Citrus Sinensis ID: 022418

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
Protein Sequence
MIRQGLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQVL
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHccccccccHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHHcHHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEcccHHHEcccccccccccc
Coil and Loop (DISEMBL)
mirqglskkvPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQtakelgpnatfiacdvtkesdvsdavdftISKHNqldimynnagvacktprsiVDLNLEVFDQVMRINVRGVVAGIKHStrvmiprrsgcilCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGirincispfaiptpfVMEEMSQIYAGVDASRLLELVYSTgvlegthcepndIANAALYLAsddakyvsghnlvvdggftsfknlklpapvqvl
Flexible Loop (DISEMBL)
mirqglskkvpisiALLAercsrglstesrkleeKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVagikhstrvmiprrsGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGftsfknlklpapvqvl
Low Complexity Region (SEG)
MIRQGLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQVL
Disordered region (IsUnstruct)
***********ISIALLAERC************EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK********
Disordered Region (DISOPRED)
**********************************KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ**************YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPA*****
Disordered Region (DISEMBL)
MIRQGLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQVL
Disordered Region (DISPRO)
****GLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIRQGLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	297	2.2.26 [Sep-21-2011]
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.868	0.851	0.492	1e-64
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.851	0.947	0.484	1e-63
P50160	336	Sex determination protein	N/A	no	0.872	0.770	0.427	2e-57
O80713	257	Short-chain dehydrogenase	no	no	0.831	0.961	0.457	2e-57
O80714	258	Short-chain dehydrogenase	no	no	0.835	0.961	0.437	2e-57
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.878	0.875	0.438	2e-56
F4J300	259	Short-chain dehydrogenase	no	no	0.838	0.961	0.430	9e-55
Q94K41	257	Short-chain dehydrogenase	no	no	0.845	0.976	0.409	2e-51
Q7FAE1	274	Momilactone A synthase OS	no	no	0.855	0.927	0.440	2e-50
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.861	0.898	0.421	1e-47

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/270 (49%), Positives = 177/270 (65%), Gaps = 12/270 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-----PNATF 84
           ++LE KVA+ITG A GIGKAT   F  +GA VVIAD+ +  G   AK L      P   F
Sbjct: 30  KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVAC--KTPRSIVDLNLEVFDQVMRINV 142
           I+CDV+ E+DV + V+ T++++ +LDI++NNAGV    K  +SI+D + + FD VMR+NV
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 143 RGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           RGV  G+KH  R MI R   GCI+ TASV G++GG+  H Y+ SK AI+GL K+ A EL 
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAG----VDASRLLELVYSTGVLEGTHCEPNDIA 257
           +YGIR+NCISPF + T  ++    +   G     D   + E V S   L+G     NDIA
Sbjct: 210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIA 269

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTSFKN 287
            AALYLASD++KYV+GHNLVVDGG T+ +N
Sbjct: 270 EAALYLASDESKYVNGHNLVVDGGVTTARN 299

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  243 bits (620), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/256 (48%), Positives = 169/256 (66%), Gaps = 3/256 (1%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACD 88
           +LE KVAL+TG ASGIG++ A  FI +GAK+ I D+Q +LGQQ ++ LG  P+A +  CD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E DV  AVDFT  K+  +DIM NNAG+       I D +   F +V  INV GV  G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           +KH+ R+MIP+  G I+  ASV+ ++ G   H Y+ +K A++GL KS+AAEL  +GIR+N
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASR-LLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           C+SP+A+PT   M  + +     DA R  L  V S   L+G    PND+A A LYLA+++
Sbjct: 182 CVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEE 241

Query: 268 AKYVSGHNLVVDGGFT 283
           +KYVSG NLV+DGGF+
Sbjct: 242 SKYVSGLNLVIDGGFS 257

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 172/283 (60%), Gaps = 24/283 (8%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           ++L+ KVA++TG A GIG+A    F  +GA+VVIADI    G+  A  LGP  +F+ CDV
Sbjct: 51  KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDV 110

Query: 90  TKESDVSDAVDFTISKHN-QLDIMYNNAGV---ACKTPRSIVDLNLEVFDQVMRINVRGV 145
           + E DV  AVD+ +S+H  +LD+  NNAGV     +  RSI+  +   FD+V+R+N  G 
Sbjct: 111 SVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGA 170

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G+KH+ R M PRR+G I+  ASV  +LGGL  H Y+ SK AI+GL K+ A EL  +G+
Sbjct: 171 ALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGV 230

Query: 206 RINCISPFAIPTPFVMEEMSQ--------------------IYAGVDASRLLELVYSTGV 245
           R+NC+SPF + TP ++    Q                    + +  +  ++ E+V     
Sbjct: 231 RVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLAT 290

Query: 246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL 288
           L+G    P DIA A L+LASD+A+Y+SGHNLVVDGG T+ +NL
Sbjct: 291 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 333

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/260 (45%), Positives = 168/260 (64%), Gaps = 13/260 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDV 89
           +L+ K+A+ITG ASGIG      F  +GAKVVI D Q +LGQ  A  +G + A+F  CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E +V +AV FT+ K+ +LD++++NAGV  + P S +DLNLE FD+ M +NVRG  A I
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGV-MEQPGSFLDLNLEQFDRTMAVNVRGAAAFI 123

Query: 150 KHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           KH+ R M+ + + G I+CT SV   +GG   H Y+ SK A++GLVKS    L +YGIR+N
Sbjct: 124 KHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVN 183

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--TGVLEGTHCEPNDIANAALYLASD 266
            ++P+A+ T     +   +       R++E  YS  TG+L+G   +   +A AAL+LASD
Sbjct: 184 GVAPYAVATAINSRDEETV-------RMVEE-YSAATGILKGVVLKARHVAEAALFLASD 235

Query: 267 DAKYVSGHNLVVDGGFTSFK 286
           D+ YVSG NL VDGG++  K
Sbjct: 236 DSAYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/258 (43%), Positives = 168/258 (65%), Gaps = 10/258 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDV 89
           +LE K+ +ITG ASGIG   A  F  +GAKVVI D+Q +LGQ  A  +G + A+F  CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E++V DAV FT+ KH +LD++++NAGV  +   S +D +LE FD++M +NVRG  A I
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGV-LEPLESFLDFDLERFDRIMAVNVRGAAAFI 123

Query: 150 KHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           KH+ R M+ + + G I+CT SV+  +GG   H Y+ SK  ++GL++S   +L +YGIR+N
Sbjct: 124 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 182

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            ++P+A+ TP    +       V   +L +   + G+L+G   + + +A  AL+LASDD+
Sbjct: 183 GVAPYAVATPMTSHDE------VTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDS 236

Query: 269 KYVSGHNLVVDGGFTSFK 286
            Y+SG NL VDGG+T  K
Sbjct: 237 AYISGQNLAVDGGYTVVK 254

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/269 (43%), Positives = 172/269 (63%), Gaps = 8/269 (2%)

Query: 20  RCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG 79
           + ++ +S   + L+ K+A+ITG ASGIG      F  +GAKVVI DIQ +LGQ  A  +G
Sbjct: 32  KYNKTMSGLRQVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIG 91

Query: 80  PN-ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
            + A+F  C+VT E+DV +AV FT+ KH +LD++++NAGV  +   S++DL+LE FD+ M
Sbjct: 92  LDKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGV-LEAFGSVLDLDLEAFDRTM 150

Query: 139 RINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
            +NVRG  A IKH+ R M+   + G I+CT S+   +GG   H+Y+ SK A++GL++S  
Sbjct: 151 AVNVRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSAC 210

Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           A L +YGIR+N ++P+ + T      M+  Y       L E   + G L+G   +   IA
Sbjct: 211 AGLGQYGIRVNGVAPYGVATG-----MTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIA 265

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTSFK 286
            AAL+LASDD+ Y+SG NLVVDGGF+  K
Sbjct: 266 EAALFLASDDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  214 bits (544), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 112/260 (43%), Positives = 169/260 (65%), Gaps = 11/260 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACD 88
           ++L+ K+ +ITG ASGIG   A  F  +GAKVVI D+Q +LGQ  A  +G + A+F  CD
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +T E++V +AV FT+ KH +LD++++NAGV  +   SI+DL+LE FD+ M +NVRG  A 
Sbjct: 64  ITDETEVENAVKFTVEKHGKLDVLFSNAGV-MEPHGSILDLDLEAFDRTMAVNVRGAAAF 122

Query: 149 IKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           IKH+ R M+   + G I+CT SVT  +GG   H+Y+ SK A++GLV+S    L +YGIR+
Sbjct: 123 IKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRV 182

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLE-LVYSTGVLEGTHCEPNDIANAALYLASD 266
           N ++P+ + T         +       +++E    +T +L+G   +   +A+AAL+LASD
Sbjct: 183 NGVAPYGVATGLTSYNEETV-------KMVEDYCSATAILKGVVLKARHVADAALFLASD 235

Query: 267 DAKYVSGHNLVVDGGFTSFK 286
           D+ Y+SG NL VDGG++  K
Sbjct: 236 DSVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  202 bits (515), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 165/259 (63%), Gaps = 8/259 (3%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACD 88
           ++L+ K+ +ITG ASGIG  +   F  +GA+VVI D+Q +LGQ  A  +G + A++  CD
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E++V +AV FT+ K+ +LD++++NAGV  +   SI+DLNL   D+ + IN+RG  A 
Sbjct: 64  VTNETEVENAVKFTVEKYGKLDVLFSNAGV-IEPFVSILDLNLNELDRTIAINLRGTAAF 122

Query: 149 IKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           IKH+ R M+ +   G I+CT SV   + G A H Y+ SK  ++GL+KS +  L +YGIR+
Sbjct: 123 IKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRV 182

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++PF + TP V          ++ + + +   ++  L+G   +   +A AAL+LASD+
Sbjct: 183 NGVAPFGVATPLVCNGFK-----MEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDE 237

Query: 268 AKYVSGHNLVVDGGFTSFK 286
           + YVSG NL VDGG++  K
Sbjct: 238 SAYVSGQNLAVDGGYSVVK 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  199 bits (507), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 169/261 (64%), Gaps = 7/261 (2%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT- 83
           +S ++RKL  KVA+ITG ASGIG  TA  F+ +GA+VV+ADIQ +LG     ELGP+A+ 
Sbjct: 8   VSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASS 67

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
           ++ CDVT E DV+ AVD  +++  +LD+M+NNAGV+      + +   E F++V+ +N+ 
Sbjct: 68  YVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLV 127

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G   G KH+ RVM P R G I+ TAS++  + G A H Y+ SK A++G  ++ A EL  +
Sbjct: 128 GPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRH 187

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIANAALY 262
           GIR+NC+SP  + TP     M     G+D   +  ++ ++  L+G    + +DIA AAL+
Sbjct: 188 GIRVNCVSPAGVATPLARAAM-----GMDDEAIEAIMANSANLKGAGALKADDIAAAALF 242

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LASDD +YVSG NL VDGG +
Sbjct: 243 LASDDGRYVSGQNLRVDGGLS 263

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/268 (42%), Positives = 162/268 (60%), Gaps = 12/268 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATF 84
           ++L  KVALITG A+GIG++    F  +GAKV I D+Q  LG +  K L        A F
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMRINVR 143
           I  DV  E D+S+AVDF +     LDI+ NNAG+ C  P   I + +L  F+    +NV+
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGL-CGAPCPDIRNYSLSEFEMTFDVNVK 134

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G    +KH+ RVMIP + G I+   SV G++GG+  H+Y  SK A++GL +S+AAEL ++
Sbjct: 135 GAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQH 194

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDAS-RLLELVYSTGVLEGTHCEPNDIANAALY 262
           GIR+NC+SP+A+ T   +  + +     DA         +   L+G     +D+ANA L+
Sbjct: 195 GIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLF 254

Query: 263 LASDDAKYVSGHNLVVDGGFT----SFK 286
           LASDD++Y+SG NL++DGGFT    SFK
Sbjct: 255 LASDDSRYISGDNLMIDGGFTCTNHSFK 282

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
224131252	296	predicted protein [Populus trichocarpa]	0.989	0.993	0.756	1e-128
118484640	295	unknown [Populus trichocarpa]	0.936	0.942	0.781	1e-126
224131256	273	predicted protein [Populus trichocarpa]	0.909	0.989	0.796	1e-125
224131260	271	predicted protein [Populus trichocarpa]	0.902	0.988	0.802	1e-125
356505499	327	PREDICTED: sex determination protein tas	0.996	0.905	0.732	1e-124
255559350	284	short chain alcohol dehydrogenase, putat	0.895	0.936	0.774	1e-122
356505501	301	PREDICTED: sex determination protein tas	0.898	0.887	0.771	1e-121
449451801	302	PREDICTED: zerumbone synthase-like [Cucu	0.922	0.907	0.722	1e-116
297813991	300	predicted protein [Arabidopsis lyrata su	0.898	0.89	0.719	1e-112
145339954	343	Rossmann-fold NAD(P)-binding domain-cont	0.898	0.778	0.711	1e-111

>gi|224131252|ref|XP_002321038.1| predicted protein [Populus trichocarpa] gi|222861811|gb|EEE99353.1| predicted protein [Populus trichocarpa]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/296 (75%), Positives = 261/296 (88%), Gaps = 2/296 (0%)

Query: 1   MIRQGLSKKVPISIAL-LAERCSRGLSTE-SRKLEEKVALITGAASGIGKATAAKFISNG 58
           M + G S++  IS ++ LA+  ++G S++   KLE KVALITGAASGIGKATAAKFI+ G
Sbjct: 1   MFKIGFSRRASISRSVSLAQVFNKGFSSQPGSKLEGKVALITGAASGIGKATAAKFINQG 60

Query: 59  AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGV 118
           A+VVIADIQHQLGQ+TA ELGP+ATFI+CDVTKESDVS AVDF ISK+NQLDIMYNNAGV
Sbjct: 61  ARVVIADIQHQLGQETANELGPDATFISCDVTKESDVSGAVDFAISKYNQLDIMYNNAGV 120

Query: 119 ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA 178
           ACK+P SIVDL+L VFD++M INVRGV+AG+KH++RVMIPRRSG ILCTAS+TGL+GGLA
Sbjct: 121 ACKSPHSIVDLDLAVFDRIMNINVRGVMAGVKHASRVMIPRRSGAILCTASITGLMGGLA 180

Query: 179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE 238
           QHTYSVSK A+ G+VKS+AAELC++GIRINCISPFAIPTPFVMEEM QIY G D  +L+E
Sbjct: 181 QHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTPFVMEEMRQIYPGADDEKLVE 240

Query: 239 LVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPV 294
           ++Y TG LEG +CEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  LPA +
Sbjct: 241 ILYRTGTLEGANCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNPMLPASI 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484640|gb|ABK94192.1| unknown [Populus trichocarpa]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/279 (78%), Positives = 252/279 (90%), Gaps = 1/279 (0%)

Query: 17  LAERCSRGLSTE-SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA 75
           LA+  ++G S++   KLE KVALITGAASGIGKATAAKFI++GA+VVIADIQHQLGQ+TA
Sbjct: 17  LAQVFNKGFSSQPGSKLEGKVALITGAASGIGKATAAKFINHGARVVIADIQHQLGQETA 76

Query: 76  KELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
            ELGP+ATFI+CDVTKESDVS AVDF ISK+NQLDI+YNNAGVACK+P SIVDL+L VFD
Sbjct: 77  NELGPDATFISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLAVFD 136

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
           ++M INVRGV+AG+KH++RVMIPRRSG ILCTAS+TGL+GGLAQHTYSVSK A+ G+VKS
Sbjct: 137 RIMNINVRGVMAGVKHASRVMIPRRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKS 196

Query: 196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           +AAELC++GIRINCISPFAIPTPFVMEEM QIY G D  +L+E++Y TG LEG +CEPND
Sbjct: 197 LAAELCKHGIRINCISPFAIPTPFVMEEMRQIYPGADDEKLVEILYRTGTLEGANCEPND 256

Query: 256 IANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPV 294
           IANAALYLASDDAKYVSGHNLVVDGGFTSFKN  LPA +
Sbjct: 257 IANAALYLASDDAKYVSGHNLVVDGGFTSFKNPMLPASI 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131256|ref|XP_002321039.1| predicted protein [Populus trichocarpa] gi|222861812|gb|EEE99354.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/270 (79%), Positives = 243/270 (90%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           L     KLE KVALITGAASGIGKATAAKFI+ GA+VVIADIQHQLGQ+TA ELGP+ATF
Sbjct: 4   LLCHDSKLEGKVALITGAASGIGKATAAKFINQGARVVIADIQHQLGQETANELGPDATF 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I+CDVTKESDVS AVDF ISK+NQLDI+YNNAGVACK+P SIVDL+L VFD++M INVRG
Sbjct: 64  ISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLAVFDRIMNINVRG 123

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+AG+KH++RVMIPRRSG ILCTAS+TGL+GGLAQHTYSVSK A+ G+VKS+AAELC++G
Sbjct: 124 VMAGVKHASRVMIPRRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHG 183

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IRINCISPFAIPTPFVMEEM QIY G D  +L+E++Y TG LEG +CEPNDIANAALYLA
Sbjct: 184 IRINCISPFAIPTPFVMEEMRQIYPGADDEKLVEILYRTGTLEGANCEPNDIANAALYLA 243

Query: 265 SDDAKYVSGHNLVVDGGFTSFKNLKLPAPV 294
           SDDAKYVSGHNLVVDGGFTSFKN  LPA +
Sbjct: 244 SDDAKYVSGHNLVVDGGFTSFKNPMLPASI 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131260|ref|XP_002321040.1| predicted protein [Populus trichocarpa] gi|222861813|gb|EEE99355.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/268 (80%), Positives = 243/268 (90%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           L     KLE KVALITGAASGIGKATAAKFI++GA+VVIADIQHQLGQ+TA ELGP+ATF
Sbjct: 4   LLCHDSKLEGKVALITGAASGIGKATAAKFINHGARVVIADIQHQLGQETANELGPDATF 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I+CDVTKESDVS AVDF ISK+NQLDI+YNNAGVACK+P SIVDL+L VFD++M INVRG
Sbjct: 64  ISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLAVFDRIMNINVRG 123

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+AG+KH++RVMIPRRSG ILCTAS+TGL+GGLAQHTYSVSK A+ G+VKS+AAELC++G
Sbjct: 124 VMAGVKHASRVMIPRRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHG 183

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IRINCISPFAIPTPFVMEEM QIY G D  +L+E++Y TG LEG +CEPNDIANAALYLA
Sbjct: 184 IRINCISPFAIPTPFVMEEMRQIYPGADDEKLVEILYRTGTLEGANCEPNDIANAALYLA 243

Query: 265 SDDAKYVSGHNLVVDGGFTSFKNLKLPA 292
           SDDAKYVSGHNLVVDGGFTSFKN  LPA
Sbjct: 244 SDDAKYVSGHNLVVDGGFTSFKNPMLPA 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505499|ref|XP_003521528.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1 [Glycine max]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/299 (73%), Positives = 258/299 (86%), Gaps = 3/299 (1%)

Query: 1   MIRQGLSKKVPISI--ALLAERCSRGLSTESR-KLEEKVALITGAASGIGKATAAKFISN 57
           M+R GL     IS   AL AE   R LST++  KL++KVALITGAASGIGKATA KFI+N
Sbjct: 28  MLRMGLRNNSYISYSRALFAESFHRFLSTQTGGKLQDKVALITGAASGIGKATATKFINN 87

Query: 58  GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAG 117
           GAKV+IADI  +LGQ+TAKELGPNATFIACDVT+ESD+S+AVD  +SKH QLDIMYNNAG
Sbjct: 88  GAKVIIADIDQELGQETAKELGPNATFIACDVTQESDISNAVDLAVSKHKQLDIMYNNAG 147

Query: 118 VACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL 177
           +AC++P SIVDL+LE+FD+VM INVRGVVAGIKH+ RVMIPR SG ILCTASVTG++GG+
Sbjct: 148 IACRSPLSIVDLDLELFDKVMDINVRGVVAGIKHAARVMIPRGSGSILCTASVTGVIGGV 207

Query: 178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL 237
           +QHTYS+SK A++G+VKS+A+ELC +GIR+NCISPFAIPTP VM EMSQIY  VDA R  
Sbjct: 208 SQHTYSISKFAVVGIVKSLASELCRHGIRVNCISPFAIPTPLVMGEMSQIYPHVDAQRHE 267

Query: 238 ELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQV 296
           ++V++ GVL+G +CEPNDIANAAL+L SDDAKYVSGHNLVVDGGFTSFKNL LPAP QV
Sbjct: 268 DIVHNAGVLKGANCEPNDIANAALFLVSDDAKYVSGHNLVVDGGFTSFKNLDLPAPNQV 326

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559350|ref|XP_002520695.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223540080|gb|EEF41657.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/266 (77%), Positives = 242/266 (90%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KLE KVALITGAASGIGKATAAKFI+NGAKVV+ADIQHQLGQ TA+ELGP+A FI CDVT
Sbjct: 19  KLEGKVALITGAASGIGKATAAKFINNGAKVVLADIQHQLGQDTAQELGPDAAFIVCDVT 78

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           KE+D+S+AVDF ISK NQLDIMYNNAGVAC TPRSIVDL+L  FD+VM INVRG++AGIK
Sbjct: 79  KEADISNAVDFAISKFNQLDIMYNNAGVACNTPRSIVDLDLAAFDRVMNINVRGIMAGIK 138

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           H++RVMIPRR+G ILCTAS+TG+LGG AQHTYSVSK+ +IG+VKS+AAELC+YGIR+NCI
Sbjct: 139 HASRVMIPRRTGSILCTASITGILGGTAQHTYSVSKATVIGIVKSVAAELCQYGIRVNCI 198

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           SPFAIPTPFVM+E+ Q+Y GVD  RL+E++++TG+L+G +CEP DIANAA YLASDDAKY
Sbjct: 199 SPFAIPTPFVMKELYQLYPGVDPQRLVEILHNTGMLKGANCEPIDIANAAFYLASDDAKY 258

Query: 271 VSGHNLVVDGGFTSFKNLKLPAPVQV 296
           VSGHNLVVDGGFT+ K+L  PAP +V
Sbjct: 259 VSGHNLVVDGGFTTSKSLGFPAPDEV 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505501|ref|XP_003521529.1| PREDICTED: sex determination protein tasselseed-2-like isoform 2 [Glycine max]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/267 (77%), Positives = 242/267 (90%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           RKL++KVALITGAASGIGKATA KFI+NGAKV+IADI  +LGQ+TAKELGPNATFIACDV
Sbjct: 34  RKLQDKVALITGAASGIGKATATKFINNGAKVIIADIDQELGQETAKELGPNATFIACDV 93

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T+ESD+S+AVD  +SKH QLDIMYNNAG+AC++P SIVDL+LE+FD+VM INVRGVVAGI
Sbjct: 94  TQESDISNAVDLAVSKHKQLDIMYNNAGIACRSPLSIVDLDLELFDKVMDINVRGVVAGI 153

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           KH+ RVMIPR SG ILCTASVTG++GG++QHTYS+SK A++G+VKS+A+ELC +GIR+NC
Sbjct: 154 KHAARVMIPRGSGSILCTASVTGVIGGVSQHTYSISKFAVVGIVKSLASELCRHGIRVNC 213

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ISPFAIPTP VM EMSQIY  VDA R  ++V++ GVL+G +CEPNDIANAAL+L SDDAK
Sbjct: 214 ISPFAIPTPLVMGEMSQIYPHVDAQRHEDIVHNAGVLKGANCEPNDIANAALFLVSDDAK 273

Query: 270 YVSGHNLVVDGGFTSFKNLKLPAPVQV 296
           YVSGHNLVVDGGFTSFKNL LPAP QV
Sbjct: 274 YVSGHNLVVDGGFTSFKNLDLPAPNQV 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451801|ref|XP_004143649.1| PREDICTED: zerumbone synthase-like [Cucumis sativus] gi|449506502|ref|XP_004162768.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/274 (72%), Positives = 237/274 (86%)

Query: 22  SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN 81
           +R  S++  +L+ K+ALITGAASGIGKATA KFISNGAKVVIADI+ +LGQ TAK+LGPN
Sbjct: 22  NRRFSSQPARLDGKIALITGAASGIGKATAEKFISNGAKVVIADIKEKLGQDTAKQLGPN 81

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           ATFI CDVTKES++SDAVDFTIS H +LDIMYNNAG+AC TP SI DL+L VFD+VM +N
Sbjct: 82  ATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDLDLAVFDKVMNVN 141

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           VRGV+AG+KH++RVMIP+RSG ILCTASVTGL+GGLAQHTYSVSK A+IG+VKS+A+ELC
Sbjct: 142 VRGVLAGVKHASRVMIPQRSGSILCTASVTGLMGGLAQHTYSVSKVAVIGIVKSLASELC 201

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            YGIR+NCISPF IPTPFV+EEM Q++  V+ ++L ++++    LEGT CE NDIANAAL
Sbjct: 202 RYGIRVNCISPFPIPTPFVIEEMVQLFPRVEEAKLEKMIFDLSALEGTVCETNDIANAAL 261

Query: 262 YLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQ 295
           +LASDDAKYVSGHNLVVDG FT FK+L  P P Q
Sbjct: 262 FLASDDAKYVSGHNLVVDGAFTCFKSLNFPLPDQ 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813991|ref|XP_002874879.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297320716|gb|EFH51138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/267 (71%), Positives = 230/267 (86%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           RKLE KVALITG ASGIGKATA KFIS GAKV+IADIQ Q+G++ A+ELGP+A +  CDV
Sbjct: 33  RKLEGKVALITGGASGIGKATAGKFISYGAKVIIADIQPQIGREAAQELGPSAAYFPCDV 92

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           TKESD+++AVDF +S H +LDIMYNNAG+ CKTP SIVDL+L VFD+V+  NVRGV+AGI
Sbjct: 93  TKESDIANAVDFAVSIHTKLDIMYNNAGIPCKTPLSIVDLDLNVFDKVINTNVRGVIAGI 152

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           KH+ RVMIPR SG I+C  SVTG++GGLAQHTYSVSKSA+IG+V+S A+ELC++ IR+NC
Sbjct: 153 KHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVNC 212

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ISPFAI T FVM+EM QIY GVD SRL+++V STGVL+G  CEP+D+ANAA+YLASDD+K
Sbjct: 213 ISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLDGEVCEPSDVANAAVYLASDDSK 272

Query: 270 YVSGHNLVVDGGFTSFKNLKLPAPVQV 296
           YV+GHNLVVDGGFTS K L  PAP QV
Sbjct: 273 YVNGHNLVVDGGFTSVKTLDFPAPDQV 299

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145339954|ref|NP_567251.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332656878|gb|AEE82278.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/267 (71%), Positives = 228/267 (85%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           RKLE KVALITG ASGIGKATA KFIS+GAKV+IADIQ Q+G++T +ELGP+  +  CDV
Sbjct: 76  RKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFPCDV 135

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           TKESD+++AVDF +S H +LDIMYNNAG+ CKTP SIVDL+L VFD+V+  NVRGV+AGI
Sbjct: 136 TKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVRGVMAGI 195

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           KH+ RVMIPR SG I+C  SVTG++GGLAQHTYSVSKSA+IG+V+S A+ELC++ IR+NC
Sbjct: 196 KHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVNC 255

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ISPFAI T FVM+EM QIY GVD SRL+++V STGVL G  CEP D+ANAA+YLASDD+K
Sbjct: 256 ISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVANAAVYLASDDSK 315

Query: 270 YVSGHNLVVDGGFTSFKNLKLPAPVQV 296
           YV+GHNLVVDGGFT+ K L  PAP QV
Sbjct: 316 YVNGHNLVVDGGFTTVKTLDFPAPDQV 342

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.989	0.857	0.663	2.6e-102
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.898	0.89	0.559	1.6e-79
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.909	0.882	0.557	1.8e-78
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.868	0.851	0.492	1e-61
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.831	0.961	0.457	1.3e-54
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.835	0.961	0.437	3.4e-54
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.838	0.835	0.455	1.9e-53
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.841	0.965	0.432	1.7e-52
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.865	0.901	0.426	2.2e-50
TAIR|locus:2078541	272	ATA1 "TAPETUM 1" [Arabidopsis	0.865	0.944	0.403	3.6e-50

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 195/294 (66%), Positives = 237/294 (80%)

Query:     3 RQGLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVV 62
             +  L K V  +  +     S    + SRKLE KVALITG ASGIGKATA KFIS+GAKV+
Sbjct:    49 KNALFKNVSKNFLIKGISSSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVI 108

Query:    63 IADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT 122
             IADIQ Q+G++T +ELGP+  +  CDVTKESD+++AVDF +S H +LDIMYNNAG+ CKT
Sbjct:   109 IADIQPQIGRETEQELGPSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKT 168

Query:   123 PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY 182
             P SIVDL+L VFD+V+  NVRGV+AGIKH+ RVMIPR SG I+C  SVTG++GGLAQHTY
Sbjct:   169 PPSIVDLDLNVFDKVINTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTY 228

Query:   183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS 242
             SVSKSA+IG+V+S A+ELC++ IR+NCISPFAI T FVM+EM QIY GVD SRL+++V S
Sbjct:   229 SVSKSAVIGIVRSTASELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQS 288

Query:   243 TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQV 296
             TGVL G  CEP D+ANAA+YLASDD+KYV+GHNLVVDGGFT+ K L  PAP QV
Sbjct:   289 TGVLNGEVCEPTDVANAAVYLASDDSKYVNGHNLVVDGGFTTVKTLDFPAPDQV 342

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 151/270 (55%), Positives = 203/270 (75%)

Query:    26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFI 85
             ST SRKLE KVA+ITG ASGIGKATA +F+S GA+V+I DI  + G   A ELG  A F+
Sbjct:    30 STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFL 89

Query:    86 ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRG 144
              CDVT+E  ++ AV+  +++H +LD+M N+AG++C  +P SI DL+++ +D+VMR+NVRG
Sbjct:    90 RCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRG 149

Query:   145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
              V GIKH+ R MIP  SG ILC +S++GL+GGL  H YS+SK  I G+VK++A+ELC++G
Sbjct:   150 TVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHG 209

Query:   205 IRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             +RINCISP  IPTP  +    + +AG  +   +LL +V +TG L+G  CE  D+A AALY
Sbjct:   210 LRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALY 269

Query:   263 LASDDAKYVSGHNLVVDGGFTSFKNLKLPA 292
             LASDDAK+V+GHNLVVDGGFT FK+L LP+
Sbjct:   270 LASDDAKFVTGHNLVVDGGFTCFKSLNLPS 299

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 151/271 (55%), Positives = 200/271 (73%)

Query:    24 GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT 83
             G +  S+KLE KVALITG ASG+GKATA++F+ +GA+VVIAD+  + G +TAKELG  A 
Sbjct:    33 GCTCTSKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAE 92

Query:    84 FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAG-VACKTPRSIVDLNLEVFDQVMRINV 142
             F+ CDVT E+D++ AV+ T+ ++ +LD+MYNNAG V   TP SI  L++  F++VMRINV
Sbjct:    93 FVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINV 152

Query:   143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
              GVV+GIKH+ + MIP RSGCILCT+SV G+ GGLA H+Y++SK    G+VKS A+ELCE
Sbjct:   153 FGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCE 212

Query:   203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             +G+RINCISP  + TP  +  + +++  V   +L E V   G L+G  CE  D+A AALY
Sbjct:   213 HGVRINCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALY 272

Query:   263 LASDDAKYVSGHNLVVDGGFTSFKNLKLPAP 293
             LAS+D KYV+GHNLVVDGG T+FK    P P
Sbjct:   273 LASNDGKYVTGHNLVVDGGMTAFKIAGFPFP 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 133/270 (49%), Positives = 177/270 (65%)

Query:    30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-----PNATF 84
             ++LE KVA+ITG A GIGKAT   F  +GA VVIAD+ +  G   AK L      P   F
Sbjct:    30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query:    85 IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVAC--KTPRSIVDLNLEVFDQVMRINV 142
             I+CDV+ E+DV + V+ T++++ +LDI++NNAGV    K  +SI+D + + FD VMR+NV
Sbjct:    90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query:   143 RGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
             RGV  G+KH  R MI R   GCI+ TASV G++GG+  H Y+ SK AI+GL K+ A EL 
Sbjct:   150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query:   202 EYGIRINCISPFAIPTPFVMEEMSQIYAGV----DASRLLELVYSTGVLEGTHCEPNDIA 257
             +YGIR+NCISPF + T  ++    +   G     D   + E V S   L+G     NDIA
Sbjct:   210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIA 269

Query:   258 NAALYLASDDAKYVSGHNLVVDGGFTSFKN 287
              AALYLASD++KYV+GHNLVVDGG T+ +N
Sbjct:   270 EAALYLASDESKYVNGHNLVVDGGVTTARN 299

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 119/260 (45%), Positives = 168/260 (64%)

Query:    31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDV 89
             +L+ K+A+ITG ASGIG      F  +GAKVVI D Q +LGQ  A  +G + A+F  CDV
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query:    90 TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             T E +V +AV FT+ K+ +LD++++NAGV  + P S +DLNLE FD+ M +NVRG  A I
Sbjct:    65 TNEKEVENAVKFTVEKYGKLDVLFSNAGVM-EQPGSFLDLNLEQFDRTMAVNVRGAAAFI 123

Query:   150 KHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
             KH+ R M+ + + G I+CT SV   +GG   H Y+ SK A++GLVKS    L +YGIR+N
Sbjct:   124 KHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVN 183

Query:   209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--TGVLEGTHCEPNDIANAALYLASD 266
              ++P+A+ T     +   +       R++E  YS  TG+L+G   +   +A AAL+LASD
Sbjct:   184 GVAPYAVATAINSRDEETV-------RMVE-EYSAATGILKGVVLKARHVAEAALFLASD 235

Query:   267 DAKYVSGHNLVVDGGFTSFK 286
             D+ YVSG NL VDGG++  K
Sbjct:   236 DSAYVSGQNLAVDGGYSVVK 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 113/258 (43%), Positives = 168/258 (65%)

Query:    31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDV 89
             +LE K+ +ITG ASGIG   A  F  +GAKVVI D+Q +LGQ  A  +G + A+F  CDV
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query:    90 TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             T E++V DAV FT+ KH +LD++++NAGV  +   S +D +LE FD++M +NVRG  A I
Sbjct:    65 TNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRGAAAFI 123

Query:   150 KHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
             KH+ R M+ + + G I+CT SV+  +GG   H Y+ SK  ++GL++S   +L +YGIR+N
Sbjct:   124 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 182

Query:   209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
              ++P+A+ TP    +       V   +L +   + G+L+G   + + +A  AL+LASDD+
Sbjct:   183 GVAPYAVATPMTSHDE------VTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDS 236

Query:   269 KYVSGHNLVVDGGFTSFK 286
              Y+SG NL VDGG+T  K
Sbjct:   237 AYISGQNLAVDGGYTVVK 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 117/257 (45%), Positives = 165/257 (64%)

Query:    32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACDVT 90
             L+ K+A+ITG ASGIG      F  +GAKVVI DIQ +LGQ  A  +G   A+F  C+VT
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    91 KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
              E+DV +AV FT+ KH +LD++++NAGV  +   S++DL+LE FD+ M +NVRG  A IK
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVL-EAFGSVLDLDLEAFDRTMAVNVRGAAAFIK 162

Query:   151 HSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
             H+ R M+   + G I+CT S+   +GG   H+Y+ SK A++GL++S  A L +YGIR+N 
Sbjct:   163 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 222

Query:   210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
             ++P+ + T      M+  Y       L E   + G L+G   +   IA AAL+LASDD+ 
Sbjct:   223 VAPYGVATG-----MTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSV 277

Query:   270 YVSGHNLVVDGGFTSFK 286
             Y+SG NLVVDGGF+  K
Sbjct:   278 YISGQNLVVDGGFSVVK 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 112/259 (43%), Positives = 166/259 (64%)

Query:    30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACD 88
             ++L+ K+ +ITG ASGIG   A  F  +GAKVVI D+Q +LGQ  A  +G   A+F  CD
Sbjct:     4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query:    89 VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
             +T E++V +AV FT+ KH +LD++++NAGV  +   SI+DL+LE FD+ M +NVRG  A 
Sbjct:    64 ITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRGAAAF 122

Query:   149 IKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             IKH+ R M+   + G I+CT SVT  +GG   H+Y+ SK A++GLV+S    L +YGIR+
Sbjct:   123 IKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRV 182

Query:   208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
             N ++P+ + T          Y       + +   +T +L+G   +   +A+AAL+LASDD
Sbjct:   183 NGVAPYGVATGLTS------YNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDD 236

Query:   268 AKYVSGHNLVVDGGFTSFK 286
             + Y+SG NL VDGG++  K
Sbjct:   237 SVYISGQNLGVDGGYSVVK 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 113/265 (42%), Positives = 163/265 (61%)

Query:    26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPN-- 81
             S  S++L  KVALITG A+GIG++    F  +GAKV I D+Q  LG +  K L  G +  
Sbjct:    12 SLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKE 71

Query:    82 -ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMR 139
              A FI  DV  E D+S+AVDF +     LDI+ NNAG+ C  P   I + +L  F+    
Sbjct:    72 TAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGL-CGAPCPDIRNYSLSEFEMTFD 130

Query:   140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
             +NV+G    +KH+ RVMIP + G I+   SV G++GG+  H+Y  SK A++GL +S+AAE
Sbjct:   131 VNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAE 190

Query:   200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS-RLLELVYSTGVLEGTHCEPNDIAN 258
             L ++GIR+NC+SP+A+ T   +  + +     DA         +   L+G     +D+AN
Sbjct:   191 LGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVAN 250

Query:   259 AALYLASDDAKYVSGHNLVVDGGFT 283
             A L+LASDD++Y+SG NL++DGGFT
Sbjct:   251 AVLFLASDDSRYISGDNLMIDGGFT 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2078541 ATA1 "TAPETUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 107/265 (40%), Positives = 174/265 (65%)

Query:    25 LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
             ++   ++L EKVA+ITG A GIG ATA  F  NGA V++ADI    G   A+ +G    +
Sbjct:     1 MANSDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIG--GCY 58

Query:    85 IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
             + CDV+KE+DV  AV+  + +  +LD+M+NNAG++     SI+ +++++ ++++ +NV G
Sbjct:    59 VHCDVSKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEG-SIMGMDVDMVNKLVSVNVNG 117

Query:   145 VVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
             V+ GIKH+ + MI   R G I+CT+S +GL+GGL  H Y++SK AI G+V++ A EL  +
Sbjct:   118 VLHGIKHAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRTTACELGSH 177

Query:   204 GIRINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTG-VLEGTHCEPNDIANAA 260
             GIR+N ISP  +PT  ++    +   +  ++ + + +++   G +L G      D+A AA
Sbjct:   178 GIRVNSISPHGVPTDILVNAYRKFLNHDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAA 237

Query:   261 LYLASDDAK-YVSGHNLVVDGGFTS 284
             L+LAS ++  +++GHNLVVDGG+TS
Sbjct:   238 LFLASQESSGFITGHNLVVDGGYTS 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010584 "pollen exine formation" evidence=RCA

GO:0009908 "flower development" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3333	0.8080	0.9756	yes	no
Q8CQD2	BUTA_STAES	1, ., 1, ., 1, ., 3, 0, 4	0.3254	0.8249	0.9533	yes	no
Q8JZV9	BDH2_MOUSE	1, ., 1, ., 1, ., 3, 0	0.3228	0.8114	0.9836	yes	no
D4A1J4	BDH2_RAT	1, ., 1, ., 1, ., 3, 0	0.3385	0.8114	0.9836	yes	no
P42317	YXJF_BACSU	1, ., -, ., -, ., -	0.3333	0.8451	0.9766	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3215	0.8047	0.9637	yes	no
Q5HKG6	BUTA_STAEQ	1, ., 1, ., 1, ., 3, 0, 4	0.3228	0.8215	0.9494	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3444	0.8585	0.9695	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3294	0.8047	0.9637	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766
3rd Layer	1.3.1.56	LOW CONFIDENCE prediction!
4th Layer	1.1.1.101	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	297
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-100
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-84
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-72
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-67
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-64
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-62
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-61
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-59
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-58
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-56
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	7e-56
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-55
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-55
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-55
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-54
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-53
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-51
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-51
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-50
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-50
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-50
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	9e-49
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-48
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-47
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-46
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-45
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-45
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-44
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-44
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-44
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-44
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-44
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-44
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-44
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-44
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-44
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	6e-43
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-42
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-42
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-41
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-41
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-41
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-40
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-40
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	9e-40
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-39
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-39
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-39
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-38
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-38
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-38
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-38
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-38
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-37
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-37
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-37
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-37
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-37
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-37
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	5e-37
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-37
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	8e-37
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	9e-37
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-36
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-36
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-36
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-36
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-36
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	7e-36
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-36
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-36
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-35
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-35
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-35
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-35
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	9e-35
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-34
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-34
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-34
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-33
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-33
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-33
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-33
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-32
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	5e-32
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	6e-32
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	7e-32
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	9e-32
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-32
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-31
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-31
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	5e-31
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	6e-31
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	9e-31
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-30
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-30
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-30
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-30
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-29
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-29
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-29
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-29
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-29
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-29
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-29
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-29
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	6e-29
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	7e-29
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-29
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	8e-29
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-28
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-28
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-28
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-28
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	9e-28
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-27
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	8e-27
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-27
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	8e-27
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-26
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	4e-26
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	7e-26
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-25
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-25
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-25
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-25
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	6e-25
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-24
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-24
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-24
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-24
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	4e-24
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-23
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-23
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-23
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-23
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	6e-23
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-22
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-22
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-22
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-22
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-22
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-22
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	5e-22
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-21
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-21
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-21
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-21
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	7e-21
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	9e-21
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-20
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-20
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-20
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-20
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-20
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	7e-20
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-19
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-19
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-19
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-19
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-19
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	5e-19
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	6e-19
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-19
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	7e-19
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-19
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	9e-19
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-18
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-18
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-18
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-18
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-18
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	7e-18
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-17
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-17
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-17
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	5e-17
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	6e-17
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-17
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-16
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-16
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-16
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-16
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-16
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-16
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-15
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-15
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-15
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	7e-15
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-14
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	7e-14
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-13
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-13
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-13
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	6e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	7e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	7e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-12
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-12
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	4e-12
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-12
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-11
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-11
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-10
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-10
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-10
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-10
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-10
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	3e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	8e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-08
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-08
pfam08659	181	pfam08659, KR, KR domain	9e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-07
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	5e-07
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-07
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	1e-06
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	2e-06
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	2e-06
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	5e-06
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-06
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	9e-06
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-05
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	3e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	3e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-05
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	5e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	9e-05
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	1e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	6e-04
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	6e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	8e-04
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.002
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.002
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.003
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  292 bits (749), Expect = e-100
 Identities = 128/254 (50%), Positives = 170/254 (66%), Gaps = 6/254 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP-NATFIACDV 89
           +L+ KVA+ITG ASGIG+ATA  F  +GA+VVIADI    GQ  A ELG  + +F+ CDV
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E+DV  AVD  +++  +LDIM+NNAGV      SI++ +LE F++V+ +NV G   G 
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           KH+ RVMIP + G I+  ASV G++GGL  H Y+ SK A++GL +S A EL E+GIR+NC
Sbjct: 121 KHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNC 180

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           +SP+ + TP +         GV+   + E V     L+GT   P DIA A LYLASDD++
Sbjct: 181 VSPYGVATPLLTAGF-----GVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSR 235

Query: 270 YVSGHNLVVDGGFT 283
           YVSG NLVVDGG T
Sbjct: 236 YVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  253 bits (648), Expect = 6e-84
 Identities = 120/266 (45%), Positives = 166/266 (62%), Gaps = 3/266 (1%)

Query: 22  SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-- 79
           S   S  S++L  KVAL+TG A+GIG++    F  +GAKV I D+Q  LGQ     LG  
Sbjct: 6   SSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGE 65

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
           PN  F  CDVT E DVS AVDFT+ K   LDIM NNAG+       I ++ L  F++V  
Sbjct: 66  PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFD 125

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           +NV+GV  G+KH+ R+MIP + G I+   SV   +GGL  H Y+ SK A++GL +S+AAE
Sbjct: 126 VNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAE 185

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA-SRLLELVYSTGVLEGTHCEPNDIAN 258
           L ++GIR+NC+SP+A+PT   +  + +     DA +           L+G     +D+AN
Sbjct: 186 LGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVAN 245

Query: 259 AALYLASDDAKYVSGHNLVVDGGFTS 284
           A L+LASD+A+Y+SG NL++DGGFT 
Sbjct: 246 AVLFLASDEARYISGLNLMIDGGFTC 271

Length = 280

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  222 bits (567), Expect = 4e-72
 Identities = 93/258 (36%), Positives = 139/258 (53%), Gaps = 17/258 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDV 89
           LE KVA++TGA+SGIG+  A +F + GA+VV+ D   +  ++ A E+     A  +A DV
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV 62

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR--SIVDLNLEVFDQVMRINVRGVVA 147
           + E+DV  AV   + +   +DI+ NNAG    T R   ++D++   FD++  +NV+    
Sbjct: 63  SDEADVEAAVAAALERFGSVDILVNNAGT---THRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLL--GGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             + +   M     G I+  AS  GL    GL    Y+ SK A+I L K++AAEL    I
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLG--WYNASKGAVITLTKALAAELGPDKI 177

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N ++P  + T  +   M +      A + L      G L      P DIANAAL+LAS
Sbjct: 178 RVNAVAPVVVETGLLEAFMGEPTPENRA-KFLAT-IPLGRL----GTPEDIANAALFLAS 231

Query: 266 DDAKYVSGHNLVVDGGFT 283
           D+A +++G  LVVDGG  
Sbjct: 232 DEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  208 bits (532), Expect = 4e-67
 Identities = 85/245 (34%), Positives = 135/245 (55%), Gaps = 13/245 (5%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA--KELGPNATFIACDVTKESD 94
           AL+TGA+SGIG+A A +    GAKVV+AD   +   + A  + LG NA  +  DV+ E D
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V   V+  + +  +LDI+ NNAG+A   P  + +L  E +D+V+ +N+ GV    + +  
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIA--RPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            M  +  G I+  +SV GL     Q  Y+ SK+A+ GL +S+A EL  YGIR+N ++P  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 215 IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH 274
           + TP + +   +           E   +  +  G    P ++A A ++LASD+A Y++G 
Sbjct: 179 VDTPMLAKLGPE---------EAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQ 229

