BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022414
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKEV 286
T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKEV 286
T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKEV 286
T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/253 (68%), Positives = 209/253 (82%), Gaps = 1/253 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKEV 286
T+LE A+ +K +
Sbjct: 329 HTILEFAQLIKNL 341
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/288 (61%), Positives = 219/288 (76%), Gaps = 10/288 (3%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKN 58
+ ++I N + K PP KF + RIL+TGGAGF+GSHL DKLM + +
Sbjct: 63 LREKIQNLERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLM-MDGH 114
Query: 59 EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+
Sbjct: 115 EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI 174
Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDE
Sbjct: 175 KTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDE 234
Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
GKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GE LTV G
Sbjct: 235 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSG 294
Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEV 286
QTR+F YVSD+V+GL+ LM + P+N+GNP E ++++ A +K++
Sbjct: 295 EQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQL 342
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/253 (67%), Positives = 208/253 (82%), Gaps = 1/253 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 88 RILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GE LTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 267 NDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEE 326
Query: 274 FTMLELAENVKEV 286
T+LE A+ +K +
Sbjct: 327 HTILEFAQLIKSL 339
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 141/264 (53%), Gaps = 22/264 (8%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
ILVTGGAGFIGSH+VDKL+EN +VI++DN TG+K+N+ +P+ E + D+ +
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55
Query: 95 LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 146
L E V+ + H A + NPV NV+GT+N+L + ++ + + +S
Sbjct: 56 LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115
Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
VYG+P P DE++ PI S Y K V E + Y+R +GIE I R N
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 207 YGPRMN-IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
YG R + + V+S FI + ++ + + G QTR F YV D+ + + +N
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNE-I 229
Query: 266 INIGNPGEFTMLELAENVK-EVNF 288
+NIG E ++ EL + +K E+ F
Sbjct: 230 VNIGTGKETSVNELFDIIKHEIGF 253
>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp.
(strain 638) GN=arnA PE=3 SV=1
Length = 660
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 25/268 (9%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ EV +D GS D + ++IG+ RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNFEVYGLD---IGS-DAISRFIGNSRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG V +D S V PI R Y K++ + +++ Y + G+ + R F
Sbjct: 433 SEVYGMCSDKVFDEDHSNL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF 491
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++
Sbjct: 492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDISDGIEALFRII 551
Query: 259 EGENTGP----INIGNP-GEFTMLELAE 281
E +N+ INIGNP E ++ ELAE
Sbjct: 552 ENKNSNCDGQIINIGNPDNEASIKELAE 579
>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=arnA PE=3 SV=1
Length = 673
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 432 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 490
Query: 197 EIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN GPR++ D R ++ I + G P+ + G Q R F + D
Sbjct: 491 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 550
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E N INIGNP E ++ EL E
Sbjct: 551 IEALFRVIENRNGQCDGQIINIGNPHNEASIRELGE 586
>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3
SV=1
Length = 672
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 431 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 489
Query: 197 EIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN GPR++ D R ++ I + G P+ + G Q R F + D
Sbjct: 490 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 549
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E N INIGNP E ++ EL +
Sbjct: 550 IEALFRIIENRNGQCDGQIINIGNPHNEASIRELGD 585
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 25/272 (9%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ +++ ++ +D GS D + +++G+PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +D S V PI R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPF 491
Query: 205 NTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR+ N+D R+ ++ I + G P+ + G Q R F ++D ++ L R++
Sbjct: 492 NWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKRCFTDINDGIEALFRII 551
Query: 259 EGEN---TGPI-NIGNP-GEFTMLELAENVKE 285
E + G I NIGNP E ++ ELAE + E
Sbjct: 552 ENRDGLCDGQIVNIGNPTNEASIRELAEMLLE 583
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
M+ILVTGGAGFIGSH V L+ + +V VVD + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 86 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
G R L ST EVYG D W +P+ S Y K ++ L YH+ HG+++
Sbjct: 121 G-RFLHVSTDEVYGS-----IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
+ R N YGPR + +++ F+ + + G + V G R + +VSD GL +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232
Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKEV 286
G + +IG E T LEL E + E
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEA 261
>sp|B1JJ30|ARNA_YERPY Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA
PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAE 579
