K K G G VA+K++ +Q EE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVR---VQTGEEGM 54
Query: 144 -----SEVNFLGRLS---HPNLVKLLGYC---WEDKE--LLLVYEYMQRGSLENHLFRRN 190
EV L L HPN+V+L C D+E L LV+E++ + L +L +
Sbjct: 55 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKV 112
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
P + I+ + RGL FLH+ +V++RD K NIL+ + K++DFGLA++
Sbjct: 113 PEPGVPTETIK-DMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 251 GPAGGESHVTTRVMGTYGYAAPEYVATGNF 280
T V+ T Y APE + ++
Sbjct: 170 ---YSFQMALTSVVVTLWYRAPEVLLQSSY 196
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTG--LGMVVAIKKLNPESMQGFEEW 142
K +NF+ +LG G +G+V+ + ++ TG M V K + + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLV----RKISGHDTGKLYAMKVLKKATIVQKAKTTEHT 105
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWE-DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
++E L + + L Y ++ + +L L+ +Y+ G L HL +R +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-----E 160
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
++I +G L H + +IYRD K NILLD N + ++DFGL+K A E+
Sbjct: 161 VQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAY 218
Query: 262 RVMGTYGYAAPEYVATGN 279
GT Y AP+ V G+
Sbjct: 219 DFCGTIEYMAPDIVRGGD 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 51 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 110 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 162
Query: 244 DFGLAK 249
DFGL++
Sbjct: 163 DFGLSR 168
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 51 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 110 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 162
Query: 244 DFGLAK 249
DFGL++
Sbjct: 163 DFGLSR 168
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 42 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 101 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 153
Query: 244 DFGLAK 249
DFGL++
Sbjct: 154 DFGLSR 159
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 79 FSFLDLKSATKN-FKPDSLLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESM 136
+ +L+ + TKN F+ +LG+GGFG V V TG + ++K +
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV-------RATGKMYACKKLEKKRIKKR 225
Query: 137 QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQP 195
+G +E L +++ V L Y +E K+ L LV M G L+ H++ + P
Sbjct: 226 KGEAMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
+ + I GL LH ++++YRD K NILLD + + +ISD GLA P G
Sbjct: 285 EARAVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 339
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNF 280
+ RV GT GY APE V +
Sbjct: 340 -QTIKGRV-GTVGYMAPEVVKNERY 362
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
L A + ++ + +GEG +G+V+K K G G VA+K++ +Q EE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVR---VQTGEEGM 54
Query: 144 -----SEVNFLGRLS---HPNLVKLLGYC---WEDKE--LLLVYEYMQRGSLENHLFRRN 190
EV L L HPN+V+L C D+E L LV+E++ + L +L +
Sbjct: 55 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKV 112
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKL 250
P + I+ + RGL FLH+ +V++RD K NIL+ + K++DFGLA++
Sbjct: 113 PEPGVPTETIK-DMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 251 GPAGGESHVTTRVMGTYGYAAPEYVATGNF 280
T V+ T Y APE + ++
Sbjct: 170 ---YSFQMALTSVVVTLWYRAPEVLLQSSY 196
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 79 FSFLDLKSATKN-FKPDSLLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESM 136
+ +L+ + TKN F+ +LG+GGFG V V TG + ++K +
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV-------RATGKMYACKKLEKKRIKKR 225
Query: 137 QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQP 195
+G +E L +++ V L Y +E K+ L LV M G L+ H++ + P
Sbjct: 226 KGEAMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
+ + I GL LH ++++YRD K NILLD + + +ISD GLA P G
Sbjct: 285 EARAVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 339
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNF 280
+ RV GT GY APE V +
Sbjct: 340 -QTIKGRV-GTVGYMAPEVVKNERY 362
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 31 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 90 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 142
Query: 244 DFGLAK 249
DFGL++
Sbjct: 143 DFGLSR 148
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 29/210 (13%)
Query: 72 ETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
E PD+ +D ++ K + LG+GGF + Y+ + D G K+
Sbjct: 14 EIPDV----LVDPRTM-KRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAG--------KV 58
Query: 132 NPESM----QGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLF 187
P+SM E+ +E+ L +P++V G+ +D + +V E +R SL
Sbjct: 59 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 118
Query: 188 RRNPSIQPLS-WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
RR +P + + +R I +G+ +LH + +VI+RD K N+ L+ + + KI DFG
Sbjct: 119 RRKAVTEPEARYFMRQTI-----QGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFG 171
Query: 247 LAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
LA GE + GT Y APE +
Sbjct: 172 LATKIEFDGER--KKDLCGTPNYIAPEVLC 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 35 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 94 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 146
Query: 244 DFGLAK 249
DFGL++
Sbjct: 147 DFGLSR 152
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQ-- 143
AT ++P + +G G +G VYK G VA+K + P G
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 144 --SEVNFLGRLS---HPNLVKLLGYC---WEDKEL--LLVYEYMQRGSLENHLFRRNPSI 193
EV L RL HPN+V+L+ C D+E+ LV+E++ + L +L + P
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 194 QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPA 253
P L RGL FLH + +++RD K NIL+ K++DFGLA++
Sbjct: 117 LPAETIKDLMRQF--LRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARI--- 169
Query: 254 GGESHVTTRVMGTYGYAAPEYVATGNF 280
T V+ T Y APE + +
Sbjct: 170 YSYQMALTPVVVTLWYRAPEVLLQSTY 196
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 112
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 113 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 172
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQSEVNFLGRLS 153
LG+G FG VY LA K ++A+K L ++ G E + + E+ L
Sbjct: 22 LGKGKFGNVY--------LAREKQN-KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++++ Y + K + L+ E+ RG L L + + S ++A L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALH 128
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM-GTYGYAAP 272
+ H E+KVI+RD K N+L+ KI+DFG + P+ + R M GT Y P
Sbjct: 129 YCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPP 181
Query: 273 EYV 275
E +
Sbjct: 182 EMI 184
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 36 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 95 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 147
Query: 244 DFGLAK 249
DFGL++
Sbjct: 148 DFGLSR 153
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 89
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 90 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQSEVNFLGRLS 153
LG+G FG VY LA K ++A+K L ++ G E + + E+ L
Sbjct: 23 LGKGKFGNVY--------LAREKQN-KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++++ Y + K + L+ E+ RG L L + + S ++A L
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALH 129
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM-GTYGYAAP 272
+ H E+KVI+RD K N+L+ KI+DFG + P+ + R M GT Y P
Sbjct: 130 YCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPP 182
Query: 273 EYV 275
E +
Sbjct: 183 EMI 185
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ--GFE-EWQSEVNFLGRLS 153
LG+G FG VY LA K ++A+K L ++ G E + + E+ L
Sbjct: 22 LGKGKFGNVY--------LAREKQN-KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++++ Y + K + L+ E+ RG L L + + S ++A L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALH 128
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM-GTYGYAAP 272
+ H E+KVI+RD K N+L+ KI+DFG + P+ + R M GT Y P
Sbjct: 129 YCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPP 181
Query: 273 EYV 275
E +
Sbjct: 182 EMI 184
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LG G FG+V+K +T G+ +A K + M+ EE ++E++ + +L H
Sbjct: 96 ILGGGRFGQVHKC---------EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
NL++L +++LV EY+ G L + + + ++ L + +K R
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR----- 201
Query: 216 HTSEKKVIYRDFKASNILLDGNYNA---KISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
H + +++ D K NIL N +A KI DFGLA+ + V GT + AP
Sbjct: 202 HMHQMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 273 EYV 275
E V
Sbjct: 258 EVV 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 87 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 146
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 141 EW-QSEVNFLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPL 196
+W Q+E + + S HP LV L + L V EY+ G L H+ R+ P
Sbjct: 97 DWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 156
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
+ + +A L +LH E+ +IYRD K N+LLD + K++D+G+ K G G+
Sbjct: 157 FYSAEISLA------LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208
Query: 257 SHVTTRVMGTYGYAAPE 273
+ T+ GT Y APE
Sbjct: 209 T--TSTFCGTPNYIAPE 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRL 152
+LG+G FG+V + + G + A+K L + + E E L
Sbjct: 27 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 153 SHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
P + L C++ + L V EY+ G L H+ + +P + +IAIG
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG---- 133
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM-GTYGYA 270
L FL + K +IYRD K N++LD + KI+DFG+ K G VTT+ GT Y
Sbjct: 134 LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYI 188
Query: 271 APEYVA 276
APE +A
Sbjct: 189 APEIIA 194
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 126 VAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENH 185
VAIK + SM +E+ E + LSH LV+L G C + + + ++ EYM G L N+
Sbjct: 36 VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 186 L--FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
L R Q L L++ + +L + K+ ++RD A N L++ K+S
Sbjct: 95 LREMRHRFQTQQL-----LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVS 147
Query: 244 DFGLAK 249
DFGL++
Sbjct: 148 DFGLSR 153
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 63
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 64 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 87 YSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 72
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 73 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 27/191 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK-LNPESMQGFEEWQ-SEVNFLGRLSH 154
+GEG +G V+K D G +VAIKK L E ++ E+ L +L H
Sbjct: 11 IGEGSYGVVFKCRNRDT---------GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLE--NHLFRRNPS--IQPLSWDIRLKIAIGAAR 210
PNLV LL + L LV+EY L + R P ++ ++W +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQ 113
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ F H + I+RD K NIL+ + K+ DFG A+L G S + T Y
Sbjct: 114 AVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARL--LTGPSDYYDDEVATRWYR 169
Query: 271 APEYVATGNFY 281
+PE + Y
Sbjct: 170 SPELLVGDTQY 180
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 82
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 141
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTY 267
L +LH K +I+RD K NILL+ + + +I+DFG AK L P ++ + V GT
Sbjct: 142 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 195
Query: 268 GYAAPE 273
Y +PE
Sbjct: 196 QYVSPE 201
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 71
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQSEVNFLGRL 152
+LG+G FG+V + + G + A+K L + + E E L
Sbjct: 348 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 153 SHPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
P + L C++ + L V EY+ G L H+ + +P + +IAIG
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG---- 454
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM-GTYGYA 270
L FL + K +IYRD K N++LD + KI+DFG+ K G VTT+ GT Y
Sbjct: 455 LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYI 509
Query: 271 APEYVA 276
APE +A
Sbjct: 510 APEIIA 515
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 199 EIMLNSKGYTKSIDIWSV 216
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 88
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 89 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 71
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 78
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 79 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 138
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 139 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNFLGRLSHP 155
LG G FG V+ V++++ +GL V IK +N + Q E+ ++E+ L L HP
Sbjct: 30 LGSGAFGDVH--LVEERS-----SGLERV--IKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N++K+ + + +V E + G L + + LS ++ L +
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 216 HTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
H+ + V+++D K NIL + KI DFGLA+L + S T GT Y AP
Sbjct: 141 HS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAP 195
Query: 273 E 273
E
Sbjct: 196 E 196
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 72
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 73 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI---KKLNPESMQGFEEWQSEV 146
N++ +G+G F +V K TG + V I +LN S+Q + EV
Sbjct: 15 NYRLLKTIGKGNFAKV-------KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREV 64
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L+HPN+VKL +K L LV EY G + ++L + + + +
Sbjct: 65 RIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG-RXKEKEARAKFRQIV 123
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
A + + +K +++RD KA N+LLD + N KI+DFG + G + G
Sbjct: 124 SAVQ-----YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGA 175
Query: 267 YGYAAPE 273
YAAPE
Sbjct: 176 PPYAAPE 182
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF-EEWQSEVNFLGRLS 153
S +GEG +G V + + + VAIKK++P Q + + E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N++ + + Y+ + +E L++ + Q LS D RGL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG-PAGGESHVTTRVMGTYGYAAP 272
++H++ V++RD K SN+LL+ + KI DFGLA++ P + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 273 EYVATGNFYLLSAKFGNV 290
E + Y S +V
Sbjct: 199 EIMLNSKGYTKSIDIWSV 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPLSWDIRLKIAIGAAR 210
+HP LV L + L V EY+ G L H+ R+ P + + +A
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----- 133
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
L +LH E+ +IYRD K N+LLD + K++D+G+ K G G++ T+ GT Y
Sbjct: 134 -LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYI 188
Query: 271 APE 273
APE
Sbjct: 189 APE 191
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+LG GGFG V+ + TG L + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM-------KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-H 243
Query: 155 PNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLF---RRNPSIQPLSWDIRLKIAIGAAR 210
+ L Y +E K +L LV M G + H++ NP Q I A
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-----AIFYTAQI 298
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G H ++ +IYRD K N+LLD + N +ISD GLA AG T GT G+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 271 APEYV 275
APE +
Sbjct: 357 APELL 361
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+LG GGFG V+ + TG L + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM-------KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-H 243
Query: 155 PNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLF---RRNPSIQPLSWDIRLKIAIGAAR 210
+ L Y +E K +L LV M G + H++ NP Q I A
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-----AIFYTAQI 298
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G H ++ +IYRD K N+LLD + N +ISD GLA AG T GT G+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 271 APEYV 275
APE +
Sbjct: 357 APELL 361
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+LG GGFG V+ + TG L + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM-------KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-H 243
Query: 155 PNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLF---RRNPSIQPLSWDIRLKIAIGAAR 210
+ L Y +E K +L LV M G + H++ NP Q I A
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-----AIFYTAQI 298
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G H ++ +IYRD K N+LLD + N +ISD GLA AG T GT G+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 271 APEYV 275
APE +
Sbjct: 357 APELL 361
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 77 KVFSFLDLKSAT-KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE- 134
K S DLK KN LG G FG VY+G V PS + VA+K L PE
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 98
Query: 135 -SMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI 193
S Q ++ E + + +H N+V+ +G + ++ E M G L++ L P
Sbjct: 99 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 158
Query: 194 -QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLD---GNYNAKISDFGLAK 249
QP S + + + G + E I+RD A N LL AKI DFG+A+
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ +ILE K+ S + + K + +G+G G VY G V
Sbjct: 2 DEEILE----KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---------DVATGQEV 48
Query: 127 AIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
AI+++N + E +E+ + +PN+V L EL +V EY+ GSL + +
Sbjct: 49 AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
++ R + L FLH+++ VI+RD K+ NILL + + K++DFG
Sbjct: 109 TETCMDEGQIAAVCR-----ECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 247 L-AKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
A++ P E + ++GT + APE V
Sbjct: 162 FCAQITP---EQSKRSEMVGTPYWMAPEVVT 189
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K ++FK +LGEG F V V + LA S+ ++ + + E+ + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
+V + RL HP VKL +D++L Y + G L ++ R+ S
Sbjct: 59 DV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 115
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+ A L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +
Sbjct: 116 IVSA---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 265 GTYGYAAPE 273
GT Y +PE
Sbjct: 171 GTAQYVSPE 179
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTG-LGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
+LG GGFG V+ + TG L + K + +G++ E L ++ H
Sbjct: 192 VLGRGGFGEVFACQM-------KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-H 243
Query: 155 PNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLF---RRNPSIQPLSWDIRLKIAIGAAR 210
+ L Y +E K +L LV M G + H++ NP Q I A
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-----AIFYTAQI 298
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G H ++ +IYRD K N+LLD + N +ISD GLA AG T GT G+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 271 APEYV 275
APE +
Sbjct: 357 APELL 361
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPLSWDIRLKIAIGAAR 210
+HP LV L + L V EY+ G L H+ R+ P + + +A
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----- 118
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
L +LH E+ +IYRD K N+LLD + K++D+G+ K G G++ T+ GT Y
Sbjct: 119 -LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYI 173
Query: 271 APE 273
APE
Sbjct: 174 APE 176
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K ++FK +LGEG F V V + LA S+ ++ + + E+ + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 59
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
+V + RL HP VKL +D++L Y + G L ++ R+ S
Sbjct: 60 DV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 116
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+ A L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +
Sbjct: 117 IVSA---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 265 GTYGYAAPE 273
GT Y +PE
Sbjct: 172 GTAQYVSPE 180
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G +
Sbjct: 112 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 164 XFCGTPEYLAPEVLEDNDY 182
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 14/186 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 37 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 90
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLV-YEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIG 207
+ RL HP VKL +C++D E L Y + G L ++ R+ S +
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 148
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
A L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 149 A---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 268 GYAAPE 273
Y +PE
Sbjct: 204 QYVSPE 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 141 EW-QSEVNFLGRLS-HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN--PSIQPL 196
+W Q+E + + S HP LV L + L V EY+ G L H+ R+ P
Sbjct: 54 DWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 113
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
+ + +A L +LH E+ +IYRD K N+LLD + K++D+G+ K G G+
Sbjct: 114 FYSAEISLA------LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165
Query: 257 SHVTTRVMGTYGYAAPE 273
+ T+ GT Y APE
Sbjct: 166 T--TSXFCGTPNYIAPE 180
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K ++FK +LGEG F V V + LA S+ ++ + + E+ + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
+V + RL HP VKL +D++L Y + G L ++ R+ S
Sbjct: 61 DV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 117
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+ A L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +
Sbjct: 118 IVSA---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 265 GTYGYAAPE 273
GT Y +PE
Sbjct: 173 GTAQYVSPE 181
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G +
Sbjct: 112 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 164 XFCGTPEYLAPEVLEDNDY 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 86
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 145
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTY 267
L +LH K +I+RD K NILL+ + + +I+DFG AK L P ++ + V GT
Sbjct: 146 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 199
Query: 268 GYAAPE 273
Y +PE
Sbjct: 200 QYVSPE 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 82
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 141
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 142 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 269 YAAPE 273
Y +PE
Sbjct: 197 YVSPE 201