Query: 275 NLVVD 279
            + VD
Sbjct: 230 VIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  203 bits (518), Expect = 1e-64
 Identities = 96/261 (36%), Positives = 147/261 (56%), Gaps = 22/261 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIA 86
           KL  KVA++TGA+ GIG+A A      GAKVVIA DI  +  Q+  +E+   G +A  + 
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVK 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+ E DV + V+  + K  ++DI+ NNAG++      + D+  E +D+V+ +N+ GV+
Sbjct: 62  ADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS--NFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              +++   MI R+SG I+  +S+ GL+G   +  YS SK A+    K++A EL   GIR
Sbjct: 120 LLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIR 179

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC---EPNDIANAALYL 263
           +N ++P AI T     EM   ++  D   L E        E       +P +IA   L+L
Sbjct: 180 VNAVAPGAIDT-----EMWSSFSEEDKEGLAE--------EIPLGRLGKPEEIAKVVLFL 226

Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           ASDDA Y++G  + VDGG+T 
Sbjct: 227 ASDDASYITGQIITVDGGWTC 247

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  197 bits (504), Expect = 2e-62
 Identities = 83/259 (32%), Positives = 134/259 (51%), Gaps = 25/259 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L+ K AL+TGA+ GIG+A A +  ++GAKVVI D   +  +  A EL   G  A  +  
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+ E+ V   ++  +     LDI+ NNAG+       +  ++ E +D+V+ +N+ G   
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDAL--LPRMSEEDWDRVIDVNLTGTFN 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            ++ +   MI  R G I+  +SV+G+ G   Q  YS +K+ +IG  K++A EL   GI +
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITV 179

Query: 208 NCISPFAIPTPFVMEEMSQIY-----AGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           N ++P  I T  + E + +         +   RL           G    P ++ANA  +
Sbjct: 180 NAVAPGFIDTD-MTEGLPEEVKAEILKEIPLGRL-----------GQ---PEEVANAVAF 224

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD A Y++G  + V+GG
Sbjct: 225 LASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  195 bits (497), Expect = 1e-61
 Identities = 100/260 (38%), Positives = 148/260 (56%), Gaps = 11/260 (4%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFI 85
           S     KVAL+TG A+GIG+ATA  F   GAKVV+AD     G++T    +E G  A F+
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFV 61

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           ACDVT++++V   V+ TI+ + +LD  +NNAG+  +  R + + +   FD +M +NV+GV
Sbjct: 62  ACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGR-LAEGSEAEFDAIMGVNVKGV 120

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              +K+   +M+ +  G I+ TASV GL        Y+ SK A+IGL KS A E  + GI
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N + P  I T     +M +     D  R  E   +   + G   +  ++A+A LYL S
Sbjct: 181 RVNAVCPAVIDT-----DMFRRAYEAD-PRKAEFAAAMHPV-GRIGKVEEVASAVLYLCS 233

Query: 266 DDAKYVSGHNLVVDGGFTSF 285
           D A + +GH L+VDGG T+ 
Sbjct: 234 DGASFTTGHALMVDGGATAQ 253

Length = 253

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  189 bits (482), Expect = 3e-59
 Identities = 94/255 (36%), Positives = 134/255 (52%), Gaps = 13/255 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ KVA++TG A G+G A A   ++ GAKVV++DI  + GQ  A ELG  A F   DVT
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDVT 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E   +  VD       +LD++ NNAG+   T  ++    LE + +++ IN+ GV  G +
Sbjct: 62  DEDGWTAVVDTAREAFGRLDVLVNNAGIL--TGGTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRIN 208
                M     G I+  +S+ GL+G  A   Y+ SK A+ GL KS A E     YGIR+N
Sbjct: 120 AVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            + P  I TP     M+                      G   EP++IA A +YLASD++
Sbjct: 180 SVHPGYIYTP-----MTDELLIAQGEMGNY----PNTPMGRAGEPDEIAYAVVYLASDES 230

Query: 269 KYVSGHNLVVDGGFT 283
            +V+G  LVVDGG+T
Sbjct: 231 SFVTGSELVVDGGYT 245

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  186 bits (475), Expect = 3e-58
 Identities = 98/257 (38%), Positives = 143/257 (55%), Gaps = 19/257 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +LE KVA++TGA SG G+  A +F   GA+VVIADI     ++ A ++G  A  I  DVT
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVT 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           K +DV   V+  +SK  +LDI+ NNAG+  +  + +++++ E FD+V  +NV+ +    +
Sbjct: 62  KRADVEAMVEAALSKFGRLDILVNNAGITHR-NKPMLEVDEEEFDRVFAVNVKSIYLSAQ 120

Query: 151 HSTRVMIPRRSGCILCTASVTGL--LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
                M  +  G I+  AS  GL    GL    Y+ SK  ++   K+MA EL    IR+N
Sbjct: 121 ALVPHMEEQGGGVIINIASTAGLRPRPGLTW--YNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 209 CISPFAIPTP----FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           C+ P A  TP    F+ E+  +  A   A+  L          G    P+DIANAALYLA
Sbjct: 179 CLCPVAGETPLLSMFMGEDTPENRAKFRATIPL----------GRLSTPDDIANAALYLA 228

Query: 265 SDDAKYVSGHNLVVDGG 281
           SD+A +++G  L VDGG
Sbjct: 229 SDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  181 bits (462), Expect = 3e-56
 Identities = 91/261 (34%), Positives = 136/261 (52%), Gaps = 24/261 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIA 86
            LE KVAL+TGA+ GIG+A A +  + GA VVI     + G +        LG  A  + 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+    V  AVD   ++   +DI+ NNAG+       ++ +  E +D+V+  N+ GV 
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGIT--RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              K   R M+ +RSG I+  +SV GL+G   Q  Y+ SK+ +IG  KS+A EL   GI 
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGIT 179

Query: 207 INCISPFAIPT---PFVMEEMS-QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +N ++P  I T     + E++   I A +   RL       G       +P +IA+A  +
Sbjct: 180 VNAVAPGFIETDMTDALPEDVKEAILAQIPLGRL-------G-------QPEEIASAVAF 225

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LASD+A Y++G  L V+GG  
Sbjct: 226 LASDEAAYITGQTLHVNGGMV 246

Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  180 bits (460), Expect = 7e-56
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 15/259 (5%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI 85
           +R LE +VAL+TGAA GIG+A A +  ++GA+V++ DI       TA+ +   G  A   
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARAR 60

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV   + +  AV   +    +LDI+  NAG+   TP    +++ E +++V+ +N+ G 
Sbjct: 61  QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTP--FAEMDDEQWERVIDVNLTGT 118

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKSAIIGLVKSMAAELCEYG 204
               + +   +I    G I+ T+SV G   G      Y+ SK+ ++G  +++A EL    
Sbjct: 119 FLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARN 178

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           I +N + P  + TP +   +         +  + L            EP DIA A L+LA
Sbjct: 179 ITVNSVHPGGVDTP-MAGNLGDAQWAEAIAAAIPLGRLG--------EPEDIAAAVLFLA 229

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           SD+A+Y++G  L VDGG T
Sbjct: 230 SDEARYITGQTLPVDGGAT 248

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  178 bits (455), Expect = 4e-55
 Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 7/258 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L+ KVAL+TGAASGIG   A      GAKVVIAD+  +     A+ L   G  A  +A 
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT E  ++  +D+ +     +DI+ NNAG+    P  I D   E + +++ I + G   
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAP--IEDFPTEKWKKMIAIMLDGAFL 118

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             K +  +M  +  G I+  ASV GL+G   +  Y  +K  +IGL K +A E   +G+ +
Sbjct: 119 TTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178

Query: 208 NCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           N I P  + TP V +++  +    G+    +LE V    V +       +IA+ AL+LAS
Sbjct: 179 NAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS 238

Query: 266 DDAKYVSGHNLVVDGGFT 283
             AK V+G   VVDGG+T
Sbjct: 239 FAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  178 bits (453), Expect = 5e-55
 Identities = 92/250 (36%), Positives = 138/250 (55%), Gaps = 4/250 (1%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVA++TGA +GIG A AA+    GA+VV+ADI     Q    ++   A  +  DVT 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E  V+   +  + +   LD++ NNAG    TP +I+D +L V+DQ M IN+RG     +H
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLTP-AIIDTDLAVWDQTMAINLRGTFLCCRH 119

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   MI R  G I+  +S+ G  G      Y  SK+AI  L +++AAEL   GIR N ++
Sbjct: 120 AAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALA 179

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  I TP ++ +++     +       L++    L+G    P D+A A ++L SDDA ++
Sbjct: 180 PGLIDTPLLLAKLAGFEGALGPGGFHLLIHQ---LQGRLGRPEDVAAAVVFLLSDDASFI 236

Query: 272 SGHNLVVDGG 281
           +G  L VDGG
Sbjct: 237 TGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  178 bits (453), Expect = 8e-55
 Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 12/255 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----QQTAKELGPNATFIACDVT 90
           KVA+ITGAA GIG+A A +  ++G  +V+AD+  +       Q   E G NA  +  DVT
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVT 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            + DV   +D  + K    D+M NNAG+A  TP  ++ +  E   +V  +NV GV+ GI+
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITP--LLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 151 HSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
            + R        G I+  +S+ G+ G      YS SK A+ GL ++ A EL   GI +N 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 210 ISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
            +P  + T     + EE+ +I    +     E  +S+ +  G   EP D+A    +LAS+
Sbjct: 181 YAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAE--FSSSIPLGRLSEPEDVAGLVSFLASE 238

Query: 267 DAKYVSGHNLVVDGG 281
           D+ Y++G  ++VDGG
Sbjct: 239 DSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  177 bits (451), Expect = 1e-54
 Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 16/254 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKE---LGPNATFIAC 87
           L  +VAL+TGAA G+G+A A +    GA VV+      +  ++  +    LG  A  +  
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT ++ +  AV   + +  ++DI+ NNAG+     + + D++ + +D+V+ +N+ GV  
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIF--EDKPLADMSDDEWDEVIDVNLSGVFH 121

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            ++     M  +R G I+  +SV GL G   +  Y+ +K+ ++GL K++A EL EYGI +
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I T   M+E +   A                  G    P DIA A  +L SD 
Sbjct: 182 NMVAPGDIDTD--MKEATIEEA--------REAKDAETPLGRSGTPEDIARAVAFLCSDA 231

Query: 268 AKYVSGHNLVVDGG 281
           + Y++G  + V GG
Sbjct: 232 SDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  177 bits (450), Expect = 2e-54
 Identities = 85/261 (32%), Positives = 129/261 (49%), Gaps = 19/261 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL-----GPNATF 84
            L  KVAL+TGA+SGIG+A A      GA+VV+ A    +   +          G  A  
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 85  IACDVT-KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
           +A DV+  E  V   V     +  ++DI+ NNAG+A      + +L  E +D+V+ +N+ 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGP-DAPLEELTEEDWDRVIDVNLL 120

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G     + +  +M  +R   I+  +SV GL G   Q  Y+ SK+A+IGL K++A EL   
Sbjct: 121 GAFLLTRAALPLMKKQR---IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N ++P  I TP      S     +          +  +  G    P ++A A  +L
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKR-------LAARIPLGRLGTPEEVAAAVAFL 230

Query: 264 ASDD-AKYVSGHNLVVDGGFT 283
           ASD+ A Y++G  L VDGG  
Sbjct: 231 ASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  174 bits (444), Expect = 1e-53
 Identities = 91/254 (35%), Positives = 136/254 (53%), Gaps = 23/254 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTK 91
           KVAL+TGA+ GIG+A A +  + GAKV + D   +   +T    K LG NA  +  DV+ 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V   V+   ++   +DI+ NNAG+       ++ ++ E +D V+ +N+ GV    + 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDN--LLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R MI RRSG I+  +SV GL+G   Q  Y+ SK+ +IG  KS+A EL   GI +N ++
Sbjct: 119 VIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 212 PFAIPTPFVM---EEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T       E++  +I   +   RL           GT   P ++ANA  +LASDD
Sbjct: 179 PGFIDTDMTDALPEKVKEKILKQIPLGRL-----------GT---PEEVANAVAFLASDD 224

Query: 268 AKYVSGHNLVVDGG 281
           A Y++G  L V+GG
Sbjct: 225 ASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  169 bits (431), Expect = 1e-51
 Identities = 89/257 (34%), Positives = 133/257 (51%), Gaps = 32/257 (12%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKE 92
           AL+TGA+ GIG+A A K    GAKV+I      +  ++  +EL   G  A  + CDV+  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
            DV   V+    +   +DI+ NNAG+       ++ +  E +D V+  N+ GV    +  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 153 TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
            R+MI +RSG I+  +SV GL+G   Q  Y+ SK+ +IG  KS+A EL    I +N ++P
Sbjct: 119 LRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

Query: 213 FAIPTPF-------VMEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
             I T         V +++ SQI  G    R            GT   P ++ANA  +LA
Sbjct: 179 GFIDTDMTDKLSEKVKKKILSQIPLG----RF-----------GT---PEEVANAVAFLA 220

Query: 265 SDDAKYVSGHNLVVDGG 281
           SD+A Y++G  + VDGG
Sbjct: 221 SDEASYITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  169 bits (429), Expect = 3e-51
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 13/254 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L  KVA++TG ASGIG A A  F + GA+V + D    + +  A+ LG NA  + CDV+
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVS 71

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V  AV   IS   ++DI+ N+AGVA   P    D++ E +D+ + IN++G     +
Sbjct: 72  DSQSVEAAVAAVISAFGRIDILVNSAGVALLAP--AEDVSEEDWDKTIDINLKGSFLMAQ 129

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R MI    G I+  AS  G++  L +H  Y  SK+ ++G+ K +A E   YGI +N 
Sbjct: 130 AVGRHMIAAGGGKIVNLASQAGVV-ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNA 188

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ISP  + T    E   + +AG    R  +L+ +     G    P +IA AAL+LASD A 
Sbjct: 189 ISPTVVLT----ELGKKAWAGEKGERAKKLIPA-----GRFAYPEEIAAAALFLASDAAA 239

Query: 270 YVSGHNLVVDGGFT 283
            ++G NLV+DGG+T
Sbjct: 240 MITGENLVIDGGYT 253

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  167 bits (425), Expect = 1e-50
 Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 10/256 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACD 88
           +L  +VA++TGA SGIG+ATA  F   GA+VV+AD   +  ++ A  +  G  A     D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V     V   VDF  ++  +LD++ NNAG  C    ++V  +   +D VMR+NV GV   
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG--TVVTTDEADWDAVMRVNVGGVFLW 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            K++  +M  +  G I+ TAS   L GG  +  Y  SK AI  L ++MA +    GIR+N
Sbjct: 120 AKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASR-LLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            ++P  I TP+     ++ +A  +A R  L   +             ++A AAL+LASD+
Sbjct: 180 AVAPGTIDTPYFRRIFAR-HADPEALREALRARHPMNRFG----TAEEVAQAALFLASDE 234

Query: 268 AKYVSGHNLVVDGGFT 283
           + + +G  LVVDGG+ 
Sbjct: 235 SSFATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  167 bits (424), Expect = 2e-50
 Identities = 89/267 (33%), Positives = 142/267 (53%), Gaps = 30/267 (11%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
            +L+ KVAL+TGAASGIG+A A ++++ GA+VVIADI+    +  A E+GP A  ++ DV
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T++  +   V   + +   +DI++NNA +       I+D++ + +D++  +NV+G+   +
Sbjct: 62  TRQDSIDRIVAAAVERFGGIDILFNNAALF--DMAPILDISRDSYDRLFAVNVKGLFFLM 119

Query: 150 KHSTRVMIPR-RSGCILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           +   R M+ + R G I+  AS  G  G  L  H Y  +K+A+I   +S A  L  +GI +
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSH-YCATKAAVISYTQSAALALIRHGINV 178

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDA-------------SRLLELVYSTGVLEGTHCEPN 254
           N I+P  + TP        ++  VDA              RL+       V  G    P+
Sbjct: 179 NAIAPGVVDTP--------MWDQVDALFARYENRPPGEKKRLV----GEAVPLGRMGVPD 226

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           D+   AL+LAS DA Y+      VDGG
Sbjct: 227 DLTGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  165 bits (420), Expect = 6e-50
 Identities = 84/258 (32%), Positives = 137/258 (53%), Gaps = 12/258 (4%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S++L  +VA+ITG  SGIG ATA +  + GA VV+ DI  + G+  A E+G    F+  D
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTD 59

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E  V+   D     +  +DI +NNAG++     SI++  L+ + +V  +N+  V   
Sbjct: 60  VTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLC 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            K +   M+ +  G I+ TAS   ++G   +Q +Y+ SK  ++ + + +  +    GIR+
Sbjct: 120 CKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRV 179

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLL-ELVYSTGVLEGTHCEPNDIANAALYLASD 266
           N + P  + TP + E  ++     D  R    LV+   V  G   EP +IA A  +LASD
Sbjct: 180 NALCPGPVNTPLLQELFAK-----DPERAARRLVH---VPMGRFAEPEEIAAAVAFLASD 231

Query: 267 DAKYVSGHNLVVDGGFTS 284
           DA +++    +VDGG + 
Sbjct: 232 DASFITASTFLVDGGISG 249

Length = 255

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  162 bits (412), Expect = 9e-49
 Identities = 92/254 (36%), Positives = 137/254 (53%), Gaps = 11/254 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           KVAL+TG A GIGK  A +   +G  V +AD+  +  ++TAKE+   G  A     DV+ 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           +  V  A+D    K    D+M NNAGVA  TP  I+++  E   +V  +NV+GV+ GI+ 
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITP--ILEITEEELKKVYNVNVKGVLFGIQA 118

Query: 152 STRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           + R    +   G I+  AS+ G  G      YS +K A+ GL ++ A EL   GI +N  
Sbjct: 119 AARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAY 178

Query: 211 SPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            P  + TP    + EE S+I AG       E  +S+ +  G   EP D+A    +LAS+D
Sbjct: 179 CPGIVKTPMWEEIDEETSEI-AGKPIGEGFE-EFSSEIALGRPSEPEDVAGLVSFLASED 236

Query: 268 AKYVSGHNLVVDGG 281
           + Y++G +++VDGG
Sbjct: 237 SDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  162 bits (411), Expect = 1e-48
 Identities = 87/258 (33%), Positives = 132/258 (51%), Gaps = 17/258 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIA 86
           L+ KVAL+TGA+SGIGKA A +  + GA VV+      D   ++ ++  K +G  A  + 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEE-IKAVGGKAIAVQ 59

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+KE DV       I +   LDI+ NNAG+  +   S  ++ LE +++V+ +N+ G  
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGL--QGDASSHEMTLEDWNKVIDVNLTGQF 117

Query: 147 AGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              + + +     +  G I+  +SV   +       Y+ SK  +  + K++A E    GI
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGI 177

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N I+P AI TP   E         D   L+ +        G   EP +IA AA +LAS
Sbjct: 178 RVNAIAPGAINTPINAEAWDDPEQRADLLSLIPM--------GRIGEPEEIAAAAAWLAS 229

Query: 266 DDAKYVSGHNLVVDGGFT 283
           D+A YV+G  L VDGG T
Sbjct: 230 DEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  159 bits (403), Expect = 2e-47
 Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 30/266 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATF--IA 86
            ++KV LITG  SG+G ATA +    GAK+ + D+  +     +    E+ P+A    I 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+ E+ V   VD T+ +  ++D  +NNAG+  K      D   + FD+V+ IN+RGV 
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQ-NLTEDFGADEFDKVVSINLRGVF 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            G++   +VM  + SG I+ TASV G+ G   Q  Y+ +K  ++GL ++ A E  +YGIR
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIR 179

Query: 207 INCISPFAIPTPFVMEEMSQI-----------YAGVDASRLLELVYSTGVLEGTHCEPND 255
           IN I+P AI TP V   + Q+           +  V+  +                EP +
Sbjct: 180 INAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFG-------------EPEE 226

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +A    +L SDDA YV+   + +DGG
Sbjct: 227 VAAVVAFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  157 bits (398), Expect = 1e-46
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 8/253 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKES 93
              L+TG ASGIG+A A  F   GA+V + D+       TA  L G   T    DV   +
Sbjct: 12  LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPA 71

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            V    D  + +   LD++ NNAG+A  T   I ++  E ++Q + +N+ G     + + 
Sbjct: 72  QVERVFDTAVERFGGLDVLVNNAGIAGPTGG-IDEITPEQWEQTLAVNLNGQFYFARAAV 130

Query: 154 RVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
            ++     G  I+  +SV G LG   +  Y+ SK A++GLVKS+A EL   GIR+N I P
Sbjct: 131 PLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILP 190

Query: 213 FAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
             +  P  M  + +  A   G+    + +  Y   +  G   EP DIA  AL+LAS  A+
Sbjct: 191 GIVRGP-RMRRVIEARAQQLGIGLDEMEQ-EYLEKISLGRMVEPEDIAATALFLASPAAR 248

Query: 270 YVSGHNLVVDGGF 282
           Y++G  + VDG  
Sbjct: 249 YITGQAISVDGNV 261

Length = 264

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  154 bits (390), Expect = 1e-45
 Identities = 88/250 (35%), Positives = 132/250 (52%), Gaps = 5/250 (2%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE--LGPNATFIACDVTKE 92
           KVAL+TG ASGIG A A +  + GA VV+ADI  ++ ++ A+    GP A  + CDVT E
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTSE 61

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
           + V  A +  + +   LDI+ +NAG+A  T   I + +LE +++ M IN+ G     + +
Sbjct: 62  AQVQSAFEQAVLEFGGLDIVVSNAGIA--TSSPIAETSLEDWNRSMDINLTGHFLVSREA 119

Query: 153 TRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            R+M  +   G I+  AS   +  G     YS +K+A   L + +A E  E GIR+N ++
Sbjct: 120 FRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVN 179

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P A+     + E     A   A  LLE  Y T  L      P D+A A + +AS+D    
Sbjct: 180 PDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFGKT 239

Query: 272 SGHNLVVDGG 281
           +G  + VDGG
Sbjct: 240 TGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  159 bits (404), Expect = 4e-45
 Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 10/258 (3%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
            K + +V L+TGAA GIG+A   +F   G +VV+AD   +  ++ A  LGP+   +A DV
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDV 60

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           + E+ + +  +    +  ++D++ NNAGV   T  + +D  LE F ++  IN+ G     
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 150 KHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + + R+MI       I+  AS  GL+    +  YS SK+A+I L +S+A E    GIR+N
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180

Query: 209 CISPFAIPTPFVMEEMSQIYAG-VDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            + P  + T  V E      AG +D S +        +  G    P +IA A  +LASD 
Sbjct: 181 AVLPGYVRTQMVAE---LERAGKLDPSAVRS-----RIPLGRLGRPEEIAEAVFFLASDQ 232

Query: 268 AKYVSGHNLVVDGGFTSF 285
           A Y++G  LVVDGG+T +
Sbjct: 233 ASYITGSTLVVDGGWTVY 250

Length = 520

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  151 bits (384), Expect = 1e-44
 Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 24/263 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            L+ KVA++TG + GIG A A      GA V I        ++ A+EL    G       
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV+ +  V            ++DI+  NAG+     +  +D   E +++V+ +N+ GV 
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGIT--VHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAELCEYG 204
              + + ++   +  G ++ TAS++G +    Q    Y+ SK+A+I L KS+A E  +Y 
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 205 IRINCISPFAIPTP---FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           IR+N ISP  I T    FV +E+ + +              + +       P ++  A L
Sbjct: 183 IRVNSISPGYIDTDLTDFVDKELRKKWE-------------SYIPLKRIALPEELVGAYL 229

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           YLASD + Y +G +L++DGG+T 
Sbjct: 230 YLASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 1e-44
 Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 14/254 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K AL+TGAA G+G A A      GA V   D      ++ A  L   G  A  IA D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +   + V    D   +    LD + NNAG+     +S  +L+++ +D VM +NVRG    
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGIT--NSKSATELDIDTWDAVMNVNVRGTFLM 122

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           ++ +   +     G I+  AS T L G      Y  SK A+IG+ +S+A EL   GI +N
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I+P    T           A V A            LE     P+D+A A L+L SD A
Sbjct: 183 AIAPGLTATEA--------TAYVPADERHAYYLKGRALER-LQVPDDVAGAVLFLLSDAA 233

Query: 269 KYVSGHNLVVDGGF 282
           ++V+G  L V+GGF
Sbjct: 234 RFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 1e-44
 Identities = 86/259 (33%), Positives = 132/259 (50%), Gaps = 17/259 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAK---ELGPNATFIA 86
            L+ +VA +TGA SGIG+  A      GA V + D++   G  +TA+     G  A  IA
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVT ++D+  AV  T ++   L +  N AG+A   P    ++  E +  VM IN+ GV 
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAE--EMEEEQWQTVMDINLTGVF 122

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLL--GGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
              +   R M+    G I+  AS++G++   GL Q  Y+ SK+ +I L KS+A E    G
Sbjct: 123 LSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRG 182

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+N ISP    TP  M    ++   V  ++L E       +       +++   A++L 
Sbjct: 183 IRVNSISPGYTATP--MNTRPEM---VHQTKLFEEQTPMQRMAK----VDEMVGPAVFLL 233

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           SD A + +G +L+VDGGF 
Sbjct: 234 SDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  151 bits (384), Expect = 1e-44
 Identities = 80/257 (31%), Positives = 129/257 (50%), Gaps = 15/257 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG---QQTAKELGPNATFIACD 88
           L+ KVAL+TGA+ GIG   A+     GA +VI     +     QQ  ++ G  AT   CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+ E  +  AV+       ++DI+ NNAG+  +   +  +     +  V+ +N+ GV   
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGI-IRRHPAE-EFPEAEWRDVIDVNLNGVFFV 120

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +   R MI +  G I+   S+   LGG     Y+ SK  + GL K++A E   +GI++N
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 209 CISPFAIPTPFVMEEMSQ-IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            I+P    T     EM++ + A  D     +++       G   +P D+  AA++LASD 
Sbjct: 181 AIAPGYFAT-----EMTEAVVA--DPEFNDDILKRIPA--GRWGQPEDLVGAAVFLASDA 231

Query: 268 AKYVSGHNLVVDGGFTS 284
           + YV+G  + VDGG+ +
Sbjct: 232 SDYVNGQIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  160 bits (406), Expect = 2e-44
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 13/259 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDV 89
           L  KVAL+TGAA GIGKATA +  + GA VV+AD+  +  +  A ELG    A  +ACDV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E+ V  A +        +DI+ +NAG+A      I + + E + +   +N  G     
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGIA--ISGPIEETSDEDWRRSFDVNATGHFLVA 537

Query: 150 KHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + + R+M  +  G  I+  AS   +  G     Y  +K+A + LV+ +A EL   GIR+N
Sbjct: 538 REAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVN 597

Query: 209 CISPFA------IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            ++P A      I T   +E  +  Y G+    L E  Y    L      P D+A A ++
Sbjct: 598 GVNPDAVVRGSGIWTGEWIEARAAAY-GLSEEELEEF-YRARNLLKREVTPEDVAEAVVF 655

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LAS      +G  + VDGG
Sbjct: 656 LASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  151 bits (382), Expect = 3e-44
 Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 18/263 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           +LE KVA+ITGA++GIG+A+A      GA V+  DI   +  +T  ++   G  A     
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAV-SETVDKIKSNGGKAKAYHV 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D++ E  V D       +  ++D+++NNAGV     R I +  ++VFD++M +++RG   
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGR-IHEYPVDVFDKIMAVDMRGTFL 120

Query: 148 GIKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                T++++P    + G I+ T+S +G    L +  Y+ +K A+I   KS+A E    G
Sbjct: 121 ----MTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDG 176

Query: 205 IRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           IR N I+P  I TP V  +   S+  AG       + +   G L G    P ++A   ++
Sbjct: 177 IRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRL-GK---PEEVAKLVVF 232

Query: 263 LASDDAKYVSGHNLVVDGGFTSF 285
           LASDD+ +++G  + +DGG  ++
Sbjct: 233 LASDDSSFITGETIRIDGGVMAY 255

Length = 272

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  150 bits (382), Expect = 3e-44
 Identities = 91/261 (34%), Positives = 132/261 (50%), Gaps = 20/261 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTA--KELGPNATFIAC 87
            L  K AL+TG + G+G   A      GA+VV+ A    +L +  A  + LG +A +IA 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAA 68

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV  E+D+    + T+ +   +DI+ NNAG     P    D  +E +D+VM +NVRG+  
Sbjct: 69  DVADEADIERLAEETLERFGHVDILVNNAGATWGAP--AEDHPVEAWDKVMNLNVRGLFL 126

Query: 148 GIKHSTRV-MIPRRSGCILCTASVTGLLGGLAQHT----YSVSKSAIIGLVKSMAAELCE 202
             +   +  MIPR  G I+  ASV GL G   +      Y+ SK A+I   +++AAE   
Sbjct: 127 LSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGP 186

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +GIR+N I+P   PT   M   +    G D      L    G L        D+  AAL 
Sbjct: 187 HGIRVNAIAPGFFPTK--MTRGTLERLGEDLLAHTPL----GRLGD----DEDLKGAALL 236

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LASD +K+++G  L VDGG +
Sbjct: 237 LASDASKHITGQILAVDGGVS 257

Length = 259

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  150 bits (380), Expect = 3e-44
 Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 21/242 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTK 91
           KVA+ITG ASGIG ATA   +  GAKV I D     G             ATF+ CDVT 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG--- 148
              ++ A    I K  ++DI+ NNAG+  +            +++ + +N+ GV+     
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL-CEYGIRI 207
             H        + G I+   SV GL        YS SK  ++G  +S+A  L  + G+R+
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I P    TP + + +++           E++ S          P  +A A +YL  DD
Sbjct: 181 NAICPGFTNTPLLPDLVAK---------EAEMLPSAPTQ-----SPEVVAKAIVYLIEDD 226

Query: 268 AK 269
            K
Sbjct: 227 EK 228

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  150 bits (380), Expect = 6e-44
 Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 9/255 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK---ELGPNATFIACDVTK 91
           K AL+TGAASGIG A A    + GA VV+ D   +  +  AK   + G +  ++  DVTK
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTK 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E +++D +    ++   LDI+ NNAG+    P  I +   E +D+++ + +      I+ 
Sbjct: 62  EDEIADMIAAAAAEFGGLDILVNNAGIQHVAP--IEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   M  +  G I+  AS  GL+    +  Y  +K  +IGL K +A E+ E+GI +N I 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 212 PFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
           P  + TP V   + + ++   G+   +++  V   G         +++A  ALYLASD A
Sbjct: 180 PGYVRTPLVEKQIADQAKTR-GIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAA 238

Query: 269 KYVSGHNLVVDGGFT 283
             ++G  +V+DGG+T
Sbjct: 239 AQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  148 bits (374), Expect = 3e-43
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 6/253 (2%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L+ K ALITG+A GIG+A A  ++  GA+V IADI  +  + TA E+GP A  I+ DVT 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           ++ +   V   + +   +DI+ NNA +    P  IVD+  E +D++  INV G +  ++ 
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNAALFDLAP--IVDITRESYDRLFAINVSGTLFMMQA 118

Query: 152 STRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             R MI + R G I+  AS  G  G      Y  +K+A+I L +S    L  +GI +N I
Sbjct: 119 VARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 178

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG--VLEGTHCEPNDIANAALYLASDDA 268
           +P  +      + +   +A  +     E     G  V  G      D+   A++LAS DA
Sbjct: 179 APGVVDGEH-WDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLASTDA 237

Query: 269 KYVSGHNLVVDGG 281
            Y+      VDGG
Sbjct: 238 DYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  147 bits (373), Expect = 6e-43
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 19/259 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFI 85
           L  KVA+ITG++SGIG  TA  F   GA++ +     +  ++T +              +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D+T+E      +  T++K  +LDI+ NNAG          D ++E +D+VM +N+R V
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAG--ILAKGGGEDQDIEEYDKVMNLNLRAV 118

Query: 146 VAGIKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           +    + T++ +P   +  G I+  +SV G         Y +SK+A+    +  A EL  
Sbjct: 119 I----YLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAP 174

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            G+R+N +SP  I T F    M          + L     T  L G     +++A A  +
Sbjct: 175 KGVRVNSVSPGVIVTGF-HRRMGMPEE--QYIKFLSRAKETHPL-GRPGTVDEVAEAIAF 230

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD + +++G  L VDGG
Sbjct: 231 LASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  144 bits (366), Expect = 3e-42
 Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 13/250 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           KVALIT AA GIG+A A  F   GA V+  DI  +  ++  +  GP  T    DVT +  
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER--GPGITTRVLDVTDK-- 58

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
             + V     +  ++D+++N AG       SI+D   + +D  M +NVR +   IK    
Sbjct: 59  --EQVAALAKEEGRIDVLFNCAGFVHHG--SILDCEDDDWDFAMNLNVRSMYLMIKAVLP 114

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
            M+ R+ G I+  +SV   + G+     YS +K+A+IGL KS+AA+  + GIR N I P 
Sbjct: 115 KMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPG 174

Query: 214 AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG 273
            + TP + E +       +A +        G L      P ++A  A+YLASD++ YV+G
Sbjct: 175 TVDTPSLEERIQAQPDPEEALKAFAARQPLGRL----ATPEEVAALAVYLASDESAYVTG 230

Query: 274 HNLVVDGGFT 283
             +V+DGG++
Sbjct: 231 TAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  145 bits (367), Expect = 5e-42
 Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 23/259 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTA--KELGPNATFIACD 88
           L  KVA+ITGA+SGIG+A A  F   GAKVV+ A  Q +L Q  A  +  G  A  +A D
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V  E+     V   + +   LDI +NNAG        + +++LE + + +  N+     G
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTL-GEMGPVAEMSLEGWRETLATNLTSAFLG 122

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRI 207
            KH    M+ R  G ++ T++  G   G      Y+ SK+ +IGL + +AAE    GIR+
Sbjct: 123 AKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRV 182

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-----EPNDIANAALY 262
           N + P    TP     M +       +           + G H      +P +IA AAL+
Sbjct: 183 NALLPGGTDTP-----MGRAMGDTPEAL--------AFVAGLHALKRMAQPEEIAQAALF 229

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD A +V+G  L+VDGG
Sbjct: 230 LASDAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  143 bits (363), Expect = 2e-41
 Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 26/261 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNATF 84
           L+ +  LITG + G+G+A A +  ++GA V++ DI    G+  A  +       G  A  
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +A DV   +    A+D  + +  +LDI+ NNAG+A  T  +  +L++E +D V+ +N+ G
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIA--TDAAFAELSIEEWDDVIDVNLDG 121

Query: 145 VVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                + +   MI  RR G I+  ASV G+ G   Q  Y+ SK+ +IGL K++A EL   
Sbjct: 122 FFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPR 181

Query: 204 GIRINCISPFAIPTPFVMEEM--SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           GI +N ++P AI TP          +   V   RL               EP+++A    
Sbjct: 182 GITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLG--------------EPDEVAALVA 227

Query: 262 YLASDDAKYVSGHNLVVDGGF 282
           +L SD A YV+G  + VDGGF
Sbjct: 228 FLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  142 bits (359), Expect = 5e-41
 Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 14/256 (5%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF-IAC 87
           S + + KVALITG   GIG+A A  F+  GAKV +    +   +  AKEL     F I C
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAV---LYNSAENEAKELREKGVFTIKC 58

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV     V  + +    +  ++D++ NNAG+    P    + + E ++++++IN+ G + 
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFE--EFDEEKYNKMIKINLNGAIY 116

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCEYGI 205
                  ++   ++G I+  AS  G+ G  A+ T  Y+++K+ II L + +A EL +YGI
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIASNAGI-GTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N ++P  + T   +   SQ     +A +L EL  +  VL+ T  +P DIAN  L+LAS
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQ----EEAEKLRELFRNKTVLKTTG-KPEDIANIVLFLAS 230

Query: 266 DDAKYVSGHNLVVDGG 281
           DDA+Y++G  +V DGG
Sbjct: 231 DDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  142 bits (359), Expect = 5e-41
 Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 15/253 (5%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GPNATFIAC-DVT 90
           A ITGAA G+G+A A +    GAKV + DI    G    A E+    G    F A  DVT
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E+     +         L ++ NNAGV       I  + L+ + +VM INV  +  G K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGA--IEQIELDEWRRVMAINVESIFLGCK 119

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC--EYGIRIN 208
           H+   +   +   I+  +SV           Y+ SK+A+  L KS+A +       +R N
Sbjct: 120 HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I P  I T  +++ + Q     +A+R L    + GV  G   EP+D+A+A LYLASD++
Sbjct: 180 SIHPTFIRTG-IVDPIFQRLGEEEATRKL----ARGVPLGRLGEPDDVAHAVLYLASDES 234

Query: 269 KYVSGHNLVVDGG 281
           ++V+G  LV+DGG
Sbjct: 235 RFVTGAELVIDGG 247

Length = 251

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  139 bits (351), Expect = 6e-40
 Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 13/249 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           KVA++TG   GIGK     F+  G KVV ADI  + G   A+  GPN  F+  DV  E+ 
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETL 61

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V   V   + K  ++D++ NNA     +   +  L LE +D+++ +N+ G     ++   
Sbjct: 62  VKFVVYAMLEKLGRIDVLVNNAARG--SKGILSSLLLEEWDRILSVNLTGPYELSRYCRD 119

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            +I +  G I+  AS            Y+ SK  ++ L  ++A  L    IR+NCISP  
Sbjct: 120 ELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPGW 177

Query: 215 IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH 274
           I T    E  +      D ++            G    P DIAN  L+L   DA +++G 
Sbjct: 178 INTTEQQEFTAAPLTQEDHAQ---------HPAGRVGTPKDIANLVLFLCQQDAGFITGE 228

Query: 275 NLVVDGGFT 283
             +VDGG T
Sbjct: 229 TFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  139 bits (352), Expect = 9e-40
 Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 23/268 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------------QQTAK-- 76
           LE KVA ITGAA G G+A A +  + GA ++  D+   L               +TA+  
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 77  -ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
             LG        DV   ++V   V+  + +  +LD++  NAGV         +L+ E +D
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGR--SWELSEEQWD 118

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
            V+ IN+ GV    K     MI R +G  I+ T+SV GL        Y+ +K  ++GL K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
           ++A EL EYGIR+N I P+++ TP +  E M + +            +   +       P
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFL---KYPEAARAFMPALPVSGFVPP 235

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGG 281
            D+A+A L+LASD+++Y++GH L VD G
Sbjct: 236 EDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  138 bits (351), Expect = 9e-40
 Identities = 89/259 (34%), Positives = 128/259 (49%), Gaps = 22/259 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L+ KVA ITG  +GIGKA A  F   GA V IA  + ++ +  A+E+    G  A  I C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV-- 145
           DV     V  AVD T+ +  ++DI+ NNA      P     L+   F  V+ I++ G   
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAP--AESLSPNGFKTVIDIDLNGTFN 118

Query: 146 ---VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                G     R++  +  G IL  ++     G   Q   + +K+ +  L +S+A E   
Sbjct: 119 TTKAVGK----RLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGP 174

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           YGIR+N I+P  IPT   ME +    +G    +++E      V  G    P +IAN AL+
Sbjct: 175 YGIRVNAIAPGPIPTTEGMERL--APSGKSEKKMIE-----RVPLGRLGTPEEIANLALF 227

Query: 263 LASDDAKYVSGHNLVVDGG 281
           L SD A Y++G  LVVDGG
Sbjct: 228 LLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  139 bits (352), Expect = 1e-39
 Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 22/266 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L+ K+ ++TG +SGIG A   + ++NGA VV ADI              N  F+  DV+ 
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH------GGDGQHENYQFVPTDVSS 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD---------LNLEVFDQVMRINV 142
             +V+  V   I K  ++D + NNAG+    PR +VD         LN   FD++  IN 
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLVNNAGI--NIPRLLVDEKDPAGKYELNEAAFDKMFNINQ 118

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           +GV    +   R M+ +  G I+  +S  GL G   Q  Y+ +K+A+    +S A EL +
Sbjct: 119 KGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGK 178

Query: 203 YGIRINCISPFAI-PTPFVMEEMSQIYA---GVDASRLLELVYSTGVLE-GTHCEPNDIA 257
           + IR+  ++P  +  T     E  +  A   G+   +L      T  +  G   + +++A
Sbjct: 179 HNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVA 238

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFT 283
           +   YL SD A Y++G    + GG T
Sbjct: 239 DLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  139 bits (352), Expect = 2e-39
 Identities = 87/265 (32%), Positives = 135/265 (50%), Gaps = 32/265 (12%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATF 84
           S KL+ KVALITG  SGIG+A A  F   GA + I  + +H+   +T + +   G     
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLL 100

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR-SIVDLNLEVFDQVMRINVR 143
           I  DV+ E+   DAV+ T+ +  +LDI+ NNA  A + P+ S+ D+  E  D+  + N+ 
Sbjct: 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNA--AFQYPQQSLEDITAEQLDKTFKTNIY 158

Query: 144 GVVAGIKHSTRVMIP--RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                  H T+  +P  ++   I+ T S+TG  G      YS +K AI    +S+A  L 
Sbjct: 159 SYF----HMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV 214

Query: 202 EYGIRINCISPFAIPTP-----FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           + GIR+N ++P  I TP     F  E++SQ  +     R                +P ++
Sbjct: 215 QKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQR--------------PGQPEEL 260

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A A ++LAS D+ Y++G  L V+GG
Sbjct: 261 APAYVFLASPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  137 bits (347), Expect = 4e-39
 Identities = 88/257 (34%), Positives = 142/257 (55%), Gaps = 9/257 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           KL  K ALITGA  GIG+  A  F  +GA +++ DI  ++ ++ A EL   G   T +  
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV   + V+ A+     K  ++DI+ NNAGV C+   S +D++ E  D  + IN++GV  
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGV-CRLG-SFLDMSDEDRDFHIDINIKGVWN 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTG-LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             K     MI R+ G I+  +SVTG ++    +  Y+++K+AI+GL KS+A E  + GIR
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P  + TP   E +++     D   +L  + +  +      +P ++   A +LASD
Sbjct: 180 VNAICPGYVRTPMA-ESIARQSNPEDPESVLTEM-AKAIPLRRLADPLEVGELAAFLASD 237

Query: 267 DAKYVSGHNLVVDGGFT 283
           ++ Y++G   V+DGG T
Sbjct: 238 ESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 1e-38
 Identities = 83/253 (32%), Positives = 119/253 (47%), Gaps = 21/253 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K  L+TGA+SGIG+A A      GA+VV A          A  L   A    C+  +  D
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRL-D 61

Query: 95  VSD--AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
           V D  A+   ++     D + N AG+A  +  S +D+  E FD+VM +N RG     +H 
Sbjct: 62  VGDDAAIRAALAAAGAFDGLVNCAGIA--SLESALDMTAEGFDRVMAVNARGAALVARHV 119

Query: 153 TRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            R MI   R G I+  +S   L+G      Y  SK+A+  + + +  EL  +GIR+N ++
Sbjct: 120 ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVN 179

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P    TP   E  S           + L        G   E +D+A   L+L SD A  V
Sbjct: 180 PTVTLTPMAAEAWSDPQKSGPMLAAIPL--------GRFAEVDDVAAPILFLLSDAASMV 231

Query: 272 SGHNLVVDGGFTS 284
           SG +L VDGG+T+
Sbjct: 232 SGVSLPVDGGYTA 244

Length = 245

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  136 bits (343), Expect = 1e-38
 Identities = 86/253 (33%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           KVAL+TGA  GIG A A + + +G KV I D   +  Q  A +L   G  A  +  DV+ 
Sbjct: 3   KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD 62

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  AV   +     L+++ NNAGVA  TP  I  +  E FD+V  INV GV+ GI+ 
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTP--IETITEEQFDKVYNINVGGVIWGIQA 120

Query: 152 STRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           +          G I+   S  G++G      YS +K A+ GL ++ A +L   GI +N  
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAY 180

Query: 211 SPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
           +P  + TP + +   Q+   AG      +E  ++  +  G   EP D+AN   +LA  D+
Sbjct: 181 APGIVKTPMMFDIAHQVGENAGKPDEWGME-QFAKDITLGRLSEPEDVANCVSFLAGPDS 239

Query: 269 KYVSGHNLVVDGG 281
            Y++G  ++VDGG
Sbjct: 240 DYITGQTIIVDGG 252

Length = 256

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  135 bits (341), Expect = 2e-38
 Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 37/261 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +   K  LITGAASGIG A A  F++ GA+V   D Q +       +L  N  F+     
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNFHFL----- 50

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
            + D+SD ++        +DI+ N AG+    K    ++D +LE +  +   N+      
Sbjct: 51  -QLDLSDDLEPLFDWVPSVDILCNTAGILDDYKP---LLDTSLEEWQHIFDTNLTSTFLL 106

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +     M+ R+SG I+   S+   + G     Y+ SK A+ G  K +A +  + GI++ 
Sbjct: 107 TRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVF 166

Query: 209 CISPFAIPTP-----FVMEEMSQIYAG-VDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            I+P A+ TP     F    ++   A      R                EP ++A   L+
Sbjct: 167 GIAPGAVKTPMTAADFEPGGLADWVARETPIKRWA--------------EPEEVAELTLF 212

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LAS  A Y+ G  + +DGG+T
Sbjct: 213 LASGKADYMQGTIVPIDGGWT 233

Length = 235

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  135 bits (343), Expect = 2e-38
 Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 17/258 (6%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQQTAKEL---GPNAT 83
           S KL+ K ALITG  SGIG+A A  F   GA V I     +    ++T K +   G    
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I  D+  ES   D V   + +  +LDI+ NNA        SI D+  E  ++  R N+ 
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQ-HPQESIEDITTEQLEKTFRTNIF 139

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
            +    K +   +  ++   I+ T SVT   G      Y+ +K AI+   + ++ +L E 
Sbjct: 140 SMFYLTKAALPHL--KKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N ++P  I TP +     +              + + V  G   +P ++A A ++L
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSFPEEKVS---------EFGSQVPMGRAGQPAEVAPAYVFL 248