>sp|Q93PD8|ARNA_YERPS Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=arnA
PE=2 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAE 579
>sp|A4TIM4|ARNA_YERPP Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
(strain Pestoides F) GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>sp|Q1CIH7|ARNA_YERPN Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>sp|A9R093|ARNA_YERPG Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>sp|Q8ZDX8|ARNA_YERPE Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>sp|B2K5L3|ARNA_YERPB Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=arnA
PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAE 579
>sp|Q1C742|ARNA_YERPA Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAE 579
>sp|A7FHH4|ARNA_YERP3 Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=arnA PE=3 SV=1
Length = 667
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAE 579
>sp|A4SQW9|ARNA_AERS4 Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
salmonicida (strain A449) GN=arnA PE=3 SV=1
Length = 663
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 25/268 (9%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ + E+ +D S L ++I HP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLKDGRYEIYGLDI----SASALGRFIDHPHFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 434
Query: 148 SEVYG--DPLVHPQDESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +DES V PI R Y K++ + +++ Y ++ G+ + R F
Sbjct: 435 SEVYGMCDDHSFDEDESRL-IVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPF 493
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 494 NWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRII 553
Query: 259 EGE----NTGPINIGNP-GEFTMLELAE 281
E + + INIG+P E ++L++AE
Sbjct: 554 ENKGNRCDGQIINIGSPDNEASILQMAE 581
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
+ R+L+ G GFIG+HL ++L+++ ++ +D GS + ++IG+PRF I D
Sbjct: 313 KRRQRVLILGVNGFIGNHLTERLLKDGNYDIYGMD---IGSS-AIERFIGNPRFHFIEGD 368
Query: 90 VT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
V+ E + + D I L A+PI Y NP++ + + L ++ + RI+
Sbjct: 369 VSIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRII 428
Query: 144 LTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
STSEVYG D +D S V PI R Y K++ + +++ Y + G++ +
Sbjct: 429 FPSTSEVYGMCDDKEFDEDNSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTL 487
Query: 201 ARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
R FN GPR++ I R ++ I + G P+ + G Q R F ++D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEAL 547
Query: 255 IRLMEGENTGP----INIGNP-GEFTMLELAE 281
R++E + INIGNP E ++ ELAE
Sbjct: 548 FRIIENRDNKCDGQIINIGNPTNEASIRELAE 579
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 23/267 (8%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ EV +D GS + ++IGHP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLD---IGSS-AVDRFIGHPNFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPST 434
Query: 148 SEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG H DE S V PI R Y K++ + +++ Y ++ G+ + R FN
Sbjct: 435 SEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFN 494
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++E
Sbjct: 495 WMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIE 554
Query: 260 GE----NTGPINIGNP-GEFTMLELAE 281
+ + INIGNP E ++ ++AE
Sbjct: 555 NKENRCDGQIINIGNPDNEASIQQMAE 581
>sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=arnA PE=3 SV=1
Length = 661
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ E+ +D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLDCPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE V PI R Y K++ + +++ Y ++G++ + R FN
Sbjct: 433 SEVYGMCTDKNFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIE 552
Query: 260 ---GENTGP-INIGNP-GEFTMLELAE 281
G G INIGNP E ++ ELAE
Sbjct: 553 NKDGRCDGQIINIGNPDNEASIKELAE 579
>sp|B7LM76|ARNA_ESCF3 Bifunctional polymyxin resistance protein ArnA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=arnA PE=3 SV=1
Length = 660
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D
Sbjct: 313 QRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLTHPNFHFVEGD 368
Query: 90 VT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
++ E + + D + L A+PI Y NP++ + + L ++ + RI+
Sbjct: 369 ISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRII 428
Query: 144 LTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
STSEVYG DE + V PI R Y K++ + +++ Y + G++ +
Sbjct: 429 FPSTSEVYGMCTDKFFDEDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 489 RPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 548
Query: 256 RLMEGENTGP------INIGNPGEFTMLE 278
R++ ENTG INIGNP +E
Sbjct: 549 RII--ENTGNRCDGEIINIGNPDNEASIE 575
>sp|B5XTK9|ARNA_KLEP3 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae (strain 342) GN=arnA PE=3 SV=1
Length = 661
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 23/267 (8%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ E+ +D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLESPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE V PI R Y K++ + +++ Y ++ ++ + R FN
Sbjct: 433 SEVYGMCTDKNFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIE 552
Query: 260 ---GENTGP-INIGNP-GEFTMLELAE 281
G G INIGNP E ++ ELAE
Sbjct: 553 NKDGRCDGQIINIGNPENEASIKELAE 579
>sp|B2VBI9|ARNA_ERWT9 Bifunctional polymyxin resistance protein ArnA OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3
SV=1
Length = 660
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 23/271 (8%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ ++ EV +D GS D + ++IGH RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLVDDNFEVFGLD---IGS-DAIGRFIGHERFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE V PI R Y K++ + +++ Y + G+ + R FN
Sbjct: 433 SEVYGMCTDASFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L ++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDIHDGIEALFLIIE 552
Query: 260 GENTGP----INIGNP-GEFTMLELAENVKE 285
+ INIGNP E ++ +LAE + E
Sbjct: 553 NKQKNCDGQIINIGNPENEASIKQLAEQLLE 583
>sp|Q2NRV7|ARNA_SODGM Bifunctional polymyxin resistance protein ArnA OS=Sodalis
glossinidius (strain morsitans) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 20 PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG 79
P PL K R+L+ G GFIG+HL ++L+ + E+ +D D + +++
Sbjct: 306 PRPLVSHK---RRTRVLILGVNGFIGNHLTERLLRDGNYEIYGLDI----GTDAISRFMV 358
Query: 80 HPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG 133
+P F + D++ E + + D + L A+PI Y NP++ + + L ++
Sbjct: 359 NPLFHFVEGDISIHSEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIIR 418
Query: 134 LAKRVGARILLTSTSEVYG---DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFD 189
+ RI+ STSEVYG DP+ D S V PI R Y K++ + +++
Sbjct: 419 HCVKYQKRIIFPSTSEVYGMCTDPVFDEDDSSL--IVGPINKQRWIYSVSKQLLDRVLWA 476
Query: 190 YHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 243
Y + G+ + R FN GPR++ I R ++ I + G + + G Q R
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSHIKLVDGGAQKRC 536
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
F +SD ++ L R++E ++ INIGNP E ++ +LAE
Sbjct: 537 FTDISDGIEALFRIIENKDNNCDGQIINIGNPDNEASIRQLAE 579
>sp|A1JPN5|ARNA_YERE8 Bifunctional polymyxin resistance protein ArnA OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=arnA PE=3 SV=1
Length = 687
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 25/276 (9%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ + + EV +D GS D + +++ +P F
Sbjct: 309 SQKLKRRTRVLILGVNGFIGNHLTERLLRDNRYEVYGLD---IGS-DAICRFLDNPNFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + +
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDSSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKENL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE 281
++ L R++E + INIGNP E ++ ELAE
Sbjct: 544 IEALFRIIENRDGACDGQIINIGNPTNEASIRELAE 579
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELA 280
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELA 280
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELA 280
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELA 578
>sp|A8FRR2|ARNA_SHESH Bifunctional polymyxin resistance protein ArnA OS=Shewanella
sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 31/275 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
++L+ G GFIG+HL +L+++ K E+ +D S + + + HP F + D+T
Sbjct: 319 KVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDITIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 NEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPST 434
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV------RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
SEVYG DE + + +P+ R Y K++ + +++ Y ++ ++ +
Sbjct: 435 SEVYG----MCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLF 490
Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
R FN GPR++ + R ++ I + G P+ + G Q R F +S+ ++ L
Sbjct: 491 RPFNWMGPRLDSLNSARVGSSRAITQLILNLVEGTPIKLIDGGEQKRCFTDISEAIEALF 550
Query: 256 RLMEGE----NTGPINIGNP-GEFTMLELAENVKE 285
R++E + + INIG+P E ++ +AE + E
Sbjct: 551 RVIENKDGLCDGQIINIGSPDNEASIKVMAETLVE 585
>sp|Q1R9G0|ARNA_ECOUT Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain UTI89 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|A1ADA7|ARNA_ECOK1 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O1:K1 / APEC GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B7MG22|ARNA_ECO45 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|Q32DT3|ARNA_SHIDS Bifunctional polymyxin resistance protein ArnA OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=arnA PE=3 SV=2
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B7MXT6|ARNA_ECO81 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O81 (strain ED1a) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFMNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B7NNT4|ARNA_ECO7I Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|Q31YK2|ARNA_SHIBS Bifunctional polymyxin resistance protein ArnA OS=Shigella boydii
serotype 4 (strain Sb227) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B7N5M0|ARNA_ECOLU Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPDNEASIEELGE 579
>sp|B5YXP8|ARNA_ECO5E Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|Q8XDZ3|ARNA_ECO57 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O157:H7 GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B7UFR7|ARNA_ECO27 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLIDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|Q3YZV1|ARNA_SHISS Bifunctional polymyxin resistance protein ArnA OS=Shigella sonnei
(strain Ss046) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|P77398|ARNA_ECOLI Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12) GN=arnA PE=1 SV=1
Length = 660
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B1IXT2|ARNA_ECOLC Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|B1X8W8|ARNA_ECODH Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / DH10B) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
>sp|C4ZU97|ARNA_ECOBW Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=arnA PE=3 SV=1
Length = 660
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 27/269 (10%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAE 281
EN G INIGNP E ++ EL E
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGE 579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,060,349
Number of Sequences: 539616
Number of extensions: 5229884
Number of successful extensions: 14420
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 13502
Number of HSP's gapped (non-prelim): 669
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)