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTY 267
L +LH K +I+RD K NILL+ + + +I+DFG AK L P ++ + V GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 198
Query: 268 GYAAPE 273
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ- 143
K +F LLG+G FG+V + + G A+K L E + +E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 144 --SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
+E L HP L L L V EY G L HL R + +
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT 261
+I L +LH+ + V+YRD K N++LD + + KI+DFGL K G + G +
Sbjct: 112 AEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 262 RVMGTYGYAAPEYVATGNF 280
GT Y APE + ++
Sbjct: 164 XFCGTPEYLAPEVLEDNDY 182
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K ++FK +LGEG F V V + LA S+ ++ + + E+ + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
+V + RL HP VKL +D++L Y + G L ++ R+ S
Sbjct: 62 DV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 118
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+ A L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +
Sbjct: 119 IVSA---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 265 GTYGYAAPE 273
GT Y +PE
Sbjct: 174 GTAQYVSPE 182
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ +ILE K+ S + + K + +G+G G VY G V
Sbjct: 3 DEEILE----KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---------DVATGQEV 49
Query: 127 AIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
AI+++N + E +E+ + +PN+V L EL +V EY+ GSL + +
Sbjct: 50 AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 109
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
++ R + L FLH+++ VI+RD K+ NILL + + K++DFG
Sbjct: 110 TETCMDEGQIAAVCR-----ECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFG 162
Query: 247 L-AKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
A++ P E + ++GT + APE V
Sbjct: 163 FCAQITP---EQSKRSXMVGTPYWMAPEVVT 190
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ +ILE K+ S + + K + +G+G G VY G V
Sbjct: 2 DEEILE----KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---------DVATGQEV 48
Query: 127 AIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
AI+++N + E +E+ + +PN+V L EL +V EY+ GSL + +
Sbjct: 49 AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
++ R + L FLH+++ VI+RD K+ NILL + + K++DFG
Sbjct: 109 TETCMDEGQIAAVCR-----ECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 247 L-AKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
A++ P E + ++GT + APE V
Sbjct: 162 FCAQITP---EQSKRSXMVGTPYWMAPEVVT 189
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 67 NGQILETPDLKVFSFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVV 126
+ +ILE K+ S + + K + +G+G G VY G V
Sbjct: 2 DEEILE----KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---------DVATGQEV 48
Query: 127 AIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL 186
AI+++N + E +E+ + +PN+V L EL +V EY+ GSL + +
Sbjct: 49 AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
Query: 187 FRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG 246
++ R + L FLH+++ VI+RD K+ NILL + + K++DFG
Sbjct: 109 TETCMDEGQIAAVCR-----ECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 247 L-AKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
A++ P E + ++GT + APE V
Sbjct: 162 FCAQITP---EQSKRSTMVGTPYWMAPEVVT 189
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 28/195 (14%)
Query: 90 NFKPDSLLGEGGFGRVYKG--WVDDKTLAPSKTGLGMVVAIKKLNPESM---QGFEEWQS 144
NF+ + +G G F VY+ +D G+ VA+KK+ + + +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLD-----------GVPVALKKVQIFDLMDAKARADCIK 81
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL--FRRNPSIQP--LSWDI 200
E++ L +L+HPN++K ED EL +V E G L + F++ + P W
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW-- 139
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
K + L +H+ ++V++RD K +N+ + K+ D GL + ++
Sbjct: 140 --KYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAA 193
Query: 261 TRVMGTYGYAAPEYV 275
++GT Y +PE +
Sbjct: 194 HSLVGTPYYMSPERI 208
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 14/186 (7%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 142
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTY 267
L +LH K +I+RD K NILL+ + + +I+DFG AK L P ++ V GT
Sbjct: 143 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTA 196
Query: 268 GYAAPE 273
Y +PE
Sbjct: 197 QYVSPE 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 14 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 67
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 126
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 127 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 269 YAAPE 273
Y +PE
Sbjct: 182 YVSPE 186
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 142
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 143 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 269 YAAPE 273
Y +PE
Sbjct: 198 YVSPE 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 142
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 143 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 269 YAAPE 273
Y +PE
Sbjct: 198 YVSPE 202
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 90 NFKPDSLLGEGGFGRVY--KGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+F+P LG GGFG V+ K VDD A + L P E+ EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRL----------PNRELAREKVMREVK 55
Query: 148 FLGRLSHPNLVKLLGYCWEDKELL--------LVYEYMQ-----RGSLENHLFRRNPSIQ 194
L +L HP +V+ W +K VY Y+Q + +L++ + R +I+
Sbjct: 56 ALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIE 113
Query: 195 PLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK----- 249
+ L I + A + FLH+ K +++RD K SNI + K+ DFGL
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
Query: 250 ------LGPAGGESHVTTRVMGTYGYAAPEYVATGNFY 281
L P + T +V GT Y +PE + GN Y
Sbjct: 172 EEEQTVLTPMPAYARHTGQV-GTKLYMSPEQIH-GNSY 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 35 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 88
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 147
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 148 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 269 YAAPE 273
Y +PE
Sbjct: 203 YVSPE 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 269 YAAPE 273
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 269 YAAPE 273
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 269 YAAPE 273
Y +PE
Sbjct: 200 YVSPE 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 86
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 145
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 146 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 269 YAAPE 273
Y +PE
Sbjct: 201 YVSPE 205
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNFLGRLS 153
+LG G F V LA K +V AIK + E+++G E ++E+ L ++
Sbjct: 24 DVLGTGAFSEV--------ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V L L L+ + + G L + + + + + ++ +
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDAVK 130
Query: 214 FLHTSEKKVIYRDFKASNIL---LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+LH + +++RD K N+L LD + ISDFGL+K+ G V + GT GY
Sbjct: 131 YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYV 185
Query: 271 APEYVATGNF 280
APE +A +
Sbjct: 186 APEVLAQKPY 195
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKK--LNPESMQGFEEWQSEVNFLGRLSH 154
+GEG +G V+K +VA+K+ L+ + E+ L L H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
N+V+L DK+L LV+E+ + L+ + N + P +I +GLGF
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGF 116
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
H+ + V++RD K N+L++ N K+++FGLA+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
NF+ +LG+G FG+V V + G + A+K L + + ++ + +
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKET---------GDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 150 GRLS----HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL--FRRNPSIQPLSWDIRLK 203
LS HP L +L L V E++ G L H+ RR + +
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY----- 129
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
A L FLH +K +IYRD K N+LLD + K++DFG+ K G G + T
Sbjct: 130 -AAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATF 184
Query: 264 MGTYGYAAPEYV 275
GT Y APE +
Sbjct: 185 CGTPDYIAPEIL 196
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSE 145
A ++ + +LGEG FG VY+G + + G + VA+K + ++ E++ SE
Sbjct: 10 AREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 63
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA 205
+ L HP++VKL+G E++ ++ E G L ++L R S++ L+ + +
Sbjct: 64 AVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYS 119
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + + +L + ++RD NIL+ K+ DFGL++
Sbjct: 120 LQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 269 YAAPE 273
Y +PE
Sbjct: 200 YVSPE 204
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNFLGRLS 153
+LG G F V LA K +V AIK + E+++G E ++E+ L ++
Sbjct: 24 DVLGTGAFSEV--------ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V L L L+ + + G L + + + + + ++ +
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDAVK 130
Query: 214 FLHTSEKKVIYRDFKASNIL---LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+LH + +++RD K N+L LD + ISDFGL+K+ G V + GT GY
Sbjct: 131 YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYV 185
Query: 271 APEYVATGNF 280
APE +A +
Sbjct: 186 APEVLAQKPY 195
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V V + LA S+ ++ + + E+ + + +V
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 144
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 145 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 269 YAAPE 273
Y +PE
Sbjct: 200 YVSPE 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNFLGRLS 153
+LG G F V LA K +V AIK + E+++G E ++E+ L ++
Sbjct: 24 DVLGTGAFSEV--------ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V L L L+ + + G L + + + + + ++ +
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDAVK 130
Query: 214 FLHTSEKKVIYRDFKASNIL---LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+LH + +++RD K N+L LD + ISDFGL+K+ G V + GT GY
Sbjct: 131 YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYV 185
Query: 271 APEYVATGNF 280
APE +A +
Sbjct: 186 APEVLAQKPY 195
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H +
Sbjct: 29 LGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQH 82
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V G+ ++ + +V E +R SL RR +P + +I +G +LH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
+ +VI+RD K N+ L+ + KI DFGLA GE T + GT Y APE ++
Sbjct: 139 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS 194
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H +
Sbjct: 25 LGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQH 78
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V G+ ++ + +V E +R SL RR +P + +I +G +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
+ +VI+RD K N+ L+ + KI DFGLA GE T + GT Y APE ++
Sbjct: 135 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS 190
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QG 138
L++ +F ++G GGFG VY K G + A+K L+ + + QG
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQG 232
Query: 139 FEEWQSEVNFLGRLSHPN--LVKLLGYCWEDKELL-LVYEYMQRGSLENHLFRRNPSIQP 195
+E L +S + + + Y + + L + + M G L HL + +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
D+R A LG H + V+YRD K +NILLD + + +ISD GLA +
Sbjct: 293 ---DMRF---YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKK 345
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ H + +GT+GY APE + G Y SA
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGVAYDSSA 372
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H +
Sbjct: 25 LGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQH 78
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V G+ ++ + +V E +R SL RR +P + +I +G +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
+ +VI+RD K N+ L+ + KI DFGLA GE T + GT Y APE ++
Sbjct: 135 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS 190
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSE 145
A ++ + +LGEG FG VY+G + + G + VA+K + ++ E++ SE
Sbjct: 22 AREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 75
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA 205
+ L HP++VKL+G E++ ++ E G L ++L R S++ L+ + +
Sbjct: 76 AVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYS 131
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + + +L + ++RD NIL+ K+ DFGL++
Sbjct: 132 LQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QG 138
L++ +F ++G GGFG VY K G + A+K L+ + + QG
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQG 232
Query: 139 FEEWQSEVNFLGRLSHPN--LVKLLGYCWEDKELL-LVYEYMQRGSLENHLFRRNPSIQP 195
+E L +S + + + Y + + L + + M G L HL + +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
D+R A LG H + V+YRD K +NILLD + + +ISD GLA +
Sbjct: 293 ---DMRF---YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKK 345
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ H + +GT+GY APE + G Y SA
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGVAYDSSA 372
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QG 138
L++ +F ++G GGFG VY K G + A+K L+ + + QG
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQG 232
Query: 139 FEEWQSEVNFLGRLSHPN--LVKLLGYCWEDKELL-LVYEYMQRGSLENHLFRRNPSIQP 195
+E L +S + + + Y + + L + + M G L HL + +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
D+R A LG H + V+YRD K +NILLD + + +ISD GLA +
Sbjct: 293 ---DMRF---YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKK 345
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ H + +GT+GY APE + G Y SA
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGVAYDSSA 372
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 37/193 (19%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+G+G +G V++G W G VA+K + Q + ++E+ L H
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHD 62
Query: 156 NLVKLLGYCWED-------KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
N+ LG+ D +L L+ Y + GSL + L R Q L + L++A+ A
Sbjct: 63 NI---LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPHLALRLAVSA 114
Query: 209 ARGLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE--SHVT 260
A GL LH + + +RDFK+ N+L+ N I+D GLA + G +
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
Query: 261 TRVMGTYGYAAPE 273
+GT Y APE
Sbjct: 175 NPRVGTKRYMAPE 187
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGL-GMVVAIKKLNPESMQGFE-EWQSEVNFLGRLSH 154
LGEG + VYKG K+ L +VA+K++ E +G EV+ L L H
Sbjct: 10 LGEGTYATVYKG----------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH 59
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
N+V L +K L LV+EY+ + L+ +L I +++L RGL +
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIIN--MHNVKL-FLFQLLRGLAY 115
Query: 215 LHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
H +KV++RD K N+L++ K++DFGLA+
Sbjct: 116 CH--RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFEEWQSE 145
A ++ + +LGEG FG VY+G + + G + VA+K + ++ E++ SE
Sbjct: 6 AREDVVLNRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 59
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIA 205
+ L HP++VKL+G E++ ++ E G L ++L R S++ L+ + +
Sbjct: 60 AVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYS 115
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + + +L + ++RD NIL+ K+ DFGL++
Sbjct: 116 LQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 82 LDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM---QG 138
L++ +F ++G GGFG VY K G + A+K L+ + + QG
Sbjct: 181 LNIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQG 231
Query: 139 FEEWQSEVNFLGRLSHPN--LVKLLGYCWEDKELL-LVYEYMQRGSLENHLFRRNPSIQP 195
+E L +S + + + Y + + L + + M G L HL + +
Sbjct: 232 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 291
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGG 255
D+R A LG H + V+YRD K +NILLD + + +ISD GLA +
Sbjct: 292 ---DMRF---YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKK 344
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ H + +GT+GY APE + G Y SA
Sbjct: 345 KPHAS---VGTHGYMAPEVLQKGVAYDSSA 371
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ---SEVN-FLGR 151
++G+G FG+V L + A+K L +++ +E + SE N L
Sbjct: 45 VIGKGSFGKV---------LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI-AIGAAR 210
+ HP LV L +L V +Y+ G L HL R ++P R + A A
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----RARFYAAEIAS 150
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
LG+LH+ ++YRD K NILLD + ++DFGL K + T+ GT Y
Sbjct: 151 ALGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYL 206
Query: 271 APE 273
APE
Sbjct: 207 APE 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 13 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 109
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 110 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 170 PYVAPELLKRREFH 183
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS---EVNFLGRLS 153
+G+G FG+V K + A+K +N + E ++ E+ + L
Sbjct: 23 IGKGSFGKV---------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 154 HPNLVKLLGYCWEDKE-LLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HP LV L Y ++D+E + +V + + G L HL ++N + + ++L I L
Sbjct: 74 HPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEET--VKLFIC-ELVMAL 128
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
+L +++I+RD K NILLD + + I+DF +A + P E+ +TT + GT Y AP
Sbjct: 129 DYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAP 183
Query: 273 EYVAT 277
E ++
Sbjct: 184 EMFSS 188
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG +G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 111
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 172 PYVAPELLKRREFH 185
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP--------LSWDIRLKIA 205
N+V LLG C + L+++ E+ + G+L +L + P L+ + + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP--------LSWDIRLKIA 205
N+V LLG C + L+++ E+ + G+L +L + P L+ + + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 24/157 (15%)
Query: 136 MQGFEEWQSEVNFLGR--LSHPNLVKLLGYCWEDK------ELLLVYEYMQRGSLENHLF 187
+Q + WQSE + H NL++ + E + EL L+ + +GSL ++L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAA--EKRGSNLEVELWLITAFHDKGSLTDYL- 104
Query: 188 RRNPSIQPLSWDIRLKIAIGAARGLGFLHTS---------EKKVIYRDFKASNILLDGNY 238
++W+ +A +RGL +LH + + +RDFK+ N+LL +
Sbjct: 105 ----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDL 160
Query: 239 NAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
A ++DFGLA G T +GT Y APE +
Sbjct: 161 TAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
EE +E++ L L HPN++KL + K LV E+ + G L + R+ + + +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGN---YNAKISDFGLAKLGPAGGE 256
I +I G+ +LH +++RD K NILL+ N KI DFGL+ +
Sbjct: 151 IMKQI----LSGICYLHKH--NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---K 201
Query: 257 SHVTTRVMGTYGYAAPE 273
+ +GT Y APE
Sbjct: 202 DYKLRDRLGTAYYIAPE 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V+KG +D++T VVAIK ++ E+ E+ Q E+ L +
Sbjct: 31 IGKGSFGEVFKG-IDNRT--------QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+ K G + +L ++ EY+ GS + L R P LK + +GL +L
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGP-FDEFQIATMLKEIL---KGLDYL 136
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H SEKK I+RD KA+N+LL + K++DFG+A G +GT + APE +
Sbjct: 137 H-SEKK-IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 192
Query: 276 ATGNF 280
+
Sbjct: 193 QQSAY 197
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 59 AGVEEASPNGQILETPDLKVF-SFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAP 117
V E +I++ D S D + + + +GEG FG V++G +
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQG------IYM 412
Query: 118 SKTGLGMVVAIKKL-NPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEY 176
S M VAIK N S E++ E + + HP++VKL+G E+ + ++ E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMEL 471
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
G L + L ++ S D+ I + K+ ++RD A N+L+
Sbjct: 472 CTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 526
Query: 237 NYNAKISDFGLAK 249
N K+ DFGL++
Sbjct: 527 NDCVKLGDFGLSR 539
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++FK +LGEG F V + LA S+ ++ + + E+ + + +V
Sbjct: 30 EDFKFGKILGEGSFSTT----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
+ RL HP VKL +D++L Y + G L ++ R+ S + A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSA 142
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
L +LH K +I+RD K NILL+ + + +I+DFG AK+ + +GT
Sbjct: 143 ---LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 269 YAAPE 273
Y +PE
Sbjct: 198 YVSPE 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 24/159 (15%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS---EVNFLGRLS 153
LG+G +G V+K +D +T G VVA+KK+ ++ Q + Q E+ L LS
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKIF-DAFQNSTDAQRTFREIMILTELS 66
Query: 154 -HPNLVKLLGYCW--EDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
H N+V LL D+++ LV++YM+ + H R ++P+ + + +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYME---TDLHAVIRANILEPVH---KQYVVYQLIK 120
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ +LH+ +++RD K SNILL+ + K++DFGL++
Sbjct: 121 VIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVNFLGRLSHP 155
+GEG FG V++G + S M VAIK N S E++ E + + HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
++VKL+G E+ + ++ E G L + L ++ S D+ I
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALA 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP-----------LSWDIRL 202
N+V LLG C + L+++ E+ + G+L +L + P L+ + +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 47/215 (21%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEEWQ-SEVNFLGRLSH 154
+GEG +G VYK ++ G A+KK+ E +G E++ L L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQR----------GSLENHLFRRNPSIQPLSWDIRLKI 204
N+VKL K L+LV+E++ + G LE S+ S+ ++L
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE--------SVTAKSFLLQL-- 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G+ + H +++V++RD K N+L++ KI+DFGLA+ G T +
Sbjct: 110 ----LNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEI 161
Query: 265 GTYGYAAPE-------YVATGNFYLLSAKFGNVIN 292
T Y AP+ Y T + + + F ++N
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP----------LSWDIRLK 203
N+V LLG C + L+++ E+ + G+L +L + P L+ + +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H
Sbjct: 22 FLGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQ 75