Query: 264 ASDDAKYVSGHNLVVDGG 281
           AS D+ YV+G  L V+GG
Sbjct: 249 ASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 4e-38
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 17/259 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFI 85
           +L  KVAL+TGAA GIG A A  F   GA V +AD+   L ++ A  +     G     +
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRSIVDLNLEVFDQVMRINVRG 144
             DVT  + V+ AV         LD++ NNAG+     P ++ D   E + +   +++ G
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTD---EDWRRCFAVDLDG 120

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCE 202
              G +     M+ R  G I+  AS       +      Y V+K  ++GL +++  E   
Sbjct: 121 AWNGCRAVLPGMVERGRGSIVNIASTHAF--KIIPGCFPYPVAKHGLLGLTRALGIEYAA 178

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             +R+N I+P  I T    E+         A+R   L        G    P ++A  A++
Sbjct: 179 RNVRVNAIAPGYIETQLT-EDWWNAQPDPAAARAETLALQPMKRIGR---PEEVAMTAVF 234

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD+A +++   + +DGG
Sbjct: 235 LASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 1e-37
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 12/258 (4%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIAC 87
             +VA++ G    +G          G +V +ADI  +     A+E+        A     
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D T E  V            ++D++  NAG+A      I D  L  FD+ +++N+ G   
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF--ITDFQLGDFDRSLQVNLVGYFL 118

Query: 148 GIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             +  +R+MI     G I+   S +G +G      YS +K   +GL +S+A +L EYGI 
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 207 INCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           ++ +    +    + + +   YA   G+     +E  Y   V     C+  D+ N  L+ 
Sbjct: 179 VHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDE-VEQYYIDKVPLKRGCDYQDVLNMLLFY 237

Query: 264 ASDDAKYVSGHNLVVDGG 281
           AS  A Y +G ++ V GG
Sbjct: 238 ASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  133 bits (336), Expect = 2e-37
 Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 6/254 (2%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
            KVAL+T A+SGIG A A      GA+V I     +  ++ A EL   G     +  D+T
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
              D+   V+       ++DI+ NNAG     P    +L  E + +   + +  V+  ++
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGP--PPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
                M  R  G I+  +S+T           +V+++ +IGLVK+++ EL   G+ +N +
Sbjct: 119 AVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSV 178

Query: 211 SPFAIPTPFVMEEMSQIYAGVDAS-RLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
            P  I T  V   +         S    E   ++ +  G   +P ++A    +LAS+ A 
Sbjct: 179 LPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKAS 238

Query: 270 YVSGHNLVVDGGFT 283
           Y++G  ++VDGG T
Sbjct: 239 YITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 2e-37
 Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 18/257 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  KVA++TG A+ IG A A   ++ GA+V I DI    G   A  LG  A FIA D+T 
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD 63

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL----EVFDQVMRINVRGVVA 147
           ++ +  AV   +++  ++DI+ N A   C    + +D  L      +   + +N+     
Sbjct: 64  DAAIERAVATVVARFGRVDILVNLA---C----TYLDDGLASSRADWLAALDVNLVSAAM 116

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +   +  R  G I+   S++       +  Y  SK+AI  L +SMA +L   GIR+
Sbjct: 117 LAQAAHPHL-ARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N +SP    +  VM+E+S    G D ++   +     +L G   +P ++A    +L SD 
Sbjct: 176 NSVSPGWTWSR-VMDELS----GGDRAKADRVAAPFHLL-GRVGDPEEVAQVVAFLCSDA 229

Query: 268 AKYVSGHNLVVDGGFTS 284
           A +V+G +  VDGG+++
Sbjct: 230 ASFVTGADYAVDGGYSA 246

Length = 261

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 2e-37
 Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 34/265 (12%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
            +L+ K ALITG  SGIG  TA +F++ GA+V I        +    ELG +A  I  D 
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61

Query: 90  TKESDVSDAVDF--TISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
               DV+        +++   +LD ++ NAGVA      + D +  +FD+    NV+G  
Sbjct: 62  ---GDVAAQKALAQALAEAFGRLDAVFINAGVA--KFAPLEDWDEAMFDRSFNTNVKGPY 116

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             I+ +   ++   +  +L   S+   +G      Y+ SK+A++ L K+++ EL   GIR
Sbjct: 117 FLIQ-ALLPLLANPASIVLNG-SINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIR 174

Query: 207 INCISPFAIPTPFV---------MEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           +N +SP  + TP           ++ + +QI A V   R            GT   P +I
Sbjct: 175 VNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRF-----------GT---PEEI 220

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A A LYLASD++ ++ G  ++VDGG
Sbjct: 221 AKAVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  132 bits (335), Expect = 2e-37
 Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 12/236 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP-NATFIACDV 89
            L+ KVALITGA+SGIG+ATA      GAKVV+A  + +  +  A E+G   A  +A DV
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T  + V  A++    +  ++DI+ NNAG+A   P  + + +L+ +D+++  NV+G++ G 
Sbjct: 63  TDRAAVEAAIEALPEEFGRIDILVNNAGLALGDP--LDEADLDDWDRMIDTNVKGLLNGT 120

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +     M+ R+SG I+   S+ G         Y  +K+A+      +  EL   GIR+  
Sbjct: 121 RAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTV 180

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           ISP  + T     E S +    D  R  ++      L      P DIA A L+ A+
Sbjct: 181 ISPGLVET----TEFSTVRFEGDDERADKVYKGGTAL-----TPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  132 bits (333), Expect = 4e-37
 Identities = 80/263 (30%), Positives = 117/263 (44%), Gaps = 31/263 (11%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN---ATFIACDVTKES 93
            L+TGAA GIG A A      GA+V   D   +   +   +L            DV   +
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            V + V     ++  +D++ N AG+      +I  L+ E +     +N  GV    +  +
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGIL--RLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHT-------YSVSKSAIIGLVKSMAAELCEYGIR 206
             M  RRSG I+   S        A +        Y+ SK+A+  L K +  EL  YGIR
Sbjct: 119 PRMKRRRSGAIVTVGSN-------AANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIR 171

Query: 207 INCISPFAIPTPFVM----EEMS--QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            N +SP +  T        +E    Q+ AG          +  G+  G   EP+DIANA 
Sbjct: 172 CNVVSPGSTDTEMQRQLWNDEYGEQQVIAGSPEQ------FRLGIPLGKIAEPSDIANAV 225

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
           L+LASD A +++ H+LVVDGG T
Sbjct: 226 LFLASDLASHITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  131 bits (333), Expect = 5e-37
 Identities = 78/267 (29%), Positives = 115/267 (43%), Gaps = 38/267 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
              K   +TGAA GIG A A  F+  GAKV+  D      +       P ATF   DV+ 
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDY-----PFATF-VLDVSD 59

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + V+      +++   LD++ N AG+      +   L+ E + Q   +N  G     + 
Sbjct: 60  AAAVAQVCQRLLAETGPLDVLVNAAGIL--RMGATDSLSDEDWQQTFAVNAGGAFNLFRA 117

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHT-------YSVSKSAIIGLVKSMAAELCEYG 204
                  +RSG I+   S        A H        Y  SK+A+  L K +  EL  YG
Sbjct: 118 VMPQFRRQRSGAIVTVGSN-------AAHVPRIGMAAYGASKAALTSLAKCVGLELAPYG 170

Query: 205 IRINCISPFAIPTPFVMEE--------MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           +R N +SP +  T   M+           Q+ AG          +  G+  G    P +I
Sbjct: 171 VRCNVVSPGSTDTD--MQRTLWVDEDGEQQVIAGFPEQ------FKLGIPLGKIARPQEI 222

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGFT 283
           ANA L+LASD A +++  ++VVDGG T
Sbjct: 223 ANAVLFLASDLASHITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  131 bits (332), Expect = 5e-37
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 14/251 (5%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKE---LGPNATFIACDVTKE 92
           AL+TG + GIGKA A +    GA VVI   +      + A E   LG  A  +  DV++ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
            DV +       +  +LD++ +NA  A    R + +L    +D  M  N++ +V   + +
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNA--AAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 153 TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
            ++M  R  G I+  +S+  +           +K+A+  LV+ +A EL   GIR+N +SP
Sbjct: 119 AKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSP 178

Query: 213 FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS 272
             I T     +    +       L     +T    G    P D+A+A  +L SD A+ ++
Sbjct: 179 GVIDT-----DALAHFPNR-EDLLEAAAANTPA--GRVGTPQDVADAVGFLCSDAARMIT 230

Query: 273 GHNLVVDGGFT 283
           G  LVVDGG +
Sbjct: 231 GQTLVVDGGLS 241

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 8e-37
 Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 12/254 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--QQTAKELGPNATFIACD 88
            L+ KVA++TG  +G+G+  A      GA ++I          ++  ++ G   TF+  D
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVD 71

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +TK       V   + +  ++DI+ NNAG   + P  +++   E ++ VM IN+  V   
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP--LLEYKDEDWNAVMDINLNSVYHL 129

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +   +VM  + SG I+  AS+    GG     Y+ SK  + GL K+ A EL  Y I++N
Sbjct: 130 SQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVN 189

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I+P  I T       + I A  D +R  E++    +  G   EP+D+  AA++LAS  +
Sbjct: 190 AIAPGYIKT----ANTAPIRA--DKNRNDEIL--KRIPAGRWGEPDDLMGAAVFLASRAS 241

Query: 269 KYVSGHNLVVDGGF 282
            YV+GH L VDGG+
Sbjct: 242 DYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  131 bits (330), Expect = 9e-37
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 26/262 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           + ++KVA++TGAA GIG+A A      GA VV+ADI  +  ++ AK++   G  A  +  
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMRINVRGVV 146
           DV+         D T+S    +D + NNA +        ++ +  + + + M +N+ G +
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              +   + M  R  G I+  +S       L  + Y ++K  + GL + +A EL    IR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAW---LYSNFYGLAKVGLNGLTQQLARELGGMNIR 179

Query: 207 INCISPFAIPTP----FVMEEMSQ-IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           +N I+P  I T        +E    +  G+  SR+           GT   P D+    L
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRM-----------GT---PEDLVGMCL 225

Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           +L SD+A +++G    VDGG  
Sbjct: 226 FLLSDEASWITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  130 bits (330), Expect = 1e-36
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 29/264 (10%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIA--CD 88
           E+K+ LITGAA  IGKA     +S GA++++ADI     +Q  +EL        IA   D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGVVA 147
           +T +  + + ++  + K  ++DI+ NNA  + K       +   E +++V+ +N+ G   
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH----------TYSVSKSAIIGLVKSMA 197
             +   ++   +  G I+  AS+ G++    +            YSV K+ II L K +A
Sbjct: 121 CSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYLA 180

Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
               + GIR+N ISP  I            +      +  +      +L      P D+ 
Sbjct: 181 KYYADTGIRVNAISPGGILNN-----QPSEFLE----KYTKKCPLKRML-----NPEDLR 226

Query: 258 NAALYLASDDAKYVSGHNLVVDGG 281
            A ++L SD + YV+G NLV+DGG
Sbjct: 227 GAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 2e-36
 Identities = 58/178 (32%), Positives = 102/178 (57%), Gaps = 5/178 (2%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESD 94
           +ITGAASG+G+A A ++   G ++ +AD+  + G++T K L   G +  +  CDV   S 
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           ++        K   +D++ NNAGVA  +     +L+LE +D  + IN+ GVV G K    
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVA--SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
           +   ++SG I+  AS+ GL+ G A  +Y+V+K+ ++ L +++  EL +  I ++ + P
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 2e-36
 Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 16/258 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K+AL+TGA+ GIG+A A      GA V+++  +    Q  A  +   G  A  +AC 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR--SIVDLNLEVFDQVMRINVRGVV 146
           + +   +         +H +LDI+ NNA      P    I+D +L  F + + +N+RG  
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAA---NPYFGHILDTDLGAFQKTVDVNIRGYF 122

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                + ++M  +  G I+  ASV G+  G  Q  YS++K+A+I + K+ A E   +GIR
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIR 182

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N + P    T F         A      +L+   +   L   H EP+++A A LYLASD
Sbjct: 183 VNALLPGLTDTKFAS-------ALFKNDAILKQALAHIPL-RRHAEPSEMAGAVLYLASD 234

Query: 267 DAKYVSGHNLVVDGGFTS 284
            + Y +G  L VDGG+ S
Sbjct: 235 ASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 2e-36
 Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 22/265 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE----LGPNATFIAC 87
           LE KV +ITG ++G+G+A A +F    AKVVI     +       E     G  A  +  
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT ESDV + +   + +   LD+M NNAG+    P    +++LE +++V+  N+ G   
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSH--EMSLEDWNKVINTNLTGAFL 122

Query: 148 GIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           G + + +  +     G I+  +SV   +       Y+ SK  +  + +++A E    GIR
Sbjct: 123 GSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIR 182

Query: 207 INCISPFAIPTPFVMEEMS--QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +N I P AI TP   E+ +  +  A V++           +  G   +P +IA  A +LA
Sbjct: 183 VNNIGPGAINTPINAEKFADPKQRADVESM----------IPMGYIGKPEEIAAVAAWLA 232

Query: 265 SDDAKYVSGHNLVVDGGFT---SFK 286
           S +A YV+G  L  DGG T   SF+
Sbjct: 233 SSEASYVTGITLFADGGMTLYPSFQ 257

Length = 261

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  129 bits (327), Expect = 3e-36
 Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 12/204 (5%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE 92
           +  VA++TG ASG+G AT  + ++ GAKVVI D+ +  G+  AK LG N  F+  DVT E
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAK-LGDNCRFVPVDVTSE 59

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGV--ACKT--PRSIVDLNLEVFDQVMRINVRGVVAG 148
            DV  A+    +K  +LDI+ N AG+  A KT   +     +LE+F +V+ +N+ G    
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNV 119

Query: 149 IKHSTRVM------IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           I+ +   M           G I+ TASV    G + Q  YS SK  I+G+   +A +L  
Sbjct: 120 IRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAP 179

Query: 203 YGIRINCISPFAIPTPFVMEEMSQ 226
            GIR+  I+P    TP ++  + +
Sbjct: 180 QGIRVVTIAPGLFDTP-LLAGLPE 202

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  129 bits (327), Expect = 4e-36
 Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 16/267 (5%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT-FIACD 88
             L++KVA++TG + GIGKA   +    G+ V+  DI         KE   N   +   D
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI---------KEPSYNDVDYFKVD 52

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+ +  V   +D+ ISK+ ++DI+ NNAG+       I  +  + +D+++ +NV G+   
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA--IHAVEEDEWDRIINVNVNGIFLM 110

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            K++   M+ +  G I+  ASV           Y  SK A++GL +S+A +     IR  
Sbjct: 111 SKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCV 169

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYLASD 266
            + P +I TP + E  +++  G D   +   +   G +       +P ++A    +LASD
Sbjct: 170 AVCPGSIRTPLL-EWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASD 228

Query: 267 DAKYVSGHNLVVDGGFTSFKNLKLPAP 293
            A +++G  + VDGG  +   L  P  
Sbjct: 229 LASFITGECVTVDGGLRALIPLSTPKI 255

Length = 258

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  129 bits (325), Expect = 7e-36
 Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 11/258 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFIACD 88
           KVAL+TG+ SGIG   A    + GA +V+      A+I+       AK  G    +   D
Sbjct: 3   KVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH-GVKVLYHGAD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++K + + D V +   +   +DI+ NNAG+    P  I D   E +D ++ +N+  V   
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP--IEDFPTEKWDAIIALNLSAVFHT 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + +   M  +  G I+  ASV GL+    +  Y  +K  ++GL K +A E    G+  N
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179

Query: 209 CISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
            I P  + TP V +++S +    GV   +    +            P  + + A++LASD
Sbjct: 180 AICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASD 239

Query: 267 DAKYVSGHNLVVDGGFTS 284
            A  ++G  + VDGG+T+
Sbjct: 240 AASQITGTAVSVDGGWTA 257

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 8e-36
 Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 22/230 (9%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
             L  KV  ITG A GIG ATA    + GA+V I D+   L ++TA ELG        DV
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGL-VVGGPLDV 59

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T  +  +  +D   +    +D++ NNAGV    P   +D    V  +++ +NV GV+ G 
Sbjct: 60  TDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGP--FLDEPDAVTRRILDVNVYGVILGS 117

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           K +   M+PR  G ++  AS+ G +      TY  SK A++G   +   EL   G+ ++ 
Sbjct: 118 KLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSV 177

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           + P      FV  E+    AG   ++  + V           EP D+A A
Sbjct: 178 VLP-----SFVNTELI---AGTGGAKGFKNV-----------EPEDVAAA 208

Length = 273

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  128 bits (324), Expect = 9e-36
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 12/190 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVV-----IADIQHQLGQQTAKELGPNATFIACDV 89
           KV LITG +SGIG A A    + G +V+        ++        + L  N   +  DV
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESL-----GELLNDNLEVLELDV 55

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E  +  AV   I +  ++D++ NNAG     P  + + ++E   ++  +NV G +   
Sbjct: 56  TDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGP--LEETSIEEVRELFEVNVFGPLRVT 113

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +    +M  + SG I+  +SV GL+       Y  SK+A+  L +S+  EL  +GI++  
Sbjct: 114 RAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTI 173

Query: 210 ISPFAIPTPF 219
           I P  + T F
Sbjct: 174 IEPGPVRTGF 183

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  127 bits (319), Expect = 4e-35
 Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 19/258 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K ALITGA++GIGK  A  ++  GA+V IA       ++ A E+   G     + CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V++   V+  +D   ++   +DI   NAG+   TP  ++D+ LE F ++   NV GV   
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP--MLDMPLEEFQRLQNTNVTGVFLT 124

Query: 149 IKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCEYGI 205
            + + + M+ + + G I+ TAS++G +  + Q    Y  SK+A+I L K+MA EL  + I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N +SP  I T  V E  ++             ++   +  G    P ++A   LYLAS
Sbjct: 185 RVNSVSPGYILTELV-EPYTEYQP----------LWEPKIPLGRLGRPEELAGLYLYLAS 233

Query: 266 DDAKYVSGHNLVVDGGFT 283
           + + Y++G ++V+DGG+T
Sbjct: 234 EASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 5e-35
 Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 7/259 (2%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---GQQTAKELGPNA 82
           S     L+ K+ALITGA+ GIG A A  +   GA +V  DI  +L   G    +ELG  A
Sbjct: 2   SENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEA 61

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
               CDVT E  V   V     +   +DI+ NNAG+  + P  +++++ E F QV+ I++
Sbjct: 62  HGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIP--MLEMSAEDFRQVIDIDL 119

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                  K     MI +  G I+   S+   LG      Y+ +K  +  L K++A+E  E
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 179

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             I+ N I P  I TP     + ++ A        + + +         +P D+A  A++
Sbjct: 180 ANIQCNGIGPGYIATP-QTAPLRELQADGSRHPFDQFIIAK-TPAARWGDPEDLAGPAVF 237

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD + +V+GH L VDGG
Sbjct: 238 LASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  126 bits (318), Expect = 6e-35
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 8/190 (4%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTKE 92
           + LITG  SGIG+  A +F   GAKVVI DI  +  ++TA   ++ G    +  CDV+K 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
            +V +A      +   + I+ NNAGV   + + +++L  E  ++   +N        K  
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVV--SGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 153 TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY---GIRINC 209
              M+ R  G I+  ASV GL+       Y  SK+A +G  +S+  EL  Y   GI+   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 210 ISPFAIPTPF 219
           + P+ I T  
Sbjct: 179 VCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  126 bits (317), Expect = 7e-35
 Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 21/251 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFI-ACDVT 90
           L+ KV  ITG   G+G+ATAA   + GA+V +         QT   +  +A  I   D+ 
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLV 64

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
                  AVD    +  +LD + N AG       +I D + + +D++  +NV+  +   K
Sbjct: 65  DPQAARRAVDEVNRQFGRLDALVNIAGAF--VWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +   +     G I+   +   L  G     Y+ +K+ +  L +++AAEL + GI +N +
Sbjct: 123 AALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAV 182

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
            P  I TP          A +  +     V            P  IA    +L SD+A+ 
Sbjct: 183 LPSIIDTP-------PNRADMPDADFSRWV-----------TPEQIAAVIAFLLSDEAQA 224

Query: 271 VSGHNLVVDGG 281
           ++G ++ VDGG
Sbjct: 225 ITGASIPVDGG 235

Length = 239

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  126 bits (317), Expect = 9e-35
 Identities = 88/263 (33%), Positives = 129/263 (49%), Gaps = 33/263 (12%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIAC 87
           +L+ K A+ITGA +GIGK  A  F + GA VV++DI            ++LG  A    C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+T E ++S   DF +SK  ++DI+ NNAG     P    D+ +  F +   +N    V 
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKP---FDMPMADFRRAYELN----VF 120

Query: 148 GIKHSTRVMIPRRS----GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              H ++++ P       G IL   S+      +   +Y+ SK+A   LV++MA +L E 
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDA-SRLLELVYSTGVLEGTHC----EPNDIAN 258
            IR+N I+P AI T              DA   ++       +L+ T      +P DIAN
Sbjct: 181 NIRVNGIAPGAILT--------------DALKSVITPEIEQKMLQHTPIRRLGQPQDIAN 226

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           AAL+L S  A +VSG  L V GG
Sbjct: 227 AALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 1e-34
 Identities = 87/252 (34%), Positives = 139/252 (55%), Gaps = 24/252 (9%)

Query: 32  LEEKVALITGAA-SGIGKATAAKFISNGAKVVIADI-QHQLGQ---QTAKELGPNATF-I 85
           L  KV L+T AA +GIG ATA + +  GA+VVI+DI + +LG+   + A ELG      +
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            CDVT E+ V   +D  + +  +LD++ NNAG+  +TP  +VD+  + + +V+ + + G 
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTP--VVDMTDDEWSRVLDVTLTGT 132

Query: 146 VAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHT---YSVSKSAIIGLVKSMAAELC 201
               + + R M  R   G I+  ASV   LG  AQH    Y+ +K+ ++ L +  A E  
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASV---LGWRAQHGQAHYAAAKAGVMALTRCSALEAA 189

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           EYG+RIN ++P     PF+        A V ++ LL+ + +     G   EP ++AN   
Sbjct: 190 EYGVRINAVAPSIAMHPFL--------AKVTSAELLDELAAREAF-GRAAEPWEVANVIA 240

Query: 262 YLASDDAKYVSG 273
           +LASD + Y++G
Sbjct: 241 FLASDYSSYLTG 252

Length = 262

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  125 bits (316), Expect = 1e-34
 Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 27/261 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNATF 84
           L  KVAL+TGA+ GIG+A A +   +GA VV   + +   +  A+E+       G  A  
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVV---VNYASSKAAAEEVVAEIEAAGGKAIA 57

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV+  S V+   D        +DI+ NNAGV  K P  I + + E FD++  +N +G
Sbjct: 58  VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP--IAETSEEEFDRMFTVNTKG 115

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
               ++ + + +  R  G I+  +S            Y+ SK+A+    + +A EL   G
Sbjct: 116 AFFVLQEAAKRL--RDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRG 173

Query: 205 IRINCISPFAIPTPFVMEEMS--QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           I +N ++P  + T       +   +      S L  L            EP DIA    +
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLGRL-----------GEPEDIAPVVAF 222

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LAS D ++V+G  +  +GG+ 
Sbjct: 223 LASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  129 bits (327), Expect = 3e-34
 Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 10/253 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           +V  ITG A GIG+A A +F + G +++I D   +  ++ A+ LG     +  D+T E+ 
Sbjct: 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAA 329

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V  A     ++  +LD++ NNAG+A     S ++ + E F +V  +N+ G  A  + + R
Sbjct: 330 VESAFAQIQARWGRLDVLVNNAGIAEVFKPS-LEQSAEDFTRVYDVNLSGAFACARAAAR 388

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
           +M   + G I+   S+  LL    ++ Y  SK+A+  L +S+A E    GIR+N ++P  
Sbjct: 389 LM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGY 446

Query: 215 IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH 274
           I TP V+   +   A  D+ R    +   G       +P ++A A  +LAS  A YV+G 
Sbjct: 447 IETPAVLALKASGRADFDSIRRRIPLGRLG-------DPEEVAEAIAFLASPAASYVNGA 499

Query: 275 NLVVDGGFTSFKN 287
            L VDGG+T+F +
Sbjct: 500 TLTVDGGWTAFGD 512

Length = 520

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  124 bits (314), Expect = 3e-34
 Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 19/255 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG----PNATFIACDVT 90
           KV ++TG + GIG+     F+ NGAKVV        GQ    EL      +  F+ CDVT
Sbjct: 10  KVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVT 69

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           KE D+   +  T+ +  ++D + NNAG      ++  + + + F  ++ +N+        
Sbjct: 70  KEEDIKTLISVTVERFGRIDCLVNNAGWH-PPHQTTDETSAQEFRDLLNLNLISYFL--- 125

Query: 151 HSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +++  +P   +  G I+  +S+ G +G      Y  +K AI  + K++A +   YG+R+
Sbjct: 126 -ASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRV 184

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDAS-RLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           NCISP  I TP + EE++       A+ +  EL    G + GT     +   AAL+LA+ 
Sbjct: 185 NCISPGNIWTP-LWEELAAQTPDTLATIKEGELAQLLGRM-GT---EAESGLAALFLAA- 238

Query: 267 DAKYVSGHNLVVDGG 281
           +A + +G +L++ GG
Sbjct: 239 EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  122 bits (308), Expect = 2e-33
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL----GPNATFIA 86
           L+ KV +ITGA+SGIG+  A      GA++V+ A  + +L ++   E      P+   + 
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL-EEVKSECLELGAPSPHVVP 59

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D++   D    V+  +     LDI+ NNAG++ ++     D +++V  ++M +N  G V
Sbjct: 60  LDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSL--FHDTSIDVDRKIMEVNYFGPV 117

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           A  K +   +I R  G I+  +S+ G +G   +  Y+ SK A+ G   S+ AEL E  I 
Sbjct: 118 ALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNIS 177

Query: 207 INCISPFAIPTPFVMEEMSQIY 228
           +  + P  I T   M  +S   
Sbjct: 178 VTVVCPGLIDTNIAMNALSGDG 199

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  121 bits (305), Expect = 4e-33
 Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 21/253 (8%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIACDVTKE 92
           VA++TG A+GIGKA A      GA VVIAD++ +  +  A      G  A  + C+VT E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV----RGVVAG 148
            D+   V  T+S+   + I+ NNAG     P  +  +  E F+   ++N+    R     
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDM-PMTEEDFEWAFKLNLFSAFRLSQLC 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
             H    M     G IL  +S++     +    Y  SK+A+  + +++A +L   GIR+N
Sbjct: 120 APH----MQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVN 175

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            ++P A+         +   A V    +   +     L G   EP DIANAAL+L S  +
Sbjct: 176 AVAPGAV--------KTDALASVLTPEIERAMLKHTPL-GRLGEPEDIANAALFLCSPAS 226

Query: 269 KYVSGHNLVVDGG 281
            +VSG  L V GG
Sbjct: 227 AWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  121 bits (305), Expect = 4e-33
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 22/255 (8%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
            ++TGAA GIG+A A   +  GA V+  D+         +   P       DV   + V 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFV---LLLEYGDPLRLTPL-DVADAAAVR 56

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
           +     +++H  +D + N AGV    P +   L+ E ++Q   +NV GV   ++     M
Sbjct: 57  EVCSRLLAEHGPIDALVNCAGVL--RPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHM 114

Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
             RR+G I+  AS    +  ++   Y  SK+A+  L K +  EL  YG+R N +SP +  
Sbjct: 115 KDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTD 174

Query: 217 TPFVMEEMS--------QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
           T   M+           Q+ AGV         +  G+  G   +P DIANA L+LASD A
Sbjct: 175 TA--MQRTLWHDEDGAAQVIAGVPEQ------FRLGIPLGKIAQPADIANAVLFLASDQA 226

Query: 269 KYVSGHNLVVDGGFT 283
            +++ H+LVVDGG T
Sbjct: 227 GHITMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  121 bits (305), Expect = 7e-33
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 23/264 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFI 85
           +L+ + ALITGA+ GIG A A +F+  GA V+I       +     +   +        +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           A DV+ + D    +D+     + L I+ NNAG   +  ++ +D   + +  +   N+   
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSA 123

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               +++  ++    S  I+   SV+GL    +   Y ++K+A++ + +++A E  E GI
Sbjct: 124 FELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGI 183

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC----EPNDIANAAL 261
           R+N ++P+ I TP     +S               Y   V+E T      EP ++A A  
Sbjct: 184 RVNAVAPWYIRTPLTSGPLSDPD------------YYEQVIERTPMRRVGEPEEVAAAVA 231

Query: 262 YLASDDAKYVSGHNLVVDGGFTSF 285
           +L    A Y++G  + VDGGF  +
Sbjct: 232 FLCMPAASYITGQCIAVDGGFLRY 255

Length = 257

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  119 bits (300), Expect = 2e-32
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 16/255 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKELGPNATFIACDVTKES 93
           +V L+TGA+ G+G A A  F   GA+VV+   +     +  A E G  A  I  DV    
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 94  DVSDAVDFTISKHN-QLDIMYNNAGVACK----TPRSIVDLNLEVFDQVMRINVRGVVAG 148
            V   ++     H   +D + NNA +         ++   ++ E + Q +   V+G +  
Sbjct: 61  QVQAMIE-EAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           ++        R SG ++   +       +  H Y+ +K+A++G  ++MA EL  YGI +N
Sbjct: 120 LQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            +S   +             +      + + +  T  L G    P DIA+A L+ AS  A
Sbjct: 180 MVSGGLLKV--------TDASAATPKEVFDAIAQTTPL-GKVTTPQDIADAVLFFASPWA 230

Query: 269 KYVSGHNLVVDGGFT 283
           + V+G NLVVDGG  
Sbjct: 231 RAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  118 bits (298), Expect = 5e-32
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 16/263 (6%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNAT 83
           T    L  KVAL+T +  GIG A A +   +GA VV++  + Q   +    L   G + T
Sbjct: 3   TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRIN 141
              C V K  D    V   ++ H  +DI+ +NA V    P   +I+D   EV+D+++ +N
Sbjct: 63  GTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAV---NPFFGNILDSTEEVWDKILDVN 119

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           V+      K     M  R  G ++  +SV           Y+VSK+A++GL K++A EL 
Sbjct: 120 VKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELA 179

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
              IR+NC++P  I T F     S     +D +    +  +  +      +P D A    
Sbjct: 180 PRNIRVNCLAPGLIKTSF-----SSAL-WMDKAVEESMKETLRIRRLG--QPEDCAGIVS 231

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +L S+DA Y++G  +VV GG  S
Sbjct: 232 FLCSEDASYITGETVVVGGGTPS 254

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  118 bits (297), Expect = 6e-32
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 30/259 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNATFIAC 87
           K+AL+TGA  GIG A A + +++G +V+        G   AK+                 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFS---GNDCAKDWFEEYGFTEDQVRLKEL 59

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT   + ++A+     +   +DI+ NNAG+          ++ + ++ V+  N+  V  
Sbjct: 60  DVTDTEECAEALAEIEEEEGPVDILVNNAGIT--RDSVFKRMSHQEWNDVINTNLNSVFN 117

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             +     M  +  G I+  +SV GL G   Q  YS +K+ +IG  K++A+E   YGI +
Sbjct: 118 VTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITV 177

Query: 208 NCISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           NCI+P  I TP V     E +  I   +   RL                P +IA A  +L
Sbjct: 178 NCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRL--------------GTPEEIAAAVAFL 223

Query: 264 ASDDAKYVSGHNLVVDGGF 282
            S+ A +++G  + ++GG 
Sbjct: 224 VSEAAGFITGETISINGGL 242

Length = 245

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 7e-32
 Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 49/270 (18%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACDVTKES 93
           + AL+TGAA GIG+A A +F++ G +V+  DI        A  LG      +ACD+T  +
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTP---------RSIVDLNLEVFDQVMRINVRG 144
            ++ A+    ++   +D++  NAG A             R+   LNLE       + V  
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLE----AAYLCVEA 118

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+ G       M+ R  G ++   SV G +  L    YS +K+ +I   K +A E   +G
Sbjct: 119 VLEG-------MLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFG 170

Query: 205 IRINCISPFAIPT----------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
           IR N ++P  + T          P V EE+ + Y       L +              P+
Sbjct: 171 IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYP------LQDFA-----------TPD 213

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGFTS 284
           D+ANA L+LAS  A+ ++G  L VDGG T+
Sbjct: 214 DVANAVLFLASPAARAITGVCLPVDGGLTA 243

Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 9e-32
 Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 37/261 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDVT 90
           L  +V L+TG   GIG   A  F++ GA VV+       G++  + +    A F A DV 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHAADVR 57

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAG------VACKTPR---SIVDLNLEVFDQVMRIN 141
               V+  VD  + +H +LD++ NNAG       A  +PR    IV+LNL     V +  
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ-- 115

Query: 142 VRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
                     +  VM  +   G I+   SV+G         Y  +K+ ++ L +S+A E 
Sbjct: 116 ---------AANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEW 166

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
               +R+N +    + T     E S+++ G      +  V +T V  G    P DIA A 
Sbjct: 167 AP-KVRVNAVVVGLVRT-----EQSELHYGDAEG--IAAVAAT-VPLGRLATPADIAWAC 217

Query: 261 LYLASDDAKYVSGHNLVVDGG 281
           L+LASD A YVSG NL V GG
Sbjct: 218 LFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  117 bits (296), Expect = 9e-32
 Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 20/259 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACDVT 90
           LE KVAL+TGA +G+G+  A      GA +V A        QQ  + LG     +  D++
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +   VD  + +   +DI+ NNAG+  +      + + + +D VM +N++ V    +
Sbjct: 63  DIEAIKALVDSAVEEFGHIDILVNNAGIIRRA--DAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 151 HSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
            + +  + + R G I+  AS+    GG+   +Y+ SK A+ GL K +A E    GI +N 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE----GTHCEPNDIANAALYLAS 265
           I+P  + T         + A  D  R      +  +LE    G    P+DI   A++LAS
Sbjct: 181 IAPGYMAT----NNTQALRA--DEDR------NAAILERIPAGRWGTPDDIGGPAVFLAS 228

Query: 266 DDAKYVSGHNLVVDGGFTS 284
             + YV+G+ L VDGG+ +
Sbjct: 229 SASDYVNGYTLAVDGGWLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  123 bits (311), Expect = 1e-31
 Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 20/266 (7%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-----ATF 84
           + L  +VA +TG A GIG+ TA +  + GA VV+AD+  +  +  A E+        A  
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT E  V  A       +  +DI+ NNAG+A  +P    +  L+ +   + I   G
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSP--FEETTLQEWQLNLDILATG 527

Query: 145 VVAGIKHSTRVMIPRRSGC---ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                + + R M  R  G    I+  AS   +  G     YS +K+A   L + +AAE  
Sbjct: 528 YFLVAREAFRQM--REQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGG 585

Query: 202 EYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
            YGIR+N ++P A+     +      EE +  Y G+ A  L E  Y+   L   H  P D
Sbjct: 586 TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAY-GIPADELEEH-YAKRTLLKRHIFPAD 643

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           IA A  +LAS  ++  +G  + VDGG
Sbjct: 644 IAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 2e-31
 Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 8/258 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K A++TGAASGIGK  A +    GA V IAD+        A E+   G  A  +A D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E  V+  +D    +   +DI+ +NAG+    P  I + +   + ++  I+V G    
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNP--IENYSFADWKKMQAIHVDGAFLT 122

Query: 149 IKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            K + + M    R G ++   SV        +  Y  +K  ++GL + +A E  ++ +R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 208 NCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           + + P  + TP V +++ +     G+    +++ V     ++G      D+A   L+L+S
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 266 DDAKYVSGHNLVVDGGFT 283
             +  ++G + VV  G+ 
Sbjct: 243 FPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  116 bits (292), Expect = 5e-31
 Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 23/257 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKE---LGPNATFIACDVT 90
           +VA++T + SGIGKA A      G  + I     + G ++TA+E    G  A     D++
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
              + + A+D  I +  ++D++ NNAG   K P   +D++ + + ++  ++V G     +
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAP--FLDMDFDEWRKIFTVDVDGAFLCSQ 120

Query: 151 HSTRVMIPR-RSGCILCTASV---TGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            + R M+ + + G I+   SV   T L G  A   Y+ +K A+ GL K+MA EL E+GI 
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASA---YTAAKHALGGLTKAMALELVEHGIL 177

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N ++P AI TP  M  M       D     +     G+  G   + ++IA+   +L S+
Sbjct: 178 VNAVAPGAIATP--MNGMD----DSDV----KPDSRPGIPLGRPGDTHEIASLVAWLCSE 227

Query: 267 DAKYVSGHNLVVDGGFT 283
            A Y +G +L+VDGGF 
Sbjct: 228 GASYTTGQSLIVDGGFM 244

Length = 256

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  116 bits (291), Expect = 6e-31
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 11/257 (4%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACD 88
             +VA++ G    +G+         G  V +ADI  +  ++ A E+    G  A     D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
            T E  V            ++D++  +AG+A      I D  L  FD+ +++N+ G    
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK--ITDFELGDFDRSLQVNLVGYFLC 118

Query: 149 IKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +  +++MI     G I+   S +G +G      YS +K   +GL +S+A +L E+GI +
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITV 178

Query: 208 NCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N +    +    + + +   YA   G+  S  +E  Y   V     C+  D+ N  L+ A
Sbjct: 179 NSLMLGNLLKSPMFQSLLPQYAKKLGIKESE-VEQYYIDKVPLKRGCDYQDVLNMLLFYA 237

Query: 265 SDDAKYVSGHNLVVDGG 281
           S  A Y +G ++ + GG
Sbjct: 238 SPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  115 bits (290), Expect = 9e-31
 Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 22/262 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAK--ELGPNATFIACD 88
           LE K AL+TG   GIG A   +    GA+V   A  Q +L +   +  E G       CD
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 89  VTKESDVSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           V+  S+  + +D   S    +L+I+ NNAG      +   D   E +  +M  N      
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTN--IRKEAKDYTEEDYSLIMSTNFEA--- 118

Query: 148 GIKHSTRVMIP--RRSGC--ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              H +R+  P  + SG   I+  +SV G++   +   Y  +K A+  L +S+A E  + 
Sbjct: 119 -AYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKD 177

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            IR+N ++P+ I TP V   + Q          L+ V     L     EP ++A    +L
Sbjct: 178 NIRVNAVAPWVIATPLVEPVIQQ-------KENLDKVIERTPL-KRFGEPEEVAALVAFL 229

Query: 264 ASDDAKYVSGHNLVVDGGFTSF 285
               A Y++G  + VDGG T+ 
Sbjct: 230 CMPAASYITGQIIAVDGGLTAN 251

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  115 bits (289), Expect = 1e-30
 Identities = 72/255 (28%), Positives = 126/255 (49%), Gaps = 9/255 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACD 88
           L++K A++TG   GIG AT  +F   GAKV + D+  +  ++ A   +  G NA   ACD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +T    V  AV         +D++ NNAG     P +  +  L  +++++ IN+ G +  
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPL--WERLIAINLTGALHM 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
                  M+ R +G I+  AS    +G   +  Y+  K  ++   K+MA E   +GI +N
Sbjct: 119 HHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            + P    T  +++++       +  +L E  ++  +  G   +P+D+  A L+ +SDDA
Sbjct: 179 VVCPGPTDTA-LLDDICG--GAENPEKLRE-AFTRAIPLGRLGQPDDLPGAILFFSSDDA 234

Query: 269 KYVSGHNLVVDGGFT 283
            +++G  L V GG T
Sbjct: 235 SFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  112 bits (282), Expect = 2e-30
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 12/172 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTA--KELGPNATFIACD 88
              LITG   G+G A A    + GA+ ++            +  A  + LG   T  ACD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V     ++  +    +    LD + +NAGV    P  + +L  E F++V+   V G    
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGP--LEELTPERFERVLAPKVTGAW-- 116

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
             +   +      G  +  +SV G+LG   Q  Y+ + +A+  L +   AE 
Sbjct: 117 --NLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 6e-30
 Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 19/263 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L  +VALITG  SGIG+A   +F++ GA+V + +   +      +  G +   +  DVT
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVT 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV----FDQVMRINVRGVV 146
             +D   AVD T+    +LD    NAG+      S+VD+  E     FD++  +NV+G +
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGI-WDYNTSLVDIPAETLDTAFDEIFNVNVKGYL 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            G K +   +     G ++ T S +    G     Y+ SK A++GLV+ +A EL    IR
Sbjct: 122 LGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IR 179

Query: 207 INCISPFAIPTPFV------MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           +N ++P    T           E S      D+  L +++ +   L     +P D     
Sbjct: 180 VNGVAPGGTVTDLRGPASLGQGETSIS----DSPGLADMIAAITPL-QFAPQPEDHTGPY 234

Query: 261 LYLASD-DAKYVSGHNLVVDGGF 282
           + LAS  +++ ++G  +  DGG 
Sbjct: 235 VLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  113 bits (284), Expect = 7e-30
 Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 29/267 (10%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKELGPNATFIACD 88
            ++ E+  L+TG + G+G A A  F   GA+VV+   Q     +  A ELG  A  +  D
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQAD 60

Query: 89  VTKESDVSDAVDFTISKHNQ-LDIMYNNAGVACK----TPRSIVDLNLEVFDQVMRINVR 143
           VT    V            + +  + NNA           +   D+  E F Q +  +V+
Sbjct: 61  VTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK 120

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--LAQHTYSVSKSAIIGLVKSMAAELC 201
           G +  I+ +   M  +  G I+     T L     +  H Y+ +K+A++GL +++AAEL 
Sbjct: 121 GALNTIQAALPGMREQGFGRIINIG--TNLFQNPVVPYHDYTTAKAALLGLTRNLAAELG 178

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS-----RLLELVYSTGVLEGTHCEPNDI 256
            YGI +N +S   + T              DAS      + +L+ +T  L      P + 
Sbjct: 179 PYGITVNMVSGGLLRT-------------TDASAATPDEVFDLIAATTPL-RKVTTPQEF 224

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGFT 283
           A+A L+ AS  A+ V+G NLVVDGG  
Sbjct: 225 ADAVLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  112 bits (283), Expect = 1e-29
 Identities = 77/266 (28%), Positives = 120/266 (45%), Gaps = 32/266 (12%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIAC 87
            L++KV +ITG A G+G+A A      GAK+ + D+  +  ++   E   LG      A 
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAG-------VACKTPRSIVDLNLEVFDQVMRI 140
           +VT E DV            QL+ + NNAG       V  K  +    ++LE F  V+ +
Sbjct: 62  NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 141 NVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           N+ GV    + +   MI     G I+  +S+    G + Q  YS SK+ +  +  + A E
Sbjct: 122 NLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKE 180

Query: 200 LCEYGIRINCISPFAIPTPFV--M--EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           L  YGIR+  I+P  I T     M  E + ++   +   RL               EP +
Sbjct: 181 LARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRL--------------GEPEE 226

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           IA+   ++  +D  YV+G  L +DGG
Sbjct: 227 IAHTVRFIIEND--YVTGRVLEIDGG 250

Length = 253

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 1e-29
 Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 15/186 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           KV +ITGA+ GIG+A A +    GA++V+A          A+EL   G  A  +  DV+ 
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD--LNLEVFDQVMRINVRGVVAGI 149
                  ++  +++   +DI+ NNAG+   T  S  D   +L VF++VMR+N  G V   
Sbjct: 62  AEACERLIEAAVARFGGIDILVNNAGI---TMWSRFDELTDLSVFERVMRVNYLGAV--- 115

Query: 150 KHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            + T   +P      G I+  +S+ GL G   +  Y+ SK A+ G   S+  EL + G+ 
Sbjct: 116 -YCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 207 INCISP 212
           +  + P
Sbjct: 175 VTVVCP 180

Length = 263

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  112 bits (283), Expect = 1e-29
 Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 19/270 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ KVA+ITG    +G A A      GAKV       + G + AKE+   G  A  +A D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAG------------VACKTPRSIVDLNLEVFDQ 136
           V   + +  A +  +++   +DI+ N AG               +T ++  DL+ E ++ 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
           V  +N+ G     +   + M+ ++ G I+  +S+           YS +K+A+    + +
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWL 182

Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           A E    G+R+N I+P    TP    ++     G    R  +++  T +  G   +P ++
Sbjct: 183 AVEFATTGVRVNAIAPGFFVTP-QNRKLLINPDGSYTDRSNKILGRTPM--GRFGKPEEL 239

Query: 257 ANAALYLASDDA-KYVSGHNLVVDGGFTSF 285
             A L+LAS+ A  +V+G  + VDGGF+++
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGGFSAY 269

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 1e-29
 Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 32/234 (13%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA-CDVTKESDVS 96
            ITGAASGIG+ATA  F + G +V   DI        A ELG    +    DVT  +   
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWD 64

Query: 97  DAV-DFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRGVVAGIKHST 153
            A+ DF  +   +LD+++NNAG+     R     D+ LE  D+V+ INV+GV+ G   + 
Sbjct: 65  AALADFAAATGGRLDVLFNNAGI----LRGGPFEDIPLEAHDRVIDINVKGVLNGAHAA- 119

Query: 154 RVMIP--RRS--GCILCTASVTGLLG--GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
              +P  + +    ++ T+S + + G  GLA   YS +K A+ GL +++  E   +GIR+
Sbjct: 120 ---LPYLKATPGARVINTSSASAIYGQPGLA--VYSATKFAVRGLTEALDLEWRRHGIRV 174

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
             + P  + T  +          VDA     L        G    P D+A A  
Sbjct: 175 ADVMPLFVDTAML----DGTSNEVDAGSTKRL--------GVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  112 bits (280), Expect = 2e-29
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 25/260 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKELGPN---ATFIA 86
           +L  KVA++TG A GIGKA        GAKVVI  +   +  +    ELG        + 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+K  D +  V+  ++   ++DI+ NNAG+     R+   LN E +++V+ +N+  V 
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT--RDRTFKKLNREDWERVIDVNLSSVF 120

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                    +     G I+  +S+ G  GG  Q  YS +K+ ++G  KS+A EL +  + 
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180

Query: 207 INCISPFAIPTPFVME----EMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +N I P  I T  V E       +I A +   R                + ++IA   +Y
Sbjct: 181 VNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRF--------------GQADEIAKGVVY 226

