BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022416
(297 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NIO|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|E Chain E, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|F Chain F, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
Length = 319
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 24/168 (14%)
Query: 63 SLLGVPLGHNSSFLQGPAFAPPRIR-EAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQE 121
+ +GVPL +S G F P IR E++ N T G D + D+GDV +
Sbjct: 41 AFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMAT--GAAPFDSLNVADIGDVAINT 98
Query: 122 IRDCGVDDDRLMNVITESVKLVMEE------DPLHPLVLGGDHSISFPVIRAVSEKLGGP 175
+ E+V+++ +E + PL LGGDH+I+ P++RA+ K G
Sbjct: 99 FN------------LLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIX-KXHGX 145
Query: 176 VDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQVGIRS 221
V ++H+DAH D+ D G +H ++F R +E R++Q+G+R+
Sbjct: 146 VGLVHVDAHADVNDHMFGEXIAHGTTFRRAVEEDLLDCDRVVQIGLRA 193
>pdb|3LHL|A Chain A, Crystal Structure Of A Putative Agmatinase From
Clostridium Difficile
Length = 287
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 64 LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIR 123
+ GV +S G FA R+ + T S + +L D + D GD+ +
Sbjct: 12 VFGVGFDGTTSNRPGARFASSSXRKEFYGLETYSPFLD-LDLEDYNIC-DYGDLEIS--- 66
Query: 124 DCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 183
G + L + E+ K+V D P +GG+H ++ P +AV EK + V+H DA
Sbjct: 67 -VGSTEQVLKEIYQETYKIV--RDSKVPFXIGGEHLVTLPAFKAVHEKYN-DIYVIHFDA 122
Query: 184 HPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKE 225
H D+ + + +K SHA+ RI + ++ Q GIRS TKE
Sbjct: 123 HTDLREEYNNSKNSHATVIKRIWDIVGDNKIFQFGIRSGTKE 164
>pdb|3M1R|A Chain A, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|B Chain B, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|C Chain C, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|D Chain D, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|E Chain E, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|F Chain F, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 322
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 42 RERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEE 101
R+ K + G + +L+GVPL +S G +FAP IR+A+ S S E
Sbjct: 20 RDVTKXSDLIATWDGQDIKGPALIGVPLSKSSISHSGASFAPGTIRQALKHSSAYSA-EL 78
Query: 102 GKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDP-LHPLVLGGDHSI 160
G+ + +L D+GD+ + D + + I ++ ++ + P PL+LGGD+SI
Sbjct: 79 GEHVVS-ELLYDLGDIDIHV-----TDIVKSHHHIFQTXHALLSDHPDWVPLILGGDNSI 132
Query: 161 SFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQVG 218
S+ I+A+++ G V+ DAH D+ + +G ++ + F R+++ + L+Q+G
Sbjct: 133 SYSTIKAIAQTKGTTA-VIQFDAHHDVRNTEDGGP-TNGTPFRRLLDEEIIEGQHLIQLG 190
Query: 219 IRSITK 224
IR +
Sbjct: 191 IREFSN 196
>pdb|4DZ4|A Chain A, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|B Chain B, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|C Chain C, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|D Chain D, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|E Chain E, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|F Chain F, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 68 PLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELND-PRVLTDVGDVPVQEIRDCG 126
PL ++F G P +R A + + ELN P D+ V + DC
Sbjct: 55 PLDLATTFRSGARLGPSAVRAA---------SVQLAELNPYPWGFDPFDDLAVIDYGDCW 105
Query: 127 VDDDRLMNV---ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 183
D +++ I E + +++ D L LGGDH I++P++ A ++K G P+ ++H DA
Sbjct: 106 FDAHHPLSIKPAIVEHARTILQSD-ARMLTLGGDHYITYPLLIAHAQKYGKPLSLIHFDA 164
Query: 184 HPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQVGIRSITKE 225
H D + + +H + F + ++ G + +QVGIR+ +
Sbjct: 165 HCDTWADDAPDSLNHGTMFYKAVKDGLIDPKASVQVGIRTWNDD 208
>pdb|1WOG|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
Length = 305
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 48 KGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELND 107
+ LV+ G A + LGVP F G FAP +REA T +GK
Sbjct: 17 RAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQ 76
Query: 108 PRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRA 167
D GDV + + + + DR ITE+ + V + P+ LGGDHS+S+P++RA
Sbjct: 77 GVTFADAGDVILPSL-EPQLAHDR----ITEAARQVRGRCRV-PVFLGGDHSVSYPLLRA 130
Query: 168 VSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEG 208
++ + V+ LDAH D D K+S++S F R E
Sbjct: 131 FADVPD--LHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEA 169
>pdb|3PZL|A Chain A, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
pdb|3PZL|B Chain B, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
pdb|3PZL|C Chain C, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
Length = 313
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 60 ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPV 119
A + G+P + SS+ +G +AP IR A + + G +L D+GD
Sbjct: 35 AKYVVFGIPFDNTSSYRRGSKYAPDSIRGA-YVNLESYEYSYGIDLL-ASGXADLGDXEE 92
Query: 120 QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVL 179
E + +D ESV + D P+ LGG+HSI+ +RA+ + VD++
Sbjct: 93 SEDVEYVID-------TVESVVSAVXSDGKIPIXLGGEHSITVGAVRALPKD----VDLV 141