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
++V G+ ++ + +V E +R SL RR +P + +I +G +L
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 131
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H + +VI+RD K N+ L+ + KI DFGLA GE + GT Y APE +
Sbjct: 132 HRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVL 187
Query: 276 A 276
+
Sbjct: 188 S 188
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 80 SFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF 139
+FL K+ K D G G V PS G+++A K ++ E
Sbjct: 2 AFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPS----GLIMARKLIHLEIKPAI 57
Query: 140 E-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHL--FRRNPSIQPL 196
+ E+ L + P +V G + D E+ + E+M GSL+ L +R P
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE---- 113
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGG 255
+I K++I RGL +L + ++++RD K SNIL++ K+ DFG++ +L +
Sbjct: 114 --EILGKVSIAVLRGLAYLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 170
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLS 284
S V GT Y APE + ++ + S
Sbjct: 171 NSFV-----GTRSYMAPERLQGTHYSVQS 194
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 47/215 (21%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEEWQ-SEVNFLGRLSH 154
+GEG +G VYK ++ G A+KK+ E +G E++ L L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQR----------GSLENHLFRRNPSIQPLSWDIRLKI 204
N+VKL K L+LV+E++ + G LE S+ S+ ++L
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE--------SVTAKSFLLQL-- 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G+ + H +++V++RD K N+L++ KI+DFGLA+ G T +
Sbjct: 110 ----LNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEV 161
Query: 265 GTYGYAAPE-------YVATGNFYLLSAKFGNVIN 292
T Y AP+ Y T + + + F ++N
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 47/215 (21%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEEWQ-SEVNFLGRLSH 154
+GEG +G VYK ++ G A+KK+ E +G E++ L L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQR----------GSLENHLFRRNPSIQPLSWDIRLKI 204
N+VKL K L+LV+E++ + G LE S+ S+ ++L
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE--------SVTAKSFLLQL-- 109
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
G+ + H +++V++RD K N+L++ KI+DFGLA+ G T +
Sbjct: 110 ----LNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEV 161
Query: 265 GTYGYAAPE-------YVATGNFYLLSAKFGNVIN 292
T Y AP+ Y T + + + F ++N
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNFLGRLS 153
+LG G F V LA K +V AIK + ++++G E ++E+ L ++
Sbjct: 24 DVLGTGAFSEV--------ILAEDKRTQKLV-AIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+V L L L+ + + G L + + + + + ++ +
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDAVK 130
Query: 214 FLHTSEKKVIYRDFKASNIL---LDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+LH + +++RD K N+L LD + ISDFGL+K+ G V + GT GY
Sbjct: 131 YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYV 185
Query: 271 APEYVATGNF 280
APE +A +
Sbjct: 186 APEVLAQKPY 195
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQG-FEEWQSEVNFLGRLSHP 155
LG G FG+V ++ KT VA+K L + SE+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 156 -NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQP------------LSWDIR 201
N+V LLG C + L+++ E+ + G+L +L + P L+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 202 LKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ + A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H
Sbjct: 48 FLGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQ 101
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
++V G+ ++ + +V E +R SL RR +P + +I +G +L
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 157
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
H + +VI+RD K N+ L+ + KI DFGLA GE + GT Y APE +
Sbjct: 158 HRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVL 213
Query: 276 A 276
+
Sbjct: 214 S 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 77 KVFSFLDLKSATKNFKPD-----SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
++ +FL K K D S LG G G V+K V K PS G+V+A K +
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLI 58
Query: 132 NPESMQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR-- 188
+ E + E+ L + P +V G + D E+ + E+M GSL+ L +
Sbjct: 59 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 118
Query: 189 RNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
R P I K++I +GL +L + K+++RD K SNIL++ K+ DFG++
Sbjct: 119 RIPE------QILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Query: 249 -KLGPAGGESHVTTRVMGTYGYAAPEYVATGNFYLLS 284
+L + S V GT Y +PE + ++ + S
Sbjct: 172 GQLIDSMANSFV-----GTRSYMSPERLQGTHYSVQS 203
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+GGF + ++ + D A +K + K L + Q E+ E++ L+H +
Sbjct: 47 LGKGGFAKCFE--ISD---ADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQH 100
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V G+ ++ + +V E +R SL RR +P + +I +G +LH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
+ +VI+RD K N+ L+ + KI DFGLA GE + GT Y APE ++
Sbjct: 157 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLS 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVNFLGRLSHP 155
+GEG FG V++G + S M VAIK N S E++ E + + HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
++VKL+G E+ + ++ E G L + L ++ S D+ I
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALA 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 10 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 114
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE--SHVTTRVM 264
+GL +L + K+++RD K SNIL++ K+ DFG++ G+ + +
Sbjct: 115 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDEMANEFV 167
Query: 265 GTYGYAAPEYVATGNFYLLS 284
GT Y +PE + ++ + S
Sbjct: 168 GTRSYMSPERLQGTHYSVQS 187
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K+ F+ +LG+G FG+V+ S + + A+K L +++ + ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFL------VKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 145 --EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
E + L ++HP +VKL + +L L+ ++++ G L R + + D++
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+A A L LH+ +IYRD K NILLD + K++DFGL+K +
Sbjct: 131 YLA-ELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYS 185
Query: 263 VMGTYGYAAPEYV 275
GT Y APE V
Sbjct: 186 FCGTVEYMAPEVV 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 40/201 (19%)
Query: 90 NFKPDSLLGEGGFGR-VYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
+F P +LG G G VY+G D++ VA+K++ PE F EV
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD-----------VAVKRILPEC---FSFADREVQL 70
Query: 149 LGRLS-HPNLVKLLGYCWE-DKELLLVYEYMQRGSLENHLFRRNPS---IQPLSWDIRLK 203
L HPN+++ +C E D++ + + +L+ ++ +++ + ++P++
Sbjct: 71 LRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT------ 122
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLD-----GNYNAKISDFGLAKLGPAGGESH 258
+ GL LH+ +++RD K NIL+ G A ISDFGL K G H
Sbjct: 123 LLQQTTSGLAHLHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG--RH 178
Query: 259 VTTR---VMGTYGYAAPEYVA 276
+R V GT G+ APE ++
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLS 199
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K+ F+ +LG+G FG+V+ S + + A+K L +++ + ++
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFL------VKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
Query: 145 --EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
E + L ++HP +VKL + +L L+ ++++ G L R + + D++
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 131
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+A A L LH+ +IYRD K NILLD + K++DFGL+K +
Sbjct: 132 YLA-ELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYS 186
Query: 263 VMGTYGYAAPEYV 275
GT Y APE V
Sbjct: 187 FCGTVEYMAPEVV 199
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 100
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 101 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 154
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+G+G G VY G VAI+++N + E +E+ + +PN
Sbjct: 29 IGQGASGTVYTAM---------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V L EL +V EY+ GSL + + ++ R + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGL-AKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+++ VI+R+ K+ NILL + + K++DFG A++ P E + ++GT + APE V
Sbjct: 135 SNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSTMVGTPYWMAPEVV 189
Query: 276 A 276
Sbjct: 190 T 190
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
K+ F+ +LG+G FG+V+ S + + A+K L +++ + ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFL------VKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 145 --EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
E + L ++HP +VKL + +L L+ ++++ G L R + + D++
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR 262
+A A L LH+ +IYRD K NILLD + K++DFGL+K +
Sbjct: 131 YLA-ELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYS 185
Query: 263 VMGTYGYAAPEYV 275
GT Y APE V
Sbjct: 186 FCGTVEYMAPEVV 198
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 32/194 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LGEG G V LA ++ VA+K ++ ++ E + E+ L+H
Sbjct: 14 LGEGAAGEV--------QLAVNRVT-EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+VK G+ E L EY G L F R I+P I + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDR---IEP-------DIGMPEPDAQRFF 110
Query: 216 HTSEKKVIY--------RDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTY 267
H V+Y RD K N+LLD N KISDFGLA + + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 268 GYAAPEYVATGNFY 281
Y APE + F+
Sbjct: 171 PYVAPELLKRREFH 184
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+GL +L + K+++RD K SNIL++ K+ DFG++ +L + S V G
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----G 165
Query: 266 TYGYAAPEYVATGNFYLLS 284
T Y +PE + ++ + S
Sbjct: 166 TRSYMSPERLQGTHYSVQS 184
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 77
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 78 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 131
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 77 KVFSFLDLKSATKNFKPD-----SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
++ +FL K K D S LG G G V+K V K PS G+V+A K +
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLI 101
Query: 132 NPESMQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR-- 188
+ E + E+ L + P +V G + D E+ + E+M GSL+ L +
Sbjct: 102 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 161
Query: 189 RNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
R P I K++I +GL +L + K+++RD K SNIL++ K+ DFG++
Sbjct: 162 RIPE------QILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Query: 249 KLGPAGGE--SHVTTRVMGTYGYAAPEYVATGNFYLLS 284
G+ + +GT Y +PE + ++ + S
Sbjct: 215 ------GQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 246
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 74
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 75 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 128
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+GL +L + K+++RD K SNIL++ K+ DFG++ +L + S V G
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----G 165
Query: 266 TYGYAAPEYVATGNFYLLS 284
T Y +PE + ++ + S
Sbjct: 166 TRSYMSPERLQGTHYSVQS 184
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 77 KVFSFLDLKSATKNFKPD-----SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL 131
++ +FL K K D S LG G G V+K V K PS G+V+A K +
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLI 66
Query: 132 NPESMQGFE-EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR-- 188
+ E + E+ L + P +V G + D E+ + E+M GSL+ L +
Sbjct: 67 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 126
Query: 189 RNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
R P I K++I +GL +L + K+++RD K SNIL++ K+ DFG++
Sbjct: 127 RIPE------QILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Query: 249 -KLGPAGGESHVTTRVMGTYGYAAPEYVATGNFYLLS 284
+L + S V GT Y +PE + ++ + S
Sbjct: 180 GQLIDSMANSFV-----GTRSYMSPERLQGTHYSVQS 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+GL +L + K+++RD K SNIL++ K+ DFG++ +L + S V G
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----G 165
Query: 266 TYGYAAPEYVATGNFYLLS 284
T Y +PE + ++ + S
Sbjct: 166 TRSYMSPERLQGTHYSVQS 184
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 72
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 69
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 70 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 123
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+GL +L + K+++RD K SNIL++ K+ DFG++ +L + S V G
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----G 165
Query: 266 TYGYAAPEYVATGNFYLLS 284
T Y +PE + ++ + S
Sbjct: 166 TRSYMSPERLQGTHYSVQS 184
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE-EWQSEVNF 148
+F+ S LG G G V+K V K PS G+V+A K ++ E + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PS----GLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFR--RNPSIQPLSWDIRLKIAI 206
L + P +V G + D E+ + E+M GSL+ L + R P I K++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSI 111
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMG 265
+GL +L + K+++RD K SNIL++ K+ DFG++ +L + S V G
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----G 165
Query: 266 TYGYAAPEYVATGNFYLLS 284
T Y +PE + ++ + S
Sbjct: 166 TRSYMSPERLQGTHYSVQS 184
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG FG V++G ++P L + + K N S E++ E + + HP+
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 75
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+VKL+G E+ + ++ E G L + L ++ S D+ I +
Sbjct: 76 IVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 129
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
K+ ++RD A N+L+ N K+ DFGL++
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 14/193 (7%)
Query: 59 AGVEEASPNGQILETPDLKVF-SFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAP 117
V E +I++ D S D + + + +GEG FG V++G +
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQG------IYM 412
Query: 118 SKTGLGMVVAIKKL-NPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEY 176
S M VAIK N S E++ E + + HP++VKL+G E+ + ++ E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMEL 471
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
G L + L ++ S D+ I + K+ ++RD A N+L+
Sbjct: 472 CTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 526
Query: 237 NYNAKISDFGLAK 249
K+ DFGL++
Sbjct: 527 TDCVKLGDFGLSR 539
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNF 148
+++ ++G G V + AP K VAIK++N E Q +E E+
Sbjct: 11 DYELQEVIGSGATAVVQAAYC-----APKKEK----VAIKRINLEKCQTSMDELLKEIQA 61
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN---HLFRRNPSIQ-PLSWDIRLKI 204
+ + HPN+V EL LV + + GS+ + H+ + L I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE---SHVTT 261
GL +LH + + I+RD KA NILL + + +I+DFG++ GG+ + V
Sbjct: 122 LREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 262 RVMGTYGYAAPE 273
+GT + APE
Sbjct: 180 TFVGTPCWMAPE 191
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQ-GFEEWQSEVNF 148
+++ ++G G V + AP K VAIK++N E Q +E E+
Sbjct: 16 DYELQEVIGSGATAVVQAAYC-----APKKEK----VAIKRINLEKCQTSMDELLKEIQA 66
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN---HLFRRNPSIQ-PLSWDIRLKI 204
+ + HPN+V EL LV + + GS+ + H+ + L I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE---SHVTT 261
GL +LH + + I+RD KA NILL + + +I+DFG++ GG+ + V
Sbjct: 127 LREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 262 RVMGTYGYAAPEYV 275
+GT + APE +
Sbjct: 185 TFVGTPCWMAPEVM 198
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS--- 144
+ +K +LG+G FG V L K G A+K ++ ++ + +S
Sbjct: 25 SDRYKGQRVLGKGSFGEV--------ILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L +L HPN++KL + +EDK LV E G L + + R + S +
Sbjct: 76 EVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAAR 130
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVT 260
I G+ ++H + K+++RD K N+LL+ + N +I DFGL+ A S
Sbjct: 131 IIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKM 185
Query: 261 TRVMGTYGYAAPE 273
+GT Y APE
Sbjct: 186 KDKIGTAYYIAPE 198
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEWQSEVNFLGRLSHP 155
+GEG FG V++G + S M VAIK N S E++ E + + HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
++VKL+G E+ + ++ E G L + L ++ S D+ I
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALA 125
Query: 216 HTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+ K+ ++RD A N+L+ K+ DFGL++
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS--- 144
+ +K +LG+G FG V L K G A+K ++ ++ + +S
Sbjct: 49 SDRYKGQRVLGKGSFGEV--------ILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 99
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
EV L +L HPN++KL + + LV E G L + + R + S +I
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARI 155
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTT 261
G+ ++H + K+++RD K N+LL+ + N +I DFGL+ A S
Sbjct: 156 IRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMK 210
Query: 262 RVMGTYGYAAPE 273
+GT Y APE
Sbjct: 211 DKIGTAYYIAPE 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS--- 144
+ +K +LG+G FG V L K G A+K ++ ++ + +S
Sbjct: 48 SDRYKGQRVLGKGSFGEV--------ILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 98
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
EV L +L HPN++KL + + LV E G L + + R + S +I
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARI 154
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTT 261
G+ ++H + K+++RD K N+LL+ + N +I DFGL+ A S
Sbjct: 155 IRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMK 209
Query: 262 RVMGTYGYAAPE 273
+GT Y APE
Sbjct: 210 DKIGTAYYIAPE 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS--- 144
+ +K +LG+G FG V L K G A+K ++ ++ + +S
Sbjct: 31 SDRYKGQRVLGKGSFGEV--------ILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 81
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV L +L HPN++KL + +EDK LV E G L + + R + S +
Sbjct: 82 EVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAAR 136
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVT 260
I G+ ++H + K+++RD K N+LL+ + N +I DFGL+ A S
Sbjct: 137 IIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKM 191
Query: 261 TRVMGTYGYAAPE 273
+GT Y APE
Sbjct: 192 KDKIGTAYYIAPE 204
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
+ F+ + + G+G FG V G + GM VAIKK+ + E Q
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRELQI 69
Query: 145 EVNFLGRLSHPNLVKLLGYCW-------EDKELLLVYEYMQ---RGSLENHLFRRNPSIQ 194
+ L L HPN+V+L Y + D L +V EY+ N+ +RR +
Sbjct: 70 -MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY-YRRQVAPP 127
Query: 195 PLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLA-KLGP 252
P+ + L I R +G LH V +RD K N+L+ + + K+ DFG A KL P
Sbjct: 128 PILIKVFLFQLI---RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184
Query: 253 AGGE-SHVTTRVMGTYGYAAPEYVATGNFYLLSAKFGNV 290
+ +++ +R Y APE + Y + +V
Sbjct: 185 SEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSV 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
EE + EVN L + HPN++ L +++L+ E + G L + L + + L+ D
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTED 115
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI-LLDGNY---NAKISDFGLAKLGPAGG 255
+ G+ +LH+ K++ + D K NI LLD N K+ DFG+A AG
Sbjct: 116 EATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 256 ESHVTTRVMGTYGYAAPEYV 275
E + GT + APE V
Sbjct: 174 E---FKNIFGTPEFVAPEIV 190
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSH 154
+G+G FG V++G W G VA+K + E F E +E+ L H
Sbjct: 37 IGKGRFGEVWRGKW------------RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRH 82
Query: 155 PNLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 137
Query: 211 GLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTR 262
GL LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 263 VMGTYGYAAPE 273
+GT Y APE
Sbjct: 198 RVGTKRYMAPE 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V++G G VA+K + E F E +E+ L H
Sbjct: 12 IGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHE 58
Query: 156 NLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A G
Sbjct: 59 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 113
Query: 212 LGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTRV 263
L LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 264 MGTYGYAAPE 273
+GT Y APE
Sbjct: 174 VGTKRYMAPE 183
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
EE + EVN L + HPN++ L +++L+ E + G L + L + + L+ D
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTED 108
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI-LLDGNY---NAKISDFGLAKLGPAGG 255
+ G+ +LH+ K++ + D K NI LLD N K+ DFG+A AG
Sbjct: 109 EATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166
Query: 256 ESHVTTRVMGTYGYAAPEYV 275
E + GT + APE V
Sbjct: 167 E---FKNIFGTPEFVAPEIV 183
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSH 154
+G+G FG V++G W G VA+K + E F E +E+ L H
Sbjct: 17 IGKGRFGEVWRGKW------------RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRH 62
Query: 155 PNLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 117
Query: 211 GLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTR 262
GL LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 263 VMGTYGYAAPE 273
+GT Y APE
Sbjct: 178 RVGTKRYMAPE 188
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSHP 155
+G+G FG V++G G VA+K + E F E +E+ L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHE 57
Query: 156 NLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A G
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 112
Query: 212 LGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTRV 263
L LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 264 MGTYGYAAPE 273
+GT Y APE
Sbjct: 173 VGTKRYMAPE 182
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSH 154
+G+G FG V++G W G VA+K + E F E +E+ L H
Sbjct: 14 IGKGRFGEVWRGKW------------RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRH 59
Query: 155 PNLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 114
Query: 211 GLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTR 262
GL LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 263 VMGTYGYAAPE 273
+GT Y APE
Sbjct: 175 RVGTKRYMAPE 185
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
EE + EVN L + HPN++ L +++L+ E + G L + L + + L+ D
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTED 129
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI-LLDGNY---NAKISDFGLAKLGPAGG 255