Query: 263 LASDDAKYVSGHNLVVDGGF 282
           L  D A Y++G  L ++GG 
Sbjct: 227 LCRDGA-YITGQQLNINGGL 245

Length = 247

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  112 bits (281), Expect = 2e-29
 Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 44/266 (16%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
            + +V L+TGA  G+G+A A  F   GAKVV+ D+               ++  A  V  
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGS------GKSSSAADKVVD 56

Query: 92  E------------SDVSDA---VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQ 136
           E              V D    V   I    ++DI+ NNAG+     RS   ++ E +D 
Sbjct: 57  EIKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGIL--RDRSFAKMSEEDWDL 114

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
           VMR++++G     + +   M  ++ G I+ T+S  GL G   Q  YS +K  ++GL  ++
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTL 174

Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           A E  +Y I  N I+P A                   SR+ E V    + +    +P  +
Sbjct: 175 AIEGAKYNITCNTIAPAA------------------GSRMTETVMPEDLFD--ALKPEYV 214

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGF 282
           A   LYL  +  + V+G    V  G+
Sbjct: 215 APLVLYLCHESCE-VTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  111 bits (278), Expect = 4e-29
 Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 19/253 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           +VAL+TGAA GIG   AA  I+ G +VV+AD+  + G + AK LG NA FIA DV  E+ 
Sbjct: 11  RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQ 70

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V+  V   + +  +LD +  NA +A     ++  L+L  +++V+ +N+ G +   KH   
Sbjct: 71  VAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP 130

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            +     G I+  AS            Y+ SK  ++ L  ++A  L    IR+N +SP  
Sbjct: 131 YLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGW 188

Query: 215 I----PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           I    P+    E +S      +A          G +E       D+A    +L S  A +
Sbjct: 189 IDARDPSQRRAEPLS------EADHAQHPAGRVGTVE-------DVAAMVAWLLSRQAGF 235

Query: 271 VSGHNLVVDGGFT 283
           V+G   VVDGG T
Sbjct: 236 VTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 5e-29
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 23/260 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  +VAL+TG+A G+G   A      GA V++        +     L   G  A  +A D
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +  E  V+ A     ++H +LDI+ NN G   +  R + +L+      ++  ++   VA 
Sbjct: 69  IADEEAVAAAFARIDAEHGRLDILVNNVGA--RDRRPLAELDDAAIRALLETDL---VAP 123

Query: 149 I---KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           I   + + + M  +  G I+   S+ G +       Y  +K  + GL++++AAE   +GI
Sbjct: 124 ILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGI 183

Query: 206 RINCISP--FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
             N I+P  FA  T   M     +   +     L          G    P +IA AA++L
Sbjct: 184 TSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL----------GRWGRPEEIAGAAVFL 233

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
           AS  A YV+GH L VDGG++
Sbjct: 234 ASPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  110 bits (277), Expect = 5e-29
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 28/257 (10%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVT 90
           ++AL+TG   GIG A   +   +G +V       + + +   Q    LG +   +  DV+
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIV--DLNLEVFDQVMRINVRGVVAG 148
                  AV    ++   +D++ NNAG+     R      +  E +  V+  N+  V   
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGIT----RDATFKKMTYEQWSAVIDTNLNSVFNV 116

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +     M  R  G I+  +SV G  G   Q  YS +K+ +IG  K++A E    G+ +N
Sbjct: 117 TQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVN 176

Query: 209 CISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
            ISP  I T  VM    + ++ I A +   RL                P +IA A  +LA
Sbjct: 177 TISPGYIATDMVMAMREDVLNSIVAQIPVGRL--------------GRPEEIAAAVAFLA 222

Query: 265 SDDAKYVSGHNLVVDGG 281
           S++A Y++G  L ++GG
Sbjct: 223 SEEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  110 bits (278), Expect = 6e-29
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 48/277 (17%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-----ATFIA 86
           L+ K  LITGA   IG A     +  G  V+ ADI  +   +  + LG        + + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS------IVDLNLEVFDQVMRI 140
            D+T +  + + +  +  K+ ++D       V C  PR+        D++L+ F++ + +
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKID-----GAVNCAYPRNKDYGKKFFDVSLDDFNENLSL 116

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------GLAQHT---YSVSKSAII 190
           ++       +   +    +  G ++  +S+ G++        G +  +   Y+  K+ II
Sbjct: 117 HLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGII 176

Query: 191 GLVKSMAAELCEYGIRINCISPFAI----PTPFVMEEMSQIYAGVDASRLLELVYSTGVL 246
            L K +A    +  IR+NC+SP  I    P  F+       Y         +     G+L
Sbjct: 177 HLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL-----NAYK--------KCCNGKGML 223

Query: 247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                +P+DI    ++L SD +KY++G N++VD GF+
Sbjct: 224 -----DPDDICGTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  110 bits (276), Expect = 7e-29
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 9/196 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAK------ELGPNATFIAC 87
           K  LITG +SGIGKA A + +  GA V+I A  + +L +   +        G   ++I+ 
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D++   +V  A    + K    D++ N AG++   P    DL  E F++ M +N  G + 
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS--IPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
                  +M  +R G I+  +S   L+G      Y  SK A+ GL +S+  EL  Y IR+
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179

Query: 208 NCISPFAIPTPFVMEE 223
           + + P    TP   EE
Sbjct: 180 SVVYPPDTDTPGFEEE 195

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  110 bits (277), Expect = 7e-29
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 28/263 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKE---LGPNATFIAC 87
              KVAL+TG++ GIGKA A +    G  + +   +  +  ++TA+E   LG  A  +  
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +V     + +       +  +LD+  NNA  A    R  ++L    +D  M IN + ++ 
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNA--ASGVLRPAMELEESHWDWTMNINAKALLF 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY-SVSKSAIIGLVKSMAAELCEYGIR 206
             + + ++M     G I+  +S+ G +  L  +T   VSK+A+  L + +A EL   GI 
Sbjct: 120 CAQEAAKLMEKVGGGKIISLSSL-GSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIA 178

Query: 207 INCISPFAIPTPFV-----MEEMSQIYAG-VDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           +N +S  A+ T  +      EE+ +       A R++E              P D+ANA 
Sbjct: 179 VNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVE--------------PEDVANAV 224

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
           L+L S +A  + G  ++VDGG +
Sbjct: 225 LFLCSPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 8e-29
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPN 81
           +S     L  + AL+TG++ GIG A A      GA+V++           A+ L   G +
Sbjct: 1   MSLNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLS 60

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A  +A DVT    V  A+D   ++   +DI+ NNAG+  +TP  + D   + F++++R N
Sbjct: 61  AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTP--LEDFPADAFERLLRTN 118

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +  V    +   R MI R +G I+  ASV   L       Y+ +K A+  L K MA +  
Sbjct: 119 ISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWA 178

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           ++G++ N I+P    TP      + + A  + S  LE         G   +  ++  A +
Sbjct: 179 KHGLQCNAIAPGYFDTPL----NAALVADPEFSAWLE----KRTPAGRWGKVEELVGACV 230

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +LASD + +V+GH L VDGG T+
Sbjct: 231 FLASDASSFVNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  108 bits (273), Expect = 3e-28
 Identities = 79/262 (30%), Positives = 124/262 (47%), Gaps = 20/262 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L+ +VALITG  SG+G+A   +F++ GAKV + D   +   +   + G     +  DV 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVR 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLE----VFDQVMRINVRGVV 146
             +D   AV   + +  +LD    NAG+      S+VD+  E     FD++  INV+G +
Sbjct: 61  SLADNERAVARCVERFGKLDCFIGNAGI-WDYSTSLVDIPEEKLDEAFDELFHINVKGYI 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            G K +   +     G ++ T S  G   G     Y+ SK A++GLVK +A EL  + IR
Sbjct: 120 LGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IR 177

Query: 207 INCISPFAIPTPFV------MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           +N ++P  + T           E S     +    L +++ S   L G   EP D   A 
Sbjct: 178 VNGVAPGGMVTDLRGPASLGQGETS-----ISTPPLDDMLKSILPL-GFAPEPEDYTGAY 231

Query: 261 LYLAS-DDAKYVSGHNLVVDGG 281
           ++LAS  D +  +G  +  DGG
Sbjct: 232 VFLASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 3e-28
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 21/254 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVT 90
           KVA++TGA+ GIG A A +  ++G  V +          +   E+   G  A  +  DV 
Sbjct: 6   KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVA 65

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + V+   D   +   ++D++ NNAGV       I D +LE FD+ +  N+RG    ++
Sbjct: 66  DAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT--IADFDLEDFDRTIATNLRGAFVVLR 123

Query: 151 HSTRVMIPRRSGCI--LCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + R +   + G I  L T+ +   L G     Y+ SK+A+ GLV  +A EL   GI +N
Sbjct: 124 EAARHL--GQGGRIINLSTSVIALPLPGYG--PYAASKAAVEGLVHVLANELRGRGITVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            ++P  + T       S        +  ++ +     LE     P +IA A  +LA  D 
Sbjct: 180 AVAPGPVATELFFNGKS--------AEQIDQLAGLAPLE-RLGTPEEIAAAVAFLAGPDG 230

Query: 269 KYVSGHNLVVDGGF 282
            +V+G  L V+GGF
Sbjct: 231 AWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  108 bits (271), Expect = 6e-28
 Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI--------ADIQHQLGQQTAKELGPNATFIA 86
           K ALITGA+SGIG   A +    G  +++          +  +L  +T  E       I 
Sbjct: 7   KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE----VEVIP 62

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D++    +    D    +   +D++ NNAG    T    ++L+L+  ++++++N+  + 
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFG--TFGPFLELSLDEEEEMIQLNILALT 120

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              K     M+ R +G I+   S  GL+       YS +K+ ++   +++  EL   G++
Sbjct: 121 RLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVK 180

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLE 238
           +  + P    T F   + S +Y       +L 
Sbjct: 181 VTAVCPGPTRTEFFDAKGSDVYLLSPGELVLS 212

Length = 265

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  107 bits (269), Expect = 8e-28
 Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 39/266 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------QQTA---K 76
           L  KVA +TGA+ GIG+A A +    GA VV+A      G            ++TA   +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 77  ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQ 136
             G  A  I  DV  E  V   V+ T+ +  +LDI+ NNAG    +   + D   + FD 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS--LVEDTPAKRFDL 118

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
           + R+N+RG     + +   M+    G IL  +    L        Y+  K+ +  L   +
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 197 AAELCEYGIRINCISP-FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           AAEL  +GI +N + P  AI TP      +++  G D +R                   +
Sbjct: 179 AAELRRHGIAVNSLWPSTAIETP----AATELSGGSDPAR---------------ARSPE 219

Query: 256 I-ANAALYLASDDAKYVSGHNLVVDG 280
           I ++A L + S  A   +G  +V+D 
Sbjct: 220 ILSDAVLAILSRPAAERTG-LVVIDE 244

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 9e-28
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 11/193 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDV 89
           L+ KVALITG + GIG A A   ++ G KV I     +  ++ A EL    N   +A DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             E+DV  AVD  ++    LD++  NAGV    P  + +L  E +  V+  N+ G    I
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAP--VEELTPEEWRLVIDTNLTGAFYTI 121

Query: 150 KHSTRVMIPRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           K +   +  R  G I+  +S+ G     GG A   Y+ SK  ++G  ++   +L +YGI+
Sbjct: 122 KAAVPAL-KRGGGYIINISSLAGTNFFAGGAA---YNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 207 INCISPFAIPTPF 219
           ++ I P ++ T F
Sbjct: 178 VSTIMPGSVATHF 190

Length = 237

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 7e-27
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 13/253 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K  LITG+A GIG   A      GA+++I DI  +  +    +L   G  A     +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT + +V  A++        +D++ NNAG+  + P    +   + ++ V+ +N   V   
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHP--FTEFPEQEWNDVIAVNQTAVFLV 124

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +   R M+ R++G I+   S+   LG      Y+ SK A+  L + M  EL  + I++N
Sbjct: 125 SQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVN 184

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I+P    T     EM++  A V+       +           +P ++  AA++L+S  +
Sbjct: 185 GIAPGYFKT-----EMTK--ALVEDEAFTAWLCKR-TPAARWGDPQELIGAAVFLSSKAS 236

Query: 269 KYVSGHNLVVDGG 281
            +V+GH L VDGG
Sbjct: 237 DFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 8e-27
 Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 16/267 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAK--ELGPNATFIAC 87
           +L+++VA++TGA  G+G A A  F   GA V+IA   + QL +   +    G  A  +A 
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+      +      +    +LDI+ NN G     P  ++  + +        NV    A
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGT--MPNPLLSTSTKDLADAFTFNVATAHA 124

Query: 148 GIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
               +  +M+     G ++  +S  G L G     Y  +K+A+    +  A +LC   IR
Sbjct: 125 LTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-IR 183

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I+P +I T        ++ A  D  R   +  +T +      +P DIA AA+YLAS 
Sbjct: 184 VNAIAPGSILT-----SALEVVAANDELRA-PMEKATPL--RRLGDPEDIAAAAVYLASP 235

Query: 267 DAKYVSGHNLVVDGGFTSFKNLKLPAP 293
              Y++G  L VDGG T F NL LP P
Sbjct: 236 AGSYLTGKTLEVDGGLT-FPNLDLPIP 261

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  104 bits (262), Expect = 8e-27
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 5/191 (2%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ KVAL+TGA+SGIG+ATA    + GA V IA  +    +  A EL   G  A  +  D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E  V  AV+ T+    +LDI+ NNAG+    P  + D +   + +++  N+ G++  
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLMYT 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
              +    + R  G I+  +SV G +       Y+ +K  +    + +  E+ E G+R+ 
Sbjct: 119 THAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVV 178

Query: 209 CISPFAIPTPF 219
            I P  + T  
Sbjct: 179 VIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 8e-27
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 20/251 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVTKES 93
           K AL+TGA  GIG+AT       GA+VV ++  Q  L     +E  P    +  D+   S
Sbjct: 8   KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADL-DSLVREC-PGIEPVCVDL---S 62

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           D  DA +  +     +D++ NNA VA   P   +++  E FD+   +NVR V+   +   
Sbjct: 63  D-WDATEEALGSVGPVDLLVNNAAVAILQP--FLEVTKEAFDRSFDVNVRAVIHVSQIVA 119

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
           R MI R     +   S       L  HT Y  +K+A+  L K MA EL  + IR+N ++P
Sbjct: 120 RGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP 179

Query: 213 FAIPTPFVMEEMSQI-YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
                  VM +M +  ++  + ++ +       +  G   E  D+ NA L+L SD +   
Sbjct: 180 -----TVVMTDMGRDNWSDPEKAKKM----LNRIPLGKFAEVEDVVNAILFLLSDKSSMT 230

Query: 272 SGHNLVVDGGF 282
           +G  L VDGGF
Sbjct: 231 TGSTLPVDGGF 241

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  108 bits (273), Expect = 1e-26
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATF 84
                  K+ ++TGA SGIG+ TA  F   GA+VV +DI     ++TA+     G  A  
Sbjct: 309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHA 368

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
              DV+    +    ++  ++H   DI+ NNAG+        +D + E +D+V+ +N+ G
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGG--FLDTSAEDWDRVLDVNLWG 426

Query: 145 VVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           V+ G +   R M+ R   G I+  AS        +   Y+ SK+A++ L + + AEL   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDA 233
           GI +  I P  + T  V    +  +AG DA
Sbjct: 487 GIGVTAICPGFVDTNIV---ATTRFAGADA 513

Length = 582

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  102 bits (256), Expect = 4e-26
 Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTK 91
           V +ITGA+SGIG+ATA  F   GAKVV+A    +  H+L  +  +ELG  A  +  DV  
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHEL-AREVRELGGEAIAVVADVAD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + V  A D  + +  ++D   NNAGVA        D+  E F +V  +N  G V G   
Sbjct: 61  AAQVERAADTAVERFGRIDTWVNNAGVA--VFGRFEDVTPEEFRRVFDVNYLGHVYGTLA 118

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG--IRINC 209
           +   +  R  G ++   S+ G      Q  YS SK A+ G  +S+ AEL   G  I +  
Sbjct: 119 ALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTL 178

Query: 210 ISPFAIPTPFV 220
           + P A+ TPF 
Sbjct: 179 VQPTAMNTPFF 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 7e-26
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 24/259 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT---AKELGPNATFIACD 88
           L  KVA+ITG  +G+G+  A      GA +V   +      +T    + LG    FI  D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIV--GVGVAEAPETQAQVEALGRKFHFITAD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           + ++ D+   V   +     +DI+ NNAG+  +  + +++   + +D V+ IN + V   
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFL 121

Query: 149 IKHSTRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +   +  + + +G  I+  AS+    GG+   +Y+ SKSA++GL +++A EL +Y I +
Sbjct: 122 SQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINV 181

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE----PNDIANAALYL 263
           N I+P  + T    +  + + A  D +R      +  +LE         P+D+A  A++L
Sbjct: 182 NAIAPGYMAT----DNTAALRA--DTAR------NEAILERIPASRWGTPDDLAGPAIFL 229

Query: 264 ASDDAKYVSGHNLVVDGGF 282
           +S  + YV+G+ L VDGG+
Sbjct: 230 SSSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  101 bits (255), Expect = 1e-25
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 33/271 (12%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
           +   +L  K AL+TG   GIG AT A+ +  GA+VV         +    +L     F+A
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDLPEGVEFVA 55

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP----RSIVD------LNLEVFDQ 136
            D+T     +      + +   +DI+ +  G     P     ++ D      LNL +   
Sbjct: 56  ADLTTAEGCAAVARAVLERLGGVDILVHVLG-GSSAPAGGFAALTDEEWQDELNLNLLAA 114

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKS 195
           V R++ R ++ G       MI R SG I+   S+   L      T Y+ +K+A+    KS
Sbjct: 115 V-RLD-RALLPG-------MIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKS 165

Query: 196 MAAELCEYGIRINCISPFAIPTP---FVMEEMSQIYAGVDASRLLELVYST--GVLEGTH 250
           ++ E+   G+R+N +SP  I T     + E +++  AG D     +++  +  G+  G  
Sbjct: 166 LSKEVAPKGVRVNTVSPGWIETEAAVALAERLAE-AAGTDYEGAKQIIMDSLGGIPLGRP 224

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
            EP ++A    +LASD A  ++G   V+DGG
Sbjct: 225 AEPEEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 3e-25
 Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 15/258 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L++KV ++TG ASGIG A + +    GA  VI   +     + A+EL    P A F+  
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAEFVQV 62

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN--LEVFDQVMRINVRGV 145
           D+T ++   DAV+ T++K  ++D + NNAGV        V L    E F   +  N+   
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDG-----VGLEAGREAFVASLERNLIHY 117

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
                +    +   R G I+  +S T L G      Y+ +K A + L +  A  L + G+
Sbjct: 118 YVMAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGV 176

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N + P  + TP      + I    D    L  + +   L        +IA+ A++L S
Sbjct: 177 RVNAVIPAEVMTPLY---ENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS 233

Query: 266 DDAKYVSGHNLVVDGGFT 283
           + + + +G  L VDGG+ 
Sbjct: 234 ERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 35/258 (13%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVT 90
           +  +  L+TGA  GIG A + +  + G +V+ IA        ++A +  P     ACD+ 
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIA--------RSAIDDFP-GELFACDLA 51

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
              + + A    I++ + +D + NN G+A   P+ +  ++L     V  +NVR  V   +
Sbjct: 52  DI-EQTAATLAQINEIHPVDAIVNNVGIA--LPQPLGKIDLAALQDVYDLNVRAAVQVTQ 108

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
                M  R  G I+   S   + G L + +YS +KSA++G  ++ A EL EYGI +N +
Sbjct: 109 AFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167

Query: 211 SPFAIPT-------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           +P  I T       P   EE  ++ A +   RL           GT   P ++A A  +L
Sbjct: 168 APGPIETELFRQTRPVGSEEEKRVLASIPMRRL-----------GT---PEEVAAAIAFL 213

Query: 264 ASDDAKYVSGHNLVVDGG 281
            SDDA +++G  L VDGG
Sbjct: 214 LSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  100 bits (252), Expect = 4e-25
 Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 48/285 (16%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ KVA+ITG    +G A A +    GAKV I D   +  +    E+   G  A  +  D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAG-------------VACKTPRSIVDLNLEVFD 135
           V  +  +  A    +      DI+ N AG                +  ++  DL+ E F+
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS------VTGLLGGLAQHTYSVSKSAI 189
            V  +N+ G +   +   + M+ R+ G I+  +S      +T +        YS +K+AI
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPA------YSAAKAAI 181

Query: 190 IGLVKSMAAELCEYGIRINCISP-FAIPTPFVMEEMSQIYAGVDAS---RLLELVYSTGV 245
               + +A    + GIR+N I+P F     F+ E+   +    D S   R      +  +
Sbjct: 182 SNFTQWLAVHFAKVGIRVNAIAPGF-----FLTEQNRALLFNEDGSLTER------ANKI 230

Query: 246 LEGTHC----EPNDIANAALYLASDDA-KYVSGHNLVVDGGFTSF 285
           L  T      +P ++    L+LA + A  +V+G  L VDGGF+++
Sbjct: 231 LAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAY 275

Length = 278

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 6e-25
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNATF 84
           LE KVAL+TGA+SG+G   A      GAKVV+A  +     +  KEL       G  A  
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR----VERLKELRAEIEAEGGAAHV 62

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           ++ DVT    +  AV    ++   +DI+ NN+GV+  T + +VD+    FD V   N RG
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS--TTQKLVDVTPADFDFVFDTNTRG 120

Query: 145 VVAGIKHSTRVMIPRRSGC--------ILCTASVTGL--LGGLAQHTYSVSKSAIIGLVK 194
                +   + MI R  G         I+  ASV GL  L  +    Y +SK+A++ + +
Sbjct: 121 AFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG--LYCMSKAAVVHMTR 178

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA-SRLLELVYSTGVLEGTHCEP 253
           +MA E   +GI +N I P  I T     E++  +   +   +L+ ++    V      +P
Sbjct: 179 AMALEWGRHGINVNAICPGYIDT-----EINHHHWETEQGQKLVSMLPRKRV-----GKP 228

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGGF 282
            D+    L LA+D++++++G  +  D GF
Sbjct: 229 EDLDGLLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  102 bits (257), Expect = 1e-24
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 40/258 (15%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI---QHQLGQQTAKELGPNATFIA 86
           R L  KVAL+TGAA GIG A A     +GA VV  D+      L    A  +G   T +A
Sbjct: 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVG--GTALA 262

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVRGV 145
            D+T     +   +    +H  LDI+ +NAG+   T  +++ +++   +D V+ +N+   
Sbjct: 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGI---TRDKTLANMDEARWDSVLAVNLLAP 319

Query: 146 VAGIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +      T  ++        G I+  +S++G+ G   Q  Y+ SK+ +IGLV+++A  L 
Sbjct: 320 LR----ITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA 375

Query: 202 EYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           E GI IN ++P  I T      PF   E         A R +  +   G        P D
Sbjct: 376 ERGITINAVAPGFIETQMTAAIPFATRE---------AGRRMNSLQQGG-------LPVD 419

Query: 256 IANAALYLASDDAKYVSG 273
           +A    +LAS  +  V+G
Sbjct: 420 VAETIAWLASPASGGVTG 437

Length = 450

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 99.7 bits (249), Expect = 1e-24
 Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 41/272 (15%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---------GQQTAKEL---G 79
           L+ +V ++TGA  GIG+A A  F + GA+VV+ DI   L          Q    E+   G
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
             A     D+      ++ VD  +     LD++ NNAG+     R I +++ E +D V+ 
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGIL--RDRMIANMSEEEWDAVIA 121

Query: 140 INVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
           ++++G  A ++H+                 I+ T+S  GL G + Q  YS +K+ I  L 
Sbjct: 122 VHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALT 181

Query: 194 KSMAAELCEYGIRINCISPFAIP--TPFVMEEM--SQIYAGVDASRLLELVYSTGVLEGT 249
              AAEL  YG+ +N I+P A    T  V  EM         DA                
Sbjct: 182 LVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAM--------------- 226

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
              P +++   ++L S +++ V+G    V+GG
Sbjct: 227 --APENVSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.6 bits (246), Expect = 2e-24
 Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 15/194 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKV-VIADIQHQLGQQTAKELGP---NATFIAC 87
           L+ K ALITGA  GIG+A A      G  V ++A  +  L +  A+E+            
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVIATA 63

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+   +V+ A++   ++   +DI+ NNAG++       ++L+   +++++++N+ GV  
Sbjct: 64  DVSDYEEVTAAIEQLKNELGSIDILINNAGIS--KFGKFLELDPAEWEKIIQVNLMGVY- 120

Query: 148 GIKHSTRV----MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              ++TR     MI R+SG I+  +S  G  G      YS SK  ++GL +S+  E+ ++
Sbjct: 121 ---YATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKH 177

Query: 204 GIRINCISPFAIPT 217
            IR+  ++P  + T
Sbjct: 178 NIRVTALTPSTVAT 191

Length = 239

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 2e-24
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 36/266 (13%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT-----FIA 86
            +++  L+TG  SGIGK  AA  ++ GA V+I           A+E+          +  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVT E  V+ AVD   + H +L  + + AG   +T   I  ++ + + + + +NV G +
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAG-GSETIGPITQIDSDAWRRTVDLNVNGTM 123

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT------YSVSKSAIIGLVKSMAAEL 200
             +KH+ R ++    G  +  +S+       A +T      Y V+KSA+  L+K  A EL
Sbjct: 124 YVLKHAARELVRGGGGSFVGISSIA------ASNTHRWFGAYGVTKSAVDHLMKLAADEL 177

Query: 201 CEYGIRINCISPFAIPTPFVM-----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
               +R+N I P  I T  V       E+S  Y    A   L  V           E  D
Sbjct: 178 GPSWVRVNSIRPGLIRTDLVAPITESPELSADYR---ACTPLPRV----------GEVED 224

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +AN A++L SD A +++G  + VDGG
Sbjct: 225 VANLAMFLLSDAASWITGQVINVDGG 250

Length = 276

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 12/248 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKEL---GPNATFIAC 87
           L+ KVAL+TG   G+G A A  F   GA  +VI     + G+  A EL   G  A F+  
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR-SIVDLNLEVFDQVMRINVRGVV 146
           D++   D    V        +LD + N AG+   T R +I+D + E+FD+   +NVR   
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGL---TDRGTILDTSPELFDRHFAVNVRAPF 120

Query: 147 AGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             ++ + ++M  R++ G I+   S++   G      Y  SK A+  L ++ A  L    I
Sbjct: 121 FLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRI 180

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N ++   + T    + + + + G     L +   +     G   +P+++A A  +L S
Sbjct: 181 RVNGLNIGWMATE-GEDRIQREFHGAPDDWLEKAAATQPF--GRLLDPDEVARAVAFLLS 237

Query: 266 DDAKYVSG 273
           D++  ++G
Sbjct: 238 DESGLMTG 245

Length = 260

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 98.5 bits (246), Expect = 4e-24
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           KVA+ITGAASG G A A    + G K+V+AD+Q     +   EL   G     +  DV+ 
Sbjct: 7   KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD 66

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + V    D  + +   + +++NNAGV       + + +L  ++ V+ +N+ GV+ G++ 
Sbjct: 67  AAQVEALADAALERFGAVHLLFNNAGVGAGGL--VWENSLADWEWVLGVNLWGVIHGVRA 124

Query: 152 STRVMI------PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
            T +M+      P   G I+ TAS+ GLL   A   Y+VSK A++ L +++  +L     
Sbjct: 125 FTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTD 184

Query: 206 RINC--ISPFAIPT 217
           ++    + P+ +PT
Sbjct: 185 QVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 96.5 bits (240), Expect = 1e-23
 Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 20/254 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  + AL+TGA+ GIG+  A    + GA V +   + +  +  A ELG        +++ 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             +V        +    +DI+ NNAG+        V ++ E +D V+ +N+       + 
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGIT--KDGLFVRMSDEDWDSVLEVNLTATFRLTRE 121

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            T  M+ RR G I+   SV G+ G   Q  Y  SK+ +IG  KS+A E+    + +NC++
Sbjct: 122 LTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA 181

Query: 212 PFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I +        ++   I   +   R+           GT  E   +A+A  YLAS +
Sbjct: 182 PGFIESAMTGKLNDKQKEAIMGAIPMKRM-----------GTGAE---VASAVAYLASSE 227

Query: 268 AKYVSGHNLVVDGG 281
           A YV+G  + V+GG
Sbjct: 228 AAYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 95.3 bits (237), Expect = 2e-23
 Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 8/188 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K AL+TGA+ GIG+ATA    + G +V I           A +       +A DV  E+D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEAD 60

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V  AVD        LD + NNAGV    P  + +L  E +  V+  N+ G    I  +  
Sbjct: 61  VRRAVDAMEEAFGGLDALVNNAGVGVMKP--VEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 155 VMIPRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            ++ R  G I+   S+ G     GG A   Y+ SK  ++GL ++   +L E  IR+  + 
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAA---YNASKFGLLGLSEAAMLDLREANIRVVNVM 175

Query: 212 PFAIPTPF 219
           P ++ T F
Sbjct: 176 PGSVDTGF 183

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 96.1 bits (239), Expect = 2e-23
 Identities = 68/261 (26%), Positives = 131/261 (50%), Gaps = 16/261 (6%)

Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVV---IADIQHQLGQQTAKELGPNATF 84
           ++  LE KVA++TG  +G+G+  A      G  +V   I +    + Q TA  LG     
Sbjct: 4   DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA--LGRRFLS 61

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  D+ K   +   ++  +++   +DI+ NNAG+  +     ++ + + +D VM +N++ 
Sbjct: 62  LTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKS 119

Query: 145 VVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           V    + + +  I +   G I+  AS+    GG+   +Y+ SKS ++G+ + MA E  ++
Sbjct: 120 VFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKH 179

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            I +N I+P  + T        Q+ A  D  R  E++    +  G    P+D+    ++L
Sbjct: 180 NINVNAIAPGYMAT----NNTQQLRA--DEQRSAEIL--DRIPAGRWGLPSDLMGPVVFL 231

Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           AS  + Y++G+ + VDGG+ +
Sbjct: 232 ASSASDYINGYTIAVDGGWLA 252

Length = 253

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.8 bits (239), Expect = 3e-23
 Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 19/260 (7%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIACDV 89
             VAL+TG   GIG   A    + G  + I D              + LG    F   DV
Sbjct: 2   RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADV 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
              S     +D   +   ++D + NNAGV  K    ++DL  E FD+V+ IN+RG     
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 150 KHSTRVMI------PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           +   + M+            I+  +SV  ++    +  Y +SK+ +    +  AA L E 
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GI +  + P  I T     +M+   A V  ++   L+    V      EP D+A A   L
Sbjct: 182 GIGVYEVRPGLIKT-----DMT---APV-TAKYDALIAKGLVPMPRWGEPEDVARAVAAL 232

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
           AS D  Y +G  + VDGG +
Sbjct: 233 ASGDLPYSTGQAIHVDGGLS 252

Length = 256

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 95.2 bits (237), Expect = 4e-23
 Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADI----QHQLGQQTAKELGPNATFIACDV 89
             VA++TGA+ GIG+A A +  + G  + I D+    Q           G  A +   D+
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADI 60

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG----- 144
            + SD    +D       +LD + NNAG+A +    ++DL  + FD+++ IN+RG     
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 145 -VVAG--IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
             VA   ++   R   P RS  I+   S+   L    +  Y +SK+ +    + +A  L 
Sbjct: 121 QAVARRMVEQPDRFDGPHRS--IIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLA 178

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           + GI ++ I P  I T      + + Y  + A+ L+ +            +P DIA A  
Sbjct: 179 DEGIAVHEIRPGLIHTDMTA-PVKEKYDELIAAGLVPI--------RRWGQPEDIAKAVR 229

Query: 262 YLASDDAKYVSGHNLVVDGGF 282
            LAS    Y +G  + +DGG 
Sbjct: 230 TLASGLLPYSTGQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 94.4 bits (235), Expect = 4e-23
 Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP-NATFIACDVTKES 93
           K   ITGAASGIG+ TA  F  NG  V + DI        A ELG  N    A DVT  +
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 94  DVSDAV-DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
             + A+ DF  +   +LD ++NNAGV    P    D+ L   D+++ INV+GV+ G  ++
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGP--FEDVPLAAHDRMVDINVKGVLNGA-YA 117

Query: 153 TRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               +    G  ++ TAS + + G      YS +K A+ GL +++  E   +GIR+  + 
Sbjct: 118 ALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVW 177

Query: 212 PFAIPTPFV 220
           P+ + TP +
Sbjct: 178 PWFVDTPIL 186

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 94.5 bits (235), Expect = 6e-23
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 34/263 (12%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ----QTAKELGPNATFIACDVT 90
           KV +ITGA+ GIG ATA      G  V +  ++++       Q  +  G  A  +A DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 91  KESDVS---DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
            E+DV    +AVD  + +   LD + NNAG+     R +  ++     ++   NV G   
Sbjct: 63  DEADVLRLFEAVDRELGR---LDALVNNAGILEAQMR-LEQMDAARLTRIFATNVVGSFL 118

Query: 148 GIKHSTRVMIPR---RSGCILCTASVTGLLGGLAQHT-YSVSKSAI----IGLVKSMAAE 199
             + + + M  R   R G I+  +S+   LG   ++  Y+ SK AI    IGL K +AAE
Sbjct: 119 CAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE 178

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIAN 258
               GIR+N + P  I T        +I+A G +  R+  +    G+  G      ++A 
Sbjct: 179 ----GIRVNAVRPGVIYT--------EIHASGGEPGRVDRV--KAGIPMGRGGTAEEVAR 224

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           A L+L SD+A Y +G  + V GG
Sbjct: 225 AILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.0 bits (234), Expect = 9e-23
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 17/254 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQT---AKELGPNATFIAC 87
           L++KV ++TG+  GIG+A A +    G+ VV+ A  + +   +T    KE G     +  
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+           TI ++   DI+ NNAG+   +P   VD  L   D+ +  + + V+ 
Sbjct: 64  DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKL--IDKHISTDFKSVIY 121

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             +   + M  R  G I+  ASV G+        Y   K+A+I L K +A EL    IR+
Sbjct: 122 CSQELAKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK-IRV 178

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I+P  + T   + E      G+      E       L G   +P ++A     +   +
Sbjct: 179 NAIAPGFVKTK--LGESLFKVLGMSEKEFAEKF----TLMGKILDPEEVAEFVAAILKIE 232

Query: 268 AKYVSGHNLVVDGG 281
           +  ++G   V+D G
Sbjct: 233 S--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 94.1 bits (234), Expect = 1e-22
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG A A +    G +V +     +    T KEL   G  A    CDV
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS----IVDLNLEVFDQVMRINVRGV 145
               ++   V   ++++  +D++ NNAG      RS      +L  E++  V+  N+ GV
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAG------RSGGGATAELADELWLDVVETNLTGV 115

Query: 146 VAGIKHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
               K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   
Sbjct: 116 FRVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 175

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAAL 261
           GI +N + P  + TP     + + YA +      E     +  V  G +  P ++A    
Sbjct: 176 GITVNAVCPGFVETPMA-ASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVA 234

Query: 262 YLASDDAKYVSGHNLVVDGGFTSF 285
           YL  D A  V+   L V GG  ++
Sbjct: 235 YLIGDGAAAVTAQALNVCGGLGNY 258

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 93.7 bits (233), Expect = 1e-22
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 31/261 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--CDVTKE 92
           K+ L+TG + GIG+  A  F+  GA+V+I+  + +     A+EL      IA   D++ E
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADLSSE 66

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
             +   V     + ++LD++ NNAG     P  +       +D+VM INV+ V       
Sbjct: 67  EGIEALVARVAERSDRLDVLVNNAGATWGAP--LEAFPESGWDKVMDINVKSVFF----L 120

Query: 153 TRVMIP--RRSGC------ILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           T+ ++P  R +        ++   S+ G++  GL  ++Y  SK+A+  L + +A EL   
Sbjct: 121 TQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGE 180

Query: 204 GIRINCISPFAIP---TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            I +N I+P   P   T F++ +        + S          +  G    P D+A  A
Sbjct: 181 HITVNAIAPGRFPSKMTAFLLND-PAALEAEEKS----------IPLGRWGRPEDMAGLA 229

Query: 261 LYLASDDAKYVSGHNLVVDGG 281
           + LAS    Y++G  + VDGG
Sbjct: 230 IMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 9/198 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKEL---GPNATFI 85
           + +  +V +ITGA++G+G+ATA  F   GAKVV +A  +  L +  A E+   G  A  +
Sbjct: 4   KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEALAV 62

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV     V  A D    +   +D   NNA V    P    D+  E F +V  +   GV
Sbjct: 63  VADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGP--FEDVTPEEFRRVTEVTYLGV 120

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG- 204
           V G   + R M PR  G I+   S         Q  Y  +K AI G   S+  EL   G 
Sbjct: 121 VHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGS 180

Query: 205 -IRINCISPFAIPTPFVM 221
            + +  + P A+ TP   
Sbjct: 181 PVSVTMVQPPAVNTPQFD 198

Length = 334

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKEL---GPNATFIACD 88
           KVAL+TGA  GIG     +   +G   VI    D++   GQ   ++L   G +  F   D
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVE--RGQAAVEKLRAEGLSVRFHQLD 58

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT ++ +  A DF   K+  LDI+ NNAG+A K          E   + M+ N  G V  
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKG-FDDSTPTREQARETMKTNFFGTVDV 117

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +    ++    +G I+  +S  G L       Y VSK+A+  L + +A EL E GI++N
Sbjct: 118 TQALLPLLKKSPAGRIVNVSSGLGSL----TSAYGVSKAALNALTRILAKELKETGIKVN 173

Query: 209 CISP 212
              P
Sbjct: 174 ACCP 177

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 93.0 bits (232), Expect = 2e-22
 Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 32/256 (12%)

Query: 41  GAASGIGKATAAKFISNGAKVVI--ADIQHQLG--QQTAKELGPNATFIACDVTKESDVS 96
              + I  A A      GA+VV+       ++G   + AKEL   A  I  DVT + D+ 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP--ADVIPLDVTSDEDID 60

Query: 97  DAVDFTISKHNQLDIMYNNAGVA---CKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           +  +       ++D + ++  ++    K    + D + E F + + I+    ++  K + 
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYL-DTSREGFLKALDISAYSFISLAKAAK 119

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHT------YSVSKSAIIGLVKSMAAELCEYGIRI 207
            +M            S+  L    A+          V+K+A+  L + +A EL   GIR+
Sbjct: 120 PLMNE--------GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRV 171

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N IS     T       S I  G D    +          G +    ++ANAA +L SD 
Sbjct: 172 NTISAGPTKTT----AGSGI-GGFDK---MVEYAEEMAPLGRNASAEEVANAAAFLLSDL 223

Query: 268 AKYVSGHNLVVDGGFT 283
           A+ ++G  L VDGGF+
Sbjct: 224 ARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 92.7 bits (231), Expect = 4e-22
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 11/189 (5%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE 92
             KVAL+TGA+SGIG+ATA K    G +V          +       P    +  DVT +
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF--GTSRNPARAAPI---PGVELLELDVTDD 57

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           + V  AVD  I++  ++D++ NNAGV  A     S +     +FD     NV G++   +
Sbjct: 58  ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFD----TNVFGILRMTR 113

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
                M  + SG I+  +SV G L       Y+ SK A+ G  +S+  E+ ++GIR++ +
Sbjct: 114 AVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLV 173

Query: 211 SPFAIPTPF 219
            P    T F
Sbjct: 174 EPAYTKTNF 182

Length = 270

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 92.3 bits (230), Expect = 4e-22
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 23/239 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATFIAC-DVT 90
           K  LITGA+SGIG+ATA +F   GAK+++   + +  Q+ A ELG   P        DV+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +  A++    +   +DI+ NNAG+A        + +LE ++ ++  NV+G++   +
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLD-PAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 151 HSTRVMIPRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
               +MI R  G I+   S+ G     GG   + Y  +K+A+     ++  +L   GIR+
Sbjct: 120 LILPIMIARNQGHIINLGSIAGRYPYAGG---NVYCATKAAVRQFSLNLRKDLIGTGIRV 176

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-CEPNDIANAALYLAS 265
             I P  + T F     S +    D  +      +  V EG     P DIA   L++AS
Sbjct: 177 TNIEPGLVETEF-----SLVRFHGDKEK------ADKVYEGVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 91.9 bits (228), Expect = 5e-22
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 24/252 (9%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIACDVTKES 93
           L+TGA+ GIG+A A +  ++G ++ +     +   ++     +  G NA  +  DV    
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
                ++  I++H     +  NAG+      +   L+ E +D V+  N+ G    I   T
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGIT--RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119

Query: 154 RVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
             MI  R+ G I+  ASV+G++G   Q  YS +K+ +IG  K++A EL +  I +NCI+P
Sbjct: 120 MPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179

Query: 213 FAIPTPFVMEE---MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
             I T  + E    + +    V  +R+               +P ++A+ A +L SD A 
Sbjct: 180 GLIDTEMLAEVEHDLDEALKTVPMNRM--------------GQPAEVASLAGFLMSDGAS 225

Query: 270 YVSGHNLVVDGG 281
           YV+   + V+GG
Sbjct: 226 YVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 91.6 bits (228), Expect = 1e-21
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLG--QQTAKELGPNATFIACDVTK 91
           K  LITGA SG G+  A +    G  V+    I  Q+   +  A   G        D+T 
Sbjct: 3   KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD 62

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             D + A ++ +      D++ NNAG+      ++VD+ +E+  ++   NV G +   + 
Sbjct: 63  AIDRAQAAEWDV------DVLLNNAGIG--EAGAVVDIPVELVRELFETNVFGPLELTQG 114

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ R  G ++ T+S+ GL+ G     Y  SK A+  + ++M AEL  +GI++  ++
Sbjct: 115 FVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVN 174

Query: 212 PFAIPTPF 219
           P    T F
Sbjct: 175 PGPYLTGF 182

Length = 257

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 5/185 (2%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKELGPNATFIA--CDVTKES 93
            LITGA+SGIG+A A +F   G  V +A  +  +L +  A+ L PN +      DVT E 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
                +    ++   LD++  NAGV      S+ DL+ + F + +  N+ G  A ++ + 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVG--KGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
                +  G ++  +SV  L G      YS SK+A+  L +S+  ++ + GIR+  I+P 
Sbjct: 119 PQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPG 178

Query: 214 AIPTP 218
            I TP
Sbjct: 179 FIDTP 183

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 91.2 bits (226), Expect = 2e-21
 Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKES 93
           A+ITG ASGIG AT  +F   GA+VV+ D+     +Q    L   G +   + CDV    
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE 68

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           +V+   D        +D++++NAG+    P  IV++  + +  V+ +++ G +    H+ 
Sbjct: 69  EVTHLADEAFRLLGHVDVVFSNAGIVVGGP--IVEMTHDDWRWVIDVDLWGSI----HTV 122

Query: 154 RVMIPR-----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
              +PR       G ++ TAS  GL+       Y V+K  ++GL +++A E+   GI ++
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182

Query: 209 CISPFAIPTPFV 220
            + P  + T  V
Sbjct: 183 VLCPMVVETNLV 194

Length = 275

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 90.2 bits (224), Expect = 2e-21
 Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 60/274 (21%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           +ITGAASGIG ATA      G  V+  D++                 +  D++     + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE--------------ADVIADLSTPEGRAA 48

Query: 98  AV-DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
           A+ D        LD + N AGV   T              V+++N  G+ A ++     +
Sbjct: 49  AIADVLARCSGVLDGLVNCAGVGGTTV----------AGLVLKVNYFGLRALMEALLPRL 98

Query: 157 IPRRSGCILCTASVTG-------------LLGG-------LAQH-------TYSVSKSAI 189
                   +  +S+ G             L  G       LA+H        Y+ SK A+
Sbjct: 99  RKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEAL 158

Query: 190 IGLVKSMAAE-LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG 248
               +  AA  L   G+R+N ++P  + TP +++   Q   G ++              G
Sbjct: 159 TVWTRRRAATWLYGAGVRVNTVAPGPVETP-ILQAFLQDPRGGESVDAFVTPM------G 211

Query: 249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
              EP++IA    +LASD A +++G NL VDGG 
Sbjct: 212 RRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 21/230 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           KVAL+TGA+ GIG   A     +G +V +     +     +   G +   +  D     D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS-GGDVEAVPYDARDPED 59

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
               VD    +  ++D++ +NAG+   T   + + +    +    INV       +    
Sbjct: 60  ARALVDALRDRFGRIDVLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAELTRALLP 117

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
            +    SG ++   S++G    LA +  YS SK A+  L  ++  E  ++G+R++ + P 
Sbjct: 118 ALREAGSGRVVFLNSLSGK-RVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 214 AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            + TP     M+Q    V A    E++           +P DIAN    +
Sbjct: 177 FVDTP-----MAQGLTLVGAFPPEEMI-----------QPKDIANLVRMV 210

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 90.2 bits (224), Expect = 3e-21
 Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 11/193 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ +V L+TG ASG+G+A   +F++ GA+V + D      Q+     G     +  DV 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVR 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGV------ACKTPRSIVDLNLEVFDQVMRINVRG 144
              D  +AV   ++   ++D +  NAG+          P   +D   E FD+V  INV+G
Sbjct: 62  SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRID---EAFDEVFHINVKG 118

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
            +  +K +   ++  R   I  T S  G         Y+ +K A++GLVK +A EL  Y 
Sbjct: 119 YLLAVKAALPALVASRGSVIF-TISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY- 176

Query: 205 IRINCISPFAIPT 217
           +R+N ++P  + +
Sbjct: 177 VRVNGVAPGGMSS 189

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 88.8 bits (221), Expect = 7e-21
 Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-----QLGQQTAKELG---PNATF 84
             KVALITG A  IG A A    + G +V I    H           A EL    P +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAI----HYHRSAAEADALAAELNALRPGSAA 60

Query: 85  IAC-DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
               D+     + + V   ++   +LD + NNA     TP  +  +    +D +   N++
Sbjct: 61  ALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTP--LGSITEAQWDDLFASNLK 118

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--LAQHT-YSVSKSAIIGLVKSMAAEL 200
                +  +    + ++ G I+   ++T +     L  +  Y  +K+A+  L +S+A EL
Sbjct: 119 APFF-LSQAAAPQLRKQRGAIV---NITDIHAERPLKGYPVYCAAKAALEMLTRSLALEL 174