Query: 180 HLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKE 225
+DAH D ++ GNKY+HA R ++ R+ +GIRS+++E
Sbjct: 142 IVDAHSDFRSSYXGNKYNHACVTRRALDLLGEGRITSIGIRSVSRE 187
>pdb|3NIP|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|E Chain E, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|F Chain F, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIQ|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase
pdb|3NIQ|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase
Length = 326
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 151 PLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEG-NKYSHASSFARIMEGG 209
PL +GGDH ++ P+ RA+ + P+ ++H DAH D D + G N Y+H + F R +E G
Sbjct: 119 PLSVGGDHLVTLPIFRALGRER--PLGMVHFDAHSDTNDRYFGDNPYTHGTPFRRAIEEG 176
Query: 210 Y--ARRLLQVGIR 220
R +Q+GIR
Sbjct: 177 LLDPLRTVQIGIR 189
>pdb|1GQ6|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ6|B Chain B, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ6|C Chain C, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|B Chain B, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|C Chain C, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|D Chain D, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|E Chain E, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|F Chain F, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 152 LVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY- 210
L++GGDHS++ +RAV+E+ G P+ V+HLDAH D AF G +Y H + F ++
Sbjct: 115 LMIGGDHSLTVAALRAVAEQHG-PLAVVHLDAHSDTNPAFYGGRYHHGTPFRHGIDEKLI 173
Query: 211 -ARRLLQVGIRS 221
++Q+GIR
Sbjct: 174 DPAAMVQIGIRG 185
>pdb|1CEV|A Chain A, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|B Chain B, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|C Chain C, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|D Chain D, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|E Chain E, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|F Chain F, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|2CEV|A Chain A, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|B Chain B, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|C Chain C, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|D Chain D, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|E Chain E, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|F Chain F, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|3CEV|A Chain A, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|B Chain B, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|C Chain C, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|D Chain D, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|E Chain E, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|F Chain F, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|4CEV|A Chain A, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|B Chain B, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|C Chain C, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|D Chain D, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|E Chain E, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|F Chain F, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|5CEV|A Chain A, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|B Chain B, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|C Chain C, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|D Chain D, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|E Chain E, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|F Chain F, Arginase From Bacillus Caldevelox, L-Lysine Complex
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 35/164 (21%)
Query: 111 LTDVGDVPV---QEIRDCGVDDDRLMN---VITESVKLVMEEDPL-----HPLVLGGDHS 159
+ D+GD+P+ + + + G D RL N V + KL D + PLVLGGDHS
Sbjct: 43 IEDLGDIPIGKAERLHEQG--DSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHS 100
Query: 160 ISFPVIRAVS---EKLGGPVDVLHLDAHPDIYDA-------FEGNKYSHASSF---ARIM 206
I+ + V+ E+LG V+ DAH D+ A G + + F A
Sbjct: 101 IAIGTLAGVAKHYERLG----VIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQ 156
Query: 207 EGGYARRL-----LQVGIRSITKEGREQGKRFGVEQYEMRTFSR 245
GGY+ ++ + +G+RS+ + ++ + G++ Y M R
Sbjct: 157 IGGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDR 200
>pdb|4G3H|A Chain A, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|B Chain B, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|C Chain C, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|D Chain D, Crystal Structure Of Helicobacter Pylori Arginase
Length = 330
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 151 PLVLGGDHSISFPVIRAV-SEKLGGPVDVLHLDAHPDIYDAFEGN 194
PL+L +H+ F + +A S + +L+LDAH DI+ A++ +
Sbjct: 84 PLILSSEHANMFGIFQAFRSVHKDKKIGILYLDAHADIHTAYDSD 128
>pdb|2EF4|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|B Chain B, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|D Chain D, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|E Chain E, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|F Chain F, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|G Chain G, Crystal Structure Of The Arginase From Thermus