+ G+ +LH+ K++ + D K NI LLD N K+ DFG+A AG
Sbjct: 130 EATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 256 ESHVTTRVMGTYGYAAPEYV 275
E + GT + APE V
Sbjct: 188 E---FKNIFGTPEFVAPEIV 204
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSEVNFLGRLSH 154
+G+G FG V++G W G VA+K + E F E +E+ L H
Sbjct: 50 IGKGRFGEVWRGKW------------RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRH 95
Query: 155 PNLVKLLGYCWEDK----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAAR 210
N++ + +D +L LV +Y + GSL ++L R +++ + +K+A+ A
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 150
Query: 211 GLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES--HVTTR 262
GL LH + + +RD K+ NIL+ N I+D GLA + ++
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 263 VMGTYGYAAPEYV 275
+GT Y APE +
Sbjct: 211 RVGTKRYMAPEVL 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G VA+KK++ Q E +EV + H N+V + EL +V E+++ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + R L +LH + VI+RD K+ +ILL + K+
Sbjct: 130 TDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKL 182
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 183 SDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVIS 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ +G G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EYM G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D K++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN-- 147
F+ LG G FGRV + G A+K L+ + + +E + +N
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 148 -FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFGLAK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L RLSHPN++KL E+ LV E + G L + + + + + D
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHV 259
+I + +LH E +++RD K N+L + KI+DFGL+K+ E V
Sbjct: 156 QI----LEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI----VEHQV 205
Query: 260 TTR-VMGTYGYAAPE 273
+ V GT GY APE
Sbjct: 206 LMKTVCGTPGYCAPE 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ +G G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EYM G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D K++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFE 140
D+ + F +LG+G FG V + + + G + VA+K L + + E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLK------QEDGSFVKVAVKMLKADIIASSDIE 70
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEYMQRGSLENHLFR----RN 190
E+ E + HP++ KL+G + +++ +M+ G L L N
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 191 PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
P PL +R + I G + S + I+RD A N +L + ++DFGL++
Sbjct: 131 PFNLPLQTLVRFMVDIAC----GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM-QGFEE 141
D K ++ +G GGF +V LA G +VAIK ++ ++
Sbjct: 4 DYDELLKYYELHETIGTGGFAKV--------KLA-CHILTGEMVAIKIMDKNTLGSDLPR 54
Query: 142 WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
++E+ L L H ++ +L ++ +V EY G L +++ ++ + + +
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF 114
Query: 202 LKI--AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHV 259
+I A+ G+ H RD K N+L D + K+ DFGL P G + +
Sbjct: 115 RQIVSAVAYVHSQGYAH--------RDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYH 165
Query: 260 TTRVMGTYGYAAPEYVATGNFYL 282
G+ YAAPE + G YL
Sbjct: 166 LQTCCGSLAYAAPELI-QGKSYL 187
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ--SEVNFLGRLS 153
+LG+G FG V K D+ A+K +N S + + EV L +L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++KL + +V E G L + + +R + S +I G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGIT 135
Query: 214 FLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
++H + +++RD K NILL+ + + KI DFGL+ + + R+ GT Y
Sbjct: 136 YMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 271 APEYV 275
APE +
Sbjct: 191 APEVL 195
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS--- 144
+ +K +LG+G FG V L K G A+K ++ ++ + +S
Sbjct: 25 SDRYKGQRVLGKGSFGEV--------ILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKI 204
EV L +L HPN+ KL + + LV E G L + + R + S +I
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARI 131
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTT 261
G+ + H + K+++RD K N+LL+ + N +I DFGL+ A S
Sbjct: 132 IRQVLSGITYXHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKXK 186
Query: 262 RVMGTYGYAAPE 273
+GT Y APE
Sbjct: 187 DKIGTAYYIAPE 198
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 105 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 157
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 158 SDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 109 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 161
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 162 SDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 193
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ--SEVNFLGRLS 153
+LG+G FG V K D+ A+K +N S + + EV L +L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++KL + +V E G L + + +R + S +I G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGIT 135
Query: 214 FLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
++H + +++RD K NILL+ + + KI DFGL+ + + R+ GT Y
Sbjct: 136 YMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 271 APE 273
APE
Sbjct: 191 APE 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 70 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 176
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 177 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCGTPEYLAPE 229
Query: 274 YVATGNF 280
+ + +
Sbjct: 230 IILSKGY 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPEYVATGNFY 281
TR Y APE + Y
Sbjct: 185 TR-----WYRAPEIMLNAMHY 200
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN-- 147
F+ LG G FGRV + G A+K L+ + + +E + +N
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 148 -FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D +++DFGLAK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ--SEVNFLGRLS 153
+LG+G FG V K D+ A+K +N S + + EV L +L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN++KL + +V E G L + + +R + S +I G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGIT 135
Query: 214 FLHTSEKKVIYRDFKASNILLDG---NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
++H + +++RD K NILL+ + + KI DFGL+ + + R+ GT Y
Sbjct: 136 YMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 271 APE 273
APE
Sbjct: 191 APE 193
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 70 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FE 176
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 177 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 229
Query: 274 YVATGNF 280
+ + +
Sbjct: 230 IILSKGY 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 44 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FE 150
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 151 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 203
Query: 274 YVATGNF 280
+ + +
Sbjct: 204 IILSKGY 210
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 116 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 168
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 169 SDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 200
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 43/218 (19%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
+F+ ++LG+G FG+V K + S+ AIKK+ + + SEV L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA----RNALDSR-----YYAIKKIR-HTEEKLSTILSEVMLL 56
Query: 150 GRLSHP-------------NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPL 196
L+H N VK + + L + EY + G+L + + N + Q
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 197 S-WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA------- 248
W + +I L ++H+ + +I+RD K NI +D + N KI DFGLA
Sbjct: 117 EYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 249 ---KLGPAG--GESHVTTRVMGTYGYAAPEYV-ATGNF 280
KL G S T +GT Y A E + TG++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 114 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 166
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 167 SDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 198
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE- 141
DL+ ++++ ++G G FG V L K+ V A+K L+ M +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRK-VYAMKLLSKFEMIKRSDS 118
Query: 142 ---WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLS 197
W+ E + + + P +V+L +D+ L +V EYM G L N + + P
Sbjct: 119 AFFWE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 177
Query: 198 WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES 257
+ + +A+ A +GF+H RD K N+LLD + + K++DFG G
Sbjct: 178 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 258 HVTTRVMGTYGYAAPEYVAT 277
T V GT Y +PE + +
Sbjct: 230 RCDTAV-GTPDYISPEVLKS 248
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 35 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 146 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 194
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 195 PEYLAPEIILSKGY 208
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE- 141
DL+ ++++ ++G G FG V L K+ V A+K L+ M +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRK-VYAMKLLSKFEMIKRSDS 118
Query: 142 ---WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLS 197
W+ E + + + P +V+L +D+ L +V EYM G L N + + P
Sbjct: 119 AFFWE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 177
Query: 198 WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES 257
+ + +A+ A +GF+H RD K N+LLD + + K++DFG G
Sbjct: 178 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 258 HVTTRVMGTYGYAAPEYVAT 277
T V GT Y +PE + +
Sbjct: 230 RCDTAV-GTPDYISPEVLKS 248
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 50 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 209
Query: 274 YVATGNF 280
+ + +
Sbjct: 210 IILSKGY 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE- 141
DL+ ++++ ++G G FG V L K+ V A+K L+ M +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRK-VYAMKLLSKFEMIKRSDS 113
Query: 142 ---WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLS 197
W+ E + + + P +V+L +D+ L +V EYM G L N + + P
Sbjct: 114 AFFWE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 172
Query: 198 WDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGES 257
+ + +A+ A +GF+H RD K N+LLD + + K++DFG G
Sbjct: 173 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 258 HVTTRVMGTYGYAAPEYVAT 277
T V GT Y +PE + +
Sbjct: 225 RCDTAV-GTPDYISPEVLKS 243
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 142 WQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLSWDI 200
W+ E + + + P +V+L +DK L +V EYM G L N + + P +
Sbjct: 123 WE-ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA 181
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ +A+ A +G +H RD K N+LLD + + K++DFG G H
Sbjct: 182 EVVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 261 TRVMGTYGYAAPEYVAT 277
T V GT Y +PE + +
Sbjct: 234 TAV-GTPDYISPEVLKS 249
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ +G G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D K++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLAGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI-KKLNPESMQGFEEWQSEVNF 148
F+ LG G FGRV + +TG + I K ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRVM-------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 ---FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 269 YAAPEYVATGNF 280
Y APE + + +
Sbjct: 204 YLAPEIILSKGY 215
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI-KKLNPESMQGFEEWQSEVNF 148
F+ LG G FGRV + +TG + I K ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRVM-------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 ---FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 269 YAAPEYVATGNF 280
Y APE + + +
Sbjct: 204 YLAPEIILSKGY 215
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAI-KKLNPESMQGFEEWQSEVNF 148
F+ LG G FGRV + +TG + I K ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRVM-------LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 ---FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 269 YAAPEYVATGNF 280
Y APE + + +
Sbjct: 204 YLAPEIILSKGY 215
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLXGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V++ ++ G A K + E + E+ + L HP
Sbjct: 59 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV L +D E++++YE+M G L + + +S D ++ +GL +H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH 166
Query: 217 TSEKKVIYRDFKASNILLDGNYNA--KISDFGL-AKLGPAGGESHVTTRVMGTYGYAAPE 273
E ++ D K NI+ + K+ DFGL A L P VTT GT +AAPE
Sbjct: 167 --ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPE 220
Query: 274 YVATG 278
VA G
Sbjct: 221 -VAEG 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 86 SATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS- 144
++ ++ + LGEG +G VYK +D T VAIK++ E + +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA-IDTVT--------NETVAIKRIRLEHEEEGVPGTAI 81
Query: 145 -EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
EV+ L L H N+++L + L L++EY + L+ ++ +NP + S +
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM-DKNPDV---SMRVIKS 136
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILL---DGNYNA--KISDFGLAKLGPAGGESH 258
G+ F H+ ++ ++RD K N+LL D + KI DFGLA+ G
Sbjct: 137 FLYQLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA--FGIPIR 192
Query: 259 VTTRVMGTYGYAAPEYVATGNFYLLSAKFGNVINVCMY 296
T + T Y PE + Y S ++ C++
Sbjct: 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSI--ACIW 228
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 36 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 142
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 143 YLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 195
Query: 274 YVATGNF 280
+ + +
Sbjct: 196 IILSKGY 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 30 QNLSP---IGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 131
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 132 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 190 TR-----WYRAPE 197
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 63 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 174 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 222
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 223 PEYLAPEIILSKGY 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 35 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 146 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 194
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 195 PEYLAPEIILSKGY 208
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + + + ++ + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 159 TDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 211
Query: 243 SDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVA 276
SDFG E ++GT + APE ++
Sbjct: 212 SDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 243
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G FG V++ ++ G A K + E + E+ + L HP
Sbjct: 165 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV L +D E++++YE+M G L + + +S D ++ +GL +H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH 272
Query: 217 TSEKKVIYRDFKASNILLDGNYNA--KISDFGL-AKLGPAGGESHVTTRVMGTYGYAAPE 273
E ++ D K NI+ + K+ DFGL A L P VTT GT +AAPE
Sbjct: 273 --ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPE 326
Query: 274 YVATG 278
VA G
Sbjct: 327 -VAEG 330
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 37 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 138
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 139 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 197 TR-----WYRAPE 204
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 28 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 139 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGT 187
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 188 PEYLAPEIILSKGY 201
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 48 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 149
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 150 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA 207
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 208 TR-----WYRAPE 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 30 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 131
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 132 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 190 TR-----WYRAPE 197
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 32 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 133
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 134 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 192 TR-----WYRAPE 199
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LG+G +G VY G + L+ + +AIK++ + + E+ L H
Sbjct: 29 VLGKGTYGIVYAG----RDLSNQ-----VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+V+ LG E+ + + E + GSL L + ++ I GL +L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYL 138
Query: 216 HTSEKKVIYRDFKASNILLDGNYNA--KISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H + ++++RD K N+L++ Y+ KISDFG +K G + T GT Y APE
Sbjct: 139 H--DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPE 193
Query: 274 YVATG 278
+ G
Sbjct: 194 IIDKG 198
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
+LG+G +G VY G + L+ + +AIK++ + + E+ L H
Sbjct: 15 VLGKGTYGIVYAG----RDLSNQ-----VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 156 NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
N+V+ LG E+ + + E + GSL L + ++ I GL +L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYL 124
Query: 216 HTSEKKVIYRDFKASNILLDGNYNA--KISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
H + ++++RD K N+L++ Y+ KISDFG +K G + T GT Y APE
Sbjct: 125 H--DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPE 179
Query: 274 YVATG 278
+ G
Sbjct: 180 IIDKG 184
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
L E G ++KG W G +VV + K+ S + ++ E L SHP
Sbjct: 18 LNENHSGELWKGRW----------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 156 NLVKLLGYCWEDK--ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
N++ +LG C L+ +M GSL N L + S + K A+ ARG+
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAV--KFALDMARGMA 125
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
FLHT E + + ++++D + A+IS
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 32 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 133
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 134 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 192 TR-----WYRAPE 199
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 36 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 137
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 138 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 195
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 196 TR-----WYRAPE 203
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 32 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 133
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 134 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 192 TR-----WYRAPE 199
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+++D +++DFG AK T + GT Y APE
Sbjct: 156 YLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPE 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IIISKGY 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 30 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 131
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 132 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 190 TR-----WYRAPE 197
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 31 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 132
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 133 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 191 TR-----WYRAPE 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 27 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 128
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 129 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 187 TR-----WYRAPE 194
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 32 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 133
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 134 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 192 TR-----WYRAPE 199
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 37 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 138
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 139 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 197 TR-----WYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 37 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 138
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 139 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 197 TR-----WYRAPE 204
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 31 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 132
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 133 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 191 TR-----WYRAPE 198
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 23 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 124
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 125 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 182
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 183 TR-----WYRAPE 190
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 30 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 131
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 132 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 190 TR-----WYRAPE 197
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 24 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 125
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 126 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 184 TR-----WYRAPE 191
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 44 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 145
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 146 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 204 TR-----WYRAPE 211
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 123 GMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL 182
G +VA+KK++ Q E +EV + H N+V++ EL +V E+++ G+L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 183 ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKI 242