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
               +R+N ++P AI  P    E    +       +L     T         P DIA A 
Sbjct: 175 AP-EVRVNAVAPGAILWP----EDGNSFDEEARQAILA---RT--PLKRIGTPEDIAEAV 224

Query: 261 LYLASDDAKYVSGHNLVVDGG 281
            +L   DA +++G  L VDGG
Sbjct: 225 RFLL-ADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 88.7 bits (220), Expect = 9e-21
 Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 46/275 (16%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           + E KV ++TGAA GIG+  A +    GA+V++ D   +L  +   E+   G  A     
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAAGDAAHVHTA 59

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+   +     V   + +  ++D++ NN G       +I     E +++        + A
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVG------GTIWAKPYEHYEE------EQIEA 107

Query: 148 GIKHS-------TRV----MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
            I+ S        R     M+ R+ G I+  +S+     G+ +  YS +K  +  L  S+
Sbjct: 108 EIRRSLFPTLWCCRAVLPHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASL 165

Query: 197 AAELCEYGIRINCISPFAIPTP--------FVMEEMSQIYAG--VDASRLLELVYSTGVL 246
           A E    GIR+N ++P     P          M E  +++    VD +    L+   G +
Sbjct: 166 AFEHARDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTI 225

Query: 247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
           +       +   A L+LASD+A Y++G  L V GG
Sbjct: 226 D-------EQVRAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL     LITG  SGIG A A KF+  G  V+I   + +   +  KEL PN   I  DV 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL-PNIHTIVLDVG 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDL--NLEVFDQVMRINVRGVVAG 148
               V    +  +S++  LDI+ NNAG+  + P  + D   +L+  D  +  N+ G +  
Sbjct: 61  DAESVEALAEALLSEYPNLDILINNAGI--QRPIDLRDPASDLDKADTEIDTNLIGPI-- 116

Query: 149 IKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                +  +P    +    I+  +S    +   A   Y  +K+A+     ++  +L + G
Sbjct: 117 --RLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 205 IRINCISPFAIPTP 218
           + +  I P A+ T 
Sbjct: 175 VEVVEIVPPAVDTE 188

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 87.6 bits (217), Expect = 2e-20
 Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 23/254 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIACDVT 90
           +VAL+TGA+ GIG A A   + +G KVV      D    L  +      P      CD++
Sbjct: 7   RVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLS 66

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E  +        ++H  +D+  NNAG+A   P  ++    E + ++  +NV  +    +
Sbjct: 67  NEEQILSMFSAIRTQHQGVDVCINNAGLA--RPEPLLSGKTEGWKEMFDVNVLALSICTR 124

Query: 151 HSTRVMIPRR--SGCILCTASVTG--LLGGLAQHTYSVSKSAIIGLVKSMAAELCEY--G 204
            + + M  R    G I+   S++G  +      H Y+ +K A+  L + +  EL E    
Sbjct: 125 EAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTH 184

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR   ISP  + T F  +         D  +      S   L     +P D+ANA LY+ 
Sbjct: 185 IRATSISPGLVETEFAFK-----LHDNDPEKAAATYESIPCL-----KPEDVANAVLYVL 234

Query: 265 SDDAKYVSGHNLVV 278
           S    +V  H++++
Sbjct: 235 STPP-HVQIHDILL 247

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 88.4 bits (219), Expect = 3e-20
 Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 24/260 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNAT 83
           +L+ + ALITGA SGIG+ATA  F   GA + +  +  +  +Q A E+       G  A 
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEE--EQDAAEVVQLIQAEGRKAV 109

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAG--VACKTPRSIVDLNLEVFDQVMRIN 141
            +  D+  E+     V+  + +   LDI+ N AG   A K    I D+  E FD   + N
Sbjct: 110 ALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVK---DIADITTEQFDATFKTN 166

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           V  +    K +   + P  S  I+ T S+           Y+ +K+AI+   K++A ++ 
Sbjct: 167 VYAMFWLCKAAIPHLPPGAS--IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVA 224

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           E GIR+N ++P  + TP       Q   G    ++ +    T +      +P ++A   +
Sbjct: 225 EKGIRVNAVAPGPVWTPL------QPSGGQPPEKIPDFGSETPM--KRPGQPVEMAPLYV 276

Query: 262 YLASDDAKYVSGHNLVVDGG 281
            LAS ++ YV+G    V GG
Sbjct: 277 LLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 40/265 (15%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIAC---DVTK 91
           KV +ITG +SG+GKA A +F   GA VVI     +  ++   E+      +     DV  
Sbjct: 2   KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAG--VACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             DV   V+    K  ++D + NNA     C       DL++  ++ V+ I    V+ G 
Sbjct: 62  PEDVQKMVEQIDEKFGRIDALINNAAGNFICPAE----DLSVNGWNSVIDI----VLNGT 113

Query: 150 KHSTRVMIPR-----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL-CEY 203
            + ++ +          G I+   +      G      + +K+ ++ + +++A E   +Y
Sbjct: 114 FYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKY 173

Query: 204 GIRINCISPFAIPTP------FVMEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           GIR+N I+P  I         +  EE   +    V   RL           GT   P +I
Sbjct: 174 GIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRL-----------GT---PEEI 219

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A  A +L SD+A Y++G  + +DGG
Sbjct: 220 AGLAYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.9 bits (218), Expect = 5e-20
 Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 28/267 (10%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKE---LGPN 81
           +T +  L  KVA++TGAA+G+G+A A      GA VV+ D+   L       E    G  
Sbjct: 4   TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK 63

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A  +A D+++ +  +D +  T      LDI+ NNAG+     R + +++ E +D V+ ++
Sbjct: 64  AVAVAGDISQRA-TADELVATAVGLGGLDIVVNNAGIT--RDRMLFNMSDEEWDAVIAVH 120

Query: 142 VRGVVAGIKHSTRVMIPRRS-------GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           +RG     +++      +         G I+ T+S  GL+G + Q  Y  +K+ I  L  
Sbjct: 121 LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTL 180

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
           S A  L  YG+R N I P A          + + A V        V + G+       P 
Sbjct: 181 SAARALGRYGVRANAICPRA---------RTAMTADVFGD--APDVEAGGI---DPLSPE 226

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
            +     +LAS  A  V+G   +V G 
Sbjct: 227 HVVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 86.2 bits (213), Expect = 7e-20
 Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 22/263 (8%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKELGPN---ATFI 85
           + L+ KVAL+TGA+ GIG+A A +  ++GA V I      Q   +T +E+  N   A  I
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 86  ACDVTKESDVSDAVDFTISK------HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
             D+     V   V+   ++       +++DI+ NNAG+   T  +I +   E+FD++M 
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG--TQGTIENTTEEIFDEIMA 119

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           +N++     I+ +  ++  R  G ++  +S    LG      Y +SK A+  +   +A  
Sbjct: 120 VNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKH 177

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L E GI +N I P    T    + +       D   +     ++ V  G   +  DIA+A
Sbjct: 178 LGERGITVNTIMPGYTKTDINAKLL-------DDPEIRNFATNSSVF-GRIGQVEDIADA 229

Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
             +LAS D+++V+G  + V GGF
Sbjct: 230 VAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 53/262 (20%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK----------ELGPN 81
           L++++ L+TGA  GIG+  A  +  +GA V++      LG+   K            GP 
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQ 63

Query: 82  ATFIACD---VTKESDVSDAVDFTISKH-NQLDIMYNNAGV-ACKTPRSIVDLNLEVFDQ 136
              I  D    T + +     D TI +   +LD + +NAG+     P  +   + EV+  
Sbjct: 64  PAIIPLDLLTATPQ-NYQQLAD-TIEEQFGRLDGVLHNAGLLGELGP--MEQQDPEVWQD 119

Query: 137 VMRINVRGVVAGIKHSTRVMIP--RRS--GCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
           VM++NV          T+ ++P   +S    ++ T+S  G  G      Y+VSK A  G+
Sbjct: 120 VMQVNVNATFM----LTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGM 175

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEM-SQIYAGVDASRLLELVYSTGVLEGTHC 251
           ++ +A E     +R+NCI+P    T      M +  + G D  +L      T        
Sbjct: 176 MQVLADEYQGTNLRVNCINPGGTRT-----AMRASAFPGEDPQKL-----KT-------- 217

Query: 252 EPNDIANAALYLASDDAKYVSG 273
            P DI    LYL  DD++  +G
Sbjct: 218 -PEDIMPLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 7/208 (3%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTK 91
           VA + GA  G+G A A +F + G  V +A         L     ++ G +A  +  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E +V    D    +   L+++  NAG        I++    VF++V  +   G     + 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI-NCI 210
           + + M+ R  G I+ T +   L G      ++ +K A+  L +SMA EL   GI + + I
Sbjct: 119 AAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHVAHVI 178

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLE 238
               I T F+ E   +     +   +L+
Sbjct: 179 IDGGIDTDFIRERFPKRDERKEEDGILD 206

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIACDVT 90
             ALITGA+SGIGKATA  F   G  + +     D    L     +  G  A   + D++
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEAL-AAELRSTGVKAAAYSIDLS 65

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV---VA 147
               ++  +   + +    D++ NNAG+A   P  ++++ L  +  V+++N+  V    +
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGP--LLEMPLSDWQWVIQLNLTSVFQCCS 123

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +    R    R  G I+  +S+           Y VSK+A+    K +A E   +GIR+
Sbjct: 124 AVLPGMR---ARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRV 180

Query: 208 NCISPFAIPTP 218
             I+  A+ TP
Sbjct: 181 CTITLGAVNTP 191

Length = 241

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 84.8 bits (210), Expect = 3e-19
 Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 20/243 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKV--VIADI-----QHQLGQQTAKELGPNATFIAC 87
            V LITG +SGIG   A +  S+ +K   V A +     + +L +      G     +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV     V+ AV+    +H  +D++  NAGV    P  +  L+ +    V  +NV G V 
Sbjct: 61  DVCDSKSVAAAVERVTERH--VDVLVCNAGVGLLGP--LEALSEDAMASVFDVNVFGTVR 116

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            ++     M  R SG IL T+SV GL G      Y  SK A+ GL +S+A +L  + + +
Sbjct: 117 MLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVHL 176

Query: 208 NCISPFAIPTPF---VMEEMSQI-YAGVDASRLLELVY-----STGVLEGTHCEPNDIAN 258
           + I    + T F   V+    ++     D        Y     S  V       P ++A 
Sbjct: 177 SLIECGPVHTAFMEKVLGSPEEVLDRTADDITTFHFFYQYLAHSKQVFREAAQNPEEVAE 236

Query: 259 AAL 261
             L
Sbjct: 237 VFL 239

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 3e-19
 Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 48/272 (17%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIAD---IQHQLGQQTAKELGPNATFIACDVTK 91
           KV ++TGAA GIG+  A +  + GA+VV+ D   + H++  +     G      A D+  
Sbjct: 9   KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTA-DLET 67

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACK-------TPRSIVDLNLEVFDQVMRI--NV 142
            +    A+   +    ++D++ NN G               I     E+   +       
Sbjct: 68  YAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEA---EIRRSLFPTLWCC 124

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           R V+         M+ +  G I+  +S+     G+ +  YS +K  +  L  S+A E  E
Sbjct: 125 RAVLPH-------MLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYAE 175

Query: 203 YGIRINCISP---FAIP--TPFVMEEMS--------QIYAGVDASRLLELVYSTGVLEGT 249
           +GIR+N ++P    A P   P      S        QI      S L++  Y T      
Sbjct: 176 HGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKR-YGT------ 228

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
               ++   A L+LASD+A Y++G  L V GG
Sbjct: 229 ---IDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 5e-19
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 28/265 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIACD 88
           L+ KV +++G   G+G+  A +    GA VV+A    +   + A E   LG  A  +  D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +T E   ++ V   + +  ++D + NNA     + + + D +   +  V+ +NV G +  
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNA-FRVPSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +  T  +     G I+   S+           Y ++K A++   +S+A EL   GIR+N
Sbjct: 122 TQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180

Query: 209 CISPFAIPTP-------FVMEE----MSQIYAGVDA-SRLLELVYSTGVLEGTHCEPNDI 256
            ++P  I              +    + QIYA   A S L  L              +++
Sbjct: 181 SVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLP-----------TDDEV 229

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A+A L+LASD A+ ++G  L V+ G
Sbjct: 230 ASAVLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 84.3 bits (208), Expect = 6e-19
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 16/258 (6%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI--QHQLGQQTAK---ELGPNAT 83
           S +L+++ AL+TG  SGIG+A A  +   GA V I+ +  + +  Q   K   E G  A 
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAV 103

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            +  D++ E      V         LDIM   AG     P  I DL  E F +   INV 
Sbjct: 104 LLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIP-DIADLTSEQFQKTFAINVF 162

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
            +   +      ++P+ +  I+ T+S+           Y+ +K+AI+   + +A ++ E 
Sbjct: 163 ALF-WLTQEAIPLLPKGAS-IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N ++P  I T        QI  G    ++ +    T +      +P ++A   +YL
Sbjct: 221 GIRVNIVAPGPIWTAL------QISGGQTQDKIPQFGQQTPMKRAG--QPAELAPVYVYL 272

Query: 264 ASDDAKYVSGHNLVVDGG 281
           AS ++ YV+     V GG
Sbjct: 273 ASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 83.1 bits (206), Expect = 6e-19
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 23/252 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK----ELGPNATFIACDVT 90
            VAL+TGAA  IG+A A    + G +VV+   + +   Q  K     L  +A  +  D++
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             +  +D V        + D++ NNA      P  +   + + + ++  IN++     I+
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAF--YPTPLGQGSEDAWAELFGINLKAPYLLIQ 118

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R +   R+G I+           L  +  Y +SK+A+ GL +S A EL    IR+N 
Sbjct: 119 AFARRLAGSRNGSII-NIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRVNG 176

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           I+P  I  P  M+   +                  V         +IA+A ++L   D+ 
Sbjct: 177 IAPGLILLPEDMDAEYREN------------ALRKVPLKRRPSAEEIADAVIFLL--DSN 222

Query: 270 YVSGHNLVVDGG 281
           Y++G  + VDGG
Sbjct: 223 YITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 7e-19
 Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--C 87
             L  KV ++TGAA GIG   A +  + GAK+ + D++       A ELG +   +    
Sbjct: 5   TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVA 64

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT  + +  A +  + +   +D++  NAG+A  +  S+  ++ + F +V+ +N+ GV  
Sbjct: 65  DVTDLAAMQAAAEEAVERFGGIDVVVANAGIA--SGGSVAQVDPDAFRRVIDVNLLGVF- 121

Query: 148 GIKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
              H+ R  +P    R G +L  +S+           Y  SK+ +     ++  E+  +G
Sbjct: 122 ---HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178

Query: 205 IRINCISPFAIPTPFV 220
           + +       I T  V
Sbjct: 179 VTVGSAYLSWIDTDLV 194

Length = 296

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 7e-19
 Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 25/189 (13%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL---GPNATFIA 86
            L  KV LITGA+SGIG+ATA K    GA V + A     L  +   E+   G  A    
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL-DELVAEIRAKGGTAHAYT 426

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSI---VDLNLEVF---DQVMRI 140
           CD+T  + V   V   +++H  +D + NNAG      RSI   V+ + + F   ++ M +
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAG------RSIRRSVENSTDRFHDYERTMAV 480

Query: 141 N----VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
           N    VR ++  + H    M  RR G ++  +S+           Y  SK+A+       
Sbjct: 481 NYFGAVRLILGLLPH----MRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVA 536

Query: 197 AAELCEYGI 205
           A+E    GI
Sbjct: 537 ASETLSDGI 545

Length = 657

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 83.0 bits (206), Expect = 9e-19
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 25/260 (9%)

Query: 34  EKVALITGAAS--GIGKATAAKFISNGAKVVI---ADIQHQLGQQTAKELGPNATFIACD 88
            K  LITG A+   I    A      GA++      +   +  ++ A+ LG +A  + CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGV 145
           V+ + ++   +   + K   +LD + ++   A K       +D + + F + + I+   +
Sbjct: 61  VSNDEEI-KELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSL 119

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY---SVSKSAIIGLVKSMAAELCE 202
           V+  K +  +M     G I+   +++ L        Y    V+K+A+   V+ +A EL  
Sbjct: 120 VSLAKAALPIM--NPGGSIV---TLSYLGSERVVPGYNVMGVAKAALESSVRYLAYELGR 174

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            GIR+N IS   I T                 ++LE       L G +    ++ N A +
Sbjct: 175 KGIRVNAISAGPIKT-------LAASGITGFDKMLEYSEQRAPL-GRNVTAEEVGNTAAF 226

Query: 263 LASDDAKYVSGHNLVVDGGF 282
           L SD +  ++G  + VDGG+
Sbjct: 227 LLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 1e-18
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 13/213 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQ--QTAKELGPNATFIAC 87
           L  K+AL+TGA+ GIG+  A +    GA V I    I  QL    +  +  G     + C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 88  DVTKESDVSDAVDFTISKH--NQLDIMYNNAGVACKTPRSIV-----DLNLEVFDQVMRI 140
           D + + +V    +  +++    +LDI+ NNA  A +     V     +    ++D +  +
Sbjct: 61  DHSDDDEVEALFE-RVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNV 119

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
            +R   A   ++  +M+    G I+  +S TG L  L    Y V K+AI  +   MA EL
Sbjct: 120 GLRAHYACSVYAAPLMVKAGKGLIVIISS-TGGLEYLFNVAYGVGKAAIDRMAADMAHEL 178

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA 233
             +G+ +  + P  + T  V+E          A
Sbjct: 179 KPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHA 211

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 82.0 bits (203), Expect = 3e-18
 Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 14/205 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT 90
           K   +TGAASGIG+ATA +  + GA++ + D       QT  +     G      A D++
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               V+       + H  +D++ N AG++   T      L  E + +++ +N+ G +  I
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVD---RLTHEQWRRMVDVNLMGPIHVI 117

Query: 150 KHSTRVMI-PRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRI 207
           +     M+   R G ++  +S  GL+  L  H  YS SK  + GL + +  +L  +GI +
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLV-ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGV 176

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVD 232
           + + P A+ TP V     +I AGVD
Sbjct: 177 SVVVPGAVKTPLV--NTVEI-AGVD 198

Length = 272

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 82.0 bits (203), Expect = 4e-18
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGP--NATFIA 86
            +K+A++TGA+SG G  T  +    G  V+      + Q  L  Q A +L    N     
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ-ATQLNLQQNIKVQQ 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVT ++ + +     + +  ++D++ NNAG A      + ++ +E + +    NV G +
Sbjct: 61  LDVTDQNSIHNFQLV-LKEIGRIDLLVNNAGYANGG--FVEEIPVEEYRKQFETNVFGAI 117

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           +  +     M  ++SG I+  +S++G +G      Y  SK A+ G  +S+  EL  +GI 
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGID 177

Query: 207 INCISPFAIPTP 218
           +  I P +  T 
Sbjct: 178 VALIEPGSYNTN 189

Length = 280

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 81.1 bits (201), Expect = 5e-18
 Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 39  ITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF--IACDVTK-ESDV 95
           ITGA+SGIG+A A ++   GA + +   +    Q  A  L   A     A DV   ++  
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALA 66

Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
           + A DF I+ H   D++  NAG++  T     + +L VF +VM  N  G+VA  +     
Sbjct: 67  AAAADF-IAAHGLPDVVIANAGISVGTLTEERE-DLAVFREVMDTNYFGMVATFQPFIAP 124

Query: 156 MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI 215
           M   R G ++  ASV G+ G      YS SK+A I  ++S+  EL   G+R+  I+P  I
Sbjct: 125 MRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYI 184

Query: 216 PTP 218
            TP
Sbjct: 185 RTP 187

Length = 257

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            ++ KV L+TGA  GIG+A   + ++ GA  V A  +     ++  +LGP    +  DVT
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD---PESVTDLGPRVVPLQLDVT 59

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + V+ A +      + + I+ NNAG+  +T   +++ + +     M  N  G +A  +
Sbjct: 60  DPASVAAAAEAA----SDVTILVNNAGIF-RTGSLLLEGDEDALRAEMETNYFGPLAMAR 114

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
               V+     G I+   SV   +      TYS SK+A   L +++ AEL   G R+
Sbjct: 115 AFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRV 171

Length = 238

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 80.6 bits (199), Expect = 7e-18
 Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 20/256 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVT 90
           KV LITGA+ GIG+ATA    + G  V I   +     ++TA  +   G  A  +A DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E+DV    D   S   +LD + NNAG+   +   + D++     ++   NV G     +
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 151 HSTRVMIPRR---SGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIR 206
            + R +   R    G I+  +S+   LG   ++  Y+ SK A+  L   +A EL  +G+R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 207 INCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           +N + P  I T        +I+A G    R   L   T +  G   E +++A   ++L S
Sbjct: 182 VNAVRPGLIET--------EIHASGGQPGRAARLGAQTPL--GRAGEADEVAETIVWLLS 231

Query: 266 DDAKYVSGHNLVVDGG 281
           D A YV+G  L V GG
Sbjct: 232 DAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 15/190 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA-KELGPNATFIACDVTKES 93
           KVAL+TGA+SGIGKATA +  + G  V  A    ++ +      LG     ++ DVT E+
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGA--ARRVDKMEDLASLG--VHPLSLDVTDEA 59

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            +  AVD  I++  ++D++ NNAG        I D+ ++   +   +N+ G     +   
Sbjct: 60  SIKAAVDTIIAEEGRIDVLVNNAGYGSYGA--IEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 154 RVMIPRRSGCILCTASVTG----LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
             M  +RSG I+  +S+ G     LG      Y  +K A+ G   ++  E+  +GI +  
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAW----YHATKFALEGFSDALRLEVAPFGIDVVV 173

Query: 210 ISPFAIPTPF 219
           I P  I T +
Sbjct: 174 IEPGGIKTEW 183

Length = 273

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 68/254 (26%), Positives = 108/254 (42%), Gaps = 31/254 (12%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKELGPNATFIACDVTKES 93
           K  L+ G + GIG A   +F+++GA V           ++ A+E G  AT +  D     
Sbjct: 7   KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG--ATAVQTDSADRD 64

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            V D V     K   LDI+  NAG+A       ++L+ +  D++ +IN+         + 
Sbjct: 65  AVIDVVR----KSGALDILVVNAGIAVFG--DALELDADDIDRLFKINIHAPYHASVEAA 118

Query: 154 RVMIPRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           R M     G I+   SV G    + G+A   Y+ SKSA+ G+ + +A +    GI IN +
Sbjct: 119 RQMPE--GGRIIIIGSVNGDRMPVAGMA--AYAASKSALQGMARGLARDFGPRGITINVV 174

Query: 211 SPFAIPTPFVMEE--MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            P  I T        M  +     A +              H  P ++A    +LA  +A
Sbjct: 175 QPGPIDTDANPANGPMKDMMHSFMAIK-------------RHGRPEEVAGMVAWLAGPEA 221

Query: 269 KYVSGHNLVVDGGF 282
            +V+G    +DG F
Sbjct: 222 SFVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 79.5 bits (196), Expect = 2e-17
 Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 22/257 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDV 89
            +AL+TG + GIG+ATA      G  V +          ++      + G  A  +  D+
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLIT-QAGGKAFVLQADI 60

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           + E+ V             L  + NNAG+   T  ++ +L  E  ++V+  NV G     
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILF-TQCTVENLTAERINRVLSTNVTGYFLCC 119

Query: 150 KHSTRVMIPR---RSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGI 205
           + + + M  +     G I+  +S    LG   ++  Y+ SK AI  L   ++ E+   GI
Sbjct: 120 REAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGI 179

Query: 206 RINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           R+NC+ P  I T        +++A G +  R+  +  +  +  G    P ++A A ++L 
Sbjct: 180 RVNCVRPGFIYT--------EMHASGGEPGRVDRVKSNIPMQRGGQ--PEEVAQAIVWLL 229

Query: 265 SDDAKYVSGHNLVVDGG 281
           SD A YV+G  + + GG
Sbjct: 230 SDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 5e-17
 Identities = 75/278 (26%), Positives = 121/278 (43%), Gaps = 49/278 (17%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI--------ADIQHQLGQQTAKELGPNAT 83
           LE +VA++TG +SGIG AT    +  GA V I        A  + +L ++      P A 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-----PGAR 60

Query: 84  FIA--CDVTKESDVSDAVDFTISKHNQLDIMYNNAG---VAC--KTPRS--IVDLNLEVF 134
            +A  CDV  E+DV+       ++   +D++ NNAG   V+    T       +L L+ F
Sbjct: 61  LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYF 120

Query: 135 DQVMRINVRGVVAGIKHSTRVMIP--RRS--GCILCTASVTGLLGGLAQHTYSVSKSAII 190
                         + + TR  +P  R S    I+C  S+  L         S +++ ++
Sbjct: 121 -------------SVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLL 167

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTP-----F-VMEEMSQIYAGVDASRLLELVYSTG 244
            LVKS+A EL   G+R+N I    + +      +    +  Q +    A     L    G
Sbjct: 168 NLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTA----ALARKKG 223

Query: 245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
           +  G    P++ A A  +LAS  + Y +G ++ V GGF
Sbjct: 224 IPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 33/264 (12%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
               K  ++ G  SGI    A  F   GA V +A    +       +L   GP    ++ 
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV   + V  A      +   +D++   +G A   P     ++   F  V+ I++ G   
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLV--SGAAGNFPAPAAGMSANGFKTVVDIDLLGTFN 123

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +K +   ++ R    I+  ++    +    Q     +K+ +  L +++A E    GIR+
Sbjct: 124 VLKAAY-PLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRV 182

Query: 208 NCISPFAI----------PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           N I P  I          P+P   E  + +   V   R            GT     DIA
Sbjct: 183 NSIVPGPIAGTEGMARLAPSP---ELQAAVAQSVPLKRN-----------GT---KQDIA 225

Query: 258 NAALYLASDDAKYVSGHNLVVDGG 281
           NAAL+LASD A Y++G  L VDGG
Sbjct: 226 NAALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 78.0 bits (193), Expect = 9e-17
 Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIAC 87
             K  LITG +SG G+A A   ++ G +VV      A                 A     
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-----DFEALHPDRALARLL 57

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR----INVR 143
           DVT    +   V    +    +D++ NNAG   +     ++   E     MR    +NV 
Sbjct: 58  DVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHE---GAIE---ESPLAEMRRQFEVNVF 111

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G VA  K     M  RR G I+   S+ GL+       Y  SK A+ G+ +S+A E+  +
Sbjct: 112 GAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPF 171

Query: 204 GIRINCISP 212
           GI +  + P
Sbjct: 172 GIHVTAVEP 180

Length = 277

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 30/267 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDV 89
           K  +I+G   GIGKA   +F  +G  +        +  +++ +   ++ G  A     ++
Sbjct: 9   KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNI 68

Query: 90  T---------KESDVS-DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
                     K+ D   D VDF IS      I+   A V   T    + L  +  + +  
Sbjct: 69  LEPETYKELFKKIDEDFDRVDFFISNA----IISGRAVVGGYTK--FMRLKPKGLNNIYT 122

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
             V   V G + + + M     G I+  +S   L+       +  SK+A+  +VK  A E
Sbjct: 123 ATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATE 182

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L E  IR+N +S   I T         + A  +   +         L     +P D+A A
Sbjct: 183 LGEKNIRVNAVSGGPIDT-------DALKAFTNYEEVKAKTEELSPL-NRMGQPEDLAGA 234

Query: 260 ALYLASDDAKYVSGHNLVVDGGFTSFK 286
            L+L S+ A +++G  +VVDGG T+FK
Sbjct: 235 CLFLCSEKASWLTGQTIVVDGG-TTFK 260

Length = 260

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 24/198 (12%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLG---QQTAKEL---GPN 81
           L  K   ITGA+ GIG A A +   +GA +VI    A+   +L       A+E+   G  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A  +  DV  E  V+ AV   + +   +DI  NNA     T     D  ++ FD + +IN
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG--TEDTPMKRFDLMQQIN 121

Query: 142 VRGVVAGIKHSTRVMIP----RRSGCILCTASVTGLLGG--LAQHT-YSVSKSAIIGLVK 194
           VRG        ++  +P      +  IL T S    L     A HT Y+++K  +     
Sbjct: 122 VRGTFL----VSQACLPHLKKSENPHIL-TLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL 176

Query: 195 SMAAELCEYGIRINCISP 212
            +A E  + GI +N + P
Sbjct: 177 GLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 74.6 bits (183), Expect = 3e-16
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 7/157 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIAC 87
           KL  KVA++TG   GIG+ TA      GAKV++ DI  + GQ T +E   LG  A F++ 
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSY 72

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+ K+ D    +  T++  +++D+++ NAG+      SI     E    V+ IN   V  
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDMLFQNAGLY--KIDSIFSRQQENDSNVLCIN--DVWI 128

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV 184
            IK  T   + ++   +L    + G++G   Q  ++V
Sbjct: 129 EIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSFHTV 165

Length = 169

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKEL----GPNATFIACDV 89
             A++TGA  GIGKA A +    G  V+ I+  Q +L    AKE+    G     IA D 
Sbjct: 2   TWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEIEEKYGVETKTIAADF 60

Query: 90  TKESDVSDAVDFTISKHNQLDI--MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +   D+ + ++  +     LDI  + NN G++   P   ++   +    ++ +NV   + 
Sbjct: 61  SAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATL- 116

Query: 148 GIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                TR+++P    R+ G I+  +S  GL+      TYS SK+ +    +++  E    
Sbjct: 117 ---KMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQ 173

Query: 204 GIRINCISPFAIPTPFVMEEMSQI 227
           GI +  + P+      V  +MS+I
Sbjct: 174 GIDVQSLLPY-----LVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.3 bits (188), Expect = 3e-16
 Identities = 66/275 (24%), Positives = 106/275 (38%), Gaps = 45/275 (16%)

Query: 31  KLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
            L +K+AL+TGA+  +GIG A   +  + G  +                       +  +
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 89  VTK--------ESDVSDA------VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
           +          E D+S              +     I+ NNA  A  T   + +L  E  
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA--AYSTHTRLEELTAEQL 119

Query: 135 DQVMRINVRG----VVAGIKHSTRVMIPRRSGCILCTAS---VTGLLGGLAQHTYSVSKS 187
           D+   +NVR       A  K        +  G I+   S   +  +   LA   Y+ +K 
Sbjct: 120 DKHYAVNVRATMLLSSAFAKQYD----GKAGGRIINLTSGQSLGPMPDELA---YAATKG 172

Query: 188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE 247
           AI    KS+A EL E GI +N ++P    T ++ EE+              LV      +
Sbjct: 173 AIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKH-----------HLV--PKFPQ 219

Query: 248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
           G   EP D A    +L S++AK+++G  +  +GGF
Sbjct: 220 GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 75.7 bits (186), Expect = 4e-16
 Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 33/255 (12%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +   Q+     +E G    +   
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 88  DV-TKESDVSDAVDFTISKH-NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           D+ T  S+    +   I+ +  +LD + +NAG+       + + N +V+  V ++NV   
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL-GDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 146 VAGIKHSTRVMIP--RRS--GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                  T+ ++P   +S  G ++ T+S  G  G      Y+VSK A  GL + +A E  
Sbjct: 121 FM----LTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQ 176

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           +  +R+NCI+P    T       +  +   D  +L                P DI    L
Sbjct: 177 QRNLRVNCINPGGTRTA----MRASAFPTEDPQKLK--------------TPADIMPLYL 218

Query: 262 YLASDDAKYVSGHNL 276
           +L  DD++  +G   
Sbjct: 219 WLMGDDSRRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 74.7 bits (183), Expect = 1e-15
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 44/269 (16%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA------DIQHQLGQQTAKELGPNATFI 85
           + +++A +TG   GIG +   +   +G KVV             L  Q  K LG +  FI
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQ--KALGFD--FI 56

Query: 86  ACDVTKESDVSD------AVDFTISKHNQLDIMYNNAGVACKTPRSIV--DLNLEVFDQV 137
           A     E +V D      A D   ++  ++D++ NNAG+     R +V   +  E +  V
Sbjct: 57  A----SEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGIT----RDVVFRKMTREDWTAV 108

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           +  N+  +    K     M+ R  G I+  +SV G  G   Q  YS +K+ I G   S+A
Sbjct: 109 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 168

Query: 198 AELCEYGIRINCISPFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
            E+   G+ +N +SP  I T  V     + + +I A +   RL                P
Sbjct: 169 QEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL--------------GSP 214

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGGF 282
           ++I +   +LAS+++ + +G +  ++GG 
Sbjct: 215 DEIGSIVAWLASEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 40/273 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            L  K  LITGA+ GIG A A  F + G  + +        +  A +L    G +    A
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR-SIVDLNLEVFDQVMRINVRGV 145
            D++                  +DI+ NNAG     P   + D++   +     + V G 
Sbjct: 64  LDLSSPEAREQLAAEA----GDIDILVNNAG---AIPGGGLDDVDDAAWRAGWELKVFGY 116

Query: 146 VAGIKHSTRV----MIPRRSGCILCTASVTGLLGGLAQHTY---SVSKSAIIGLVKSMAA 198
           +      TR+    M  R SG I+   +V G  G      Y   S   +A++   +++  
Sbjct: 117 I----DLTRLAYPRMKARGSGVIV---NVIGAAGENPDADYICGSAGNAALMAFTRALGG 169

Query: 199 ELCEYGIRINCISPFAI-PTPFVMEEMSQIYAGV------DASRLLELVYSTGVLEGTHC 251
           +  + G+R+       + P P   + M  +  G       D SR  EL+   G+  G   
Sbjct: 170 KSLDDGVRV-----VGVNPGPVATDRMLTLLKGRARAELGDESRWQELL--AGLPLGRPA 222

Query: 252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTS 284
            P ++A+   +LAS  + Y SG  + VDGG ++
Sbjct: 223 TPEEVADLVAFLASPRSGYTSGTVVTVDGGISA 255

Length = 259

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 73.6 bits (181), Expect = 6e-15
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 24/203 (11%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFI 85
              L   V +ITGA+SGIG+ATA  F   GA++V+A    +  Q  A+E   LG     +
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVV 61

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVAC-----KTPRSIVDLNLEVFDQVMRI 140
             DVT    V        S   ++D+  NN GV       +TP       +E  +QV++ 
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETP-------IEAHEQVIQT 114

Query: 141 NVRGVVAGIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
           N+ G +          +P    +  G  +   S+ G         YS SK  + G  +++
Sbjct: 115 NLIGYM----RDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEAL 170

Query: 197 AAELCEY-GIRINCISPFAIPTP 218
             EL ++  I +  + P  + TP
Sbjct: 171 RGELADHPDIHVCDVYPAFMDTP 193

Length = 330

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 34/266 (12%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIADIQHQLGQQT---AKELGPNA 82
           LE K  LI G A+      GI KA A +    GA++       +L ++    A+ELG + 
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQ----GAELAFTYQGERLEKRVEELAEELGSD- 58

Query: 83  TFIACDVTKESDVSDAVDFTISKH-NQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMR 139
             + CDVT +  + DA+  TI K   +LD + ++   A K       +D + E F   M 
Sbjct: 59  LVLPCDVTNDESI-DALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY---SVSKSAIIGLVKSM 196
           I+     A  K +  +M     G IL   ++T L        Y    V+K+A+   V+ +
Sbjct: 118 ISAYSFTALAKAARPLM--NNGGSIL---TLTYLGSERVVPNYNVMGVAKAALEASVRYL 172

Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           AA+L + GIR+N IS   I T       S I    D  ++L+   +   L        ++
Sbjct: 173 AADLGKEGIRVNAISAGPIRT----LAASGI---GDFRKMLKENEANAPLRRN-VTIEEV 224

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGF 282
            N A +L SD +  ++G  + VD G+
Sbjct: 225 GNTAAFLLSDLSSGITGEIIYVDSGY 250

Length = 259

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 34/254 (13%)

Query: 36  VALITGAASGIGKATAAKFISNGAK---VVIADIQHQLGQQTAKELGPNA--TFIACDVT 90
           V ++TGA+ GIG+A A + +  G+    V++A  +  L Q+  +EL P    T +  D++
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPL-QELKEELRPGLRVTTVKADLS 59

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + V   ++       + D++ NNAG      + I  ++L+   +   +N+   V    
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSK-IEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 151 HSTRVMIPRR---------SGCILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAEL 200
              R    R          SG      +V    G GL    Y  SK+A     + +AAE 
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGA-----AVNPFKGWGL----YCSSKAARDMFFRVLAAE- 168

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            E  +R+   +P  + T    E           SR   L    G L     +P   A   
Sbjct: 169 -EPDVRVLSYAPGVVDTDMQREIRETSADPETRSRFRSL-KEKGEL----LDPEQSAEKL 222

Query: 261 LYLASDDAKYVSGH 274
             L   D K+ SG 
Sbjct: 223 ANLLEKD-KFESGA 235

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 7e-14
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 22/189 (11%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF--------- 84
           EKV  ITGA+ G G+A     +  G +VV           TA++    A           
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVV----------ATARDTATLADLAEKYGDRLL 52

Query: 85  -IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            +A DVT  + V  AV+  +    +LDI+ NNAG        I ++        +  N  
Sbjct: 53  PLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM--IEEVTESEARAQIDTNFF 110

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G +   +     +  +RSG I+  +S+ G+        Y  SK A+ G+ +++A E+ E+
Sbjct: 111 GALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEF 170

Query: 204 GIRINCISP 212
           GI++  + P
Sbjct: 171 GIKVTLVEP 179

Length = 275

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 63/231 (27%), Positives = 93/231 (40%), Gaps = 29/231 (12%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKELGPNATFIACDVT 90
           +++K  L+TGA  GIGKA     +++GAK V A ++          + G     +  DVT
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +  A      +   +D++ NNAGV  K    + +  LE   Q M +NV G++   +
Sbjct: 61  DPESIKAAAA----QAKDVDVVINNAGVL-KPATLLEEGALEALKQEMDVNVFGLLRLAQ 115

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
               V+     G I+   SV  L    A  TYS SKSA   L + + AEL   G  +  +
Sbjct: 116 AFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSV 175

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            P  I T      M+    G   S                  P  +A A L
Sbjct: 176 HPGPIDT-----RMAAGAGGPKES------------------PETVAEAVL 203

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 26/195 (13%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVV-----IADIQHQLGQQ--TAKELGPNATFIAC 87
            V LITG +SGIG+A A  F + G +V        D++  L     TA +L         
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALAAAGFTAVQL--------- 51

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV   + ++   +   ++H  LD++ NNAG     P  ++D  +E   +    NV  VV 
Sbjct: 52  DVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGP--LLDGGVEAMRRQFETNVFAVVG 109

Query: 148 GIKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                TR + P   R  G ++   SV+G+L       Y  SK+A+  L  ++  EL  +G
Sbjct: 110 ----VTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFG 165

Query: 205 IRINCISPFAIPTPF 219
           +++  + P AI + F
Sbjct: 166 VQVMEVQPGAIASQF 180

Length = 274

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 22/264 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA-------KELGPNAT 83
            L+ KV LI G A  +G   A    + GAK V         +  A       K  G  A 
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
               D+T  + V    D   +   + DI  N  G   K P  IV+++   +D++  +N +
Sbjct: 65  AFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKP--IVEISEAEYDEMFAVNSK 122

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAELC 201
                IK + R +        L    VT LLG        Y+ SK+ +    ++ + E  
Sbjct: 123 SAFFFIKEAGRHLNDNGKIVTL----VTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFG 178

Query: 202 EYGIRINCISPFAIPTPFVM-EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
             GI +  + P  + TPF   +E ++  A    +  L     TG+   T  E  DI    
Sbjct: 179 ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGL---TDIE--DIVPFI 233

Query: 261 LYLASDDAKYVSGHNLVVDGGFTS 284
            +L + D  +++G  ++++GG+T+
Sbjct: 234 RFLVT-DGWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 67.3 bits (165), Expect = 4e-13
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 24/210 (11%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIA-----DIQHQLGQQTAKELGPNATFIACDVTK 91
            LITGA+ GIG     + ++ G   VIA         +L              +  DVT 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATEL--AALGASHSRLHILELDVTD 58

Query: 92  ESDVS-DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           E   S +AV   +     LD++ NNAG+         +++ E   +V ++NV G +   +
Sbjct: 59  EIAESAEAVAERL-GDAGLDVLINNAGILHSYGP-ASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLA------QHTYSVSKSAIIGLVKSMAAELCEYG 204
                ++ + +   +   +++  +G +        ++Y  SK+A+  L KS+A EL   G
Sbjct: 117 A-FLPLLLKGARAKI--INISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDG 173

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDAS 234
           I +  + P  + T     +M   +A     
Sbjct: 174 ITVVSLHPGWVRT-----DMGGPFAKNKGP 198

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 67.0 bits (163), Expect = 6e-13
 Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 26/262 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIAC 87
           L+ KVAL+TGA+ GIG+A A +  ++GA V I    + +  ++T  E+   G +A  I  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 88  DVTKESDVS---DAVDFTISKH---NQLDIMYNNAGVACKTPRSIVDLNLE-VFDQVMRI 140
           ++     V     ++D  +       + DI+ NNAG+    P + ++   E  FD+++ +
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG---PGAFIEETTEQFFDRMVSV 118

Query: 141 NVRGVVAGIKHS-TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           N +     I+ + +R+    R   I   A+   L   +A   YS++K AI  +  ++A +
Sbjct: 119 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIA---YSMTKGAINTMTFTLAKQ 175

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L   GI +N I P  I T    E +S          +++   +T        E  DIA+ 
Sbjct: 176 LGARGITVNAILPGFIKTDMNAELLS--------DPMMKQYATTISAFNRLGEVEDIADT 227

Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
           A +LAS D+++V+G  + V GG
Sbjct: 228 AAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 66.7 bits (163), Expect = 7e-13
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 22/197 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQL------GQQTAKELGPN 81
           L  K   ITGA+ GIGKA A K   +GA VVI    A+   +L        +  +  G  
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A     D+  E  V  AV+  + K   +DI+ NNA     T    +D  ++ +D +M +N
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLT--GTLDTPMKRYDLMMGVN 118

Query: 142 VRGVVAGIKHSTRVMIP----RRSGCILCTASVTGLLGG-LAQHT-YSVSKSAIIGLVKS 195
            RG        ++  +P     ++  IL  +    L       HT Y+++K  +   V  
Sbjct: 119 TRGTYL----CSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLG 174

Query: 196 MAAELCEYGIRINCISP 212
           MA E    GI +N + P
Sbjct: 175 MAEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 7e-13
 Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 34/212 (16%)

Query: 11  PISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL 70
           PIS  LL  R  R    +   L  K  L+TGA+SGIG+A A +F   GA VV    +  L
Sbjct: 21  PISPQLLINRPPR----QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL 76

Query: 71  GQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIV 127
               A  +   G +A  + CD++    V   V     +   +DI+ NNAG      RSI 
Sbjct: 77  LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAG------RSIR 130

Query: 128 DLNLEVFD------QVMRIN-------VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL 174
               E  D      + M +N       +RG+  G       M+ R  G I+  A+   L 
Sbjct: 131 RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPG-------MLERGDGHIINVATWGVLS 183

Query: 175 GGLAQHT-YSVSKSAIIGLVKSMAAELCEYGI 205
                 + Y+ SK+A+  + + +  E  + G+
Sbjct: 184 EASPLFSVYNASKAALSAVSRVIETEWGDRGV 215

Length = 293

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 1/184 (0%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           LITG ASGIG A A +F+  G  V+I   +++     AK   P      CDV       +
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICG-RNEERLAEAKAENPEIHTEVCDVADRDSRRE 67

Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI 157
            V++   ++  L+++ NNAG+      +  +  L+  +Q +  N+   +         ++
Sbjct: 68  LVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLL 127

Query: 158 PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPT 217
            +    I+  +S    +   +   Y  +K+AI     ++  +L +  + +  ++P  + T
Sbjct: 128 RQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDT 187

Query: 218 PFVM 221
               
Sbjct: 188 TEGN 191

Length = 245

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 24/254 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACD 88
           +L+ K   I G + G+G A A   +  GA+V I        ++  K L    N  ++  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+      + ++      N +D +    G   +     V+      ++++  +++  +  
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDT---VE-EFSGLEEMLTNHIKIPLYA 117

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCEYGIRI 207
           +  S R +  +    I+  +S++G+        +Y+V+K+ +   V+ +A+EL   GIR+
Sbjct: 118 VNASLRFL--KEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I+P  I   F  E         +  +L +       L      P D A   ++L +D+
Sbjct: 176 NGIAPTTISGDFEPER--------NWKKLRK-------LGDDMAPPEDFAKVIIWLLTDE 220

Query: 268 AKYVSGHNLVVDGG 281
           A +V G  + VDGG
Sbjct: 221 ADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 41/273 (15%)

Query: 31  KLEEKVALITGA--ASGIGKATAAKFISNGAKV---------------VIADIQHQLGQQ 73
           +L+ KVA++TG     GIG A   +    GA +               V  D Q QL Q+
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQL-QE 61

Query: 74  TAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV 133
              + G   + +  D+T+     + ++    +     I+ NNA  +     S  +L  E 
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFS--NLTAEE 119

Query: 134 FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
            D+   +NVR          R    +  G I+   S       + +  Y+ +K AI  L 
Sbjct: 120 LDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALT 179

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE----GT 249
            S+AAE+   GI +N I+P    T ++ EE+ Q                 G+L     G 
Sbjct: 180 SSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQ-----------------GLLPMFPFGR 222

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
             EP D A    +LAS++A++++G  +  +GGF
Sbjct: 223 IGEPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 9/91 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQQTAKEL---GPNA--TFIAC 87
           KV +ITGA SGIGK TA +    GA V+IA  + +   G++ A E+     NA    I  
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEEK--GEEAAAEIKKETGNAKVEVIQL 59

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGV 118
           D++  + V    +  +++  +LDI+ NNAG+
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGI 90

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 16/187 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT 90
           K  LITG  SG G   A K  S G  V+   +        AKEL          +  DVT
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCL--TKNGPGAKELRRVCSDRLRTLQLDVT 58