Thermophilus
Length = 290
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 41/162 (25%)
Query: 113 DVGDVPV----------------QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGG 156
D+GDVPV +EIR + + + E V P+VLGG
Sbjct: 44 DLGDVPVSLARASRRRGRGLAYLEEIRAAALVLKERLAALPEGV---------FPIVLGG 94
Query: 157 DHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYS--HASSFARIMEGGYAR-- 212
DHS+S + + G V V+ +DAH D ++ E + H A + G+ R
Sbjct: 95 DHSLSMGSVAGAAR--GRRVGVVWVDAHAD-FNTPETSPSGNVHGMPLAVLSGLGHPRLT 151
Query: 213 ---------RLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR 245
++ VG+RS+ + K GV Y M R
Sbjct: 152 EVFRAVDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDR 193
>pdb|2EIV|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|C Chain C, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|D Chain D, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|E Chain E, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|F Chain F, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|G Chain G, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|H Chain H, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|I Chain I, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|J Chain J, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|K Chain K, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|L Chain L, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|M Chain M, Crystal Structure Of The Arginase From Thermus
Thermophilus
Length = 291
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 41/162 (25%)
Query: 113 DVGDVPV----------------QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGG 156
D+GDVPV +EIR + + + E V P+VLGG
Sbjct: 45 DLGDVPVSLARASRRRGRGLAYLEEIRAAALVLKERLAALPEGV---------FPIVLGG 95
Query: 157 DHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYS--HASSFARIMEGGYAR-- 212
DHS+S + + G V V+ +DAH D ++ E + H A + G+ R
Sbjct: 96 DHSLSMGSVAGAAR--GRRVGVVWVDAHAD-FNTPETSPSGNVHGMPLAVLSGLGHPRLT 152
Query: 213 ---------RLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR 245
++ VG+RS+ + K GV Y M R
Sbjct: 153 EVFRAVDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDR 194
>pdb|2A0M|A Chain A, Arginase Superfamily Protein From Trypanosoma Cruzi
Length = 316
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 151 PLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIME 207
P V+GG + S P RA+ G V V+++D+H D+ + + + F +++E
Sbjct: 115 PFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLQDGRVHSGTPFRQLLE 171
>pdb|1R9J|A Chain A, Transketolase From Leishmania Mexicana
pdb|1R9J|B Chain B, Transketolase From Leishmania Mexicana
Length = 673
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 186 DIYDAFEGNKYSHA----SSFARIMEGGYARRLLQVGIRSITKEGREQGKRF--GVEQYE 239
+ Y +F KYSHA S F G + + + + + GRE KRF G +
Sbjct: 607 EAYVSFGWEKYSHAHVGMSGFGASAPAGVLYKKFGITVEEVVRTGRELAKRFPDGTAPLK 666
Query: 240 MRTFSR 245
+FS+
Sbjct: 667 NSSFSK 672
>pdb|1T5G|A Chain A, Arginase-F2-L-Arginine Complex
pdb|1T5G|B Chain B, Arginase-F2-L-Arginine Complex
pdb|1T5G|C Chain C, Arginase-F2-L-Arginine Complex
pdb|1T5F|A Chain A, Arginase I-Aoh Complex
pdb|1T5F|B Chain B, Arginase I-Aoh Complex
pdb|1T5F|C Chain C, Arginase I-Aoh Complex
Length = 314
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLAV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPAISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1ZPE|A Chain A, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|B Chain B, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|C Chain C, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPG|A Chain A, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|B Chain B, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|C Chain C, Arginase I Covalently Modified With Propylamine At Q19c
Length = 314
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLAV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPAISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|3E8Q|A Chain A, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|B Chain B, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|C Chain C, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E9B|A Chain A, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|B Chain B, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|C Chain C, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
Length = 323
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDI---YDAFEGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI A GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTASSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|3E6V|A Chain A, X-Ray Structure Of Human Arginase I-D183n Mutant: The
Complex With Abh
pdb|3E6V|B Chain B, X-Ray Structure Of Human Arginase I-D183n Mutant: The
Complex With Abh
Length = 322
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSF-AR 204
LVLGGDHS++ I V LG V+ +DAH DI GN + SF +
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLK 150
Query: 205 IMEG------GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR 245
++G G+ A+ ++ +G+R + K G++ + M R
Sbjct: 151 ELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVNPGEHYILKTLGIKYFSMTEVDR 205