+ + ++ + + + + L LH + VI+RD K+ +ILL + K+
Sbjct: 236 TDIVTHTR-----MNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKL 288
Query: 243 SDFGLAKLGPAGGESHVTTR--VMGTYGYAAPEYVA 276
SDFG A V R ++GT + APE ++
Sbjct: 289 SDFGFC----AQVSKEVPRRKXLVGTPYWMAPELIS 320
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 22 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 123
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 124 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 182 TR-----WYRAPE 189
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 36 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 137
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 138 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 195
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 196 TR-----WYRAPE 203
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 45 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 146
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 147 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 205 TR-----WYRAPE 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 31 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 132
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 133 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 191 TR-----WYRAPE 198
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 27 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 128
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 129 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 187 TR-----WYRAPE 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 27 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 128
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 129 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 187 TR-----WYRAPE 194
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 22 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 123
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 124 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 182 TR-----WYRAPE 189
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 21 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 122
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 123 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 181 TR-----WYRAPE 188
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 123 GMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCW------EDKELLLVY 174
G VAIKK+ + + + E+ L H N++ + E K + +V
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 175 EYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
+ M E+ L + S QPL+ + RGL ++H+++ VI+RD K SN+L+
Sbjct: 139 DLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLV 191
Query: 235 DGNYNAKISDFGLAK---LGPAGGESHVTTRVMGTYGYAAPEYVATGNFY 281
+ N KI DFG+A+ PA + + T + T Y APE + + + Y
Sbjct: 192 NENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRAPELMLSLHEY 240
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 27 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 128
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 129 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 187 TR-----WYRAPE 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 48 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 149
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 150 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 208 TR-----WYRAPE 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
EE + EV+ L ++ HPN++ L +++L+ E + G L + L ++ + LS +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEE 115
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI-LLDGNY---NAKISDFGLAKLGPAGG 255
G+ +LHT KK+ + D K NI LLD N + K+ DFGLA G
Sbjct: 116 EATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 256 ESHVTTRVMGTYGYAAPEYV 275
E + GT + APE V
Sbjct: 174 E---FKNIFGTPEFVAPEIV 190
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G +G V DK + + IKK + + EV L +L HPN
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERA----IKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
++KL + + + LV E + G L + + R Q S I G +LH
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLH 138
Query: 217 TSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+ +++RD K N+LL+ KI DFGL+ GG+ +GT Y APE
Sbjct: 139 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE 193
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 77 KVFSFLDLKSATKNFKPDSL---------LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVA 127
KVF F DL ++ P +L LG G G V K + KT K +++
Sbjct: 128 KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV-KLAFERKT---CKKVAIRIIS 183
Query: 128 IKKLNPESMQGFE---EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+K S + + ++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L +
Sbjct: 184 KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD 242
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AK 241
+ N ++ + + + A + +LH E +I+RD K N+LL K
Sbjct: 243 KVVG-NKRLKEATCKLYFYQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIK 296
Query: 242 ISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVAT 277
I+DFG +K+ GE+ + + GT Y APE + +
Sbjct: 297 ITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVS 329
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIK---KLNPESMQ---GFEEWQSEVNFLG 150
L +G F ++ D+K A K ++ + K N + + ++++++E+ +
Sbjct: 39 LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98
Query: 151 RLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL---ENHLFRRNPSIQPLSWDIRLKIAIG 207
+ + + G E+ ++YEYM+ S+ + + F + + +K I
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158
Query: 208 AA-RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV--- 263
+ ++H +EK + +RD K SNIL+D N K+SDFG E V ++
Sbjct: 159 SVLNSFSYIH-NEKNICHRDVKPSNILMDKNGRVKLSDFG-------ESEYMVDKKIKGS 210
Query: 264 MGTYGYAAPEYVATGNFY 281
GTY + PE+ + + Y
Sbjct: 211 RGTYEFMPPEFFSNESSY 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G +G V DK + + IKK + + EV L +L HPN
Sbjct: 12 LGSGAYGEVL--LCKDKLTGAERA----IKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
++KL + + + LV E + G L + + R Q S I G +LH
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLH 121
Query: 217 TSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+ +++RD K N+LL+ KI DFGL+ GG+ +GT Y APE
Sbjct: 122 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE 176
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGFEEWQSEVNFLGRLSHP 155
LG G FG V++ + G V K +N P + + ++E++ + +L HP
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYT-VKNEISIMNQLHHP 108
Query: 156 NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
L+ L +EDK E++L+ E++ G L + + + +S + A GL
Sbjct: 109 KLINLHD-AFEDKYEMVLILEFLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKH 164
Query: 215 LHTSEKKVIYRDFKASNILLDGNY--NAKISDFGLA-KLGPAGGESHVTTRVMGTYGYAA 271
+H E +++ D K NI+ + + KI DFGLA KL P + T +AA
Sbjct: 165 MH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAA 218
Query: 272 PEYV 275
PE V
Sbjct: 219 PEIV 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 123 GMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCW------EDKELLLVY 174
G VAIKK+ + + + E+ L H N++ + E K + +V
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 175 EYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
+ M E+ L + S QPL+ + RGL ++H+++ VI+RD K SN+L+
Sbjct: 140 DLM-----ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLV 192
Query: 235 DGNYNAKISDFGLAK---LGPAGGESHVTTRVMGTYGYAAPEYVATGNFY 281
+ N KI DFG+A+ PA + + T + T Y APE + + + Y
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRAPELMLSLHEY 241
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 77 KVFSFLDLKSATKNFKPDSL---------LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVA 127
KVF F DL ++ P +L LG G G V K + KT K +++
Sbjct: 114 KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV-KLAFERKT---CKKVAIRIIS 169
Query: 128 IKKLNPESMQGFE---EWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+K S + + ++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L +
Sbjct: 170 KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD 228
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AK 241
+ N ++ + + + A + +LH E +I+RD K N+LL K
Sbjct: 229 KVVG-NKRLKEATCKLYFYQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIK 282
Query: 242 ISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYVAT 277
I+DFG +K+ GE+ + + GT Y APE + +
Sbjct: 283 ITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVS 315
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEE-WQSEVN 147
K F+ LG G F V LA K G + A+K + ++++G E ++E+
Sbjct: 22 KIFEFKETLGTGAFSEV--------VLAEEK-ATGKLFAVKCIPKKALKGKESSIENEIA 72
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIG 207
L ++ H N+V L L LV + + G L + + + + + + ++
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL-- 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILL---DGNYNAKISDFGLAKLGPAGGESHVTTRVM 264
+ +LH +++RD K N+L D ISDFGL+K+ G+ V +
Sbjct: 131 --DAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKME---GKGDVMSTAC 183
Query: 265 GTYGYAAPEYVA 276
GT GY APE +A
Sbjct: 184 GTPGYVAPEVLA 195
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P L KL ++ L +V EY G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 42 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D +++DFG AK T + GT
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLCGT 201
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 202 PEYLAPEIILSKGY 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ--SEVN 147
+F + L G GR G V+ PS G ++A+K++ ++ E+ Q +++
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPS----GQIMAVKRIR-STVDEKEQKQLLMDLD 72
Query: 148 FLGRLSH-PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
+ R S P +V+ G + + + + E M + + + + + +I KI +
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITL 132
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+ L L + K+I+RD K SNILLD + N K+ DFG++ +S TR G
Sbjct: 133 ATVKALNHLKEN-LKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGC 188
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 189 RPYMAPERI 197
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI D+GLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVN 147
N++ L+G G +G VY + DK + VAIKK+N E + + E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY--DKNANKN-------VAIKKVNRMFEDLIDCKRILREIT 79
Query: 148 FLGRLSHPNLVKLLGYCW-ED----KELLLVYEYMQ---RGSLENHLFRRNPSIQPLSWD 199
L RL +++L ED EL +V E + + +F ++ + ++
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHV 259
+ L G F+H E +I+RD K +N LL+ + + KI DFGLA+ + + H+
Sbjct: 140 LLL--------GEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
Query: 260 TTRVMGTYGYAAP 272
+ P
Sbjct: 190 VNDLEEKEENEEP 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P L KL ++ L +V EY G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
L ++ P L KL ++ L +V EY G + +HL R +P + +I +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+++D K++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRL 152
S +G G +G V + D K+ G+ +A+KKL+ +S+ + E+ L +
Sbjct: 57 SPVGSGAYGSVCSSY-DVKS--------GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 153 SHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
H N++ LL E ++ LV M G+ N++ + Q L+ D +
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 161
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V TR
Sbjct: 162 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 215
Query: 267 YGYAAPEYVATGNFYLLSAKFGNV 290
Y APE + Y ++ +V
Sbjct: 216 -WYRAPEIMLNWMHYNMTVDIWSV 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 21 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 122
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 123 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 181 TR-----WYRAPE 188
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 45 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 146
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 147 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 205 TR-----WYRAPE 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 31 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 132
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 133 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 191 TR-----WYRAPE 198
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 44 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 145
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 146 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 204 TR-----WYRAPE 211
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 35 QNLAP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 82
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 136
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ +V
Sbjct: 137 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 194
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 195 TR-----WYRAPE 202
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEW 142
DL S + KP LG GG G V+ +D VAIKK+ Q +
Sbjct: 8 DLGSRYMDLKP---LGCGGNGLVFSAVDND---------CDKRVAIKKIVLTDPQSVKHA 55
Query: 143 QSEVNFLGRLSHPNLVKL--------------LGYCWEDKELLLVYEYMQRGSLENHLFR 188
E+ + RL H N+VK+ +G E + +V EYM+ L N +
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLAN-VLE 113
Query: 189 RNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG-NYNAKISDFGL 247
+ P ++ + ++ RGL ++H++ V++RD K +N+ ++ + KI DFGL
Sbjct: 114 QGPLLEEHARLFMYQL----LRGLKYIHSA--NVLHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 248 AK-LGPAGGESHVTTRVMGTYGYAAPEYVATGNFY 281
A+ + P + + T Y +P + + N Y
Sbjct: 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 41/217 (18%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFL 149
+F+ ++LG+G FG+V K + S+ AIKK+ + + SEV L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA----RNALDSR-----YYAIKKIR-HTEEKLSTILSEVMLL 56
Query: 150 GRLSHP-------------NLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPL 196
L+H N VK + + L + EY + +L + + N + Q
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR- 115
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-------- 248
D ++ L ++H+ + +I+RD K NI +D + N KI DFGLA
Sbjct: 116 --DEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 249 --KLGPAG--GESHVTTRVMGTYGYAAPEYV-ATGNF 280
KL G S T +GT Y A E + TG++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+LH+ + +IYRD K N+L+D +++DFG AK T + GT Y AP
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPA 208
Query: 274 YVATGNF 280
+ + +
Sbjct: 209 IILSKGY 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 125 VVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+V + K E+ + E + L HP++V+LL D L +V+E+M L
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA---K 241
+ +R + S + L + H + +I+RD K N+LL N+ K
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCH--DNNIIHRDVKPENVLLASKENSAPVK 173
Query: 242 ISDFGLA-KLGPAGGESHVTTRVMGTYGYAAPEYV 275
+ DFG+A +LG +G V +GT + APE V
Sbjct: 174 LGDFGVAIQLGESG---LVAGGRVGTPHFMAPEVV 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEV 146
F+ LG G FGRV + G A+K L+ + ++ E +E
Sbjct: 43 QFERIRTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI 206
++ P LVKL ++ L +V EY G + +HL R +P + +I +
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGT 266
+LH+ + +IYRD K N+L+D K++DFG AK T + GT
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGT 202
Query: 267 YGYAAPEYVATGNF 280
Y APE + + +
Sbjct: 203 PEYLAPEIILSKGY 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L + + N ++ + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYF 126
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHV 259
+ A + +LH E +I+RD K N+LL KI+DFG +K+ GE+ +
Sbjct: 127 YQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 178
Query: 260 TTRVMGTYGYAAPEYVAT 277
+ GT Y APE + +
Sbjct: 179 MRTLCGTPTYLAPEVLVS 196
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKS----QKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGL + +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L + + N ++ + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYF 119
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHV 259
+ A + +LH E +I+RD K N+LL KI+DFG +K+ GE+ +
Sbjct: 120 YQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 171
Query: 260 TTRVMGTYGYAAPEYVAT 277
+ GT Y APE + +
Sbjct: 172 MRTLCGTPTYLAPEVLVS 189
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L + + N ++ + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYF 120
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHV 259
+ A + +LH E +I+RD K N+LL KI+DFG +K+ GE+ +
Sbjct: 121 YQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 260 TTRVMGTYGYAAPEYVAT 277
+ GT Y APE + +
Sbjct: 173 MRTLCGTPTYLAPEVLVS 190
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L + + N ++ + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYF 120
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHV 259
+ A + +LH E +I+RD K N+LL KI+DFG +K+ GE+ +
Sbjct: 121 YQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 260 TTRVMGTYGYAAPEYVAT 277
+ GT Y APE + +
Sbjct: 173 MRTLCGTPTYLAPEVLVS 190
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 80 SFLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGF 139
S L+L+ K + +G+G +G V + ++++T A + I+++NP+ +
Sbjct: 20 SLLELQ---KKYHLKGAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDV--- 72
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLF------------ 187
E ++EV + +L HPN+ +L +++ + LV E G L + L
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 188 ----------------RRNPSI----QPLSWDIRLKIAIGAAR----GLGFLHTSEKKVI 223
N SI + L + R K+ R L +LH + +
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN--QGIC 190
Query: 224 YRDFKASNILLDGN--YNAKISDFGLAK--LGPAGGESHVTTRVMGTYGYAAPEYVATGN 279
+RD K N L N + K+ DFGL+K GE + T GT + APE + T N
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
++E+ L +L+HP ++K+ + ++ ++ +V E M+ G L + + N ++ + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYF 120
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHV 259
+ A + +LH E +I+RD K N+LL KI+DFG +K+ GE+ +
Sbjct: 121 YQMLLAVQ---YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSL 172
Query: 260 TTRVMGTYGYAAPEYVAT 277
+ GT Y APE + +
Sbjct: 173 MRTLCGTPTYLAPEVLVS 190
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T+ ++ LG+G F V + K LA + M++ KKL+ Q E E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRC---VKVLAGQEYA-AMIINTKKLSARDHQKLER---EAR 62
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
L HPN+V+L E+ L+++ + G L E+ + R S S I+ +
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE- 121
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
LH + V++R+ K N+LL K++DFGLA GE
Sbjct: 122 ------AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGF 173
Query: 264 MGTYGYAAPE 273
GT GY +PE
Sbjct: 174 AGTPGYLSPE 183
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 45 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 146
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ V
Sbjct: 147 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA 204
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 205 TR-----WYRAPE 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 95 SLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
L+G+G FG+VY G W + + ++ I++ N + ++ F + EV +
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIR--------LIDIERDNEDQLKAF---KREVMAYRQTR 87
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
H N+V +G C L ++ + +L + + R+ I L + +IA +G+G
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVV--RDAKI-VLDVNKTRQIAQEIVKGMG 144
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPA--GGESHVTTRVM-GTYGYA 270
+LH K ++++D K+ N+ D N I+DFGL + G R+ G +
Sbjct: 145 YLHA--KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 271 APEYV 275
APE +
Sbjct: 202 APEII 206
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 95 SLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSH 154
LLGEG +G+V K +D +TL + + + P G + E+ L RL H
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLC-RRAVKILKKKKLRRIP---NGEANVKKEIQLLRRLRH 65
Query: 155 PNLVKLLG--YCWEDKELLLVYEYMQRGS---LENHLFRRNPSIQPLSWDIRLKIAIGAA 209
N+++L+ Y E +++ +V EY G L++ +R P Q + +L
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL------I 119
Query: 210 RGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK-LGPAGGESHVTTRVMGTYG 268
GL +LH+ + ++++D K N+LL KIS G+A+ L P + T G+
Sbjct: 120 DGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPA 176
Query: 269 YAAPEYVATG 278
+ PE +A G
Sbjct: 177 FQPPE-IANG 185
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES---MQGFEEWQSEVNFLGRLS 153
LG G FGRV L K G A+K L+ + ++ E +E L ++
Sbjct: 49 LGTGSFGRV--------MLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
P LVKL ++ L +V EY+ G + +HL R +P + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+LH+ + +IYRD K N+L+D +++DFG AK
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G F V + K LA + ++ KKL+ Q E E L HPN
Sbjct: 30 LGKGAFSVVRRCV---KVLAGQEYA-AKIINTKKLSARDHQKLER---EARICRLLKHPN 82
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFL 215
+V+L E+ L+++ + G L E+ + R S S I+ + L
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------AVL 135
Query: 216 HTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
H + V++RD K N+LL K++DFGLA GE GT GY +P
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSP 193
Query: 273 E 273
E
Sbjct: 194 E 194
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEY 97
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISA 151
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 21 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 122
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+ V
Sbjct: 123 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 180
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 181 TR-----WYRAPE 188
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 22/191 (11%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
K F +LG G F V+ L + G + A+K + ++E+
Sbjct: 9 KTFIFMEVLGSGAFSEVF--------LVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 149 LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
L ++ H N+V L LV + + G L + + R + D L I
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK---DASLVIQ-QV 115
Query: 209 ARGLGFLHTSEKKVIYRDFKASNIL-LDGNYNAK--ISDFGLAKLGPAGGESHVTTRVMG 265