Query: 91  KESDVSDAVDFTISKHNQLDI--MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           K   +  A  +      +  +  + NNAG+          L ++ + + M +N+ G V  
Sbjct: 59  KPEQIKRAAQWVKEHVGEKGLWGLVNNAGI-LGFGGDEELLPMDDYRKCMEVNLFGTV-- 115

Query: 149 IKHSTRVMIP--RRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               T+  +P  RR+ G ++  +S+ G +   A   Y  SK+A+     S+  EL  +G+
Sbjct: 116 --EVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGV 173

Query: 206 RINCISP 212
           +++ I P
Sbjct: 174 KVSIIEP 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACD 88
            L++K  L+TGA+ GIG+A A    + GA++++     +  +  A  L       ++  D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +T E+    AV     +   ++++ NNAGV         D + E  ++++ +N+   +  
Sbjct: 62  LTSEAGRE-AVLARAREMGGINVLINNAGVNHFALLE--DQDPEAIERLLALNLTAPMQL 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +    ++  + S  ++   S  G +G     +Y  SK A+ G  +++  EL + G+R+ 
Sbjct: 119 TRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVL 178

Query: 209 CISPFAIPTPF 219
            ++P A  T  
Sbjct: 179 YLAPRATRTAM 189

Length = 263

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 77/259 (29%)

Query: 68  HQLGQQTAKELG-----PNAT---FIACDVTKESDVSD--AVDFTISK-HNQLDIMYNNA 116
             L    A+ +G     P  T   FI      ++D+ D  ++D  ++    ++D ++N A
Sbjct: 3   RLLRFLGARVIGVDRREPGMTLDGFI------QADLGDPASIDAAVAALPGRIDALFNIA 56

Query: 117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR--RSGCILCTASVTG-- 172
           GV    P   V+L       V R+N      G++H T  ++PR    G I+  AS+ G  
Sbjct: 57  GVPGTAP---VEL-------VARVNF----LGLRHLTEALLPRMAPGGAIVNVASLAGAE 102

Query: 173 ------LLGGLAQHT-------------------YSVSKSAII--GLVKSMAAELCEYGI 205
                 L   LA                      Y +SK A+I   + ++        GI
Sbjct: 103 WPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQP-WFGARGI 161

Query: 206 RINCISPFAIPTPFVMEEMS---QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           R+NC++P  + TP + +  S   Q     DA R+           G     ++ A   ++
Sbjct: 162 RVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRM-----------GRPATADEQAAVLVF 210

Query: 263 LASDDAKYVSGHNLVVDGG 281
           L SD A++++G NL VDGG
Sbjct: 211 LCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 66/272 (24%), Positives = 102/272 (37%), Gaps = 35/272 (12%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDVT 90
            A++TGAA  IG + A      G +VV+     A     L  +       +A     D++
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 91  KESDV----SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD------QVMRI 140
             + +       +D       + D++ NNA     TP    D    V D      QV  +
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 141 NVRGVVAG---IKHSTRVMIPRRSGCILCTASVTGLLGG------LAQHTYSVSKSAIIG 191
                +A    IK   +     R+       S+  L         L    Y+++K A+ G
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC 251
           L +S A EL    IR+N ++P     P  M    Q     D  R + L       E    
Sbjct: 183 LTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQ----EDYRRKVPLGQREASAE---- 234

Query: 252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
               IA+  ++L S  AKY++G  + VDGG +
Sbjct: 235 ---QIADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 67/254 (26%), Positives = 101/254 (39%), Gaps = 38/254 (14%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDV 95
           L+ G +SGIG A A  F + GA+V IA          A+ L  G      A D+T E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDE--- 57

Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIV-DLNLEVFDQVMRINVRGVVAGIKHSTR 154
             AVD   ++    D +      A  TP   V  L L      M     G         R
Sbjct: 58  -AAVDAFFAEAGPFDHV---VITAADTPGGPVRALPLAAAQAAMDSKFWGAY----RVAR 109

Query: 155 VMIPRRSGCILCT---ASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
                  G +      A+V     G+ Q       +A+  L + +A EL    +R+N +S
Sbjct: 110 AARIAPGGSLTFVSGFAAVRPSASGVLQ---GAINAALEALARGLALELAP--VRVNTVS 164

Query: 212 PFAIPTP---FVMEEMSQ-IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  + TP    +  +  + ++A   A RL               +P D+ANA L+LA++ 
Sbjct: 165 PGLVDTPLWSKLAGDAREAMFAAA-AERLPA---------RRVGQPEDVANAILFLAAN- 213

Query: 268 AKYVSGHNLVVDGG 281
             + +G  ++VDGG
Sbjct: 214 -GFTTGSTVLVDGG 226

Length = 230

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV 95
           + L+TGA +G G+    +FI  G KV+    + +  Q+   ELG N      DV   + +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61

Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
            + +    ++   +D++ NNAG+A     +    ++E ++ ++  N +G+V    + TR 
Sbjct: 62  EEMLASLPAEWRNIDVLVNNAGLALGLEPA-HKASVEDWETMIDTNNKGLV----YMTRA 116

Query: 156 MIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           ++P    R  G I+   S  G       + Y  +K+ +     ++  +L    +R+  I 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 212 P 212
           P
Sbjct: 177 P 177

Length = 248

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 43/187 (22%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
            L+TG + GIG A A    S G+  V+                         V++     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLV------------------------VSR----- 31

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
                        D++ +NA +       ++DL     ++ +R NV G    ++ +  +M
Sbjct: 32  ------------RDVVVHNAAILDDGR--LIDLTGSRIERAIRANVVGTRRLLEAARELM 77

Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
             +R G  +  +SV GL G      Y+ SK+A+ GL +  A+E    G+    ++     
Sbjct: 78  KAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWA 137

Query: 217 TPFVMEE 223
              + + 
Sbjct: 138 GSGMAKG 144

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 47/279 (16%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           +V ++ GA  GIG+A A + +  G KV++AD   +  +  AK L   G + +    DV+ 
Sbjct: 3   EVVVVIGAG-GIGQAIARR-VGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSI--VDLN-----LEVFDQVMRINV 142
              V      T      +  + + AGV  +  +P +I  VDL      LE F +V+    
Sbjct: 61  RESVKALAA-TAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG 119

Query: 143 RGVVAGIKHSTRV-MIPRRSGCILCTASVTGLLG-GLAQ--------HTYSVSKSAIIGL 192
            GVV   +   R+  +       L T     LL     Q        H Y ++K A    
Sbjct: 120 AGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALR 179

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--------QIYAGVDASRLLELVYSTG 244
           V + A +  E G RIN ISP  I TP   +E++         ++A   A R         
Sbjct: 180 VMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRP-------- 231

Query: 245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
              GT   P++IA  A +L      +++G + +VDGG T
Sbjct: 232 ---GT---PDEIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 59.5 bits (144), Expect = 3e-10
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 16/259 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIA 86
           L  K+A  T ++ GIG   A      GA V++   +++   + A+E        + ++I 
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLS-RNEENLKKAREKIKSESNVDVSYIV 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D+TK  D+   V   +    + DI + + G     P   +++++E ++  +++ +   V
Sbjct: 65  ADLTKREDLERTVK-ELKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPAV 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVT--GLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
              +     M  +  G I+ + SV     +  +A    +V + ++ GLV+++A EL   G
Sbjct: 122 YLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIA--LSNVVRISMAGLVRTLAKELGPKG 179

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAALY 262
           I +N I P  I T   + +++Q  A  +   + E +  Y+  +  G   EP +I     +
Sbjct: 180 ITVNGIMPGIIRTD-RVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAF 238

Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD   Y++G  + VDGG
Sbjct: 239 LASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 61/264 (23%), Positives = 98/264 (37%), Gaps = 47/264 (17%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE--------LGPNATFIA 86
           + AL+TGAA  IG+A A    ++G  V +    H    +   E        LG  A  + 
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAV----HYNRSRDEAEALAAEIRALGRRAVALQ 65

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D+  E++V   V    +    + ++ NNA +      S        +D+ M  N+R   
Sbjct: 66  ADLADEAEVRALVARASAALGPITLLVNNASLFEYD--SAASFTRASWDRHMATNLRAPF 123

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH---------TYSVSKSAIIGLVKSMA 197
              +   R +     G ++           + Q          +Y++SK+A+    +++A
Sbjct: 124 VLAQAFARALPADARGLVVNM---------IDQRVWNLNPDFLSYTLSKAALWTATRTLA 174

Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
             L    IR+N I P   PT   +    Q                     G    P +IA
Sbjct: 175 QALAPR-IRVNAIGPG--PT---LPSGRQSPEDFARQH-------AATPLGRGSTPEEIA 221

Query: 258 NAALYLASDDAKYVSGHNLVVDGG 281
            A  YL   DA  V+G  + VDGG
Sbjct: 222 AAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKES 93
           AL+ GA+SGIG ATA +  + G  V +   + +  ++   ++   G  A     DVT   
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            V   V        +++++ + AG        + +++ E F+  ++I+   +V   + +T
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDT--YFGKLHEISTEQFESQVQIH---LVGANRLAT 127

Query: 154 RV---MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            V   MI RR G ++   S   L        Y  +K+ +  +V ++  EL   G+R + +
Sbjct: 128 AVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIV 187

Query: 211 SP 212
            P
Sbjct: 188 HP 189

Length = 274

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 26/207 (12%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATFIACDV 89
           E   ALITGA+ GIG A A + ++    +++         +   EL    P AT    D+
Sbjct: 2   ERPTALITGASRGIGAAIARE-LAPTHTLLL----GGRPAERLDELAAELPGATPFPVDL 56

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T    ++ AV     +  +LD++ +NAGVA      + +  ++ +   + +NV       
Sbjct: 57  TDPEAIAAAV----EQLGRLDVLVHNAGVA--DLGPVAESTVDEWRATLEVNVVAPAE-- 108

Query: 150 KHSTRVMIPR---RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG-I 205
              TR+++P      G ++   S  GL       +Y+ SK A+  L  ++  E  E G +
Sbjct: 109 --LTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREE--EPGNV 164

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVD 232
           R+  + P    T   M+       G +
Sbjct: 165 RVTSVHPGRTDTD--MQRGLVAQEGGE 189

Length = 227

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDV 89
           +VA++TGA +G+G  TAA   + GA VV+A      G+  A  +     G + T    D+
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL 76

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS 125
           T  + V  A D   + + ++D++ NNAGV   TP+ 
Sbjct: 77  TSLASVRAAADALRAAYPRIDLLINNAGVMY-TPKQ 111

Length = 306

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 51/242 (21%), Positives = 85/242 (35%), Gaps = 32/242 (13%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           +V L+ G    +G A    F S G  V   D          +E   +   +  D   E  
Sbjct: 2   RVVLVYGGRGALGSAVVQAFKSRGWWVASID------LAENEEADASIIVLDSDSFTEQ- 54

Query: 95  VSDAVDFTISKHNQLDIMYNNAG-VACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
               V        ++D +   AG  A  + +S     ++ +D + + N+         +T
Sbjct: 55  AKQVVASVARLSGKVDALICVAGGWAGGSAKS--KSFVKNWDLMWKQNLWTSFIASHLAT 112

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRINCIS 211
           + +     G ++ T +   L        Y  +K+A+  L +S+AAE      G   N I 
Sbjct: 113 KHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAIL 170

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  + TP   + M       DA       +S+            IA   L+ AS  A+  
Sbjct: 171 PVTLDTPANRKAMP------DAD------FSSWT------PLEFIAELILFWASGAARPK 212

Query: 272 SG 273
           SG
Sbjct: 213 SG 214

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 15/157 (9%)

Query: 36  VALITGAASGIGKATAAKFISN-GAKVVI-------ADIQHQLGQQTA-KELGPNATFIA 86
           V L+TG A GIG+A A       GA++V+        + + +     A + LG    +I+
Sbjct: 207 VYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYIS 266

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVT  + V   ++    ++  +D + + AGV       +     E F+ V+   V G++
Sbjct: 267 ADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL--RDALLAQKTAEDFEAVLAPKVDGLL 324

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS 183
             +  +            +  +SV+   GG  Q  Y+
Sbjct: 325 N-LAQALADEPLDF---FVLFSSVSAFFGGAGQADYA 357

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 50.6 bits (122), Expect = 9e-08
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 17/155 (10%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVI---------ADIQHQLGQQTAKELGPNATFIACD 88
           L+TG   G+G   A      GA+ ++          + +  L     +  G   T +ACD
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL--AELEARGAEVTVVACD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+    V   +    +    L  + + AGV       + ++  E F +V+       V G
Sbjct: 62  VSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDAL--LANMTAEDFARVL----APKVTG 115

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS 183
             +       R     +  +S+ G+LG   Q  Y+
Sbjct: 116 AWNLHEATRDRPLDFFVLFSSIAGVLGSPGQANYA 150

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 16/192 (8%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIA-----DIQHQLGQQTAKELGPNATFIACD 88
           +K  LITG +SGIG   A +    G +V+ A     D+           LG   T I  D
Sbjct: 2   QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM------NSLG--FTGILLD 53

Query: 89  VTKESDVSDAVDFTIS-KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +     V  A D  I+   N+L  ++NNAG     P S +  + +  +Q    N  G   
Sbjct: 54  LDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTI--SRQQMEQQFSTNFFGTHQ 111

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
                   M+P   G I+ T+SV GL+    +  Y+ SK A+     ++  EL   GI++
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKV 171

Query: 208 NCISPFAIPTPF 219
           + I P  I T F
Sbjct: 172 SLIEPGPIRTRF 183

Length = 256

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 14/192 (7%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE 92
            ++  LITG +SGIG A  A+ + +    V A  + +      +  G        D  + 
Sbjct: 3   MKRSILITGCSSGIG-AYCARALQSDGWRVFATCRKEEDVAALEAEG--LEAFQLDYAEP 59

Query: 93  SDVSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             ++  V   +     +LD ++NN   A   P ++ DL  E        N      G   
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNG--AYGQPGAVEDLPTEALRAQFEANF----FGWHD 113

Query: 152 STRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            TR +IP    +  G I+  +S+ GL+    +  Y+ SK AI GL  ++  EL   GI +
Sbjct: 114 LTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHV 173

Query: 208 NCISPFAIPTPF 219
           + I P  I T F
Sbjct: 174 SLIEPGPIETRF 185

Length = 277

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA--CDV 89
           K  +ITGA +GIGK TA +    GA+V++A       ++ A E+     N   I    D+
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDL 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLE 132
                +       +++ ++LD++ NNAGV  + P S  +   E
Sbjct: 62  ASLKSIRAFAAEFLAEEDRLDVLINNAGVM-RCPYSKTEDGFE 103

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 18/208 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K   ITGA+SG G+    + ++ G +V     +           G     +  DVT  + 
Sbjct: 3   KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAA 62

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V   VD   +   ++D++ +NAG              E+ D  +R  +   + G     R
Sbjct: 63  VRAVVDRAFAALGRIDVVVSNAGYGLFGAAE------ELSDAQIRRQIDTNLIGSIQVIR 116

Query: 155 VMIPR----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             +P       G I+  +S  G +       Y  +K  I G V+++A E+  +GI    +
Sbjct: 117 AALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIV 176

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLE 238
            P    T F         AG+D    L+
Sbjct: 177 EPGPARTNFG--------AGLDRGAPLD 196

Length = 276

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K A++TG  SG+G  T       GA V++   +  + ++    +      +  D+  
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-DGVEVVMLDLAD 82

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGV-AC 120
              V    +  +    ++DI+ NNAGV AC
Sbjct: 83  LESVRAFAERFLDSGRRIDILINNAGVMAC 112

Length = 315

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 70/284 (24%), Positives = 118/284 (41%), Gaps = 70/284 (24%)

Query: 32  LEEKVALITGAASG--IGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNATFIA 86
           L  K  L+ G A+   I    A  F + GA++ +    D      +  A+EL     F+ 
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDA-PIFLP 66

Query: 87  CDVTKESDVSDAVDFTISKH-NQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQVMRI 140
            DV +   + +AV   I++   +LD + ++   A   P+      +VD + E F   M +
Sbjct: 67  LDVREPGQL-EAVFARIAEEWGRLDFLLHSIAFA---PKEDLHGRVVDCSREGFALAMDV 122

Query: 141 NVRGVVAGIKHS----TRVMIP--RRSGCILCTASVTG---------LLGGLAQHTYSVS 185
           +         HS     R+  P     G +L T S  G         L+G          
Sbjct: 123 SC--------HSFIRMARLAEPLMTNGGSLL-TMSYYGAEKVVENYNLMG--------PV 165

Query: 186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPT-------PFVMEEMSQIYAGVDASRLLE 238
           K+A+   V+ +AAEL   GIR++ ISP  + T        F  + +  +    + + L  
Sbjct: 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF--DAL--LEDAAERAPLRR 221

Query: 239 LVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
           LV           + +D+   A +LASD A+ ++G+ L +DGG+
Sbjct: 222 LV-----------DIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 26/263 (9%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFI 85
           LE K  ++ G A+   I    A    + GAK+V      +L ++  +      G  +  +
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVR 143
            CDVT + +++   +    +   +  + +    A K       ++ + + F     I+  
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAY 124

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS---VSKSAIIGLVKSMAAEL 200
            + A  + + ++M     G I+     T L G      Y+   V+K+++   VK +A +L
Sbjct: 125 SLTAVAREAKKLM--TEGGSIVTL---TYLGGERVVQNYNVMGVAKASLEASVKYLANDL 179

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEPNDIANA 259
            + GIR+N IS   I T      +S    GV   + +L+ +     L  T     ++ + 
Sbjct: 180 GKDGIRVNAISAGPIRT------LSA--KGVGGFNSILKEIEERAPLRRT-TTQEEVGDT 230

Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
           A +L SD ++ V+G N+ VD G+
Sbjct: 231 AAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 21/210 (10%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTK 91
             LITGA SGIGK  A  +   G +V+       +  +L  Q+A     N   +A DVT 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSA-----NIFTLAFDVTD 57

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                 A+          ++   NAG         VD  L    +V  +NV GV   I+ 
Sbjct: 58  HPGTKAALS---QLPFIPELWIFNAGDCEYMDDGKVDATL--MARVFNVNVLGVANCIEG 112

Query: 152 S-TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
               +    R   +   AS   L    A   Y  SK+A+    +++  +L   GI +  +
Sbjct: 113 IQPHLSCGHRVVIVGSIASELALPRAEA---YGASKAAVAYFARTLQLDLRPKGIEVVTV 169

Query: 211 SPFAIPTPFVME---EMSQIYAGVDASRLL 237
            P  + TP   +    M  I     AS+ +
Sbjct: 170 FPGFVATPLTDKNTFAMPMIITVEQASQEI 199

Length = 240

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 51/261 (19%), Positives = 88/261 (33%), Gaps = 37/261 (14%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV 95
           +AL+T A    G A+A     +G  VV  D       +       N    A     E   
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFESENPGTKA---LSEQKP 59

Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
            + VD  +     +D++ +N  +    P + +D      +  +R     +        + 
Sbjct: 60  EELVDAVLQAGGAIDVLVSNDYIP--RPMNPID---GTSEADIRQAFEALSIFPFALLQA 114

Query: 156 MIP----RRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            I        G I+   S       LA +  Y  +++A + L +S+A EL    I +  I
Sbjct: 115 AIAQMKKAGGGSIIFITSAVPK-KPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAI 173

Query: 211 SPFAIPTPFVM---------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            P    +P            E   ++   V   RL           G    P+++     
Sbjct: 174 GPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRL-----------GR---PDEMGALVA 219

Query: 262 YLASDDAKYVSGHNLVVDGGF 282
           +LAS  A  ++G      GG+
Sbjct: 220 FLASRRADPITGQFFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 12/183 (6%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
           ALI GA  GIG+A A      G +++++          A E+G  A     DV  E +V 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA--RPADVAAELEVW 58

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
                   +   LD++   AG      + +       + +++  N+ G    +KH+  ++
Sbjct: 59  ALAQ----ELGPLDLLVYAAGAI--LGKPLARTKPAAWRRILDANLTGAALVLKHALALL 112

Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
                   L       +L GL+   Y+ +K+A+   V+    E+   G+R+  + P A+ 
Sbjct: 113 AAGARLVFLGAYPELVMLPGLSA--YAAAKAALEAYVEVARKEV--RGLRLTLVRPPAVD 168

Query: 217 TPF 219
           T  
Sbjct: 169 TGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 46/266 (17%), Positives = 89/266 (33%), Gaps = 40/266 (15%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           L+TG A  IG     + ++ G  V   D      +     L     F+  D+T    V +
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLD----RLRDGLDPLLSGVEFVVLDLTDRDLVDE 59

Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV--------AGI 149
                       D + + A  +     S+ D N     + + +NV G +        AG+
Sbjct: 60  LAKGVP------DAVIHLAAQS-----SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108

Query: 150 KH----STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           K     S+  ++      +     +         + Y VSK A   L+++ A     YG+
Sbjct: 109 KRFVFASSVSVVYGDPPPLPIDEDLGPPRP---LNPYGVSKLAAEQLLRAYAR---LYGL 162

Query: 206 RINCISPFAIPTPFVMEEM-----SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            +  + PF +  P    ++     S     +     + ++   G         +D+A+A 
Sbjct: 163 PVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADAL 222

Query: 261 LYLASDDAKYVSGHNLVVDGGFTSFK 286
           L    +    V   N+       + +
Sbjct: 223 LLALENPDGGV--FNIGSGTAEITVR 246

Length = 314

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 22/268 (8%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVI---ADIQHQLGQQTAKELGPNATFIA 86
           L+ K  LITG A+   I  A A     +GA++     +++  +  +  A+E+G N  F++
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCN--FVS 63

Query: 87  -CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVR 143
             DVT    +S+  D    K    D + +    A K       VD +LE F   + I+  
Sbjct: 64  ELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCY 123

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCE 202
            ++   + +  +M     G  + T +  G    +  +    V+K+A+   VK +A ++ E
Sbjct: 124 SLLELSRSAEALM---HDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGE 180

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             IR+N IS   I T      ++    G D S +L+   +T  L+    +  D+  AA+Y
Sbjct: 181 NNIRVNAISAGPIKT------LASSAIG-DFSTMLKSHAATAPLKRNTTQ-EDVGGAAVY 232

Query: 263 LASDDAKYVSGHNLVVDGGFTSFKNLKL 290
           L S+ +K V+G    VD G+    + KL
Sbjct: 233 LFSELSKGVTGEIHYVDCGYNIMGSNKL 260

Length = 260

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 45.2 bits (108), Expect = 7e-06
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI--------ADIQHQLGQQTAKELGPNATFIA 86
              LITG   G+G+A A      GA+ ++        A     L  +  +  G   T +A
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAE-LEAAGARVTVVA 59

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV     ++  +    +    L  + + AGV       +  L  E F  V+     G  
Sbjct: 60  CDVADRDALAAVLAAIPAVEGPLTGVIHAAGVL--DDGVLASLTPERFAAVLAPKAAGAW 117

Query: 147 A 147
            
Sbjct: 118 N 118

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K  LI GA+ GIG+    ++ ++G +V IA  +        + LG  A  +A DV   + 
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRV-IATARDAAALAALQALG--AEALALDVADPAS 58

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V+  + + +     LD     AGV       +  +  E FD VM  NV G +  +     
Sbjct: 59  VA-GLAWKLDGE-ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLP---- 112

Query: 155 VMIPR---RSGCILCTASVTGLLGGLAQHT---YSVSKSAIIGLVKS 195
           +++P      G +   +S  G +G     T   Y  SK+A+   +++
Sbjct: 113 ILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA 159

Length = 222

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 18/256 (7%)

Query: 32  LEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           L  K  ++ G A    I    A      GA V+      ++ +   K +      + CDV
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDV 64

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRINVRGVVA 147
             +  +  A      +  ++D + +    A K     ++ D + + +     I+   ++A
Sbjct: 65  ASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIA 124

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCEYGIR 206
             K++  ++ P  S   + T +  G    +  +    ++K+A+   V+ +A +L + GIR
Sbjct: 125 VAKYARPLLNPGAS---IVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIR 181

Query: 207 INCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           +N IS  A+ T  V         G+     LL+   S  V +G      ++ N A +L S
Sbjct: 182 VNAISAGAVKTLAV--------TGIKGHKDLLKESDSRTV-DGVGVTIEEVGNTAAFLLS 232

Query: 266 DDAKYVSGHNLVVDGG 281
           D +  V+G  + VD G
Sbjct: 233 DLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 9/185 (4%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKES 93
           LI GA S I +A A ++ + GA++ +A    +  ++ A +L        +    D+    
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDIL--- 61

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           D +    F  S     DI+    G          D  L +  +  R N  G +A +    
Sbjct: 62  DTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALAL--REFRTNFEGPIALLTLLA 119

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
                R SG I+  +SV G  G  + + Y  +K+A+   +  +   L + G+ +  + P 
Sbjct: 120 NRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPG 179

Query: 214 AIPTP 218
            + TP
Sbjct: 180 FVRTP 184

Length = 243

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 42/270 (15%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIADIQHQLGQQT---AKELGPNA 82
           ++ K  LI G A+      GI KA   +    GA++    +   L ++    A+ELG + 
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQ----GAELAFTYLNEALKKRVEPIAQELGSDY 58

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRI 140
            +   DV+K        +       ++D + ++   A K       ++ + E F+  M I
Sbjct: 59  VY-ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEI 117

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL--LGGLA----QHTYSVSKSAIIGLVK 194
           +V  ++      TR ++P  +      ASV  L  LGG+      +   V+K+A+   V+
Sbjct: 118 SVYSLIE----LTRALLPLLND----GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVR 169

Query: 195 SMAAELCEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            +A +L + GIR+N IS   I T     + +   I    + +  L+   S          
Sbjct: 170 YLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSI--------- 220

Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDGGF 282
             ++ N+ +YL SD +  V+G    VD G+
Sbjct: 221 -EEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249

Length = 274

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIAC 87
           L  K AL+TG++ GIG  TA      GA VV+   Q      +   E+   G  A+ +  
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNA 116
           D+T E  V+  +D    +   LD +  NA
Sbjct: 64  DLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 59/265 (22%), Positives = 116/265 (43%), Gaps = 23/265 (8%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT--FIACDVTKESDV 95
           L+T ++ GIG   A + +  GA+VVI+    +  ++  KEL        +  D++ + D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 96  SDAVDFTISKHNQLDIMYNNAG-VACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
            + V         +D +  NAG V C+ P  + +     + +   +++  V  G  + T 
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCE-PCMLHEAGYSDWLEAALLHL--VAPG--YLTT 118

Query: 155 VMIP-----RRSGCI--LCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           ++I      +  G +  L + SV   +  L      V+++ ++ L K ++      GIR 
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVSVKEPMPPLV--LADVTRAGLVQLAKGVSRTYGGKGIRA 176

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE----PNDIANAALYL 263
             +   +  TP   E +++I    +     E  +   VLE T  +      ++ +   +L
Sbjct: 177 YTVLLGSFDTPGARENLARI--AEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL 234

Query: 264 ASDDAKYVSGHNLVVDGGFTSFKNL 288
            S++A+Y+ G  +V DG  T   NL
Sbjct: 235 LSENAEYMLGSTIVFDGAMTRGVNL 259

Length = 259

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 24/263 (9%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQ---QTAKELGPNATFIA 86
           L+ K  LITG  S   I    A      GA++    +  +L +   + A EL     F  
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVF-R 62

Query: 87  CDVTKESDVSDAVDFTISKH-NQLDIMYNNAGVACKTPRS---IVDLNLEVFDQVMRINV 142
           CDV  + ++ + V   + KH + LD + ++ G A K   S   +  ++ E F+    I+ 
Sbjct: 63  CDVASDDEI-NQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISA 121

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELC 201
             + A  K + R M+  R+  I+   S  G +  +  +    ++K+++   ++  AA L 
Sbjct: 122 YSLPALAK-AARPMMRGRNSAIV-ALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG 179

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEPNDIANAA 260
           + GIR N IS   I T           +G+ D  +LL  V +   L   +    ++ N A
Sbjct: 180 KEGIRCNGISAGPIKT--------LAASGIADFGKLLGHVAAHNPLR-RNVTIEEVGNTA 230

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
            +L SD +  ++G    VDGG++
Sbjct: 231 AFLLSDLSSGITGEITYVDGGYS 253

Length = 261

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 5/89 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVTKES 93
           +  +ITG + G+G+A A + +  G  V+ I+  +++   + A++   N TF + D+    
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 94  DVS---DAVDFTISKHNQLDI-MYNNAGV 118
           ++    + +  +I + N   I + NNAG+
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGM 90

Length = 251

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 27/265 (10%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAK------ELGPNAT 83
           L  K AL+TG A+   I    A +  + GA++ I  +  + G+   K       L P + 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP-SL 62

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRIN 141
           F+ CDV  ++ + +  +    K  +LDI+ +    A K          + E F + + I+
Sbjct: 63  FLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEIS 122

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS---VSKSAIIGLVKSMAA 198
              +    K +  +M     G I+   ++T L G  A   Y+   V+K+A+   V+ +AA
Sbjct: 123 AYSLAPLCKAAKPLM--SEGGSIV---TLTYLGGVRAIPNYNVMGVAKAALEASVRYLAA 177

Query: 199 ELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           EL    IR+N IS   I T       S    G+    ++  V     L  T  +  ++ N
Sbjct: 178 ELGPKNIRVNAISAGPIRT-----LASSAVGGILD--MIHHVEEKAPLRRTVTQ-TEVGN 229

Query: 259 AALYLASDDAKYVSGHNLVVDGGFT 283
            A +L SD A  ++G  + VD G+ 
Sbjct: 230 TAAFLLSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           LITGA   IG A A   ++ G  V+++   H       ++ G  A  I  D +  + +  
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG--AQCIQADFSTNAGIMA 63

Query: 98  AVDFTISKHNQLD-IMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
            +D      + L  I++N +    + P        +V  ++M+I+V
Sbjct: 64  FIDELKQHTDGLRAIIHNASDWLAEKPG---APLADVLARMMQIHV 106

Length = 236

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 52/272 (19%)

Query: 35  KVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNATFI 85
           K  LI G A+      GI KA  A     GA++      D   +  +  A ELG    F+
Sbjct: 11  KRGLILGVANNRSIAWGIAKACRAA----GAELAFTYQGDALKKRVEPLAAELG---AFV 63

Query: 86  A--CDVTKESDVSDAVDFTISKH-NQLDIMYNNAGVACK---TPRSIVDLNLEVFDQVMR 139
           A  CDVT E+ + DAV  T+ K   +LD + +  G + K   T R  VD + + F   M 
Sbjct: 64  AGHCDVTDEASI-DAVFETLEKKWGKLDFVVHAIGFSDKDELTGR-YVDTSRDNFTMTMD 121

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAA 198
           I+V    A  + + ++M     G IL T +  G    +  +    V+K+A+   VK +A 
Sbjct: 122 ISVYSFTAVAQRAEKLMTD--GGSIL-TLTYYGAEKVMPHYNVMGVAKAALEASVKYLAV 178

Query: 199 ELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE-GTHCEP---- 253
           +L    IR+N IS   I T             + AS + +  Y   +L+   +  P    
Sbjct: 179 DLGPKNIRVNAISAGPIKT-------------LAASGIGDFRY---ILKWNEYNAPLRRT 222

Query: 254 ---NDIANAALYLASDDAKYVSGHNLVVDGGF 282
               ++ ++ALYL SD ++ V+G    VD G+
Sbjct: 223 VTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254

Length = 272

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 39.9 bits (93), Expect = 8e-04
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE-LGPNAT----FIACDV 89
           KV +ITGA SGIG  TA  F  +GA V++A              L          +  D+
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDL 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
                V    +   +K++ L ++  NA V    P ++ +  LE   QV
Sbjct: 62  ASLRSVQRFAEAFKAKNSPLHVLVCNAAV-FALPWTLTEDGLETTFQV 108

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 49/209 (23%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
           AL+TG   GIGK  A                 QL ++     G N   +A +  K  DVS
Sbjct: 56  ALVTGPTDGIGKGFA----------------FQLARK-----GLNLVLVARNPDKLKDVS 94

Query: 97  DA--------------VDFT--ISKHNQ--------LD--IMYNNAGVACKTPRSIVDLN 130
           D+              VDF+  I +  +        LD  ++ NN GV+    R   +++
Sbjct: 95  DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVD 154

Query: 131 LEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL--GGLAQHTYSVSKSA 188
            E+   ++++NV G     +     M+ R+ G I+   S   ++         Y+ +K+ 
Sbjct: 155 EELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAY 214

Query: 189 IIGLVKSMAAELCEYGIRINCISPFAIPT 217
           I    + +  E  + GI + C  P  + T
Sbjct: 215 IDQFSRCLYVEYKKSGIDVQCQVPLYVAT 243

Length = 320

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 17/155 (10%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVI--------ADIQHQLGQQTAKELGPNATFIACDV 89
           LITG   G+G   A    + GA+ ++             +     A   G   + + CDV
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRA--GGARVSVVRCDV 211

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T  + ++  +   ++    L  + + AGV       + +L    F  V+       VAG 
Sbjct: 212 TDPAALAALLA-ELAAGGPLAGVIHAAGVL--RDALLAELTPAAFAAVLAAK----VAGA 264

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV 184
            +   +         +  +SV  LLGG  Q  Y+ 
Sbjct: 265 LNLHELTPDLPLDFFVLFSSVAALLGGAGQAAYAA 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 29/188 (15%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
            ++ GA   IG A A    ++G +V+ A              G ++     D+T E    
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA--------------GRSSGDYQVDITDE---- 42

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
            ++     K    D + + AG A      + +L    F + +   + G +  ++H    +
Sbjct: 43  ASIKALFEKVGHFDAIVSTAGDA--EFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL 100

Query: 157 IPRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
                G I  T+ +     + GG A    +    A+ G V++ A EL   GIRIN +SP 
Sbjct: 101 NDG--GSITLTSGILAQRPIPGGAA---AATVNGALEGFVRAAAIEL-PRGIRINAVSPG 154

Query: 214 AIPTPFVM 221
            +      
Sbjct: 155 VVEESLEA 162

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATFIACDVTKES 93
            +ITGA+SG+G   A      G  V++A    +  +  A+ELG    + T I  D+    
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD 68

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGV 118
            V   VD   +    LD +  NA V
Sbjct: 69  SVRRFVDDFRALGKPLDALVCNAAV 93

Length = 322

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	297
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.98
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PLN02572	442	UDP-sulfoquinovose synthase	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02653	340	GDP-mannose 4,6-dehydratase	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.87
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.87
PLN02650	351	dihydroflavonol-4-reductase	99.87
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.87
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.86
PLN00198	338	anthocyanidin reductase; Provisional	99.86
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.85
PLN02240	352	UDP-glucose 4-epimerase	99.85
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.85
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.85
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.84
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.84
PLN02686	367	cinnamoyl-CoA reductase	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.83
PLN02427	386	UDP-apiose/xylose synthase	99.83
PRK06720	169	hypothetical protein; Provisional	99.81
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.81
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.81
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.8
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.8
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.8
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.8
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.79
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.79
PLN02260	668	probable rhamnose biosynthetic enzyme	99.78
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.77
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.76
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.75
PLN02206	442	UDP-glucuronate decarboxylase	99.75
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.74
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.74
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.73
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.73
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.72
CHL00194	317	ycf39 Ycf39; Provisional	99.71
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.71
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.7
PRK07201	657	short chain dehydrogenase; Provisional	99.64
PRK05865	854	hypothetical protein; Provisional	99.63
PLN02996	491	fatty acyl-CoA reductase	99.62
PLN02778	298	3,5-epimerase/4-reductase	99.55
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.55
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.55
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.52
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.52
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.52
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.49
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.47
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.45
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.44
PLN00016	378	RNA-binding protein; Provisional	99.43
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.41
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.39
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.39
PRK12320	699	hypothetical protein; Provisional	99.38
PLN02260	668	probable rhamnose biosynthetic enzyme	99.32
PRK08309	177	short chain dehydrogenase; Provisional	99.31
PLN02503	605	fatty acyl-CoA reductase 2	99.31
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.27
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.15
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.04
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.96
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.88
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.86
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.77
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.7
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.68
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.59
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.59
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.54
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.49
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.47
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.42
COG2910	211	Putative NADH-flavin reductase [General function p	98.39
KOG2774	366	consensus NAD dependent epimerase [General functio	98.23
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.22
PRK09620	229	hypothetical protein; Provisional	98.21
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.16
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.15
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.14
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.13
PLN00106	323	malate dehydrogenase	98.08
PRK14982	340	acyl-ACP reductase; Provisional	97.96
PTZ00325	321	malate dehydrogenase; Provisional	97.88
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.88
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.85
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.73
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.67
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.64
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.61
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.54
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.51
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.49
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.46
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.45
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.44
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.43
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.34
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.34
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.31
COG3268	382	Uncharacterized conserved protein [Function unknow	97.3
PRK06849	389	hypothetical protein; Provisional	97.29
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.26
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.25
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.23
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.19
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.19
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.16
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.16
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.15
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.12
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.09
PRK05086	312	malate dehydrogenase; Provisional	97.07
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.06
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.06
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.06
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.06
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.05
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.01
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.98
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.98
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.94
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.92
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.89
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.89
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.89
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.88
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.87
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.84
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.74
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.67
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.67
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.67
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.64
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.63
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.62
PRK09496	453	trkA potassium transporter peripheral membrane com	96.62
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.61
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.58
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.58
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.56
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.56
PRK04148	134	hypothetical protein; Provisional	96.52
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.5
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.5
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.49
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.48
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.48
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.48
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.47
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.44
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.42
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.41
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.34
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.32
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.29
PLN00203	519	glutamyl-tRNA reductase	96.29
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.28
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.25
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.22
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.14
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.08
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.08
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.01
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.98
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.97
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.94
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.93
PRK14968	188	putative methyltransferase; Provisional	95.9
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.9
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.89
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.88
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.87
PLN02740	381	Alcohol dehydrogenase-like	95.86
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.86
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.84
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.84
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.83
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.81
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.8
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.8
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.76
PRK09496	453	trkA potassium transporter peripheral membrane com	95.75
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.72
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.65
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.64
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.63
PRK08655	437	prephenate dehydrogenase; Provisional	95.61
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.61
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.58
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.58
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.56
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.54
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.52
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.51
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.51
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.51
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.51
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.47
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.43
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.43
PTZ00354	334	alcohol dehydrogenase; Provisional	95.42
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.41
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.4
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.38
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.34
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.34
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.29
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.29
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.28
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.28
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.27
PRK10669	558	putative cation:proton antiport protein; Provision	95.25
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.25
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.22
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.21
PLN02928	347	oxidoreductase family protein	95.2
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.19
PLN02494	477	adenosylhomocysteinase	95.13
PRK12480	330	D-lactate dehydrogenase; Provisional	95.12
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.09
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.07
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.07
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.03
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.01
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.99
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.98
PLN02827	378	Alcohol dehydrogenase-like	94.98
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	94.97
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.96
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.95
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.92
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.92
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.89
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.88
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.87
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.86
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.85
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	94.83
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.8
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	94.79
PRK00048	257	dihydrodipicolinate reductase; Provisional	94.79
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	94.78
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.77
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.73
PRK08223	287	hypothetical protein; Validated	94.72
PTZ00117	319	malate dehydrogenase; Provisional	94.7
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	94.69
PRK05442	326	malate dehydrogenase; Provisional	94.68
PRK14967	223	putative methyltransferase; Provisional	94.68
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.67
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.64
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.64
PRK13243	333	glyoxylate reductase; Reviewed	94.59
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.57
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.56

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.6e-47  Score=302.97  Aligned_cols=243  Identities=31%  Similarity=0.526  Sum_probs=221.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..++.|+++||||++|||++++..|+++|++|++.+++.+..++....++.  +...+.||++++.+++..+++..+.+|
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            357789999999999999999999999999999999999988888888854  677899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhc--cCCCCceEEEEecccccccCCCCccchhh
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM--IPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++||||||+.  .+..+.....++|++.+.+|+.+.|.++|++.+.+  .++...+||++||+.+..+..++..|+++
T Consensus        90 ~psvlVncAGIt--rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   90 TPSVLVNCAGIT--RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             CCcEEEEcCccc--cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence            999999999998  67778888999999999999999999999999984  44445699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+++.+|+|..++|++++|||||+|.||++.|||+...         ++.....+.+..|+ ++++++||+|+.+.||++
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m---------p~~v~~ki~~~iPm-gr~G~~EevA~~V~fLAS  237 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM---------PPKVLDKILGMIPM-GRLGEAEEVANLVLFLAS  237 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc---------CHHHHHHHHccCCc-cccCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999764         34444555566666 999999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...|+||+.+.+|||+.+
T Consensus       238 ~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  238 DASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             cccccccceeEEEeccccC
Confidence            9999999999999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-45  Score=320.18  Aligned_cols=252  Identities=24%  Similarity=0.307  Sum_probs=215.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++. +
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            4588999999999999999999999999999999999988877766554    4568899999999999999999985 5


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.|++++.|++|++||..+..+.+.+..|+++
T Consensus        83 ~g~iD~lv~nag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as  160 (263)
T PRK08339         83 IGEPDIFFFSTGGP--KPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV  160 (263)
T ss_pred             hCCCcEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence            89999999999976  4456778999999999999999999999999999988778999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.|+++++.|++++||+||+|+||+++|++.........  .....++..+......+. +++++|+|+|+++.||
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~fL  239 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL-GRLGEPEEIGYLVAFL  239 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc-ccCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999998754321110  011112222222333344 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.++||+++.+|||+..+
T Consensus       240 ~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        240 ASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hcchhcCccCceEEECCCcccc
Confidence            9999999999999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.1e-45  Score=315.86  Aligned_cols=244  Identities=21%  Similarity=0.255  Sum_probs=207.1

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++||+++||||+  +|||++++++|+++|++|++++|+. +.++..+++ +.++.++++|++|+++++++++++.+++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999  8999999999999999999999984 343333333 3467889999999999999999999999


Q ss_pred             CCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          107 NQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       107 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++|++|||||.....  .+++.+.+.++|++.+++|+.+++.++++++|.|.+  .|++|++||..+..+.+.+.+|++
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~a  159 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGI  159 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHH
Confidence            9999999999986321  246778899999999999999999999999999964  489999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|+++++.|++++||+||+|+||+|+|++.....       ..++..+......+ .+++++|+|+|+++.||+
T Consensus       160 sKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p-~~r~~~pedva~~~~~l~  231 (252)
T PRK06079        160 AKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-------GHKDLLKESDSRTV-DGVGVTIEEVGNTAAFLL  231 (252)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-------ChHHHHHHHHhcCc-ccCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999753221       11111222223333 388999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.++||+++.+|||+++
T Consensus       232 s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        232 SDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             CcccccccccEEEeCCceec
Confidence            99999999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-44  Score=314.50  Aligned_cols=245  Identities=29%  Similarity=0.482  Sum_probs=210.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.. ...+..++.+.++.++.+|++++++++++++++.+++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999999999999999999999999999999988653 233333444667889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++|||||..  ...++.+.+.++|++++++|+.+++.+++++.|.|.+++ .|++|++||..+..+.+....|++||+
T Consensus        84 iD~lv~~ag~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~  161 (251)
T PRK12481         84 IDILINNAGII--RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKS  161 (251)
T ss_pred             CCEEEECCCcC--CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence            99999999987  445677889999999999999999999999999997654 589999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|+++++.|+.++||+||+|+||+++|++......      ... .........+. +++++|+|+|+++.||+++.
T Consensus       162 a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~------~~~-~~~~~~~~~p~-~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        162 AVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA------DTA-RNEAILERIPA-SRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc------ChH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999998654210      111 11122233344 78999999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.++||+++.+|||+..
T Consensus       234 ~~~~~G~~i~vdgg~~~  250 (251)
T PRK12481        234 SDYVTGYTLAVDGGWLA  250 (251)
T ss_pred             ccCcCCceEEECCCEec
Confidence            99999999999999753

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=9.6e-45  Score=301.36  Aligned_cols=229  Identities=33%  Similarity=0.448  Sum_probs=203.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC-CCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ..+++|+++|||||+|||.++|++|+++|++|++++|+.+++++++.+++ ..+..+..|++|.++++++++.+.++|++
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            35778999999999999999999999999999999999999999999997 57899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|+||++||+++.++++....||++|++
T Consensus        82 iDiLvNNAGl~--~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          82 IDILVNNAGLA--LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             ccEEEecCCCC--cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence            99999999998  4578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +..|+..++.|+..++|||..|.||.+.|+.+......    -+.+......+.     ...++|+|||+.+.|.++.+.
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~----g~~~~~~~~y~~-----~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE----GDDERADKVYKG-----GTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC----chhhhHHHHhcc-----CCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999977654432211    012222222222     456799999999999998773


Q ss_pred             C
Q 022418          269 K  269 (297)
Q Consensus       269 ~  269 (297)
                      .
T Consensus       231 ~  231 (246)
T COG4221         231 H  231 (246)
T ss_pred             c
Confidence            3

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-44  Score=316.70  Aligned_cols=244  Identities=22%  Similarity=0.263  Sum_probs=204.9

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      |.+++|+++||||+  +|||+++|++|+++|++|++++|+.+   .+++..++++.. .++++|++|+++++++++++.+
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            35689999999997  89999999999999999999999853   344444444444 6789999999999999999999


Q ss_pred             HcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          105 KHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++|++|++|||||.....  ..++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+.+.+..|
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhh
Confidence            999999999999986311  245778899999999999999999999999999964  4899999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||+|+++|+++++.|+.++||+||+|+||+|+|++......       ............+. +++.+|+|+|+++.|
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~pl-~r~~~pedva~~v~f  229 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-------FRMILKWNEINAPL-KKNVSIEEVGNSGMY  229 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-------hhHHhhhhhhhCch-hccCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999986432110       01111111122333 788999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++.+.++||+++.+|||+.+
T Consensus       230 L~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        230 LLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             HhhhhhhcccccEEEEcCcccc
Confidence            9999889999999999999864

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.1e-44  Score=310.62  Aligned_cols=248  Identities=26%  Similarity=0.249  Sum_probs=205.2