>pdb|1P8S|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1TA1|A Chain A, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|B Chain B, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|C Chain C, H141c Mutant Of Rat Liver Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLCGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1P8N|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1TBJ|A Chain A, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|B Chain B, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|C Chain C, H141a Mutant Of Rat Liver Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1TBL|A Chain A, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|B Chain B, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|C Chain C, H141n Mutant Of Rat Liver Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLNGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1P8Q|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I
Length = 314
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1T4S|A Chain A, Arginase-L-Valine Complex
pdb|1T4S|B Chain B, Arginase-L-Valine Complex
pdb|1T4S|C Chain C, Arginase-L-Valine Complex
pdb|1T4P|A Chain A, Arginase-Dehydro-Abh Complex
pdb|1T4P|B Chain B, Arginase-Dehydro-Abh Complex
pdb|1T4P|C Chain C, Arginase-Dehydro-Abh Complex
pdb|1T4R|A Chain A, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|B Chain B, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|C Chain C, Arginase-descarboxy-nor-noha Complex
pdb|1T4T|A Chain A, Arginase-Dinor-Noha Complex
pdb|1T4T|B Chain B, Arginase-Dinor-Noha Complex
pdb|1T4T|C Chain C, Arginase-Dinor-Noha Complex
Length = 314
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|3E6K|A Chain A, X-Ray Structure Of Human Arginase I: The Mutant D183a In
Complex With Abh
pdb|3E6K|B Chain B, X-Ray Structure Of Human Arginase I: The Mutant D183a In
Complex With Abh
Length = 322
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSF-AR 204
LVLGGDHS++ I V LG V+ +DAH DI GN + SF +
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLK 150
Query: 205 IMEG------GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR 245
++G G+ A+ ++ +G+R + K G++ + M R
Sbjct: 151 ELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVAPGEHYILKTLGIKYFSMTEVDR 205
>pdb|1TBH|A Chain A, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|B Chain B, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|C Chain C, H141d Mutant Of Rat Liver Arginase I
Length = 314
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLDGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 176 DVDPGEHYIIKTLGIKYFSM 195
>pdb|1HQG|A Chain A, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|B Chain B, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|C Chain C, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
Length = 323
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLXGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|3E8Z|A Chain A, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|B Chain B, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|C Chain C, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
Length = 323
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDIATPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|1RLA|A Chain A, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|B Chain B, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|C Chain C, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1D3V|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1D3V|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1HQ5|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQ5|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQF|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQH|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1R1O|A Chain A, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|B Chain B, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|C Chain C, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
Length = 323
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|1HQX|A Chain A, R308k Arginase Variant
pdb|1HQX|B Chain B, R308k Arginase Variant
pdb|1HQX|C Chain C, R308k Arginase Variant
Length = 323
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|1WVB|A Chain A, Crystal Structure Of Human Arginase I: The Mutant E256q
pdb|1WVB|B Chain B, Crystal Structure Of Human Arginase I: The Mutant E256q
Length = 322
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSF 202
LVLGGDHS++ I V LG V+ +DAH DI GN + SF
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSF 147
>pdb|2RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
Length = 323
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEM 240
+ K G++ + M
Sbjct: 181 DVDPGEHYIIKTLGIKYFSM 200
>pdb|1WVA|A Chain A, Crystal Structure Of Human Arginase I From Twinned Crystal
pdb|1WVA|B Chain B, Crystal Structure Of Human Arginase I From Twinned Crystal
pdb|2AEB|A Chain A, Crystal Structure Of Human Arginase I At 1.29 A Resolution
And Exploration Of Inhibition In Immune Response.