+ +LH E +++RD K N+L L N+K I+DFGL+K+ G + + G
Sbjct: 116 LSAVKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACG 169
Query: 266 TYGYAAPEYVA 276
T GY APE +A
Sbjct: 170 TPGYVAPEVLA 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NIL+
Sbjct: 98 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANILISA 151
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEE 141
++++ ++ +P +G G +G V VD +T G VAIKKL P + F +
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAVCSA-VDGRT--------GAKVAIKKLYRPFQSELFAK 69
Query: 142 WQ-SEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEYM--QRGSLENHLFRRNPS 192
E+ L + H N++ LL D+ L LV +M G L H
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 193 IQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGP 252
IQ L + + +GL ++H + +I+RD K N+ ++ + KI DFGLA+
Sbjct: 130 IQFLVYQM--------LKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 253 AGGESHVTTRVMGTYGYAAPEYV 275
+ V TR Y APE +
Sbjct: 180 SEMXGXVVTR-----WYRAPEVI 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFE-EWQSEVNFLGRLSH 154
+G+G FG V+K G VA+KK+ E+ +GF E+ L L H
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 155 PNLVKLLGYCWEDKE--------LLLVYEYMQR---GSLENHLFRRNPSIQPLSWDIRLK 203
N+V L+ C + LV+++ + G L N L + S +I+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS------EIK-R 129
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK---LGPAGGESHVT 260
+ GL ++H + K+++RD KA+N+L+ + K++DFGLA+ L +
Sbjct: 130 VMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 261 TRVMGTYGYAAPE 273
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFE-EWQSEVNFLGRLSH 154
+G+G FG V+K G VA+KK+ E+ +GF E+ L L H
Sbjct: 25 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 155 PNLVKLLGYCWEDKE--------LLLVYEYMQR---GSLENHLFRRNPSIQPLSWDIRLK 203
N+V L+ C + LV+++ + G L N L + S +I+ +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS------EIK-R 128
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK---LGPAGGESHVT 260
+ GL ++H + K+++RD KA+N+L+ + K++DFGLA+ L +
Sbjct: 129 VMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 261 TRVMGTYGYAAPE 273
RV+ T Y PE
Sbjct: 187 NRVV-TLWYRPPE 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFE-EWQSEVNFLGRLSH 154
+G+G FG V+K G VA+KK+ E+ +GF E+ L L H
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 155 PNLVKLLGYCWEDKE--------LLLVYEYMQR---GSLENHLFRRNPSIQPLSWDIRLK 203
N+V L+ C + LV+++ + G L N L + S +I+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS------EIK-R 129
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK---LGPAGGESHVT 260
+ GL ++H + K+++RD KA+N+L+ + K++DFGLA+ L +
Sbjct: 130 VMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 261 TRVMGTYGYAAPE 273
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPES-MQGFE-EWQSEVNFLGRLSH 154
+G+G FG V+K G VA+KK+ E+ +GF E+ L L H
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 155 PNLVKLLGYCWEDKE--------LLLVYEYMQR---GSLENHLFRRNPSIQPLSWDIRLK 203
N+V L+ C + LV+++ + G L N L + S +I+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS------EIK-R 129
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK---LGPAGGESHVT 260
+ GL ++H + K+++RD KA+N+L+ + K++DFGLA+ L +
Sbjct: 130 VMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 261 TRVMGTYGYAAPE 273
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLS 153
L+G G +G VY + DK + VAIKK+N E + + E+ L RL
Sbjct: 33 LIGRGSYGYVYLAY--DKNTEKN-------VAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 154 HPNLVKLLGYCWEDK-----ELLLVYEYMQ---RGSLENHLFRRNPSIQPLSWDIRLKIA 205
+++L D EL +V E + + +F I+ + +++ L
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL--- 140
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
G F+H E +I+RD K +N LL+ + + K+ DFGLA+ + ++++
Sbjct: 141 -----GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI D GLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 41/197 (20%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 21 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFR----RNPSIQPL 196
L + H N++ LL E ++ LV M G+ N++ + + +Q L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFL 126
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGE 256
+ I RGL ++H+++ +I+RD K SN+ ++ + KI DFGLA+
Sbjct: 127 IYQI--------LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Query: 257 SHVTTRVMGTYGYAAPE 273
+V TR Y APE
Sbjct: 177 GYVATR-----WYRAPE 188
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI D GLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+GEG G V LA K G VA+K ++ Q E +EV + H N
Sbjct: 53 IGEGSTGIV--------CLAREKHS-GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
+V++ +EL ++ E++Q G+L + + + + + ++ + + L +LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH 158
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTR--VMGTYGYAAPEY 274
+ VI+RD K+ +ILL + K+SDFG A V R ++GT + APE
Sbjct: 159 A--QGVIHRDIKSDSILLTLDGRVKLSDFGFC----AQISKDVPKRKXLVGTPYWMAPEV 212
Query: 275 VA 276
++
Sbjct: 213 IS 214
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H + R P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI FGLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 114
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NI++
Sbjct: 115 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISA 168
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 90 NFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGL-GMVVAIKKLNPESMQGFEEWQSEVNF 148
+F+ ++LG+G FG+V K ++ L AIKK+ + + SEV
Sbjct: 7 DFEEIAVLGQGAFGQVVK----------ARNALDSRYYAIKKIR-HTEEKLSTILSEVXL 55
Query: 149 LGRLSHPNLVKLLGYCWEDKE-------------LLLVYEYMQRGSLENHLFRRNPSIQP 195
L L+H +V+ E + L + EY + +L + + N + Q
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 196 LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA------- 248
D ++ L ++H+ + +I+R+ K NI +D + N KI DFGLA
Sbjct: 116 ---DEYWRLFRQILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 249 ---KLGPAG--GESHVTTRVMGTYGYAAPEYV-ATGNF 280
KL G S T +GT Y A E + TG++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHY 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISA 151
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 24/186 (12%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
D LGEG F + + V K S + + K++ + Q E+ L
Sbjct: 16 DKPLGEGSFS-ICRKCVHKK----SNQAFAVKIISKRMEANT-------QKEITALKLCE 63
Query: 154 -HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
HPN+VKL + LV E + G L + ++ + + I K+ +
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS--- 120
Query: 213 GFLHTSEKKVIYRDFKASNILL---DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
H + V++RD K N+L + N KI DFG A+L P + T T Y
Sbjct: 121 ---HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHY 175
Query: 270 AAPEYV 275
AAPE +
Sbjct: 176 AAPELL 181
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISA 151
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 126 VAIKKLNPESMQG---FEEWQSEVNFLGRLSHPNLVKLLGYCWEDKEL------LLVYEY 176
VA+K L + + + ++ E L+HP +V + Y + E +V EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEY 97
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
+ +L + + P ++ +++ A + L F H + +I+RD K +NI++
Sbjct: 98 VDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISA 151
Query: 237 NYNAKISDFGLAK-LGPAGGESHVTTRVMGTYGYAAPE 273
K+ DFG+A+ + +G T V+GT Y +PE
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSH 154
+G G +G V + L VA+KKL+ +S+ E+ L L H
Sbjct: 28 VGSGAYGSVCSAY---------DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 78
Query: 155 PNLVKLL-----GYCWED-KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
N++ LL ED E+ LV M G+ N++ + Q LS + +
Sbjct: 79 ENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVK----CQALSDEHVQFLVYQL 132
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
RGL ++H++ +I+RD K SN+ ++ + +I DFGLA+ +V TR
Sbjct: 133 LRGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 269 YAAPE 273
Y APE
Sbjct: 186 YRAPE 190
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G+ VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI D GLA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG G +G V DK T + + I + S + EV L L HPN
Sbjct: 45 LGSGAYGEVL--LCRDKV-----THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
++KL + + + LV E + G L + + R + + +K + G+ +LH
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLS---GVTYLH 153
Query: 217 TSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
+ +++RD K N+LL+ KI DFGL+ + + + R +GT Y APE
Sbjct: 154 --KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKER-LGTAYYIAPE 208
Query: 274 YV 275
+
Sbjct: 209 VL 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+ N+ LG+G F V + TGL I S + F++ + E
Sbjct: 4 SDNYDVKEELGKGAFSVV-------RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 56
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
+L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 114
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
+ + H++ +++R+ K N+LL K++DFGLA +S
Sbjct: 115 ---ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGF 166
Query: 264 MGTYGYAAPE 273
GT GY +PE
Sbjct: 167 AGTPGYLSPE 176
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 164
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ +
Sbjct: 165 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX-ICSR 220
Query: 267 YGYAAPEYV 275
Y Y APE +
Sbjct: 221 Y-YRAPELI 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 194 QPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
+P++ + + + ARG+ FL S +K I+RD A NILL N KI DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 87 ATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP-ESMQGFEEWQSE 145
A + K LG G FG+V V K+ VA+K L + ++ +E
Sbjct: 25 ARERLKLGKSLGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTE 80
Query: 146 VNFLGRLSHP-NLVKLLGYCWEDK-ELLLVYEYMQRGSLENHL 186
+ L + H N+V LLG C + L+++ EY + G+L N+L
Sbjct: 81 LKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+ N+ LG+G F V + TGL I S + F++ + E
Sbjct: 5 SDNYDVKEELGKGAFSVV-------RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 57
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
+L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 115
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
+ + H++ +++R+ K N+LL K++DFGLA +S
Sbjct: 116 ---ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGF 167
Query: 264 MGTYGYAAPE 273
GT GY +PE
Sbjct: 168 AGTPGYLSPE 177
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSH 154
+G G +G V + L VA+KKL+ +S+ E+ L L H
Sbjct: 36 VGSGAYGSVCSAY---------DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 155 PNLVKLL-----GYCWED-KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
N++ LL ED E+ LV M G+ N++ + Q LS + +
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVK----CQALSDEHVQFLVYQL 140
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
RGL ++H++ +I+RD K SN+ ++ + +I DFGLA+ +V TR
Sbjct: 141 LRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 269 YAAPE 273
Y APE
Sbjct: 194 YRAPE 198
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+ N+ LG+G F V + TGL I S + F++ + E
Sbjct: 5 SDNYDVKEELGKGAFSVV-------RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 57
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
+L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 115
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
+ + H++ +++R+ K N+LL K++DFGLA +S
Sbjct: 116 ---ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGF 167
Query: 264 MGTYGYAAPE 273
GT GY +PE
Sbjct: 168 AGTPGYLSPE 177
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEV 146
+N P +G G +G V + D KT G VA+KKL+ +S+ + E+
Sbjct: 25 QNLSP---VGSGAYGSVCAAF-DTKT--------GHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 147 NFLGRLSHPNLVKLLGY------CWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
L + H N++ LL E ++ LV M G+ N++ + Q L+ D
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDH 126
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVT 260
+ RGL ++H+++ +I+RD K SN+ ++ + KI DF LA+ +V
Sbjct: 127 VQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA 184
Query: 261 TRVMGTYGYAAPE 273
TR Y APE
Sbjct: 185 TR-----WYRAPE 192
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T +++ LG+G F V + KT P++ ++ KKL+ Q E E
Sbjct: 30 TDDYQLFEELGKGAFSVVRR--CVKKT--PTQEYAAKIINTKKLSARDHQKLER---EAR 82
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
L HPN+V+L E+ LV++ + G L E+ + R S S I +
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE- 141
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
H + +++RD K N+LL K++DFGLA GE
Sbjct: 142 ------SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGF 193
Query: 264 MGTYGYAAPE 273
GT GY +PE
Sbjct: 194 AGTPGYLSPE 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 158
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 159 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 213
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 214 RYYRAPELI 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 149
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 150 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 204
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 205 RYYRAPELI 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
+ N+ LG+G F V + TGL I S + F++ + E
Sbjct: 28 SDNYDVKEELGKGAFSVV-------RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 80
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKIAI 206
+L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 138
Query: 207 GAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTTRV 263
+ + H++ +++R+ K N+LL K++DFGLA +S
Sbjct: 139 ---ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGF 190
Query: 264 MGTYGYAAPEYV 275
GT GY +PE +
Sbjct: 191 AGTPGYLSPEVL 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 41/207 (19%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKL-NPESMQGFEEW 142
++ K + +G+G +G V+ G W +K VA+K E F E
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEK------------VAVKVFFTTEEASWFRE- 79
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWED-------KELLLVYEYMQRGSLENHLFRRNPSIQP 195
+E+ + H N+ LG+ D +L L+ +Y + GSL ++L +
Sbjct: 80 -TEIYQTVLMRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKS 135
Query: 196 LSWDIRLKIAIGAARGLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLA- 248
+ LK+A + GL LHT + + +RD K+ NIL+ N I+D GLA
Sbjct: 136 M-----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
Query: 249 KLGPAGGESHV--TTRVMGTYGYAAPE 273
K E + TRV GT Y PE
Sbjct: 191 KFISDTNEVDIPPNTRV-GTKRYMPPE 216
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 142
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ +
Sbjct: 143 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX-ICSR 198
Query: 267 YGYAAPEYV 275
Y Y APE +
Sbjct: 199 Y-YRAPELI 206
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCW---EDKELL---LVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E K+++ LV +Y+ + H + R P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 45/213 (21%)
Query: 81 FLDLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFE 140
FL ++ + +G+G +G V++G + G VA+K + + +
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRG-----------SWQGENVAVKIFSSRDEKSWF 77
Query: 141 EWQSEVNFLGRLSHPNLVKLLGYCWED-------KELLLVYEYMQRGSLENHLFRRNPSI 193
++E+ L H N+ LG+ D +L L+ Y + GSL ++L +
Sbjct: 78 R-ETELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QL 128
Query: 194 QPLSWDIRLKIAIGAARGLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGL 247
L L+I + A GL LH + + +RD K+ NIL+ N I+D GL
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 248 AKLGPAGGESHVTTRV-------MGTYGYAAPE 273
A + S T ++ +GT Y APE
Sbjct: 189 AVM-----HSQSTNQLDVGNNPRVGTKRYMAPE 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 142
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ +
Sbjct: 143 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX-ICSR 198
Query: 267 YGYAAPEYV 275
Y Y APE +
Sbjct: 199 Y-YRAPELI 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 138
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 139 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 193
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 194 RYYRAPELI 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 164
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 165 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 219
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 220 RYYRAPELI 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSH 154
+G G +G V + L VA+KKL+ +S+ E+ L L H
Sbjct: 36 VGSGAYGSVCSAY---------DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 155 PNLVKLL-----GYCWED-KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
N++ LL ED E+ LV M G+ N++ + Q LS + +
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKS----QALSDEHVQFLVYQL 140
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG 268
RGL ++H++ +I+RD K SN+ ++ + +I DFGLA+ +V TR
Sbjct: 141 LRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 269 YAAPE 273
Y APE
Sbjct: 194 YRAPE 198
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 131
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 132 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 186
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 187 RYYRAPELI 195
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 166
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 167 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 221
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 222 RYYRAPELI 230
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 168
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 169 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 223
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 224 RYYRAPELI 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 209
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 210 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 264
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 265 RYYRAPELI 273
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 135
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 136 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 190
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 191 RYYRAPELI 199
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 97 LGEGGFGRVYKG-WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
L E G ++KG W G +VV + K+ S + ++ E L SHP
Sbjct: 18 LNENHSGELWKGRW----------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 156 NLVKLLGYCWEDK--ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
N++ +LG C L+ + GSL N L + S + K A+ ARG
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAV--KFALDXARGXA 125
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKIS 243
FLHT E + + ++ +D + A+IS
Sbjct: 126 FLHTLEPLIPRHALNSRSVXIDEDXTARIS 155
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 143
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 144 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 198
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 199 RYYRAPELI 207
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 134
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ +
Sbjct: 135 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX-ICSR 190
Query: 267 YGYAAPEYV 275
Y Y APE +
Sbjct: 191 Y-YRAPELI 198
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 62 EEASPNGQILETPDLKVFSFLDLKSATKNF--KPDSLLGEGGFGRVYKGWVDDKTLAPSK 119
+EA Q TP + S + +NF K D L GR G V+ PS
Sbjct: 17 KEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPS- 75
Query: 120 TGLGMVVAIKKLNPESMQGFEEWQSEVNF---LGRLSHPNLVKLLGYCWEDKELLLVYEY 176
G ++A+K++ ++ E+ + ++ + + P V G + + ++ + E
Sbjct: 76 ---GQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131
Query: 177 MQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
M SL+ + Q + DI KIA+ + L LH S+ VI+RD K SN+L++
Sbjct: 132 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINA 189
Query: 237 NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
K+ DFG++ +S T G Y APE +
Sbjct: 190 LGQVKMCDFGISGY---LVDSVAKTIDAGCKPYMAPERI 225
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G F +++KG + + V +K L+ E + + + +LSH +
Sbjct: 16 LGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV G C+ E +LV E+++ GSL+ +L ++N + + W +L++A A + FL
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAWAMHFL- 129
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAG 254
E +I+ + A NILL + K + KL G
Sbjct: 130 -EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYEYM-----------QRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E M +RG+L+ L R
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARS------F 119
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 120 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 165
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 166 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 195
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG VY+ + D G +VAIKK+ +Q E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 156 NLVKLLGYCWEDKE------LLLVYEYMQRG--SLENHLFRRNPSIQPLSWDIRLKIAIG 207
N+V+L + + E L LV +Y+ + H R ++ P+ + ++L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIY-VKLYM-YQ 130
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVMGT 266
R L ++H+ + +RD K N+LLD + K+ DFG AK GE +V+ + +
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICS 185
Query: 267 YGYAAPEYV 275
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSI-QPLSWDIRLK 203
E+ L R+ H N++K+L LV E G R+P + +PL+ I +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
+ +G+L K +I+RD K NI++ ++ K+ DFG A G +
Sbjct: 139 LV----SAVGYLRL--KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG---KLFYTF 189
Query: 264 MGTYGYAAPEYVATGNFY 281
GT Y APE V GN Y
Sbjct: 190 CGTIEYCAPE-VLMGNPY 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
LG+G F +++KG + + V +K L+ E + + + +LSH +
Sbjct: 16 LGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 157 LVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLH 216
LV G C E +LV E+++ GSL+ +L ++N + + W +L++A A + FL
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAAAMHFL- 129
Query: 217 TSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAG 254
E +I+ + A NILL + K + KL G
Sbjct: 130 -EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 43/221 (19%)
Query: 83 DLKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEW 142
D ++ ++ LLG+GGFG V+ G + + VAIK + + G+