Q ss_pred             CCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++||+++||||++  |||+++|++|+++|++|++++|+..   .++++.++.+. ..++++|++|+++++++++.+.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999997  9999999999999999999998742   22223232232 346789999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +|++|++|||||.....  ..++.+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||..+..+.+.+..|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence            99999999999975311  245778899999999999999999999999999953  48999999999888888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||+|++.|+++++.|++++||+||+|+||+++|++....     .+  .+..........+. +++++|+|+|+++.||
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-----~~--~~~~~~~~~~~~p~-~r~~~pedva~~~~~L  233 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-----GD--FSTMLKSHAATAPL-KRNTTQEDVGGAAVYL  233 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-----CC--cHHHHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999875321     00  11111222223344 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccCCC
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      +++.+.++||+++.+|||+.++..-+
T Consensus       234 ~s~~~~~itG~~i~vdgG~~~~~~~~  259 (260)
T PRK06603        234 FSELSKGVTGEIHYVDCGYNIMGSNK  259 (260)
T ss_pred             hCcccccCcceEEEeCCcccccCcCC
Confidence            99999999999999999998875443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-44  Score=313.10  Aligned_cols=244  Identities=24%  Similarity=0.291  Sum_probs=203.8

Q ss_pred             CCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQ---QTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+.+..+   +..++.+. ..++++|++|+++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            47899999999997  9999999999999999999998764322   22233332 357899999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +|++|++|||||.....  ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|++|++||..+..+.+.+.+|+
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhh
Confidence            99999999999986321  135678899999999999999999999999999963  48999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.....       .............+. +++.+|+|+|++++||
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~peeva~~~~fL  232 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG-------DARAIFSYQQRNSPL-RRTVTIDEVGGSALYL  232 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc-------chHHHHHHHhhcCCc-cccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998753211       011111112222334 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.++||+++.+|||+.+.
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        233 LSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             hCccccccCceEEeecCCcccC
Confidence            9999999999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=309.28  Aligned_cols=249  Identities=27%  Similarity=0.422  Sum_probs=214.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|++++.++++++.++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877776654     346788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ......+.+.++|++++++|+.+++.++++++|.|.+++.+++|++||..+..+.+...+|+++
T Consensus        84 ~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         84 FGPLDVLVNNAGIN--VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             hCCCcEEEECCCcC--CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            99999999999976  3445667889999999999999999999999999987777999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.|++++||+||+|+||+++|++........ .  .............+. +++.+|+|+|+.++||++
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-~--~~~~~~~~~~~~~~~-~r~~~~~~va~~~~fl~s  237 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-P--DPAAARAETLALQPM-KRIGRPEEVAMTAVFLAS  237 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-C--ChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999875432210 0  111111222223334 889999999999999999


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.+.++||+.+.+|||+...
T Consensus       238 ~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        238 DEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             ccccccCCcEEEECCCeeee
Confidence            99999999999999998653

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-43  Score=306.20  Aligned_cols=249  Identities=34%  Similarity=0.508  Sum_probs=214.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +|++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35788999999999999999999999999999999999988877766554   456888999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  184 (297)
                      ++++|++|||||... ...++.+.+.++|++.+++|+.+++.+++.++|.+++++.+++|++||..+. .+.+.+..|++
T Consensus        81 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         81 FGGLDIAFNNAGTLG-EMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             cCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence            999999999999863 2345678899999999999999999999999999988778999999998876 56778889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.++++++.|+.++||+|++|+||+++|++.....       .............+ .+++.+|+|+|+.++||+
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~  231 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG-------DTPEALAFVAGLHA-LKRMAQPEEIAQAALFLA  231 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc-------CCHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999764321       01111222222233 378899999999999999


Q ss_pred             cCCCCcccccEEEecCCccccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++...++||+.+.+|||+.+.+
T Consensus       232 s~~~~~~~G~~~~~dgg~~~~~  253 (254)
T PRK07478        232 SDAASFVTGTALLVDGGVSITR  253 (254)
T ss_pred             CchhcCCCCCeEEeCCchhccC
Confidence            9988999999999999987653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.5e-43  Score=308.35  Aligned_cols=253  Identities=39%  Similarity=0.585  Sum_probs=214.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ...+.||+++|||+++|||+++|++|++.|++|++++|+.+.+++...++      +.++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999888777664      246889999999999999999999


Q ss_pred             HHH-cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhh-HHHHHHHHHHHhccCCCCceEEEEecccccccCCCC-
Q 022418          103 ISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR-GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ-  179 (297)
Q Consensus       103 ~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~-  179 (297)
                      .++ +|++|++|||||... ...++.+.+.++|++.+++|+. +.+.+.+.+.+.+++++.|.++++||..+..+.++. 
T Consensus        83 ~~~~~GkidiLvnnag~~~-~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALG-LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCC-CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            998 699999999999985 2336889999999999999999 578888888888888889999999999998776665 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH-HHhcCCCCCCCCCHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL-VYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dia~  258 (297)
                      ..|+++|++++.|+|++|.||.++|||||+|.||++.|++......   .. ..+++.+. ......+.++++.|+|+|+
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~---~~-~~~~~~~~~~~~~~~p~gr~g~~~eva~  237 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLD---DG-EMEEFKEATDSKGAVPLGRVGTPEEVAE  237 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccc---cc-hhhHHhhhhccccccccCCccCHHHHHH
Confidence            7999999999999999999999999999999999999997111100   00 01122221 1122234599999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .+.||+++.+.|+||+++.+|||++...
T Consensus       238 ~~~fla~~~asyitG~~i~vdgG~~~~~  265 (270)
T KOG0725|consen  238 AAAFLASDDASYITGQTIIVDGGFTVVG  265 (270)
T ss_pred             hHHhhcCcccccccCCEEEEeCCEEeec
Confidence            9999999988899999999999999864

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-43  Score=306.56  Aligned_cols=241  Identities=34%  Similarity=0.513  Sum_probs=207.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++..+.+|++|+++++++++++.+++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4588999999999999999999999999999999999988877776654   4567889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccC-C-CCccch
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGG-L-AQHTYS  183 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~-~-~~~~Y~  183 (297)
                      +++|++|||||..  ...++.+.+.++|++++++|+.+++.+++++.|.|.+++ .+++|++||..+..+. + ....|+
T Consensus        85 g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~  162 (253)
T PRK05867         85 GGIDIAVCNAGII--TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC  162 (253)
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence            9999999999987  445677889999999999999999999999999997654 5789999998876543 2 357899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++|++++.++++++.|+.++||+||+|+||+++|++.....         + .........+. +++.+|+|+|++++||
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---------~-~~~~~~~~~~~-~r~~~p~~va~~~~~L  231 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---------E-YQPLWEPKIPL-GRLGRPEELAGLYLYL  231 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---------H-HHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999865321         1 11111222333 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcc
Q 022418          264 ASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +++.+.++||+++.+|||+.
T Consensus       232 ~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        232 ASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             cCcccCCcCCCeEEECCCcc
Confidence            99999999999999999975

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-43  Score=307.22  Aligned_cols=244  Identities=23%  Similarity=0.263  Sum_probs=201.5

Q ss_pred             CCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+..   .+++..++.+ ....++||++|+++++++++++.++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999997  679999999999999999999887642   2223322222 3567899999999999999999999


Q ss_pred             cCCccEEEECccCCCCCC--Cc-cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          106 HNQLDIMYNNAGVACKTP--RS-IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++++|++|||||+.....  .+ +.+.+.++|++.+++|+.+++.+++++.|.|+++ .|++|++||..+..+.+.+..|
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y  160 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVM  160 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccc
Confidence            999999999999863210  12 3467889999999999999999999999998654 5899999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +++|+|++.|++.++.|+.++||+||+|+||+++|++.....       .............+. +++++|+|+|+++.|
T Consensus       161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~peevA~~v~~  232 (261)
T PRK08690        161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA-------DFGKLLGHVAAHNPL-RRNVTIEEVGNTAAF  232 (261)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC-------chHHHHHHHhhcCCC-CCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998754321       011111222233344 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++.+.++||++|.+|||+..
T Consensus       233 l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        233 LLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HhCcccCCcceeEEEEcCCccc
Confidence            9999999999999999999765

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-43  Score=305.61  Aligned_cols=249  Identities=28%  Similarity=0.401  Sum_probs=214.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|+++++++.++++.+.++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999999999888888777777778899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||...  ... .+.+.++|++.+++|+.+++.+++++.|.|. ++.|++|++||..+..+.+.+..|+++|+++
T Consensus        82 d~lv~~ag~~~--~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~  157 (261)
T PRK08265         82 DILVNLACTYL--DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAI  157 (261)
T ss_pred             CEEEECCCCCC--CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            99999999763  222 3568899999999999999999999999997 5678999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.|+.++||+||+|+||+++|++.......     ..+..........+ .+++.+|+|+|+++.||+++...
T Consensus       158 ~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~-----~~~~~~~~~~~~~p-~~r~~~p~dva~~~~~l~s~~~~  231 (261)
T PRK08265        158 RQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG-----DRAKADRVAAPFHL-LGRVGDPEEVAQVVAFLCSDAAS  231 (261)
T ss_pred             HHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc-----chhHHHHhhcccCC-CCCccCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999986543211     11111111112223 37899999999999999999899


Q ss_pred             cccccEEEecCCcccccCC
Q 022418          270 YVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++||+.|.+|||++.+..+
T Consensus       232 ~~tG~~i~vdgg~~~~~~~  250 (261)
T PRK08265        232 FVTGADYAVDGGYSALGPE  250 (261)
T ss_pred             CccCcEEEECCCeeccCCC
Confidence            9999999999999877443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-43  Score=305.94  Aligned_cols=245  Identities=24%  Similarity=0.298  Sum_probs=205.6

Q ss_pred             ccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQL---GQQTAKELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .++++||+++||||+  +|||++++++|+++|++|++++|+.+.   +++..++++ .+.++.||++|+++++++++++.
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence            456899999999998  599999999999999999999998643   334434433 35678999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          104 SKHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +++|++|++|||||.....  .+++.+.+.++|++++++|+.+++.+++.++|.|++  .|++|++||..+..+.+.+..
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~  161 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNL  161 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchh
Confidence            9999999999999976321  245778899999999999999999999999999953  589999999998888888889


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+++|+|++.|+++++.|+.++||+||+|+||+++|++.....       ..+...+......+. +++.+|+|+|+.++
T Consensus       162 Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~p~dva~~~~  233 (258)
T PRK07533        162 MGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID-------DFDALLEDAAERAPL-RRLVDIDDVGAVAA  233 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC-------CcHHHHHHHHhcCCc-CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999864321       001111122223344 78999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ||+++...++||+.+.+|||++.
T Consensus       234 ~L~s~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        234 FLASDAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             HHhChhhccccCcEEeeCCcccc
Confidence            99999889999999999999763

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-43  Score=304.80  Aligned_cols=253  Identities=25%  Similarity=0.366  Sum_probs=215.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988777665544     23678899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.+....|++
T Consensus        84 ~~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         84 RFGGVDMLVNNAGQG--RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             hcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            999999999999986  455677889999999999999999999999999998877899999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcCCC-HHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAGVD-ASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +|++++.++++++.|+.++||+||+|+||+++|+++...+... ..... .+...........+.+++.+|+|+|+++.|
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~  241 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999876543211 11111 111111111222234889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++...++||+++.+|||+..
T Consensus       242 L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        242 LASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HhCchhcccccceEEEcCceEe
Confidence            9999889999999999999653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.1e-43  Score=304.59  Aligned_cols=245  Identities=22%  Similarity=0.289  Sum_probs=207.0

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.   +.+++..+++ +.++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            46889999999997  8999999999999999999998753   4455555555 3568889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          104 SKHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +++|++|++|||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+.+.+
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  160 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNV  160 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCch
Confidence            999999999999997631  1245678899999999999999999999999999954  489999999999988888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.....     .. .+ .........+. +++.+|+|+|+.++
T Consensus       161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-----~~-~~-~~~~~~~~~p~-~r~~~p~~va~~~~  232 (257)
T PRK08594        161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVG-----GF-NS-ILKEIEERAPL-RRTTTQEEVGDTAA  232 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhc-----cc-cH-HHHHHhhcCCc-cccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998653211     00 01 11112223333 78899999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ||+++.+.++||+++.+|||+..
T Consensus       233 ~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        233 FLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHcCcccccccceEEEECCchhc
Confidence            99999999999999999999753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.1e-43  Score=306.65  Aligned_cols=245  Identities=24%  Similarity=0.300  Sum_probs=203.5

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ--LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++   ..++.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876533  222222222   234678899999999999999999


Q ss_pred             HHHcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          103 ISKHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .+++|++|++|||||....  ...++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||..+..+.+.+.
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccc
Confidence            9999999999999997631  1245778899999999999999999999999999964  48999999999988888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.....     . ..+. .+......+. +++++|+|+|+++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~-----~-~~~~-~~~~~~~~p~-~r~~~~~dva~~~  231 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVG-----G-ILDM-IHHVEEKAPL-RRTVTQTEVGNTA  231 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccc-----c-chhh-hhhhhhcCCc-CcCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999753210     0 0111 1112223344 7899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      .||+++.+.++||+++.+|||+..
T Consensus       232 ~fl~s~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        232 AFLLSDLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             HHHhChhhccccCcEEEECCcccc
Confidence            999999999999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-43  Score=304.63  Aligned_cols=246  Identities=23%  Similarity=0.242  Sum_probs=202.8

Q ss_pred             CCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQ---HQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|.   .+.+++..++.+. ...+.+|++|+++++++++.+.++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHH
Confidence            378999999996  6899999999999999999988654   3444444444433 356899999999999999999999


Q ss_pred             cCCccEEEECccCCCCCC--Cc-cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          106 HNQLDIMYNNAGVACKTP--RS-IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++++|++|||||......  .+ +.+.+.++|++.+++|+.+++.++++++|+|.  +.|++|++||..+..+.+.+.+|
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y  159 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNTM  159 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcchH
Confidence            999999999999863211  12 34678899999999999999999999999994  34899999999998888888899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.....       ..+..........+. +++++|+|+|+++.|
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~pedva~~~~~  231 (260)
T PRK06997        160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIK-------DFGKILDFVESNAPL-RRNVTIEEVGNVAAF  231 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcccc-------chhhHHHHHHhcCcc-cccCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998653211       001111122223344 789999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccccC
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      |+++.+.++||++|.+|||++..++
T Consensus       232 l~s~~~~~itG~~i~vdgg~~~~~~  256 (260)
T PRK06997        232 LLSDLASGVTGEITHVDSGFNAVVG  256 (260)
T ss_pred             HhCccccCcceeEEEEcCChhhccc
Confidence            9999999999999999999887665

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=302.45  Aligned_cols=245  Identities=32%  Similarity=0.474  Sum_probs=209.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++   +.++..+.+|++|+++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999764 344444433   45788899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC--Cccc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA--QHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~--~~~Y  182 (297)
                      +++++|++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.+++++.+++|++||..+..+.+.  +..|
T Consensus        83 ~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  160 (254)
T PRK06114         83 ELGALTLAVNAAGIA--NANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHY  160 (254)
T ss_pred             HcCCCCEEEECCCCC--CCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchH
Confidence            999999999999986  445577889999999999999999999999999998777899999999998766543  6799


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +++|++++.+++.++.|+.++||+||+|+||+++|++....      . ..+. .+......+. +++.+|+|+|+.++|
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~------~-~~~~-~~~~~~~~p~-~r~~~~~dva~~~~~  231 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP------E-MVHQ-TKLFEEQTPM-QRMAKVDEMVGPAVF  231 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc------c-chHH-HHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999986421      0 0111 1122233344 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++.+.++||+++.+|||+..
T Consensus       232 l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        232 LLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             HcCccccCcCCceEEECcCEec
Confidence            9999999999999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-42  Score=304.56  Aligned_cols=245  Identities=25%  Similarity=0.260  Sum_probs=204.5

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++|+++||||+  +|||+++|++|+++|++|++++|+.   +.+++..++++ ....+++|++|+++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence            45789999999997  8999999999999999999998874   33444444443 356789999999999999999999


Q ss_pred             HcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          105 KHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +++++|++|||||.....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|++|++||.++..+.+.+..|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhh
Confidence            999999999999986321  245678899999999999999999999999999954  4899999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||+|++.|+++++.|+.++||+||+|+||+++|++....     .+  ............+. +++++|+|+|++++|
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-----~~--~~~~~~~~~~~~p~-~r~~~peevA~~~~~  234 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-----GD--FRYILKWNEYNAPL-RRTVTIEEVGDSALY  234 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-----Cc--chHHHHHHHhCCcc-cccCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999864321     00  01111111122333 788999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      |+++.+.++||++|.+|||+.+.
T Consensus       235 L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        235 LLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HhCccccCccceEEEECCCceee
Confidence            99999999999999999998765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-42  Score=302.47  Aligned_cols=246  Identities=24%  Similarity=0.218  Sum_probs=203.7

Q ss_pred             cCCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQH--QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++|+++||||  ++|||++++++|+++|++|++++|+.  +.+++..++++.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            4588999999999  89999999999999999999998764  3455665555556788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++|++|||||+....  ..++.+.++++|++.+++|+.+++.++++++|.|++  .|++|++++. +..+.+.+..|+
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~~Y~  159 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYDWMG  159 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccchhH
Confidence            99999999999986321  134677889999999999999999999999999963  4889999865 345567778899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|+++++.|++++||+||+|+||+++|++.+...     .  .+..........+..+++.+|+|+|+.++||
T Consensus       160 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-----~--~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l  232 (256)
T PRK07889        160 VAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP-----G--FELLEEGWDERAPLGWDVKDPTPVARAVVAL  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc-----C--cHHHHHHHHhcCccccccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998754321     0  0111112222334422689999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...++||+++.+|||++.+
T Consensus       233 ~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        233 LSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             hCcccccccceEEEEcCceecc
Confidence            9998899999999999998754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-42  Score=302.53  Aligned_cols=247  Identities=23%  Similarity=0.316  Sum_probs=209.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+.++...+++    +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998865 455555444333    45788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCC----CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          105 KHNQLDIMYNNAGVACK----TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      +++++|++|||||....    ...++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.+.+.
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  163 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYA  163 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcc
Confidence            99999999999987521    12346677899999999999999999999999999877778999999999888888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.++++++.|+.++||+|++|+||+++|++.....       ..+...+......+. +++.+|+|+|+++
T Consensus       164 ~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~-------~~~~~~~~~~~~~~~-~r~~~p~~va~~~  235 (260)
T PRK08416        164 GHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT-------NYEEVKAKTEELSPL-NRMGQPEDLAGAC  235 (260)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc-------CCHHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999864321       111122222223333 7899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++|+++...+++|+.+.+|||.++
T Consensus       236 ~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        236 LFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HHHcChhhhcccCcEEEEcCCeec
Confidence            999999889999999999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.3e-42  Score=307.32  Aligned_cols=247  Identities=19%  Similarity=0.230  Sum_probs=203.5

Q ss_pred             CccCCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC----------------CCeeEEEecC
Q 022418           28 ESRKLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG----------------PNATFIACDV   89 (297)
Q Consensus        28 ~~~~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~----------------~~v~~~~~D~   89 (297)
                      ..++++||+++||||  ++|||+++|+.|+++|++|++ +|+.+.+++...+..                .....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            456799999999999  899999999999999999998 787777766553331                1146788898


Q ss_pred             --CC------------------HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHH
Q 022418           90 --TK------------------ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI  149 (297)
Q Consensus        90 --s~------------------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  149 (297)
                        ++                  +++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  4489999999999999999999999864322356888999999999999999999999


Q ss_pred             HHHHHhccCCCCceEEEEecccccccCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHh
Q 022418          150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQI  227 (297)
Q Consensus       150 ~~~~~~l~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~  227 (297)
                      ++++|.|++  .|++|++||..+..+.+.+ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++.... .. 
T Consensus       162 ~~~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~~-  237 (303)
T PLN02730        162 QHFGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-GF-  237 (303)
T ss_pred             HHHHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-cc-
Confidence            999999965  3999999999988887765 47999999999999999999986 799999999999999987531 10 


Q ss_pred             hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          228 YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                          . +..........+. +++.+|+|+|+.++||+++.+.++||+.+.+|||+...
T Consensus       238 ----~-~~~~~~~~~~~pl-~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~  289 (303)
T PLN02730        238 ----I-DDMIEYSYANAPL-QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAM  289 (303)
T ss_pred             ----c-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCcccc
Confidence                1 1111112222333 67899999999999999999999999999999997654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3e-42  Score=300.46  Aligned_cols=252  Identities=19%  Similarity=0.220  Sum_probs=211.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++  ..+++++.+|++|+++++++++++.++++++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47999999999999999999999999999999988877766655  2367889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      |||||........+.+.+.++|.+.+++|+.+++.+.+.++|.+. +++.|++|++||..+..+.+....|+++|++++.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            999997532234567788999999999999999999999999886 3457899999999998888888999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASR-LLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++++++.++.++||+||+|+||+++|++.+........  ....++ .........+. +++.+|+|+|+++.||+++.+
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc-cCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999987643322111  111111 11112223344 889999999999999999999


Q ss_pred             CcccccEEEecCCcccccC
Q 022418          269 KYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~~~  287 (297)
                      .++||+++.+|||+....+
T Consensus       240 ~~itG~~i~vdgg~~~~~~  258 (259)
T PRK08340        240 EYMLGSTIVFDGAMTRGVN  258 (259)
T ss_pred             ccccCceEeecCCcCCCCC
Confidence            9999999999999876544

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-42  Score=303.51  Aligned_cols=250  Identities=31%  Similarity=0.500  Sum_probs=210.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++   +.++..+.+|+++++++.++++++.++++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999 6666655544   45688999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||... ....+.+.+.+.|++++++|+.+++.++++++|.+++++ |++|++||..+..+.+...+|++||+
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         82 RVDVLFNNAGVDN-AAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CcCEEEECCCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            9999999999863 234567788999999999999999999999999997654 89999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|+++++.|+.+.||+||+|+||+|+|++........... ....+........+ .+++.+|+|+|+.++||+++.
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDE-AGKTFRENQKWMTP-LGRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhh-HHHHHhhhhhccCC-CCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999999875432110000 00011111111223 378899999999999999998


Q ss_pred             CCcccccEEEecCCcccc
Q 022418          268 AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~  285 (297)
                      ..+++|+++.+|||....
T Consensus       238 ~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        238 SSFITGETIRIDGGVMAY  255 (272)
T ss_pred             hcCcCCCEEEECCCcccC
Confidence            899999999999997644

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-42  Score=299.76  Aligned_cols=246  Identities=26%  Similarity=0.401  Sum_probs=215.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++..+.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999999999999988777766554   3467888999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|..  ...++.+.+.++|++++++|+.+++.+++++.+.+.+++.+++|++||..+..+.+....|+++|
T Consensus        85 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 GPIDVLINNAGIQ--RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            9999999999976  44567788999999999999999999999999999776779999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.++||+||+|+||+++|++......       .+...+......+. +++++|+|+|+++.||+++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-------~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~~  234 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-------DEAFTAWLCKRTPA-ARWGDPQELIGAAVFLSSK  234 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999998754221       11122222333444 8899999999999999999


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+.++||+++.+|||+...
T Consensus       235 ~~~~i~G~~i~~dgg~~~~  253 (254)
T PRK08085        235 ASDFVNGHLLFVDGGMLVA  253 (254)
T ss_pred             cccCCcCCEEEECCCeeec
Confidence            9999999999999998653

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.2e-42  Score=299.44  Aligned_cols=250  Identities=28%  Similarity=0.441  Sum_probs=211.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+..        .++.++++|++|+++++++++++.++++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468899999999999999999999999999999999986532        257889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.+++|++||..+..+.+.+.+|+++|+++
T Consensus        74 d~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  151 (258)
T PRK06398         74 DILVNNAGIE--SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAV  151 (258)
T ss_pred             CEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHH
Confidence            9999999986  45567888999999999999999999999999999877789999999999998888999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHH---HHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL---ELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +.+++.++.|+.+. |+||+|+||+++|++......... ....+...   ....... +.+++.+|+|+|++++||+++
T Consensus       152 ~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~p~eva~~~~~l~s~  228 (258)
T PRK06398        152 LGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEV-GKDPEHVERKIREWGEMH-PMKRVGKPEEVAYVVAFLASD  228 (258)
T ss_pred             HHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccc-cCChhhhHHHHHhhhhcC-CcCCCcCHHHHHHHHHHHcCc
Confidence            99999999999875 999999999999998754321110 01111111   1111222 337889999999999999999


Q ss_pred             CCCcccccEEEecCCcccccCCCCCC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKNLKLPA  292 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~~~~~~  292 (297)
                      .+.+++|+++.+|||+......-+|.
T Consensus       229 ~~~~~~G~~i~~dgg~~~~~~~~~~~  254 (258)
T PRK06398        229 LASFITGECVTVDGGLRALIPLSTPK  254 (258)
T ss_pred             ccCCCCCcEEEECCccccCCCCCCCC
Confidence            99999999999999988775555554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-42  Score=298.82  Aligned_cols=243  Identities=21%  Similarity=0.227  Sum_probs=199.7

Q ss_pred             CCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++||+++||||++  |||++++++|+++|++|++++|+. ++++..+++   ...+..+.||++|+++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6899999999986  999999999999999999999873 333333332   2346778999999999999999999999


Q ss_pred             CCccEEEECccCCCCCC---CccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          107 NQLDIMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       107 g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.+.+.+.|.+.  +.|++|++||..+..+.+.+.+|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            99999999999763211   1145678999999999999999999999998664  348999999999888888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||+|+++|+++++.|+.++||+||+|+||+++|++....     .  ......+......+. +++.+|+|+|++++||
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-----~--~~~~~~~~~~~~~p~-~r~~~pedva~~~~~L  232 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-----K--DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFL  232 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-----C--chHHHHHHHHHcCCC-cCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999864311     0  011111222223343 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.+++|+++.+|||+...
T Consensus       233 ~s~~~~~itG~~i~vdgg~~~~  254 (262)
T PRK07984        233 CSDLSAGISGEVVHVDGGFSIA  254 (262)
T ss_pred             cCcccccccCcEEEECCCcccc
Confidence            9999999999999999997643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1e-41  Score=300.05  Aligned_cols=255  Identities=25%  Similarity=0.377  Sum_probs=216.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|+++++++.++++++.+++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999987777666554   4568889999999999999999999999


Q ss_pred             CCccEEEECccCCCCC-------------CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418          107 NQLDIMYNNAGVACKT-------------PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus       107 g~id~li~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      +++|++|||||.....             ..++.+.+.++|++.+++|+.+++.++++++|.+.+++.+++|++||..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            9999999999965211             124667889999999999999999999999999987778999999999999


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCH
Q 022418          174 LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       174 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                      .+.+....|+++|++++.++++++.++.++||+||+|+||+++|++.+........  ......+......+ .+++.+|
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~p-~~r~~~~  242 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG--SLTERANKILAHTP-MGRFGKP  242 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc--cchhHHHHHhccCC-ccCCCCH
Confidence            99888999999999999999999999999999999999999999986543311100  01111122222333 4889999


Q ss_pred             HHHHHHHHHHhcC-CCCcccccEEEecCCcccccC
Q 022418          254 NDIANAALYLASD-DAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       254 ~dia~~~~~l~~~-~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +|+|++++||+++ .+.++||++|.+|||++.+.+
T Consensus       243 ~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~~  277 (278)
T PRK08277        243 EELLGTLLWLADEKASSFVTGVVLPVDGGFSAYSG  277 (278)
T ss_pred             HHHHHHHHHHcCccccCCcCCCEEEECCCeecccC
Confidence            9999999999999 889999999999999988765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.1e-41  Score=295.99  Aligned_cols=246  Identities=26%  Similarity=0.440  Sum_probs=208.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++||+++||||++|||++++++|+++|++|++++++.. ...+.....+.++..+++|++|++++.++++++.++++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999998887543 12222233355688899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|++|||||..  ....+.+.+.++|++.+++|+.+++.+++++.|.|.+++ .|++|++||..+..+.+....|+.+|
T Consensus        85 ~~D~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (253)
T PRK08993         85 HIDILVNNAGLI--RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASK  162 (253)
T ss_pred             CCCEEEECCCCC--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHH
Confidence            999999999976  455577889999999999999999999999999997654 58999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.++++++.|+.++||+||+|+||+++|++......      ....... .....+ .+++.+|+|+|+.+.||+++
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~------~~~~~~~-~~~~~p-~~r~~~p~eva~~~~~l~s~  234 (253)
T PRK08993        163 SGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA------DEQRSAE-ILDRIP-AGRWGLPSDLMGPVVFLASS  234 (253)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc------chHHHHH-HHhcCC-CCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999998653211      1111111 222333 48899999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...+++|+++.+|||+..
T Consensus       235 ~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        235 ASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             cccCccCcEEEECCCEec
Confidence            999999999999999754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.4e-42  Score=299.51  Aligned_cols=231  Identities=35%  Similarity=0.528  Sum_probs=202.3

Q ss_pred             cCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHH----HHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc-CCccEEE
Q 022418           41 GAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQ----TAKELGPNATFIACDVTKESDVSDAVDFTISKH-NQLDIMY  113 (297)
Q Consensus        41 Gas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~-g~id~li  113 (297)
                      |++  +|||+++|++|+++|++|++++|+.+++++    +.++.+.+  ++.+|++++++++++++++.+.+ |++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  999999999999999999999999987543    33433433  59999999999999999999999 9999999


Q ss_pred             ECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          114 NNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       114 ~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||+|....  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+  .|++|++||..+..+.+.+..|+++|++++.
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998742  2367788899999999999999999999999998855  3899999999999999999999999999999


Q ss_pred             HHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          192 LVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       192 ~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      ++|.++.||++ +|||||+|+||+++|++......       .++..+......|. +++.+|+|+|+++.||+++.+.+
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~-------~~~~~~~~~~~~pl-~r~~~~~evA~~v~fL~s~~a~~  228 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG-------NEEFLEELKKRIPL-GRLGTPEEVANAVLFLASDAASY  228 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT-------HHHHHHHHHHHSTT-SSHBEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhcccc-------ccchhhhhhhhhcc-CCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999 99999999999999998654321       23344555555666 88899999999999999999999


Q ss_pred             ccccEEEecCCcc
Q 022418          271 VSGHNLVVDGGFT  283 (297)
Q Consensus       271 ~tG~~i~vdgG~~  283 (297)
                      +|||+|.+|||++
T Consensus       229 itG~~i~vDGG~s  241 (241)
T PF13561_consen  229 ITGQVIPVDGGFS  241 (241)
T ss_dssp             GTSEEEEESTTGG
T ss_pred             ccCCeEEECCCcC
Confidence            9999999999985

...

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=295.10  Aligned_cols=246  Identities=30%  Similarity=0.459  Sum_probs=210.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+ +..++..   .+.+.++.++.+|+++++++.++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998 4333333   33356788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||+|..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.+.+..|++
T Consensus        88 ~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (258)
T PRK06935         88 EFGKIDILVNNAGTI--RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTA  165 (258)
T ss_pred             HcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHH
Confidence            999999999999986  445677888999999999999999999999999998877899999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++++++|+.++||+||+|+||+++|++......       .+..........+. +++.+|+|+|+.+.||+
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  237 (258)
T PRK06935        166 SKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-------DKNRNDEILKRIPA-GRWGEPDDLMGAAVFLA  237 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-------ChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999997643211       01111112223333 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.+++|+++.+|||+..
T Consensus       238 s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        238 SRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             ChhhcCCCCCEEEECCCeec
Confidence            99999999999999999754

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=293.00  Aligned_cols=247  Identities=38%  Similarity=0.581  Sum_probs=214.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+.+   +.++.++.+|+++.+++.++++.+.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5688999999999999999999999999999999999988766655443   5578899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|... ...++.+.+.++|++++++|+.+++.++++++|.+.+++.+++|++||..+..+.+.+..|+.+|
T Consensus        83 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 GRLDYAFNNAGIEI-EQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence            99999999999763 23346778999999999999999999999999999877778999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.++.++||+|++|+||+++|++.....+.      .+..........+. +++.+|+|+++.+.+|+++
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~p~~ia~~~~~l~~~  234 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA------DPRKAEFAAAMHPV-GRIGKVEEVASAVLYLCSD  234 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc------ChHHHHHHhccCCC-CCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999987653321      12222222233334 7889999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      .+.+++|+.|.+|||+++
T Consensus       235 ~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        235 GASFTTGHALMVDGGATA  252 (253)
T ss_pred             cccCcCCcEEEECCCccC
Confidence            999999999999999853

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-41  Score=292.71  Aligned_cols=246  Identities=30%  Similarity=0.420  Sum_probs=214.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.++..+.+   +.++.++.+|++|+++++++++.+.+++
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3688999999999999999999999999999999999988776665554   3458889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|..  ...++.+.+.++|++++++|+.+++.+++++.+.|.+++.+++|++||..+..+.+.+..|+.+|
T Consensus        86 ~~~d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK  163 (255)
T PRK07523         86 GPIDILVNNAGMQ--FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATK  163 (255)
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHH
Confidence            9999999999987  45567788999999999999999999999999999877789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.+++++||+|++|+||+++|++......       .+..........+. +++.+|+|+|+++++|+++
T Consensus       164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  235 (255)
T PRK07523        164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-------DPEFSAWLEKRTPA-GRWGKVEELVGACVFLASD  235 (255)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999998654321       11122222233334 8899999999999999999


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.++||+++.+|||+..+
T Consensus       236 ~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        236 ASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             hhcCccCcEEEECCCeecc
Confidence            8899999999999998653

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-41  Score=299.83  Aligned_cols=240  Identities=29%  Similarity=0.466  Sum_probs=206.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHh---CCCeeEEEecCCCHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH---------QLGQQTAKEL---GPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~---------~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~   98 (297)
                      .+++|+++||||++|||++++++|+++|++|++++|+.         +.+++..+++   +.++.++.+|++|+++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999999998876         5555555554   45678899999999999999


Q ss_pred             HHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC------CceEEEEecccc
Q 022418           99 VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR------SGCILCTASVTG  172 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~vss~~~  172 (297)
                      ++.+.++++++|++|||||+.  ....+.+.+.++|++.+++|+.+++.++++++|+|+++.      .|+||++||..+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGIL--RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            999999999999999999987  445678899999999999999999999999999986532      379999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCC-CCCC
Q 022418          173 LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE-GTHC  251 (297)
Q Consensus       173 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (297)
                      ..+.+.+..|++||++++.|+++++.|+.++||+||+|+|| ++|++........            . ...+.. .+..
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~------------~-~~~~~~~~~~~  226 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEM------------M-AKPEEGEFDAM  226 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHH------------H-hcCcccccCCC
Confidence            99999999999999999999999999999999999999999 8998764322110            0 011110 1457


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       252 ~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +|+|+|++++||+++...++||+++.+|||+....
T Consensus       227 ~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  261 (286)
T PRK07791        227 APENVSPLVVWLGSAESRDVTGKVFEVEGGKISVA  261 (286)
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEe
Confidence            89999999999999988999999999999998763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=297.35  Aligned_cols=252  Identities=29%  Similarity=0.415  Sum_probs=209.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            44789999999999999999999999999999999999988888777766678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHH----HHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEV----FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      |++|||||... ...++.+.+.++    |++++++|+.+++.++++++|.|+++ .|++|+++|..+..+.++...|+.|
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~s  159 (263)
T PRK06200         82 DCFVGNAGIWD-YNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTAS  159 (263)
T ss_pred             CEEEECCCCcc-cCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHH
Confidence            99999999753 223444556554    89999999999999999999998654 4899999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh-cCC-CHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY-AGV-DASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.|++.++.|+.+. |+||+|+||+++|++......... ... ..+...+......+. +++.+|+|+|+++.||
T Consensus       160 K~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~eva~~~~fl  237 (263)
T PRK06200        160 KHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQPEDHTGPYVLL  237 (263)
T ss_pred             HHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC-CCCCCHHHHhhhhhhe
Confidence            999999999999999884 999999999999998642110000 000 001112222333344 8999999999999999


Q ss_pred             hcCC-CCcccccEEEecCCcccc
Q 022418          264 ASDD-AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~-~~~~tG~~i~vdgG~~~~  285 (297)
                      +++. +.++||++|.+|||+.+.
T Consensus       238 ~s~~~~~~itG~~i~vdgG~~~~  260 (263)
T PRK06200        238 ASRRNSRALTGVVINADGGLGIR  260 (263)
T ss_pred             ecccccCcccceEEEEcCceeec
Confidence            9988 999999999999998654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.2e-41  Score=290.58  Aligned_cols=221  Identities=25%  Similarity=0.366  Sum_probs=199.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++++++|||||+|||.++|++|+++|++|++++|+.++++++.+++    +..++++.+|++++++++++.+++.+.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999998887    4567899999999999999999999988


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ..||+||||||+.  ..+++.+.++++.++++++|+.+...++++++|.|.+++.|+||+|+|.++..+.|..+.|++||
T Consensus        83 ~~IdvLVNNAG~g--~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFG--TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcC--CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            8999999999998  67789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +++.+|+++|+.|+.++||+|.+++||++.|+++........    .          ..+....++|+++|+..+..+..
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~----~----------~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVY----L----------LSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccc----c----------ccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998852111000    0          00125578999999999999865


Q ss_pred             C
Q 022418          267 D  267 (297)
Q Consensus       267 ~  267 (297)
                      .
T Consensus       227 ~  227 (265)
T COG0300         227 G  227 (265)
T ss_pred             C
Confidence            4

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-41  Score=291.11  Aligned_cols=252  Identities=33%  Similarity=0.506  Sum_probs=215.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..++...++.++.+|++|++++.++++++.++++++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999999999988887777766678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |++|||||..  ...++.+.+.++|++++++|+.+++.+++++.+.+.+++ .+++|++||..+..+.+++..|+.||++
T Consensus        82 d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  159 (257)
T PRK07067         82 DILFNNAALF--DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAA  159 (257)
T ss_pred             CEEEECCCcC--CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHH
Confidence            9999999986  445677889999999999999999999999999986543 5799999999988898999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh--hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++.+++.++.++.++||+|++|+||+++|+++.......  .................+ .+++.+|+|+|+++++|+++
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~  238 (257)
T PRK07067        160 VISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVP-LGRMGVPDDLTGMALFLASA  238 (257)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCC-CCCccCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999865432110  011111222222222333 48899999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...+++|+++++|||..+
T Consensus       239 ~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        239 DADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccccCcEEeecCCEeC
Confidence            989999999999999654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=5.5e-41  Score=290.37  Aligned_cols=244  Identities=30%  Similarity=0.458  Sum_probs=207.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.. ...+..++.+.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            588999999999999999999999999999999999753 2233334445678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.+.+++ .+++|++||..+..+.+....|+.+|++
T Consensus        82 d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  159 (248)
T TIGR01832        82 DILVNNAGII--RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHG  159 (248)
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHH
Confidence            9999999987  445567788999999999999999999999999987655 6899999999888887888899999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.++++++.++.++||+|++|+||+++|++......      .... ........+ .+++.+|+|+|+++++|+++..
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~-~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       160 VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA------DEDR-NAAILERIP-AGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc------ChHH-HHHHHhcCC-CCCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999997643211      0111 111122233 3789999999999999999988


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+++.+|||+..
T Consensus       232 ~~~~G~~i~~dgg~~~  247 (248)
T TIGR01832       232 DYVNGYTLAVDGGWLA  247 (248)
T ss_pred             cCcCCcEEEeCCCEec
Confidence            9999999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=8.6e-42  Score=298.04  Aligned_cols=252  Identities=26%  Similarity=0.413  Sum_probs=205.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+..+.++.++.+|+++.+++.++++++.++++++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999999999888777766555678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCC----HHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          110 DIMYNNAGVACKTPRSIVDLN----LEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      |++|||||... ...++.+.+    .++|++++++|+.+++.++++++|.|.++ .|++|+++|..+..+.+....|+++
T Consensus        81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~s  158 (262)
T TIGR03325        81 DCLIPNAGIWD-YSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAA  158 (262)
T ss_pred             CEEEECCCCCc-cCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHH
Confidence            99999999752 112233333    35799999999999999999999999765 4889999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC-CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG-VDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.|++.++.|+.++ |+||+|+||+++|++........... .......+......+. +++.+|+|+|+++.||+
T Consensus       159 Kaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~eva~~~~~l~  236 (262)
T TIGR03325       159 KHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI-GRMPDAEEYTGAYVFFA  236 (262)
T ss_pred             HHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC-CCCCChHHhhhheeeee
Confidence            999999999999999987 99999999999999864321000000 0000111222223344 88999999999999999


Q ss_pred             cC-CCCcccccEEEecCCcccc
Q 022418          265 SD-DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~-~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++ .+.++||++|.+|||+...
T Consensus       237 s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       237 TRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             cCCCcccccceEEEecCCeeec
Confidence            87 4678999999999997654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.6e-41  Score=296.16  Aligned_cols=257  Identities=46%  Similarity=0.766  Sum_probs=214.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.  .++.++++|++|+++++++++.+.+++
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            346889999999999999999999999999999999998877766666552  468899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||........+.+.+.++|++++++|+.+++.+++++.|.|.+++.|++++++|..+..+.+....|+++|
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHH
Confidence            99999999999864233457788999999999999999999999999999877779999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHH---HHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRL---LELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++++.+++.++.|+.++||+|++++||+++|++..........  .....   ........++.++.++|+|+|+++.+|
T Consensus       173 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l  250 (280)
T PLN02253        173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDER--TEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL  250 (280)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccc--hhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhh
Confidence            9999999999999999999999999999999975432211000  00111   111112222335668999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccC
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +++...+++|++|.+|||.+....
T Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        251 ASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             cCcccccccCcEEEECCchhhccc
Confidence            999999999999999999876543

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-41  Score=290.40  Aligned_cols=246  Identities=32%  Similarity=0.485  Sum_probs=212.7

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988777666554   446788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||... ...++.+.+.++|++.+++|+.+++.++++++|++++++.++++++||..+..+.+++..|+.|
T Consensus        83 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 HGRLDILVNNAAANP-YFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             cCCCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence            999999999999652 2345667889999999999999999999999999987778999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.++++++.++.++||+|++|+||+++|++......       .+..........+ .+++.+|+|+|+.+.+|++
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~  233 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK-------NDAILKQALAHIP-LRRHAEPSEMAGAVLYLAS  233 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC-------CHHHHHHHHccCC-CCCcCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998654321       1111122222223 3788999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +...+++|+++.+|||+.
T Consensus       234 ~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        234 DASSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccccCccCCEEEeCCCcC
Confidence            999999999999999974

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.2e-40  Score=289.58  Aligned_cols=248  Identities=33%  Similarity=0.515  Sum_probs=211.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++...++   +.++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999988776665554   45688899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      ++|||||..  ...++.+.+.++|++++++|+.+++.+++.+++.+.+.+ .+++|++||..+..+.+....|+++|+++
T Consensus        82 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVA--PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            999999986  445677888999999999999999999999999987654 57999999999999888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +.+++.++.++.++||+|++|+||+++|+++.....+....  ....+.........+. +++.+|+|+|+.+.||+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL-GRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999876543321111  1111111222223333 78899999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.++||++|.+|||+++
T Consensus       239 ~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        239 SDYITGQTIIVDGGMVF  255 (256)
T ss_pred             ccCccCcEEEeCCCeec
Confidence            99999999999999875

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-41  Score=289.96  Aligned_cols=241  Identities=27%  Similarity=0.352  Sum_probs=201.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH--
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK--  105 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~--  105 (297)
                      +++|+++||||++|||++++++|+++|++|++++ |+.+..++...++   +.++..+.+|+++.+++.++++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 5555555544443   456778899999999999999887653  


Q ss_pred             --cC--CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          106 --HN--QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       106 --~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                        ++  ++|++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.|++  .|++|++||..+..+.+....
T Consensus        82 ~~~g~~~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIG--PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchh
Confidence              34  899999999975  4455778899999999999999999999999999964  389999999999998888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.++++++.|+.++||+||+|+||+|+|++......       .+..........+ .+++.+|+|+|+++.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~dva~~~~  229 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-------DPMMKQYATTISA-FNRLGEVEDIADTAA  229 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-------CHHHHHHHHhcCc-ccCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999998653221       1111111122223 378899999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ||+++...+++|+.+.+|||..+
T Consensus       230 ~l~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        230 FLASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             HHcCccccCcCCcEEEecCCccC
Confidence            99999889999999999999753

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.2e-41  Score=296.64  Aligned_cols=244  Identities=26%  Similarity=0.348  Sum_probs=204.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHH---HHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH--QLGQQTA---KELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~--~~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.  +..++..   ++.+.++.++.+|++|++++.++++++.+
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999988753  2333333   23355688899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||... ....+.+.+.++|++++++|+.+++.+++++.|.|++  .+++|++||..+..+.+.+.+|++
T Consensus       125 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~a  201 (294)
T PRK07985        125 ALGGLDIMALVAGKQV-AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_pred             HhCCCCEEEECCCCCc-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHH
Confidence            9999999999999752 2345778899999999999999999999999999854  489999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.|++++||+||+|+||+++|++.....       ..+...+......+. +++.+|+|+|++++||+
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~-~r~~~pedva~~~~fL~  273 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-------QTQDKIPQFGQQTPM-KRAGQPAELAPVYVYLA  273 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-------CCHHHHHHHhccCCC-CCCCCHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999753110       011111112222333 78899999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.++||+++.+|||..+
T Consensus       274 s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        274 SQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             ChhcCCccccEEeeCCCeeC
Confidence            99999999999999999754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=289.49  Aligned_cols=245  Identities=32%  Similarity=0.515  Sum_probs=203.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||++|||++++++|+++|++|++++++.+...+....  ..+.++.+|++|+++++++++++.+.++++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE--KGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh--CCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999887765432222222  247889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~~~~~Y~~sK~a  188 (297)
                      |++|||||..  ...++.+.+.++|++++++|+.+++.+++.++|.|++++.+++|++||..+.. +.+....|++||++
T Consensus        81 d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  158 (255)
T PRK06463         81 DVLVNNAGIM--YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAG  158 (255)
T ss_pred             CEEEECCCcC--CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHH
Confidence            9999999986  44567788999999999999999999999999999877789999999988764 34566789999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|+++++.|+.++||+|+.|+||+++|++.......    ..............+. +++.+|+|+|+.+++|+++..
T Consensus       159 ~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~  233 (255)
T PRK06463        159 IIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLRELFRNKTVL-KTTGKPEDIANIVLFLASDDA  233 (255)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHHHHHHhCCCc-CCCcCHHHHHHHHHHHcChhh
Confidence            99999999999999999999999999999986432110    0111122222233333 788999999999999999988