pdb|2AEB|B Chain B, Crystal Structure Of Human Arginase I At 1.29 A Resolution
And Exploration Of Inhibition In Immune Response.
pdb|2PHA|A Chain A, Crystal Structure Of Native, Unliganded Human Arginase At
1.90 Resolution
pdb|2PHA|B Chain B, Crystal Structure Of Native, Unliganded Human Arginase At
1.90 Resolution
pdb|2PHO|A Chain A, Crystal Structure Of Human Arginase I Complexed With
Thiosemicarbazide At 1.95 Resolution
pdb|2PHO|B Chain B, Crystal Structure Of Human Arginase I Complexed With
Thiosemicarbazide At 1.95 Resolution
pdb|2PLL|A Chain A, Crystal Structure Of Perdeuterated Human Arginase I
pdb|2PLL|B Chain B, Crystal Structure Of Perdeuterated Human Arginase I
pdb|2ZAV|A Chain A, Arginase I (homo Sapiens): Native And Unliganded Structure
At 1.70 A Resolution
pdb|2ZAV|B Chain B, Arginase I (homo Sapiens): Native And Unliganded Structure
At 1.70 A Resolution
pdb|3DJ8|A Chain A, Synthesis Of (2s)-2-Amino-7,8-Epoxyoctanoic Acid And
Structure Of Its Metal-Bridging Complex With Human
Arginase I
pdb|3DJ8|B Chain B, Synthesis Of (2s)-2-Amino-7,8-Epoxyoctanoic Acid And
Structure Of Its Metal-Bridging Complex With Human
Arginase I
pdb|3F80|A Chain A, (S)-2-Amino-6-Nitrohexanoic Acid Binds To Human Arginase I
Through Multiple Nitro-Metal Coordination Interactions
In The Binuclear Manganese Cluster. Resolution 1.60 A.
pdb|3F80|B Chain B, (S)-2-Amino-6-Nitrohexanoic Acid Binds To Human Arginase I
Through Multiple Nitro-Metal Coordination Interactions
In The Binuclear Manganese Cluster. Resolution 1.60 A.
pdb|3KV2|A Chain A, High Resolution Structure Of Human Arginase I In Complex
With The Strong Inhibitor
N(Omega)-Hydroxy-Nor-L-Arginine (Nor-Noha)
pdb|3KV2|B Chain B, High Resolution Structure Of Human Arginase I In Complex
With The Strong Inhibitor
N(Omega)-Hydroxy-Nor-L-Arginine (Nor-Noha)
pdb|3GMZ|A Chain A, Crystal Of Human Arginase In Complex With L-Ornithine.
Resolution 1.43 A.
pdb|3GMZ|B Chain B, Crystal Of Human Arginase In Complex With L-Ornithine.
Resolution 1.43 A.
pdb|3GN0|A Chain A, Crystal Structure Of Human Arginase I In Complex With
Difluoromethylornithine (Dfmo)
pdb|3GN0|B Chain B, Crystal Structure Of Human Arginase I In Complex With
Difluoromethylornithine (Dfmo)
pdb|3LP4|A Chain A, Crystal Structure Of Human Arginase I In Complex With
L-Lysi Resolution.
pdb|3LP4|B Chain B, Crystal Structure Of Human Arginase I In Complex With
L-Lysi Resolution.
pdb|3LP7|A Chain A, Crystal Structure Of Human Arginase I In Complex With
Inhibi N(Omega)-Hydroxy-L-Arginine (Noha), 2.04a
Resolution
pdb|3LP7|B Chain B, Crystal Structure Of Human Arginase I In Complex With
Inhibi N(Omega)-Hydroxy-L-Arginine (Noha), 2.04a
Resolution
pdb|3MFV|A Chain A, Crystal Structure Of Human Arginase I In Complex With 2-
Aminohomohistidine
pdb|3MFV|B Chain B, Crystal Structure Of Human Arginase I In Complex With 2-
Aminohomohistidine
pdb|3MFW|A Chain A, Crystal Structure Of Human Arginase I In Complex With L-2-
Aminohistidine And Sulphate
pdb|3MFW|B Chain B, Crystal Structure Of Human Arginase I In Complex With L-2-
Aminohistidine And Sulphate
pdb|3MJL|A Chain A, Crystal Structure Of Human Arginase I In Complex With 2-
Aminoimidazole. Resolution 1.90 A.