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLGWSPL 75
Query: 143 QS------EVNFLGRL----SHPNLVKLLGYCWEDKELLLVYEY-MQRGSLENHLFRRNP 191
EV L ++ HP +++LL + + +LV E + L +++ + P
Sbjct: 76 SDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP 135
Query: 192 SIQPLSWDIRLKIAIGAARGL------GFLHTSEKKVIYRDFKASNILLDGNYN-AKISD 244
+ G +R H + V++RD K NIL+D AK+ D
Sbjct: 136 ------------LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLID 183
Query: 245 FGLAKLGPAGGESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
FG L T GT Y+ PE+++ ++ L A
Sbjct: 184 FGSGAL----LHDEPYTDFDGTRVYSPPEWISRHQYHALPA 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 45/209 (21%)
Query: 85 KSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS 144
++ ++ +G+G +G V++G + G VA+K + + + ++
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG-----------SWQGENVAVKIFSSRDEKSWFR-ET 51
Query: 145 EVNFLGRLSHPNLVKLLGYCWED-------KELLLVYEYMQRGSLENHLFRRNPSIQPLS 197
E+ L H N+ LG+ D +L L+ Y + GSL ++L + L
Sbjct: 52 ELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 103
Query: 198 WDIRLKIAIGAARGLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLG 251
L+I + A GL LH + + +RD K+ NIL+ N I+D GLA +
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM- 162
Query: 252 PAGGESHVTTRV-------MGTYGYAAPE 273
S T ++ +GT Y APE
Sbjct: 163 ----HSQSTNQLDVGNNPRVGTKRYMAPE 187
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 45/197 (22%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHPN 156
+G+G +G V++G + G VA+K + + + ++E+ L H N
Sbjct: 16 VGKGRYGEVWRG-----------SWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN 63
Query: 157 LVKLLGYCWED-------KELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAA 209
+ LG+ D +L L+ Y + GSL ++L + L L+I + A
Sbjct: 64 I---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIA 115
Query: 210 RGLGFLHTS------EKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRV 263
GL LH + + +RD K+ NIL+ N I+D GLA + S T ++
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQL 170
Query: 264 -------MGTYGYAAPE 273
+GT Y APE
Sbjct: 171 DVGNNPRVGTKRYMAPE 187
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 62/250 (24%)
Query: 90 NFKPDSLLGEGGFGRVY--KGWVDD------------KTLAPSKTGLGMVVAIKKL-NPE 134
+F+P +G GGFG V+ K VDD + LA K + V A+ KL +P
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV-MREVKALAKLEHPG 65
Query: 135 SMQGF--------EEWQSEVNFLG--------RLSHPNL-----VKL-----------LG 162
++ F E+WQ E++ + LS P+ VK+ +G
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 163 YCWEDKELLLVYEYMQRGSLEN--HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEK 220
+ +Y MQ EN R S++ + L I I A + FLH+ K
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS--K 183
Query: 221 KVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYG----------YA 270
+++RD K SNI + K+ DFGL E M Y Y
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYM 243
Query: 271 APEYVATGNF 280
+PE + N+
Sbjct: 244 SPEQIHGNNY 253
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
Query: 273 EYV 275
E +
Sbjct: 188 EVI 190
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APEVI 198
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
Query: 273 EYV 275
E +
Sbjct: 188 EVI 190
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
Query: 273 EYV 275
E +
Sbjct: 189 EVI 191
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
Query: 273 EYV 275
E +
Sbjct: 189 EVI 191
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 137 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 271 APEYV 275
APE +
Sbjct: 192 APEVI 196
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAA 271
+G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRA 193
Query: 272 PEYV 275
PE +
Sbjct: 194 PEVI 197
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAA 271
+G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRA 193
Query: 272 PEYV 275
PE +
Sbjct: 194 PEVI 197
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 271 APEYV 275
APE +
Sbjct: 194 APEVI 198
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAA 271
+G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRA 193
Query: 272 PEYV 275
PE +
Sbjct: 194 PEVI 197
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 271 APEYV 275
APE +
Sbjct: 187 APEVI 191
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 199
Query: 273 EYV 275
E +
Sbjct: 200 EVI 202
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
Query: 273 EYV 275
E +
Sbjct: 195 EVI 197
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 120 TGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYM 177
T LG+ VA+KKL+ ++ + E+ L ++H N++ LL K L E
Sbjct: 46 TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL----EEF 101
Query: 178 QRGSLENHLFRRN-PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
Q L L N + + D + G H +I+RD K SNI++
Sbjct: 102 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 237 NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE------YVATGNFYLLSAKFGNV 290
+ KI DFGLA+ + + T + T Y APE Y A + + + G +
Sbjct: 162 DCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 291 INVCM 295
+ C+
Sbjct: 219 VKGCV 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 271 APEYV 275
APE +
Sbjct: 231 APEVI 235
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
Query: 273 EYV 275
E +
Sbjct: 196 EVI 198
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 271 APEYV 275
APE +
Sbjct: 231 APEVI 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEV-----NFLGR 151
LGE G G + W + KTG V+A+K++ G +E + L
Sbjct: 30 LGEMGSGTCGQVW----KMRFRKTG--HVIAVKQMR---RSGNKEENKRILMDLDVVLKS 80
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
P +V+ G + ++ + E M G+ L +R P+ I K+ + +
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG--PIPERILGKMTVAIVKA 136
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA-KLGPAGGESHVTTRVMGTYGYA 270
L +L + VI+RD K SNILLD K+ DFG++ +L + R G Y
Sbjct: 137 LYYLK-EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL----VDDKAKDRSAGCAAYM 191
Query: 271 APEYV 275
APE +
Sbjct: 192 APERI 196
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAP 194
Query: 273 EYV 275
E +
Sbjct: 195 EVI 197
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 148
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 149 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 194
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 224
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 148
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 149 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 194
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 147
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 148 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 193
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 223
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 147
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 148 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 193
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 223
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 148
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 149 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 194
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 224
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 148
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 149 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 194
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 84 LKSATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
++ + +P LG G +G V K PS G ++A+K++ ++ E+ +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEK-----MRHVPS----GQIMAVKRIR-ATVNSQEQKR 51
Query: 144 SEVNF---LGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDI 200
++ + + P V G + + ++ + E M SL+ + Q + DI
Sbjct: 52 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDI 110
Query: 201 RLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
KIA+ + L LH S+ VI+RD K SN+L++ K+ DFG++
Sbjct: 111 LGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 147
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 148 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 193
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 223
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 147
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 148 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 193
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 115
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 116 FWQV-----LEAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 161
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 191
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 134
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 135 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 180
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 181 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 210
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 162
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 163 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 208
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 209 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 135
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 136 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 181
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 182 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS-H 154
LLGEG + +V +G V + G A+K + ++ EV L + +
Sbjct: 20 LLGEGAYAKV-QGAVSLQN--------GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 155 PNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGF 214
N+++L+ + +D LV+E +Q GS+ H+ ++ + + ++ A L F
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ----KHFNEREASRVVRDVAAALDF 126
Query: 215 LHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAK-LGPAGGESHVTTRVM----GT 266
LHT K + +RD K NIL + KI DF L + + +TT + G+
Sbjct: 127 LHT--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 267 YGYAAPEYV 275
Y APE V
Sbjct: 185 AEYMAPEVV 193
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 134
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 135 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 180
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 181 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 154
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 155 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 200
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 120
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 121 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 166
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 196
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 135
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 136 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 181
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 182 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 135
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 136 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 181
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 182 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 211
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 167
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 168 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 213
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 214 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 243
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 120
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 121 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 166
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 196
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 119
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 120 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 165
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 166 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 195
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 162
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 163 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 208
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 209 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 120
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 121 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 166
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 196
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 115
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 116 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 161
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 191
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 142
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 143 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 188
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 189 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 125 VVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+V + K E+ + E + L HP++V+LL D L +V+E+M L
Sbjct: 58 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 117
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA---K 241
+ +R + S + L + H + +I+RD K +LL N+ K
Sbjct: 118 EIVKRADAGFVYSEAVASHYMRQILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVK 175
Query: 242 ISDFGLA-KLGPAGGESHVTTRVMGTYGYAAPEYV 275
+ FG+A +LG +G V +GT + APE V
Sbjct: 176 LGGFGVAIQLGESG---LVAGGRVGTPHFMAPEVV 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
L HPN+V+ L +V EY G LF R + S D G
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISG 126
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + H + V +RD K N LLDG+ KI DFG +K + T +GT Y
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 181
Query: 270 AAPE 273
APE
Sbjct: 182 IAPE 185
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 115
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 116 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 161
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 191
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 49/210 (23%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQS------EVNFL 149
LLG GGFG VY G + + VAIK + + + + E + EV L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 150 GRLSH--PNLVKLLGYCWEDKELLLVYE-----------YMQRGSLENHLFRRNPSIQPL 196
++S +++LL + +L+ E +RG+L+ L R
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------F 118
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGG 255
W + + A R H V++RD K NIL+D N K+ DFG L
Sbjct: 119 FWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----L 164
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSA 285
+ V T GT Y+ PE++ ++ SA
Sbjct: 165 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 194
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 125 VVAIKKLNPESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLEN 184
+V + K E+ + E + L HP++V+LL D L +V+E+M L
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 185 HLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA---K 241
+ +R + S + L + H + +I+RD K +LL N+ K
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVK 173
Query: 242 ISDFGLA-KLGPAGGESHVTTRVMGTYGYAAPEYV 275
+ FG+A +LG +G V +GT + APE V
Sbjct: 174 LGGFGVAIQLGESG---LVAGGRVGTPHFMAPEVV 205
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
L HPN+V+ L +V EY G LF R + S D G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + H + V +RD K N LLDG+ KI DFG +K + T +GT Y
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 182
Query: 270 AAPE 273
APE
Sbjct: 183 IAPE 186
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGF-EEWQSEV 146
K + + +G G +G V +D ++ G VAIKKL+ P + F + E+
Sbjct: 24 KTYVSPTHVGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRPFQSEIFAKRAYREL 74
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYE-YMQRGSLENHLFR------RNPSIQPLSWD 199
L + H N++ LL L Y+ Y+ ++ L + IQ L +
Sbjct: 75 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQ 134
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHV 259
+ +GL ++H++ V++RD K N+ ++ + KI DFGLA+ A +V
Sbjct: 135 M--------LKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV 184
Query: 260 TTRVMGTYGYAAPEYVATGNFY 281
TR Y APE + + Y
Sbjct: 185 VTR-----WYRAPEVILSWMHY 201
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLN-PESMQGF-EEWQSEV 146
K + + +G G +G V +D ++ G VAIKKL+ P + F + E+
Sbjct: 42 KTYVSPTHVGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRPFQSEIFAKRAYREL 92
Query: 147 NFLGRLSHPNLVKLLGYCWEDKELLLVYE-YMQRGSLENHLFR------RNPSIQPLSWD 199
L + H N++ LL L Y+ Y+ ++ L + IQ L +
Sbjct: 93 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQ 152
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHV 259
+ +GL ++H++ V++RD K N+ ++ + KI DFGLA+ A +V
Sbjct: 153 M--------LKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV 202
Query: 260 TTRVMGTYGYAAPEYVATGNFY 281
TR Y APE + + Y
Sbjct: 203 VTR-----WYRAPEVILSWMHY 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 120 TGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYM 177
T LG+ VA+KKL+ ++ + E+ L ++H N++ LL K L E
Sbjct: 44 TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL----EEF 99
Query: 178 QRGSLENHLFRRN-PSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG 236
Q L L N + + D + G H +I+RD K SNI++
Sbjct: 100 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 159
Query: 237 NYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYV 275
+ KI DFGLA+ + + T + T Y APE +
Sbjct: 160 DCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVI 195
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 140 EEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
E Q E+ L HPN+V+ L ++ EY G L+ R + S D
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG----ELYERICNAGRFSED 116
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGES 257
G+ + H+ ++ +RD K N LLDG+ KI DFG +K +
Sbjct: 117 EARFFFQQLLSGVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174
Query: 258 HVTTRVMGTYGYAAPE 273
T +GT Y APE
Sbjct: 175 KST---VGTPAYIAPE 187
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 17 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ + +V M+ G+++ N ++ SI P W+ R
Sbjct: 67 HSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 120
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 121 VHTIH--QHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 271 APEYV 275
PE +
Sbjct: 177 PPEAI 181
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAP 272
G H +I+RD K SNI++ + KI DFGLA+ G S + + T Y AP
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAP 196
Query: 273 EYV 275
E +
Sbjct: 197 EVI 199
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 36 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 86 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 139
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 140 VHTIH--QHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 271 APEYV 275
PE +
Sbjct: 196 PPEAI 200
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 114 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 167
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 271 APEYV 275
PE +
Sbjct: 224 PPEAI 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 20 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 69
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 70 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 123
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 124 VHTIH--QHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 271 APEYV 275
PE +
Sbjct: 180 PPEAI 184
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 114 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 167
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 271 APEYV 275
PE +
Sbjct: 224 PPEAI 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 16 IGSGGSSKVFQVLNEKKQ----------IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 65
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 66 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 119
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +GT Y
Sbjct: 120 VHTIH--QHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 271 APEYV 275
PE +
Sbjct: 176 PPEAI 180
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNP--ESMQGFEEWQSEVNFLGRLS 153
L+G G +G V + + DK VVAIKK+ E + + E+ L RL+
Sbjct: 60 LIGTGSYGHVCEAY--DKLEK-------RVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 154 HPNLVKLLGYCWEDK-----ELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGA 208
H ++VK+L EL +V E S LFR + L L
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLL---YNL 165
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLG--PAGGESHV 259
G+ ++H++ +++RD K +N L++ + + K+ DFGLA+ P G S +
Sbjct: 166 LVGVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 20/192 (10%)
Query: 86 SATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSE 145
S T ++ +G+G F V + L ++ KKL+ Q E E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRC----VKLCTGHEYAAKIINTKKLSARDHQKLER---E 53
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKI 204
L H N+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 54 ARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL 113
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTT 261
LH + V++RD K N+LL K++DFGLA G+
Sbjct: 114 E-------AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWF 164
Query: 262 RVMGTYGYAAPE 273
GT GY +PE
Sbjct: 165 GFAGTPGYLSPE 176
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 84 LKSATKNF--KPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPE-SMQGFE 140
+ A +NF K D L GR G V+ PS G + A+K++ + Q +
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPS----GQIXAVKRIRATVNSQEQK 77
Query: 141 EWQSEVNFLGR-LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWD 199
+++ R + P V G + + ++ + E + SL+ + Q + D
Sbjct: 78 RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPED 136
Query: 200 IRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLA 248
I KIA+ + L LH S+ VI+RD K SN+L++ K DFG++
Sbjct: 137 ILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 211 GLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
G+ LH++ +I+RD K SNI++ + KI DFGLA+ G S + + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYR 192
Query: 271 APEYV 275
APE +