pdb|3MJL|B Chain B, Crystal Structure Of Human Arginase I In Complex With 2-
Aminoimidazole. Resolution 1.90 A.
pdb|3SJT|A Chain A, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Me-Abh, Resolution 1.60 A, Twinned Structure
pdb|3SJT|B Chain B, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Me-Abh, Resolution 1.60 A, Twinned Structure
pdb|3SKK|A Chain A, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Fabh, Resolution 1.70 A, Twinned Structure
pdb|3SKK|B Chain B, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Fabh, Resolution 1.70 A, Twinned Structure
pdb|3TF3|A Chain A, Crystal Structure Of Metal-Free Human Arginase I
pdb|3TF3|B Chain B, Crystal Structure Of Metal-Free Human Arginase I
pdb|3TH7|A Chain A, Crystal Structure Of Unliganded Co2+2-Hai (Ph 7.0)
pdb|3TH7|B Chain B, Crystal Structure Of Unliganded Co2+2-Hai (Ph 7.0)
pdb|3THE|A Chain A, Crystal Structure Of Co2+2-Hai (Ph 8.5)
pdb|3THE|B Chain B, Crystal Structure Of Co2+2-Hai (Ph 8.5)
pdb|3THH|A Chain A, Crystal Structure Of The Co2+2-Hai-Abh Complex
pdb|3THH|B Chain B, Crystal Structure Of The Co2+2-Hai-Abh Complex
pdb|3THJ|A Chain A, Crystal Structure Of The Co2+2-Hai-L-Orn Complex
pdb|3THJ|B Chain B, Crystal Structure Of The Co2+2-Hai-L-Orn Complex
pdb|4FCI|A Chain A, Crystal Structure Of The Mn2+2-human Arginase I-agpa
Complex
pdb|4FCI|B Chain B, Crystal Structure Of The Mn2+2-human Arginase I-agpa
Complex
pdb|4FCK|A Chain A, Crystal Structure Of The Co2+2-human Arginase I-agpa
Complex
pdb|4FCK|B Chain B, Crystal Structure Of The Co2+2-human Arginase I-agpa
Complex
pdb|4GSM|A Chain A, Crystal Structure Of Ni2+2-Human Arginase I
pdb|4GSM|B Chain B, Crystal Structure Of Ni2+2-Human Arginase I
pdb|4GSV|A Chain A, Crystal Structure Of The Ni2+2-Human Arginase I-Abh
Complex
pdb|4GSV|B Chain B, Crystal Structure Of The Ni2+2-Human Arginase I-Abh
Complex
pdb|4GSZ|A Chain A, Crystal Structure Of The Zn2+5-Human Arginase I-Abh
Complex
pdb|4GSZ|B Chain B, Crystal Structure Of The Zn2+5-Human Arginase I-Abh
Complex
pdb|4GWC|A Chain A, Crystal Structure Of Mn2+2,Zn2+-Human Arginase I
pdb|4GWC|B Chain B, Crystal Structure Of Mn2+2,Zn2+-Human Arginase I
pdb|4GWD|A Chain A, Crystal Structure Of The Mn2+2,Zn2+-Human Arginase I-Abh
Complex
pdb|4GWD|B Chain B, Crystal Structure Of The Mn2+2,Zn2+-Human Arginase I-Abh
Complex
Length = 322
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSF 202
LVLGGDHS++ I V LG V+ +DAH DI GN + SF
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSF 147
>pdb|4ITY|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase
pdb|4IU0|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Abh
pdb|4IU1|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Nor-noha
pdb|4IU4|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Bec
pdb|4IU5|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Catalytic Product L-ornithine
Length = 330
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 136 ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDI 187
I + V+ V E+ PL +GGDHSI+ + V + V+ +DAH DI
Sbjct: 94 IYKCVRRVAEQGRF-PLTIGGDHSIALGTVAGVL-SVHPDAGVIWVDAHADI 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,055,656
Number of Sequences: 62578
Number of extensions: 320894
Number of successful extensions: 683
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 664
Number of HSP's gapped (non-prelim): 43
length of query: 297
length of database: 14,973,337
effective HSP length: 98
effective length of query: 199
effective length of database: 8,840,693
effective search space: 1759297907
effective search space used: 1759297907
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)