Sbjct: 193 APEVI 197
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
L HPN+V+ L +V EY G L F R + S D G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + H + V +RD K N LLDG+ KI+DFG +K + +GT Y
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAY 182
Query: 270 AAPE 273
APE
Sbjct: 183 IAPE 186
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 91 FKPDSLLGEGGFGRVYKG-------WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
++ DSL+G+G FG+V K WV K + K L ++ ++ +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHD 111
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
+E+ + +V L + L LV+E + S + RN + + +S ++ K
Sbjct: 112 TEMKYY-------IVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA--KISDFG 246
A L FL T E +I+ D K NILL + KI DFG
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 91 FKPDSLLGEGGFGRVYKG-------WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
++ DSL+G+G FG+V K WV K + K L ++ ++ +
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHD 92
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
+E+ + +V L + L LV+E + S + RN + + +S ++ K
Sbjct: 93 TEMKYY-------IVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 142
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA--KISDFG 246
A L FL T E +I+ D K NILL + KI DFG
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Query: 91 FKPDSLLGEGGFGRVYKG-------WVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQ 143
++ DSL+G+G FG+V K WV K + K L ++ ++ +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHD 111
Query: 144 SEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
+E+ + +V L + L LV+E + S + RN + + +S ++ K
Sbjct: 112 TEMKYY-------IVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNILL--DGNYNAKISDFG 246
A L FL T E +I+ D K NILL KI DFG
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKE-----LLLVYEYMQRGSLENHLFRRNPSIQP---- 195
E+ L HPN++ L +E L LV E M R L + + I P
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137
Query: 196 -LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAG 254
+ I L GL LH E V++RD NILL N + I DF LA+ A
Sbjct: 138 YFMYHILL--------GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 255 GESHVTTRVMGTYGYAAPEYV 275
T + Y APE V
Sbjct: 188 ANK---THYVTHRWYRAPELV 205
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 28/143 (19%)
Query: 145 EVNFLGRLSHPNLVKLLGYCWEDKE-----LLLVYEYMQRGSLENHLFRRNPSIQP---- 195
E+ L HPN++ L +E L LV E M R L + + I P
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137
Query: 196 -LSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK--LGP 252
+ I L GL LH E V++RD NILL N + I DF LA+
Sbjct: 138 YFMYHILL--------GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 253 AGGESHVTTRVMGTYGYAAPEYV 275
A +VT R Y APE V
Sbjct: 188 ANKTHYVTHR-----WYRAPELV 205
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 154 HPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR---LKIAIGA 208
HPN+++ YC E D+ L + E + +L++ + +N S + L + +
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 209 ARGLGFLHTSEKKVIYRDFKASNILLDG-------------NYNAKISDFGLAKLGPAGG 255
A G+ LH+ K+I+RD K NIL+ N ISDFGL K +G
Sbjct: 125 ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 256 ESHVT--TRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
S T GT G+ APE + N + I++
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
++ +G G +G V +A K G + A KK+ ++ + ++ E+ + L
Sbjct: 14 ENTIGRGSWGEV--------KIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+++L ++ ++ LV E G LF R + +I +
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 214 FLHTSEKKVIYRDFKASNILL---DGNYNAKISDFGL-AKLGP-------AGGESHVTTR 262
+ H + V +RD K N L + K+ DFGL A+ P G +V+ +
Sbjct: 121 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 263 VM-GTYGYAAPEYVATGNFYLL 283
V+ G YG E+ A Y+L
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVL 200
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 94 DSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLS 153
++ +G G +G V +A K G + A KK+ ++ + ++ E+ + L
Sbjct: 31 ENTIGRGSWGEV--------KIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 154 HPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLG 213
HPN+++L ++ ++ LV E G LF R + +I +
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 214 FLHTSEKKVIYRDFKASNILL---DGNYNAKISDFGL-AKLGP-------AGGESHVTTR 262
+ H + V +RD K N L + K+ DFGL A+ P G +V+ +
Sbjct: 138 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 263 VM-GTYGYAAPEYVATGNFYLL 283
V+ G YG E+ A Y+L
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVL 217
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 36 IGSGGSSKVFQVLNEKKQ----------IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 86 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 139
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A V +GT Y
Sbjct: 140 VHTIH--QHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 271 APEYV 275
PE +
Sbjct: 196 PPEAI 200
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 97 LGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESM--QGFEEWQSEVNFLGRLSH 154
+G GG +V++ + K + AIK +N E Q + +++E+ +L +L
Sbjct: 64 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 155 --PNLVKLLGYCWEDKELLLVYEYMQRGSLE-NHLFRRNPSIQPLSWDIRLKIAIGAARG 211
+++L Y D+ +Y M+ G+++ N ++ SI P W+ R
Sbjct: 114 HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEA 167
Query: 212 LGFLHTSEKKVIYRDFKASNILL-DGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
+ +H + +++ D K +N L+ DG K+ DFG+A S V +G Y
Sbjct: 168 VHTIH--QHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 271 APEYV 275
PE +
Sbjct: 224 PPEAI 228
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 172 LVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASN 231
LV+E M+ GS+ +H+ +R L + + A L FLH K + +RD K N
Sbjct: 88 LVFEKMRGGSILSHIHKRR-HFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPEN 141
Query: 232 ILLDGNYN---AKISDFGLAK-LGPAGGESHVTTRVM----GTYGYAAPEYV 275
IL + KI DFGL + G S ++T + G+ Y APE V
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 20/192 (10%)
Query: 86 SATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSE 145
S T ++ LG+G F V + + + ++ KKL+ Q E E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCM----KIPTGQEYAAKIINTKKLSARDHQKLER---E 53
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKI 204
L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL 113
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTT 261
H +++RD K N+LL K++DFGLA G+
Sbjct: 114 E-------SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWF 164
Query: 262 RVMGTYGYAAPE 273
GT GY +PE
Sbjct: 165 GFAGTPGYLSPE 176
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 145 EVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLSWDIRL 202
E+ L R HPN++ L + K + LV E M+ G L + + R+ S + S+ +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH- 128
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNIL-LDGNYNA---KISDFGLAK 249
IG + + +LH+ + V++RD K SNIL +D + N +I DFG AK
Sbjct: 129 --TIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
L HPN+V+ L +V EY G LF R + S D G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + H + V +RD K N LLDG+ KI FG +K + T +GT Y
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAY 182
Query: 270 AAPE 273
APE
Sbjct: 183 IAPE 186
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 20/194 (10%)
Query: 86 SATKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSE 145
S T ++ LG+G F V + + + ++ KKL+ Q E E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCM----KIPTGQEYAAKIINTKKLSARDHQKLER---E 53
Query: 146 VNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSL-ENHLFRRNPSIQPLSWDIRLKI 204
L HPN+V+L E+ LV++ + G L E+ + R S S I+ +
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL 113
Query: 205 AIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYN---AKISDFGLAKLGPAGGESHVTT 261
H +++RD K N+LL K++DFGLA G+
Sbjct: 114 E-------SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWF 164
Query: 262 RVMGTYGYAAPEYV 275
GT GY +PE +
Sbjct: 165 GFAGTPGYLSPEVL 178
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 145 EVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRN-PSIQPLSWDIRL 202
E+ L R HPN++ L + K + LV E M+ G L + + R+ S + S+ +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH- 128
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNIL-LDGNYNA---KISDFGLAK 249
IG + + +LH+ + V++RD K SNIL +D + N +I DFG AK
Sbjct: 129 --TIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 152 LSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARG 211
L HPN+V+ L +V EY G LF R + S D G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISG 127
Query: 212 LGFLHTSEKKVIYRDFKASNILLDGN--YNAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+ + H + V +RD K N LLDG+ KI FG +K + T +GT Y
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAY 182
Query: 270 AAPE 273
APE
Sbjct: 183 IAPE 186
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAK 249
A+G+ FL + +K I+RD A NILL KI DFGLA+
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 153 SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGL 212
S P ++ L E++L+ EY G + + + + IRL I G+
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI--LEGV 144
Query: 213 GFLHTSEKKVIYRDFKASNILLDGNY---NAKISDFGLAKLGPAGGESHVTTRVMGTYGY 269
+LH + +++ D K NILL Y + KI DFG+++ G + +MGT Y
Sbjct: 145 YYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEY 199
Query: 270 AAPE 273
APE
Sbjct: 200 LAPE 203
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 143 QSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRL 202
Q E GRL P++V + + D +L + + L L R+ P P + I
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVR 141
Query: 203 KIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTT- 261
+I G +RD K NIL+ + A + DFG+A A + +T
Sbjct: 142 QI------GSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIAS---ATTDEKLTQL 192
Query: 262 -RVMGTYGYAAPE 273
+GT Y APE
Sbjct: 193 GNTVGTLYYXAPE 205
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 145 EVNFLGRLSHPNLVKL--LGYCWEDKELLLVYEYMQRGSLENHLFRR----NPSIQPLSW 198
E+ L L HPN++ L + D+++ L+++Y + F R N L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 199 DIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDG----NYNAKISDFGLAKL--GP 252
+ + G+ +LH + V++RD K +NIL+ G KI+D G A+L P
Sbjct: 128 GMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 253 AGGESHVTTRVMGTYGYAAPEYVATGNFY 281
+ + V+ T+ Y APE + Y
Sbjct: 186 LKPLADLDP-VVVTFWYRAPELLLGARHY 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 96 LLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNFLGRLSHP 155
++G G FG V++ + + VAIKK+ +Q E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 156 NLVKLLGYCWE--DKE----LLLVYEYMQ----RGSLENHLFRRNPSIQPLSWDIRLKIA 205
N+V L + + DK+ L LV EY+ R S H + ++ L + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS--RHYAKLKQTMPMLLIKLYMYQL 150
Query: 206 IGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGGESHVTTRVM 264
+ R L ++H+ + +RD K N+LLD K+ DFG AK+ A GE +V+ +
Sbjct: 151 L---RSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-GEPNVSX-IC 203
Query: 265 GTYGYAAPEYV 275
Y Y APE +
Sbjct: 204 SRY-YRAPELI 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 145 EVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
E+ L R HPN++ L + K + +V E M+ G L + + R+ + + +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNIL-LDGNYNA---KISDFGLAK---------L 250
I + + +LH + V++RD K SNIL +D + N +I DFG AK +
Sbjct: 125 I----TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 251 GPAGGESHVTTRVMGTYGYAA 271
P + V V+ GY A
Sbjct: 179 TPCYTANFVAPEVLERQGYDA 199
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 166 EDKELLLVYEYMQRGSLENHLFR---RNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKV 222
+D L LV +Y G L L + R P + + IAI + L ++H
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH------ 198
Query: 223 IYRDFKASNILLDGNYNAKISDFG-LAKLGPAGGESHVTTRVMGTYGYAAPE 273
RD K NIL+D N + +++DFG KL G ++ +GT Y +PE
Sbjct: 199 --RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ--SSVAVGTPDYISPE 246
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 49/218 (22%)
Query: 89 KNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVNF 148
++F+ S LG G +G V+K + G + A+K+ SM F +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKED---------GRLYAVKR----SMSPFRGPKDRARK 103
Query: 149 LGRL-------SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
L + HP V+L WE+ +L + + SL+ H +W
Sbjct: 104 LAEVGSHEKVGQHPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCE---------AWGAS 153
Query: 202 LKIAI--GAARG--LGFLHTSEKKVIYRDFKASNILLDGNYNAKISDFG-LAKLGPAG-G 255
L A G R L H + +++ D K +NI L K+ DFG L +LG AG G
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
E G Y APE LL +G +V
Sbjct: 214 EVQ-----EGDPRYMAPE--------LLQGSYGTAADV 238
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 172 LVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASN 231
LV+E M+ GS+ +H+ +R L + + A L FLH K + +RD K N
Sbjct: 88 LVFEKMRGGSILSHIHKRR-HFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPEN 141
Query: 232 ILLDGNYN---AKISDFGLAK-LGPAGGESHVTTRVM----GTYGYAAPEYV 275
IL + KI DF L + G S ++T + G+ Y APE V
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 158 VKLLGYCWEDKELL-LVYEYMQRGSLENHLFR---RNPSIQPLSWDIRLKIAIGAARGLG 213
+ L + ++D+ L LV EY G L L + R P+ + + +AI + LG
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPE 273
++H RD K NILLD + +++DFG A G V GT Y +PE
Sbjct: 183 YVH--------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPE 233
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR---LKIAIG 207
HPN+++ YC E D+ L + E + +L++ + +N S + L + +
Sbjct: 67 DHPNVIRY--YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDG-------------NYNAKISDFGLAKLGPAG 254
A G+ LH+ K+I+RD K NIL+ N ISDFGL K +G
Sbjct: 124 IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 255 GESHVT--TRVMGTYGYAAPEYVATGNFYLLSAKFGNVINV 293
GT G+ APE + N + I++
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 145 EVNFLGRL-SHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLK 203
E+ L R HPN++ L + K + +V E + G L + + R+ + + +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
Query: 204 IAIGAARGLGFLHTSEKKVIYRDFKASNIL-LDGNYNA---KISDFGLAK 249
I + + +LH + V++RD K SNIL +D + N +I DFG AK
Sbjct: 125 I----TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR---LKIAIG 207
HPN+++ YC E D+ L + E + +L++ + +N S + L + +
Sbjct: 85 DHPNVIRY--YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDG-------------NYNAKISDFGLAKLGPAG 254
A G+ LH+ K+I+RD K NIL+ N ISDFGL K +G
Sbjct: 142 IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 255 GESHVT--TRVMGTYGYAAPEYV 275
GT G+ APE +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELL 222
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 216 HTSEKKVIYRDFKASNILLDGNY-NAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEY 274
H V++RD K NIL+D N K+ DFG L + V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 227
Query: 275 VATGNFYLLSA 285
+ ++ SA
Sbjct: 228 IRYHRYHGRSA 238
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 153 SHPNLVKLLGYCWE--DKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR---LKIAIG 207
HPN+++ YC E D+ L + E + +L++ + +N S + L + +
Sbjct: 85 DHPNVIRY--YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 208 AARGLGFLHTSEKKVIYRDFKASNILLDG-------------NYNAKISDFGLAKLGPAG 254
A G+ LH+ K+I+RD K NIL+ N ISDFGL K +G
Sbjct: 142 IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 255 GESHVT--TRVMGTYGYAAPEYV 275
GT G+ APE +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELL 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 158 VKLLGYCWEDK-ELLLVYEYMQRGSLENHLFR---RNPSIQPLSWDIRLKIAIGAARGLG 213
+ L Y ++D+ L LV +Y G L L + + P + + +AI + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFG-LAKLGPAGGESHVTTRVMGTYGYAAP 272
++H RD K N+LLD N + +++DFG K+ G ++ +GT Y +P
Sbjct: 212 YVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ--SSVAVGTPDYISP 261
Query: 273 E 273
E
Sbjct: 262 E 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 158 VKLLGYCWEDK-ELLLVYEYMQRGSLENHLFR---RNPSIQPLSWDIRLKIAIGAARGLG 213
+ L Y ++D+ L LV +Y G L L + + P + + +AI + L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 214 FLHTSEKKVIYRDFKASNILLDGNYNAKISDFG-LAKLGPAGGESHVTTRVMGTYGYAAP 272
++H RD K N+LLD N + +++DFG K+ G ++ +GT Y +P
Sbjct: 196 YVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ--SSVAVGTPDYISP 245
Query: 273 E 273
E
Sbjct: 246 E 246
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T F +G G FG V+K K G + AIK+ + + + G + Q+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 59
Query: 148 ------FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
LG+ SH +V+ ED +L+ EY GSL + + N I +
Sbjct: 60 EVYAHAVLGQHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAE 116
Query: 202 LK-IAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
LK + + RGL ++H+ +++ D K SNI +
Sbjct: 117 LKDLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T F +G G FG V+K K G + AIK+ + + + G + Q+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 57
Query: 148 ------FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
LG+ SH +V+ ED +L+ EY GSL + + N I +
Sbjct: 58 EVYAHAVLGQHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAE 114
Query: 202 LK-IAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
LK + + RGL ++H+ +++ D K SNI +
Sbjct: 115 LKDLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T F +G G FG V+K K G + AIK+ + + + G + Q+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 57
Query: 148 ------FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
LG+ SH +V+ ED +L+ EY GSL + + N I +
Sbjct: 58 EVYAHAVLGQHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAE 114
Query: 202 LK-IAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
LK + + RGL ++H+ +++ D K SNI +
Sbjct: 115 LKDLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 88 TKNFKPDSLLGEGGFGRVYKGWVDDKTLAPSKTGLGMVVAIKKLNPESMQGFEEWQSEVN 147
T F +G G FG V+K K G + AIK+ + + + G + Q+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 55
Query: 148 ------FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIR 201
LG+ SH +V+ ED +L+ EY GSL + + N I +
Sbjct: 56 EVYAHAVLGQHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAE 112
Query: 202 LK-IAIGAARGLGFLHTSEKKVIYRDFKASNILL 234
LK + + RGL ++H+ +++ D K SNI +
Sbjct: 113 LKDLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 144
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 95 SLLGEGG----FGRVYKGWVDDKTLAPSK-TGLGMVVAIKKLNPE--SMQGFEEWQSEVN 147
S L EGG + KG+ D T+ ++ G V ++++N E S + Q E++
Sbjct: 3 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 62
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI- 206
+HPN+V D EL +V +M GS ++ + D ++AI
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH-------FMDGMNELAIA 115
Query: 207 ----GAARGLGFLHTSEKKVIYRDFKASNILL 234
G + L ++H ++R KAS+IL+
Sbjct: 116 YILQGVLKALDYIH--HMGYVHRSVKASHILI 145
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 95 SLLGEGG----FGRVYKGWVDDKTLAPSK-TGLGMVVAIKKLNPE--SMQGFEEWQSEVN 147
S L EGG + KG+ D T+ ++ G V ++++N E S + Q E++
Sbjct: 19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 78
Query: 148 FLGRLSHPNLVKLLGYCWEDKELLLVYEYMQRGSLENHLFRRNPSIQPLSWDIRLKIAI- 206
+HPN+V D EL +V +M GS ++ + D ++AI
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH-------FMDGMNELAIA 131
Query: 207 ----GAARGLGFLHTSEKKVIYRDFKASNILL 234
G + L ++H ++R KAS+IL+
Sbjct: 132 YILQGVLKALDYIH--HMGYVHRSVKASHILI 161
>pdb|3DPG|A Chain A, Sgrai With Noncognate Dna Bound
pdb|3DPG|B Chain B, Sgrai With Noncognate Dna Bound
pdb|3DVO|A Chain A, Sgrai With Cognate Dna And Calcium Bound
pdb|3DVO|B Chain B, Sgrai With Cognate Dna And Calcium Bound
pdb|3DVO|C Chain C, Sgrai With Cognate Dna And Calcium Bound
pdb|3DVO|D Chain D, Sgrai With Cognate Dna And Calcium Bound
pdb|3DW9|A Chain A, Sgrai With Cognate Dna And Manganese Bound
pdb|3DW9|B Chain B, Sgrai With Cognate Dna And Manganese Bound
pdb|3MQ6|A Chain A, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|B Chain B, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|C Chain C, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|D Chain D, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|E Chain E, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|F Chain F, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|G Chain G, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQ6|H Chain H, Domain Swapped Sgrai With Dna And Calcium Bound
pdb|3MQY|A Chain A, Sgrai With Cleaved Dna And Magnesium Bound
pdb|3MQY|B Chain B, Sgrai With Cleaved Dna And Magnesium Bound
pdb|3N78|A Chain A, Sgrai Bound To Secondary Site Dna And Mg(Ii)
pdb|3N78|B Chain B, Sgrai Bound To Secondary Site Dna And Mg(Ii)
pdb|3N7B|A Chain A, Sgrai Bound To Secondary Site Dna And Ca(Ii)
pdb|3N7B|B Chain B, Sgrai Bound To Secondary Site Dna And Ca(Ii)
Length = 338
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 42/159 (26%)
Query: 119 KTGLGMVVAIKKLN----PESMQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVY 174
K GLG+ + L PE Q E W+ E+ L+ PN + L G Y
Sbjct: 176 KDGLGLPTSTPDLAVVVLPEEFQNDEMWREEI---AGLTRPNQILLSG----------AY 222
Query: 175 EYMQRGSLENHLFRRNPSIQPLSWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNI-- 232
+ +Q +QP +I L +A F + +Y+ +N+
Sbjct: 223 QRLQG------------RVQP--GEISLAVA--------FKRSLRSDRLYQPLYEANVMQ 260
Query: 233 -LLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYA 270
LL+G A +F + L P G + VT YG A
Sbjct: 261 LLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLA 299
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 197 SWDIRLKIAIGAARGLGFLHTSEKKVIYRDFKASNILLDGNYNA-KISDFGLAKLGPAGG 255
+DIR + + L + H+ K +++RD K N+++D ++ D+GLA+
Sbjct: 131 DFDIRFYM-YELLKALDYCHS--KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ 187
Query: 256 ESHVTTRVMGTYGYAAPEYVATGNFY 281
E +V RV Y + PE + Y
Sbjct: 188 EYNV--RVASRY-FKGPELLVDYQMY 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,753,060
Number of Sequences: 62578
Number of extensions: 370198
Number of successful extensions: 2659
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 810
Number of HSP's gapped (non-prelim): 1017
length of query: 297
length of database: 14,973,337
effective HSP length: 98
effective length of query: 199
effective length of database: 8,840,693
effective search space: 1759297907
effective search space used: 1759297907
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)