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                      .+++|+.+.+|||..
T Consensus       234 ~~~~G~~~~~dgg~~  248 (255)
T PRK06463        234 RYITGQVIVADGGRI  248 (255)
T ss_pred             cCCCCCEEEECCCee
Confidence            999999999999975

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-40  Score=288.84  Aligned_cols=250  Identities=22%  Similarity=0.302  Sum_probs=210.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++    +.++.++.+|+++++++.++++.    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            5678999999999999999999999999999999999988777655544    45688899999999999888764    


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||+|..  ....+.+.+.++|++++++|+.+++.++++++|.|.+++.+++|++||..+..+.+.+..|+++
T Consensus        79 ~g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 AGDIDILVNNAGAI--PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             hCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence            47999999999986  4556888999999999999999999999999999987777899999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.++++++.|+.++||+||+|+||+++|++.......... ...............+. +++.+|+|+|+.++||+
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  235 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL-GRPATPEEVADLVAFLA  235 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999976554322111 11111111112222333 77889999999999999


Q ss_pred             cCCCCcccccEEEecCCccccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++.+.++||+.+.+|||+..+.
T Consensus       236 ~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        236 SPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             CchhccccCceEEecCCeeecC
Confidence            9989999999999999987553

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.8e-40  Score=294.16  Aligned_cols=243  Identities=27%  Similarity=0.390  Sum_probs=205.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ--LGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++|++|||||++|||++++++|+++|++|++++++.+  ..++..+.   .+.++.++.+|++++++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999887543  22333322   3567888999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||... ....+.+.+.++|++++++|+.+++.++++++|.|.+  .+++|++||..+..+.+.+..|++|
T Consensus       132 ~g~iD~lV~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 LGGLDILVNIAGKQT-AVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             hCCCCEEEECCcccC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence            999999999999753 2345778899999999999999999999999999854  4799999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.++.++||+||+|+||+++|++.....      ...+.. +......+. +++++|+|+|+++++|++
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~------~~~~~~-~~~~~~~p~-~r~~~p~dva~~~~~l~s  280 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG------QPPEKI-PDFGSETPM-KRPGQPVEMAPLYVLLAS  280 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC------CCHHHH-HHHhcCCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999864211      011111 222222333 889999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...+++|+.|.+|||+.+
T Consensus       281 ~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        281 QESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             ccccCccCcEEeeCCCEeC
Confidence            9889999999999999864

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-40  Score=287.03  Aligned_cols=244  Identities=36%  Similarity=0.512  Sum_probs=209.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.+..+...+..+.++.++.+|++++++++++++++.+.++++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999999998764332222224456789999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||+|..  ...++.+.+.++|++++++|+.+++.+++++.|.|.+++.+++|++||..+..+.+.+.+|+.+|+++
T Consensus        91 d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  168 (255)
T PRK06841         91 DILVNSAGVA--LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGV  168 (255)
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHH
Confidence            9999999986  44557778899999999999999999999999999877789999999999988989999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.++.++||+|+.|+||+++|++......       ... ........+. +++.+|+|+|+++++|+++...
T Consensus       169 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  239 (255)
T PRK06841        169 VGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-------GEK-GERAKKLIPA-GRFAYPEEIAAAALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-------hhH-HHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999997653221       111 1112222333 7899999999999999999999


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      +++|+.+.+|||+++
T Consensus       240 ~~~G~~i~~dgg~~~  254 (255)
T PRK06841        240 MITGENLVIDGGYTI  254 (255)
T ss_pred             CccCCEEEECCCccC
Confidence            999999999999854

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-40  Score=316.16  Aligned_cols=250  Identities=31%  Similarity=0.481  Sum_probs=217.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ...||+++||||++|||++++++|+++|++|++++|+.+.+++..++.+.++..+.+|++|+++++++++++.++++++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999999999888888877777788899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||... ...++.+.+.++|++++++|+.+++.+++.++|.|  ++.|++|++||..+..+.+++..|+++|++++
T Consensus       346 ~li~nAg~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        346 VLVNNAGIAE-VFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             EEEECCCCcC-CCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            9999999763 23457788999999999999999999999999999  34589999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .|++.++.|+.++||+||+|+||+++|++.......     ....... .....+. +++.+|+|+|+.++||+++...+
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~-~~~~~~~-~~~~~~~dia~~~~~l~s~~~~~  495 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-----GRADFDS-IRRRIPL-GRLGDPEEVAEAIAFLASPAASY  495 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-----cHHHHHH-HHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999986542210     1111111 2223333 78899999999999999998899


Q ss_pred             ccccEEEecCCcccccCCCC
Q 022418          271 VSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       271 ~tG~~i~vdgG~~~~~~~~~  290 (297)
                      +||+++.+|||+..+.++..
T Consensus       496 ~~G~~i~vdgg~~~~~~~~~  515 (520)
T PRK06484        496 VNGATLTVDGGWTAFGDAGD  515 (520)
T ss_pred             ccCcEEEECCCccCCCCCcc
Confidence            99999999999988776544

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-40  Score=285.89  Aligned_cols=256  Identities=30%  Similarity=0.420  Sum_probs=218.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+.+   +.++.++++|++++++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            446889999999999999999999999999999999999988777665554   45788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||..  ...++.+.+.++|++++++|+.+++.+++.++|.|++.+.+++|++||..+..+.+.+..|+.
T Consensus        84 ~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         84 EVGVIDILVNNAGII--KRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             hCCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            999999999999987  445677889999999999999999999999999998777899999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.++++++.++.++||+|++|+||+++|++........... .............+. +++.+|+|+|+.+.+|+
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  239 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADG-SRHPFDQFIIAKTPA-ARWGDPEDLAGPAVFLA  239 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccc-cchhHHHHHHhcCCc-cCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999876533211111 111122222233333 77899999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++...+++|+++.+|||....-+
T Consensus       240 ~~~~~~~~g~~~~~~gg~~~~~~  262 (265)
T PRK07097        240 SDASNFVNGHILYVDGGILAYIG  262 (265)
T ss_pred             CcccCCCCCCEEEECCCceeccC
Confidence            99889999999999999776544

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-40  Score=286.14  Aligned_cols=242  Identities=33%  Similarity=0.547  Sum_probs=209.8

Q ss_pred             cCCCCCEEEEEcCCC-cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----C-CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAAS-GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----G-PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~-giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~-~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ..+++|+++||||+| |||+++++.|+++|++|++++|+.+.+++..+++    + .++.++++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            356789999999985 9999999999999999999999988776665543    2 367889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++++++|++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.|+.+. .+++++++|..+..+.+++..|
T Consensus        93 ~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLG--GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            9999999999999976  455678889999999999999999999999999998765 7899999999988888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +++|++++.+++.++.|+.++||+||+|+||+++|++.....       ..+ ..+......+. +++.+|+|+|+++.|
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-------~~~-~~~~~~~~~~~-~r~~~p~~va~~~~~  241 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-------SAE-LLDELAAREAF-GRAAEPWEVANVIAF  241 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-------CHH-HHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999764321       111 11222233344 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCc
Q 022418          263 LASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~  282 (297)
                      |+++.+.++||+++.+|+++
T Consensus       242 l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        242 LASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HcCchhcCcCCceEEeCCCC
Confidence            99999999999999999986

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-40  Score=285.47  Aligned_cols=240  Identities=30%  Similarity=0.417  Sum_probs=206.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|++++|+++||||++|||++++++|+++|++|++++|+.+.     ...+..+.++++|++++++++++++.+.+.+++
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999998754     122456888999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++|||||..  ....+.+.+.++|++.+++|+.+++.+++++.|.|.++ ..+++|++||..+..+.+.+..|+.+|+
T Consensus        76 id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK07856         76 LDVLVNNAGGS--PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKA  153 (252)
T ss_pred             CCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence            99999999976  44557778899999999999999999999999998764 4589999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.|+.++ |+|+.|+||+++|++......      ..+.. .......+. +++.+|+|+|+.+++|+++.
T Consensus       154 a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~------~~~~~-~~~~~~~~~-~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        154 GLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYG------DAEGI-AAVAATVPL-GRLATPADIAWACLFLASDL  224 (252)
T ss_pred             HHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhcc------CHHHH-HHHhhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999887 999999999999997643221      11111 112223333 78899999999999999998


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..++||+.|.+|||...
T Consensus       225 ~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        225 ASYVSGANLEVHGGGER  241 (252)
T ss_pred             cCCccCCEEEECCCcch
Confidence            89999999999999764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-40  Score=285.80  Aligned_cols=248  Identities=27%  Similarity=0.383  Sum_probs=208.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.      ....++.++++|++|+++++++++++.++++++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999998653      123467889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~a  188 (297)
                      |++|||||........+.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+ .+..|+++|++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a  158 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAA  158 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHH
Confidence            99999999753234456778899999999999999999999999999877778999999999887755 67899999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHH---HhcCCCCCCCCCHHHHHHHHHHH
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELV---YSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++.+++.++.++.++||+|++|+||+++|++......+...  ....+...+..   ....+. +++.+|+|+|+++.||
T Consensus       159 ~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l  237 (260)
T PRK06523        159 LSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL-GRPAEPEEVAELIAFL  237 (260)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999987654332111  11112211111   122333 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...+++|+.+.+|||...
T Consensus       238 ~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        238 ASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             hCcccccccCceEEecCCccC
Confidence            999889999999999999754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-40  Score=285.54  Aligned_cols=237  Identities=26%  Similarity=0.347  Sum_probs=203.2

Q ss_pred             CCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCC-----------chhHHHHHH---HhCCCeeEEEecCCCHHH
Q 022418           31 KLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQ-----------HQLGQQTAK---ELGPNATFIACDVTKESD   94 (297)
Q Consensus        31 ~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~-----------~~~~~~~~~---~~~~~v~~~~~D~s~~~~   94 (297)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+           .+.+.+..+   +.+.++.++++|++++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5889999999999  499999999999999999987643           122222222   235678899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL  174 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~  174 (297)
                      ++++++++.+.++++|++|||||..  ...++.+.+.++|++++++|+.+++.+.++++|.+.+++.|++|++||..+..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYS--TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            9999999999999999999999986  44567889999999999999999999999999999877789999999999998


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      +.+++..|+.+|++++.|+++++.++.++||+|++|+||+++|++..+..            .+......+ .++..+|+
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~------------~~~~~~~~~-~~~~~~~~  227 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI------------KQGLLPMFP-FGRIGEPK  227 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH------------HHHHHhcCC-CCCCcCHH
Confidence            88889999999999999999999999999999999999999998643221            111112222 36788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      |+|+.+.+|+++...+++|+++.+|||+
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            9999999999998899999999999995

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=7e-40  Score=285.06  Aligned_cols=246  Identities=28%  Similarity=0.451  Sum_probs=213.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988777666554     34688899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|++|||||..  ...+..+.+.++|++.+++|+.+++.++++++|+|++++.+++|++||..+..+.+....|++
T Consensus        85 ~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         85 HWDGLHILVNNAGGN--IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            999999999999975  444567889999999999999999999999999998777789999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.++++++.++.+.||+|++|+||+++|++......       .+...+......+. +++.+|+|+++++.+|+
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  234 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-------DPDYYEQVIERTPM-RRVGEPEEVAAAVAFLC  234 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-------ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998754321       11111212222333 78889999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++...+++|+.+.+|||...+
T Consensus       235 ~~~~~~~~g~~i~~~gg~~~~  255 (257)
T PRK09242        235 MPAASYITGQCIAVDGGFLRY  255 (257)
T ss_pred             CcccccccCCEEEECCCeEee
Confidence            988889999999999997654

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=284.46  Aligned_cols=249  Identities=35%  Similarity=0.515  Sum_probs=208.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+. .+..+++   +.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999998753 2222222   45678899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK  186 (297)
                      ++|++|||||..  ...++.+.+.+++++.+++|+.+++.++++++|.+.+++.+++|++||..+. .+.+.+..|+.+|
T Consensus        82 ~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         82 RIDILVNNAGVC--RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCCEEEECCCcC--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            999999999986  4556778889999999999999999999999999877667899999998874 5667788999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.||+|++|+||+++|++........... ..++.........+. +++.+|+|+|+.+.||+++
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~~  237 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPE-DPESVLTEMAKAIPL-RRLADPLEVGELAAFLASD  237 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCC-CcHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999876543221111 112222222333344 7889999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      .+.+++|+++.+|||+.+
T Consensus       238 ~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        238 ESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             hhcCCcCceEeECCCccc
Confidence            889999999999999764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-40  Score=292.29  Aligned_cols=246  Identities=18%  Similarity=0.226  Sum_probs=193.4

Q ss_pred             ccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-------------hCC-----CeeEEEec
Q 022418           29 SRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE-------------LGP-----NATFIACD   88 (297)
Q Consensus        29 ~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~-------------~~~-----~v~~~~~D   88 (297)
                      ..+++||+++|||++  +|||+++|+.|+++|++|++.++.. .++...+.             .+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            457899999999995  9999999999999999999977542 01110000             000     11112233


Q ss_pred             CCCH------------------HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHH
Q 022418           89 VTKE------------------SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK  150 (297)
Q Consensus        89 ~s~~------------------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  150 (297)
                      +++.                  ++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3333                  3689999999999999999999999753234568889999999999999999999999


Q ss_pred             HHHHhccCCCCceEEEEecccccccCCCCc-cchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhh
Q 022418          151 HSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIY  228 (297)
Q Consensus       151 ~~~~~l~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~  228 (297)
                      +++|.|++  .|++|+++|..+..+.+.+. .|++||++++.|+++++.|+++ +||+||+|+||+++|++.....    
T Consensus       162 a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~----  235 (299)
T PRK06300        162 HFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG----  235 (299)
T ss_pred             HHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc----
Confidence            99999964  47899999999988877765 8999999999999999999987 5999999999999999764210    


Q ss_pred             cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                         ..+..........+. ++..+|+|+|+.+.||+++.+.++||+++.+|||+..+
T Consensus       236 ---~~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        236 ---FIERMVDYYQDWAPL-PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM  288 (299)
T ss_pred             ---ccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence               011111222223334 78899999999999999999999999999999998775

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=284.03  Aligned_cols=248  Identities=33%  Similarity=0.481  Sum_probs=210.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+++   +.++.++.+|++|.+++.++++++.++
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999888543 334333333   556888999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++++|++|||||..  ....+.+.+.++|++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.+.+.+|+.
T Consensus        83 ~g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         83 FGTLDVMINNAGIE--NAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            99999999999976  445577888999999999999999999999999997654 689999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++.++||+|++|+||+++|++....+.      ..+. ........+. +++.+|+|+|+.+.||+
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~  232 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA------DPKQ-RADVESMIPM-GYIGKPEEIAAVAAWLA  232 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC------CHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999998643211      1111 1112223333 78999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++...+++|+.+.+|||+..+..
T Consensus       233 s~~~~~~~G~~i~~d~g~~~~~~  255 (261)
T PRK08936        233 SSEASYVTGITLFADGGMTLYPS  255 (261)
T ss_pred             CcccCCccCcEEEECCCcccCcc
Confidence            99999999999999999886543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.5e-39  Score=282.76  Aligned_cols=244  Identities=34%  Similarity=0.486  Sum_probs=210.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+.+..+....++   +.++.++.+|+++.+++.++++.+.+
T Consensus         5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999988776655443   45688899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||...  ...+ +.+.++|++.+++|+.+++.+++++.|+|.+.+.+++|++||..+..+.+++..|++
T Consensus        85 ~~~~~d~li~~ag~~~--~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  161 (255)
T PRK06113         85 KLGKVDILVNNAGGGG--PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_pred             HcCCCCEEEECCCCCC--CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHH
Confidence            9999999999999763  3333 678999999999999999999999999997666789999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++.++||+||+|+||+++|++......       . ..........+. +++.+|+|+++++++|+
T Consensus       162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~-~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~  232 (255)
T PRK06113        162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-------P-EIEQKMLQHTPI-RRLGQPQDIANAALFLC  232 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC-------H-HHHHHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999998654221       1 111222223333 77899999999999999


Q ss_pred             cCCCCcccccEEEecCCcc
Q 022418          265 SDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++...+++|+.|++|||..
T Consensus       233 ~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CccccCccCCEEEECCCcc
Confidence            9989999999999999943

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=282.84  Aligned_cols=249  Identities=24%  Similarity=0.354  Sum_probs=202.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.. .++..+++   +.++.++.+|+++++++.++++++.+++
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999853 33333333   4568889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||... ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+++|++||..+..  +...+|++||
T Consensus        83 ~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK  159 (260)
T PRK12823         83 GRIDVLINNVGGTI-WAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAK  159 (260)
T ss_pred             CCCeEEEECCcccc-CCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHH
Confidence            99999999999642 34557788999999999999999999999999999877778999999987642  3456899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcC---CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAG---VDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++++.|++.++.++.++||+|++|+||+++|++........ ...   ...+..........+. +++.+|+|+|+++.+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  238 (260)
T PRK12823        160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM-KRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc-ccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999998642211000 000   0011111222223333 788999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcc
Q 022418          263 LASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      |+++...+++|+.+++|||..
T Consensus       239 l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HcCcccccccCcEEeecCCCC
Confidence            999988999999999999963

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4e-40  Score=288.01  Aligned_cols=248  Identities=32%  Similarity=0.461  Sum_probs=206.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+      ..++.++.+|++|+++++++++++.++++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999999999999876532      2367889999999999999999999999999


Q ss_pred             cEEEECccCCCCC-------CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          110 DIMYNNAGVACKT-------PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       110 d~li~~ag~~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      |++|||||.....       .....+.+.++|++++++|+.+++.+++++.++|.+++.+++|++||..+..+.+.+..|
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCY  158 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchh
Confidence            9999999975311       112345789999999999999999999999999987778999999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhc---CCCHHHHHHHHHh--cCCCCCCCCCHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYA---GVDASRLLELVYS--TGVLEGTHCEPNDI  256 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~di  256 (297)
                      +.+|++++.+++.++.++.++||+||+|+||+++ |++..........   ....+...+....  ..+. +++++|+|+
T Consensus       159 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~ev  237 (266)
T PRK06171        159 AATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL-GRSGKLSEV  237 (266)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC-CCCCCHHHh
Confidence            9999999999999999999999999999999997 6654332221110   1112222222222  2344 889999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++.||+++.+.++||++|.+|||+..
T Consensus       238 a~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        238 ADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             hhheeeeeccccccceeeEEEecCcccC
Confidence            9999999999999999999999999763

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-39  Score=281.82  Aligned_cols=245  Identities=29%  Similarity=0.410  Sum_probs=205.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      |.+++|+++||||++|||++++++|+++|++|+++++ +.+..+....+.+.++.++++|++++++++++++++.+.+++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4578899999999999999999999999999988765 445555555555567889999999999999999999988887


Q ss_pred             -ccEEEECccCCCC----CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          109 -LDIMYNNAGVACK----TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       109 -id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                       +|++|||||....    ....+.+.+.++|++.+++|+.+++.++++++|.+.+.+.+++|+++|..+..+..++..|+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  160 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYT  160 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchH
Confidence             9999999986421    12346778899999999999999999999999999777779999999988777777788999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++|++++.+++.+++++.++||+||+|+||+++|+.....        ..+..........+. +++.+|+|+|+++.+|
T Consensus       161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  231 (253)
T PRK08642        161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--------TPDEVFDLIAATTPL-RKVTTPQEFADAVLFF  231 (253)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--------CCHHHHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999854321        111222222233333 7899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcc
Q 022418          264 ASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +++...+++|++|.+|||+.
T Consensus       232 ~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        232 ASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             cCchhcCccCCEEEeCCCee
Confidence            99988999999999999974

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=282.07  Aligned_cols=245  Identities=27%  Similarity=0.405  Sum_probs=213.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999987776665544   456889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||+|..  ...++.+.+.++|++.+++|+.+++.+.+.+++.+.+++.+++|++||..+..+.+.+.+|+++
T Consensus        86 ~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         86 HGRLDILVNNVGAR--DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence            99999999999976  4456778899999999999999999999999999987778999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.|+.+.||+|++|+||+++|++......       .+..........+ .+++.+|+|+++++++|++
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~~  235 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-------DPAVGPWLAQRTP-LGRWGRPEEIAGAAVFLAS  235 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-------ChHHHHHHHhcCC-CCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999997543211       1111222222233 3788999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +.+.++||+.+.+|||+.
T Consensus       236 ~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        236 PAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             cccCCcCCCEEEECCCcc
Confidence            999999999999999975

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=289.74  Aligned_cols=243  Identities=19%  Similarity=0.236  Sum_probs=195.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHHHHh---CCCeeEEEecCCCHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH----------QLGQQTAKEL---GPNATFIACDVTKESDV   95 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~----------~~~~~~~~~~---~~~v~~~~~D~s~~~~i   95 (297)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.          +.+++..+.+   +.++.++.+|+++++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            3568999999999999999999999999999999999984          3334333333   45678899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECc-cCCC--CCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418           96 SDAVDFTISKHNQLDIMYNNA-GVAC--KTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      +++++++.+++|++|++|||| |...  ....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            999999999999999999999 7421  1124567788999999999999999999999999998776799999999766


Q ss_pred             cc---cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCC
Q 022418          173 LL---GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT  249 (297)
Q Consensus       173 ~~---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (297)
                      ..   +.+....|++||+++.+|+++++.|++++||+||+|+||+++|++.......     ..+...... ...+..++
T Consensus       163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~-~~~p~~~~  236 (305)
T PRK08303        163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGV-----TEENWRDAL-AKEPHFAI  236 (305)
T ss_pred             cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhcc-----Cccchhhhh-cccccccc
Confidence            43   2334678999999999999999999999999999999999999985432110     001111111 12232366


Q ss_pred             CCCHHHHHHHHHHHhcCCC-CcccccEEE
Q 022418          250 HCEPNDIANAALYLASDDA-KYVSGHNLV  277 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~-~~~tG~~i~  277 (297)
                      ..+|+|+|++++||+++.. .++||++|.
T Consensus       237 ~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        237 SETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            7789999999999999874 589999987

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=284.79  Aligned_cols=234  Identities=26%  Similarity=0.374  Sum_probs=192.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999987776665544   446888999999999999999988 5678999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC--------------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--------------  176 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~--------------  176 (297)
                      ++|||||...         ..++|++++++|+.+++.+++++.|.|.+  .+++|+++|..+..+.              
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999751         23678999999999999999999999964  3678999998876542              


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHH
Q 022418          177 ----------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV  240 (297)
Q Consensus       177 ----------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  240 (297)
                                      +++..|++||+|++.+++.++.|+.++||+||+|+||+++|++.......    ...+.. ...
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~----~~~~~~-~~~  222 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG----PRGDGY-RNM  222 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC----CchHHH-HHH
Confidence                            24578999999999999999999999999999999999999986432211    011111 112


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          241 YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       241 ~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ....+. +++++|+|+|+++.||+++.+.++||+.+.+|||.+.+.+
T Consensus       223 ~~~~p~-~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~~~  268 (275)
T PRK06940        223 FAKSPA-GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATASYR  268 (275)
T ss_pred             hhhCCc-ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEEEe
Confidence            223344 8899999999999999999999999999999999876644

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=4.9e-39  Score=279.73  Aligned_cols=244  Identities=29%  Similarity=0.417  Sum_probs=206.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+|+++||||++|||++++++|+++|++|+++.+ +.+..+...+++   +.+++++.+|++++++++++++++.+++++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999988865 444444444333   567899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++|||+|..  ....+.+.+.++|++++++|+.+++.+++++.+.|.+++ .+++|++||..+..+.++...|+.+|+
T Consensus        81 id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  158 (256)
T PRK12743         81 IDVLVNNAGAM--TKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH  158 (256)
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence            99999999987  345577789999999999999999999999999996543 589999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.++||+|++|+||+++|++.....         ...........+. ++..+|+|+|+++.+|+++.
T Consensus       159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~  228 (256)
T PRK12743        159 ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---------SDVKPDSRPGIPL-GRPGDTHEIASLVAWLCSEG  228 (256)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---------hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999764311         1111111222233 67889999999999999998


Q ss_pred             CCcccccEEEecCCcccccCC
Q 022418          268 AKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ..+++|+.+.+|||..++..+
T Consensus       229 ~~~~~G~~~~~dgg~~~~~~~  249 (256)
T PRK12743        229 ASYTTGQSLIVDGGFMLANPQ  249 (256)
T ss_pred             ccCcCCcEEEECCCccccCCc
Confidence            899999999999998877543

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-39  Score=279.04  Aligned_cols=243  Identities=26%  Similarity=0.386  Sum_probs=205.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ||+++||||++|||++++++|+++|++|++++|+.+.+++..+.+   +.++.++.+|++|+++++++++++.++++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            689999999999999999999999999999999987776665544   45788999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      ++|||+|..  ...++.+.+.++|++++++|+.+++.++++++|.|.++ ..+++|++||..+..+.+....|+++|+++
T Consensus        81 ~lI~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGN--FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCC--CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            999999975  34457788999999999999999999999999998654 368999999999988888888999999999


Q ss_pred             HHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          190 IGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       190 ~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +.|++.++.|+.+ +||+|++|+||+++|+......   .   ..+..........+. +++.+|+|+|+++.+|+++..
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~---~---~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~  231 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL---W---ESEEAAKRTIQSVPL-GRLGTPEEIAGLAYFLLSDEA  231 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccc---c---CCHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCccc
Confidence            9999999999974 6999999999999965322111   0   111112222223333 788999999999999999988


Q ss_pred             CcccccEEEecCCcccc
Q 022418          269 KYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~  285 (297)
                      .+++|+.+.+|||...-
T Consensus       232 ~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        232 AYINGTCITMDGGQWLN  248 (252)
T ss_pred             cccCCCEEEECCCeecC
Confidence            89999999999997654

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=6.6e-39  Score=278.70  Aligned_cols=245  Identities=32%  Similarity=0.439  Sum_probs=209.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...+++||+++||||+++||++++++|+++|++|++++|+.++.++..++.+.++.++.+|+++++++.++++++.++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34568999999999999999999999999999999999988777776666666788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||.......++.+.+.++|++.+++|+.+++.+++++.|.|.++ .+++|++||..+..+.+.+..|+++|+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKG  162 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            9999999999864233456778999999999999999999999999998654 489999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.. +|+|++|+||+++|++.....        ............+ .+++.+|+|+|+.+.+++++.
T Consensus       163 a~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        163 GLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR--------AEPLSEADHAQHP-AGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc--------chHHHHHHhhcCC-CCCCcCHHHHHHHHHHHcCch
Confidence            999999999999886 499999999999998643211        0111111112223 378999999999999999988


Q ss_pred             CCcccccEEEecCCcc
Q 022418          268 AKYVSGHNLVVDGGFT  283 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~  283 (297)
                      ..+++|+.+.+|||..
T Consensus       233 ~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        233 AGFVTGQEFVVDGGMT  248 (255)
T ss_pred             hcCccCcEEEECCCce
Confidence            8899999999999975

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-39  Score=277.09  Aligned_cols=246  Identities=30%  Similarity=0.456  Sum_probs=210.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|.+++.++++.+.+.++++|
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999999999998877777777777788999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||..  ...++.+.+.++|++++++|+.+++.+++++.|.|..  .+++|+++|..+..+.+....|+.+|++++
T Consensus        83 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         83 AVFINAGVA--KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALL  158 (249)
T ss_pred             EEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHH
Confidence            999999976  4455677899999999999999999999999998853  478999999998888888999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .++++++.|+.++||++++++||+++|++......  ... .............+. +++.+|+|+|+++.+|+++...+
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~-~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  234 (249)
T PRK06500        159 SLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGL--PEA-TLDAVAAQIQALVPL-GRFGTPEEIAKAVLYLASDESAF  234 (249)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhcc--Ccc-chHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999997653210  000 111112222223333 67889999999999999988899


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      ++|+.|.+|||.+.
T Consensus       235 ~~g~~i~~~gg~~~  248 (249)
T PRK06500        235 IVGSEIIVDGGMSN  248 (249)
T ss_pred             ccCCeEEECCCccc
Confidence            99999999999764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-39  Score=278.71  Aligned_cols=248  Identities=26%  Similarity=0.406  Sum_probs=209.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----C-CCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----G-PNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+++||||+++||.+++++|+++|++|++++|+.+.+++..+++    + .+++++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987766655443    2 46889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++|||||..  ....+.+.+.++|++++++|+.+++.+++++.+.|.+++ .+++|++||..+..+.+....|+++|+
T Consensus        82 id~vv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIA--KAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcC--CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            99999999977  445677889999999999999999999999999997765 689999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCc-cCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAI-PTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +++.++++++.++.++||+|++|+||++ .|++.....+....  ....++.........+. +++++|+|+++++++|+
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999975 66665443332111  11223333333333344 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+++++|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.5e-40  Score=280.97  Aligned_cols=194  Identities=33%  Similarity=0.441  Sum_probs=177.1

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CC-CeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GP-NATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~-~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .++.+.||+|+|||||+|||.++|.+|+++|++++++.|+.++++...+++    .. +++.++||++|++++.++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999888887775554    33 4999999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ..++|++|+||||||+.  .....++.+.+++...|++|+.|++.++++++|+|++++.|+||++||++|..+.|....|
T Consensus        86 ~~~fg~vDvLVNNAG~~--~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGIS--LVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             HHhcCCCCEEEecCccc--cccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            99999999999999998  4556778889999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCC--cEEEEEeCCCccCcchhhHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYG--IRINCISPFAIPTPFVMEEM  224 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~--i~v~~v~pG~v~t~~~~~~~  224 (297)
                      ++||+|+++|+.+++.|+.+.+  |++ .|+||+|+|++.....
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            9999999999999999999877  556 9999999999776544

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-39  Score=277.93  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=211.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.+++++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999999999988777666554   45788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||... ...++.+.+.++|++++++|+.+++.+++++.+.+.+. .+++|++||..+..+.+++..|+++|+
T Consensus        82 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~  159 (258)
T PRK07890         82 RVDALVNNAFRVP-SMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKG  159 (258)
T ss_pred             CccEEEECCccCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHH
Confidence            9999999999753 23457778899999999999999999999999998654 379999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.+++.++.++.++||++++++||+++|++...........  ...+..........+. +++.+|+|+|++++++++
T Consensus       160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999876543321111  1112222222222333 678899999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +...+++|+++.+|||..
T Consensus       239 ~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        239 DLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HhhhCccCcEEEeCCccc
Confidence            877899999999999964

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6.4e-39  Score=277.96  Aligned_cols=247  Identities=28%  Similarity=0.337  Sum_probs=208.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||+++||++++++|+++|++|++++|+.      ....+.++.++++|++++++++++++++.+.++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999999986      12234578899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||+|..  ...++.+.+.+++++.+++|+.+++.+++++.+.+++++.+++|++||..+..+.++...|+.+|+++
T Consensus        78 d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~  155 (252)
T PRK08220         78 DVLVNAAGIL--RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAAL  155 (252)
T ss_pred             CEEEECCCcC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHH
Confidence            9999999986  45567788999999999999999999999999999877788999999999888888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +.+++.++.|+.++||+|++++||+++|++.......... ........+..... .+.+++.+|+|+|+++++|+++..
T Consensus       156 ~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~  234 (252)
T PRK08220        156 TSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG-IPLGKIARPQEIANAVLFLASDLA  234 (252)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc-CCCcccCCHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999986543211100 00000001111122 233789999999999999999988


Q ss_pred             CcccccEEEecCCcccc
Q 022418          269 KYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~  285 (297)
                      .+++|+++.+|||..+.
T Consensus       235 ~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        235 SHITLQDIVVDGGATLG  251 (252)
T ss_pred             cCccCcEEEECCCeecC
Confidence            99999999999997753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=6.7e-39  Score=275.45  Aligned_cols=232  Identities=21%  Similarity=0.228  Sum_probs=195.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+...+..+..  .+.++.+|++|+++++++++++.+.++++|++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            589999999999999999999999999999999876544433333  367889999999999999999999999999999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||||..  ......+.+.++|++++++|+.+++.+++.+.|.|++.+  .+++|++||..+..+.+.+..|+++|++++.
T Consensus        80 ~~ag~~--~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~  157 (236)
T PRK06483         80 HNASDW--LAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN  157 (236)
T ss_pred             ECCccc--cCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH
Confidence            999975  233455678999999999999999999999999997655  6899999999988888888999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      |++.++.|+++ +|+||+|+||++.|+....           +..........+. ++...|+|+|+.+.||++  ..++
T Consensus       158 l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~--~~~~  222 (236)
T PRK06483        158 MTLSFAAKLAP-EVKVNSIAPALILFNEGDD-----------AAYRQKALAKSLL-KIEPGEEEIIDLVDYLLT--SCYV  222 (236)
T ss_pred             HHHHHHHHHCC-CcEEEEEccCceecCCCCC-----------HHHHHHHhccCcc-ccCCCHHHHHHHHHHHhc--CCCc
Confidence            99999999987 5999999999998753210           1111111222333 678899999999999996  5799


Q ss_pred             cccEEEecCCccc
Q 022418          272 SGHNLVVDGGFTS  284 (297)
Q Consensus       272 tG~~i~vdgG~~~  284 (297)
                      ||+++.+|||..+
T Consensus       223 ~G~~i~vdgg~~~  235 (236)
T PRK06483        223 TGRSLPVDGGRHL  235 (236)
T ss_pred             CCcEEEeCccccc
Confidence            9999999999875

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.5e-41  Score=264.39  Aligned_cols=241  Identities=26%  Similarity=0.331  Sum_probs=211.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++.|+.+++||+..|||+++++.|++.|+.|+.++|+++.+.++.++...-+..+..|+++.+.+.+.+..    .+++
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~----v~pi   78 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVP----VFPI   78 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcc----cCch
Confidence            578999999999999999999999999999999999999999999998866688899999997776666554    4689


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |.++||||+.  ...++.+.+.+++++.|++|+.+.+.+.|...+-+.. +..|.||++||.++..+......||++|+|
T Consensus        79 dgLVNNAgvA--~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaA  156 (245)
T KOG1207|consen   79 DGLVNNAGVA--TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAA  156 (245)
T ss_pred             hhhhccchhh--hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHH
Confidence            9999999998  6667999999999999999999999999996665543 347889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +++++|+++.|+++++||||++.|-.|.|+|-+..+.       .+.....+....|. +++..++|++++++||+++..
T Consensus       157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS-------DP~K~k~mL~riPl-~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS-------DPDKKKKMLDRIPL-KRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC-------CchhccchhhhCch-hhhhHHHHHHhhheeeeecCc
Confidence            9999999999999999999999999999998876542       22222333444555 899999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+.||.++.++|||+.
T Consensus       229 smttGstlpveGGfs~  244 (245)
T KOG1207|consen  229 SMTTGSTLPVEGGFSN  244 (245)
T ss_pred             CcccCceeeecCCccC
Confidence            9999999999999974

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=276.43  Aligned_cols=250  Identities=28%  Similarity=0.396  Sum_probs=208.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.. +..+++   +.+++++.+|+++++++.++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999988765 333333   5678999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||..  ....+.+.. ++|++.+++|+.+++.+.+.+.|.+++. .++++++||..+..+.+++..|+.||
T Consensus        82 ~~id~vi~~ag~~--~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         82 GRIDGLVNNAGVN--DGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             CCCCEEEECCccc--CCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHH
Confidence            9999999999975  233344444 9999999999999999999999988654 48999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.|+.++||+|+.|+||.++|++........ .  .............+..+++++|+|+|+.+++++++
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  234 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATF-D--DPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSE  234 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhc-c--CHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999999765432211 1  11111111222223324789999999999999999


Q ss_pred             CCCcccccEEEecCCcccccC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ...+++|+.+.+|||+++++.
T Consensus       235 ~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        235 RSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             hhccccCceEEecCCcccccc
Confidence            889999999999999887654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-38  Score=274.89  Aligned_cols=244  Identities=28%  Similarity=0.400  Sum_probs=208.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEE-EeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~-~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++|+++||||+++||++++++|+++|++|++ ..|+.+..++..+++   +.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999876 577777666555443   45688899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ...++.+.+.+++++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+.+++..|+++|+
T Consensus        82 ~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASG--VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            999999999976  445677889999999999999999999999999998777889999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.++++++.++.+.||++++|+||+++|++.....       ............. +.++.++++|+|+.+++++++.
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~~~~~~  231 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP-------NREELLEDARAKT-PAGRMVEPEDVANAVLFLCSPE  231 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc-------CchHHHHHHhcCC-CCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999998764321       1111111122222 2367899999999999999988


Q ss_pred             CCcccccEEEecCCcccc
Q 022418          268 AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~  285 (297)
                      ..+++|+.+.+|||.+++
T Consensus       232 ~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        232 ADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             hcCccCCEEEECCCeeee
Confidence            889999999999998865

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-38  Score=272.99  Aligned_cols=248  Identities=35%  Similarity=0.500  Sum_probs=213.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |++++|+++||||+|+||.+++++|+++|++|++++|+.+..++....+.  .++.++.+|++|++++.++++++.+.++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46889999999999999999999999999999999999987777665543  5688999999999999999999988999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||+|... ...++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.++...|+.+|+
T Consensus        81 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (251)
T PRK07231         81 SVDILVNNAGTTH-RNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKG  159 (251)
T ss_pred             CCCEEEECCCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHH
Confidence            9999999999753 334466788999999999999999999999999998777789999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||++++++||+++|++........    ..+. ........+ .+++.+|+|+|+++++|+++.
T Consensus       160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----~~~~-~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~  233 (251)
T PRK07231        160 AVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP----TPEN-RAKFLATIP-LGRLGTPEDIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc----ChHH-HHHHhcCCC-CCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999988999999999999999876543211    1111 111222223 377899999999999999988


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|+.+.+|||..+
T Consensus       234 ~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        234 ASWITGVTLVVDGGRCV  250 (251)
T ss_pred             ccCCCCCeEEECCCccC
Confidence            88999999999999753

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-38  Score=274.60  Aligned_cols=244  Identities=32%  Similarity=0.430  Sum_probs=209.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..++++|+++||||+++||++++++|+++|++|++++|+.+.+++...++   +.+++++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            34588999999999999999999999999999999999998877766554   456889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--------CceEEEEecccccccCC
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--------SGCILCTASVTGLLGGL  177 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~g~iv~vss~~~~~~~~  177 (297)
                      ++++|++|||+|..  ....+.+.+.++|+.++++|+.+++.+++++.|.+.++.        .+++|++||..+..+.+
T Consensus        84 ~~~~d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         84 AGTIDILVNNSGVS--TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            99999999999986  445566778899999999999999999999999886543        47999999999888888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ...+|+.+|++++.+++.++.++.++||+|++|+||+++|++......       .+. ........+ .++...|+|++
T Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~-~~~~~~~~~-~~~~~~p~~~~  232 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-------TEQ-GQKLVSMLP-RKRVGKPEDLD  232 (258)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-------hHH-HHHHHhcCC-CCCCcCHHHHH
Confidence            888999999999999999999999999999999999999998653321       111 111222223 37899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +.+.||+++.+.+++|+.|.+|||+.
T Consensus       233 ~~~~~l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        233 GLLLLLAADESQFINGAIISADDGFG  258 (258)
T ss_pred             HHHHHHhChhhcCCCCcEEEeCCCCC
Confidence            99999999999999999999999973

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-38  Score=273.27  Aligned_cols=250  Identities=30%  Similarity=0.450  Sum_probs=213.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+   +.+++++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999988777665554   45688899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|++|||||..  ....+.+.+.+++++++++|+.+++.+.+++.+.|.+ .+.+++|++||..+..+.+++..|+++|
T Consensus        87 ~id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         87 RLDIVVNNVGGT--MPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            999999999976  3455778899999999999999999999999999976 4578999999999998989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+ +|+|++|+||++.|++.....       .............+. ++..+|+|+|+.++|++++
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  235 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA-------ANDELRAPMEKATPL-RRLGDPEDIAAAAVYLASP  235 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc-------CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            9999999999999987 699999999999998764211       111222222233333 6678999999999999998


Q ss_pred             CCCcccccEEEecCCcccccCCCCCC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKNLKLPA  292 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~~~~~~  292 (297)
                      ...+++|+.+.+|||... .+.-||.
T Consensus       236 ~~~~~~g~~~~~~~~~~~-~~~~~~~  260 (263)
T PRK07814        236 AGSYLTGKTLEVDGGLTF-PNLDLPI  260 (263)
T ss_pred             cccCcCCCEEEECCCccC-CCCCCCC
Confidence            888999999999999877 6665554

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-38  Score=274.67  Aligned_cols=245  Identities=25%  Similarity=0.331  Sum_probs=207.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +|++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++   +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999987766554443   346788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ....+.+.+.++|++.+++|+.+++.++++++|.+.++ .|++|++||..+..+.+.+..|+++
T Consensus        84 ~~~iD~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         84 FGPIDVLVSGAAGN--FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             cCCCCEEEECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            99999999999975  34557788899999999999999999999999998654 4899999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.|+++++.++.++||+|+.|+||+++ |+......       .............+. ++..+|+|+|+.+.+|+
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  232 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-------PSPELQAAVAQSVPL-KRNGTKQDIANAALFLA  232 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-------cCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999997 54332211       111111222222333 77899999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+.+.+|||+.+
T Consensus       233 ~~~~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        233 SDMASYITGVVLPVDGGWSL  252 (264)
T ss_pred             ChhhcCccCCEEEECCCccc
Confidence            98888999999999999864

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.6e-38  Score=270.75  Aligned_cols=241  Identities=24%  Similarity=0.364  Sum_probs=204.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++|+++||||++|||++++++|+++|++|++.. ++.+..++..+++   +.++..+.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999988754 4444444433332   45678889999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ....+.+.+.++|++++++|+.+++.+++++.|.+.+++.+++|++||..+..+.+.+..|+.+|+
T Consensus        81 ~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGIT--RDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            999999999986  344577889999999999999999999999999998777789999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||++++|+||+++|++.....        ++ ..+......+. +++.+|+|+++.++||+++.
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~--------~~-~~~~~~~~~~~-~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--------PD-VLEKIVATIPV-RRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC--------hH-HHHHHHhcCCc-cCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999865321        11 11122222333 67889999999999999998


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|+.+.+|||..+
T Consensus       229 ~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        229 SGFSTGADFSLNGGLHM  245 (246)
T ss_pred             cCCccCcEEEECCcccC
Confidence            89999999999999653

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-38  Score=270.43  Aligned_cols=244  Identities=32%  Similarity=0.429  Sum_probs=211.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||+++||+++++.|+++|++|++++|+.++++...+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988777665544   4568899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|..  ....+.+.+.+++++.+++|+.+++.+++++.|.+.+++.+++|++||..+..+.+....|+.+|
T Consensus        83 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         83 GGLDGLVNNAGIT--NSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            9999999999987  44557788899999999999999999999999999877788999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.+|+++.|+||+++|++......        ........... +.+++.+|+|+|+++++++++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~  231 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--------DERHAYYLKGR-ALERLQVPDDVAGAVLFLLSD  231 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--------hHHHHHHHhcC-CCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999899999999999999998754211        01111112222 337789999999999999998


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ..++++|+.|.+|||+.+
T Consensus       232 ~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        232 AARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cccCccCcEEEECCCccc
Confidence            888999999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-38  Score=300.21  Aligned_cols=248  Identities=35%  Similarity=0.541  Sum_probs=214.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            56899999999999999999999999999999999999988888887777788899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc-eEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      +||||||........+.+.+.++|++++++|+.+++.++++++|+|.+++.| ++|++||..+..+.+.+..|+++|+++
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal  161 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV  161 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence            9999999853233456788999999999999999999999999999766555 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|+++++.|+.+.||+|++|+||+++|++.......      ............+. +++.+|+|+|+.+.+|+++...
T Consensus       162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~va~~v~~l~~~~~~  234 (520)
T PRK06484        162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERA------GKLDPSAVRSRIPL-GRLGRPEEIAEAVFFLASDQAS  234 (520)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhccc------chhhhHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999986543211      00001111112223 6778999999999999999889


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      +++|+++.+|||+...
T Consensus       235 ~~~G~~~~~~gg~~~~  250 (520)
T PRK06484        235 YITGSTLVVDGGWTVY  250 (520)
T ss_pred             CccCceEEecCCeecc
Confidence            9999999999998654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=7.4e-38  Score=269.93  Aligned_cols=243  Identities=28%  Similarity=0.420  Sum_probs=210.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||+++||++++++|+++|+.|++.+|+.+++++.....+.++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999999999888877766666678889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||..  ...++.+.+.++|++++++|+.+++.+++++.+.+.+++.+++|++||..+..+.+....|+.+|+++
T Consensus        82 d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~  159 (245)
T PRK12936         82 DILVNNAGIT--KDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGM  159 (245)
T ss_pred             CEEEECCCCC--CCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHH
Confidence            9999999986  44556778889999999999999999999999988766678999999999998888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.++.+.|+++++|+||+++|++......         ...+......+. +++.+|+|+++++.+|+++...
T Consensus       160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~~~~~~  229 (245)
T PRK12936        160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND---------KQKEAIMGAIPM-KRMGTGAEVASAVAYLASSEAA  229 (245)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh---------HHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999899999999999999987643211         111111222333 6788999999999999988878


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      +++|+++.+|||+..
T Consensus       230 ~~~G~~~~~~~g~~~  244 (245)
T PRK12936        230 YVTGQTIHVNGGMAM  244 (245)
T ss_pred             CcCCCEEEECCCccc
Confidence            999999999999754

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-38  Score=270.59  Aligned_cols=249  Identities=35%  Similarity=0.536  Sum_probs=214.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++  +.++.++++|++|+++++++++++.++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5688999999999999999999999999999999999988777666554  45688999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||+|..  ....+.+.+.+++++.+++|+.+++.+.+.+++.+++.+.++++++||..+..+.+....|+.+|+
T Consensus        81 ~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         81 RLDVLVNNAGFG--CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             CCCEEEECCCCC--CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence            999999999986  445567788999999999999999999999999998777789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++..+||++++++||+++|++..+.+...   ...+..........+. +++.+++|+|+.++++++..
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~  234 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH---ADPEALREALRARHPM-NRFGTAEEVAQAALFLASDE  234 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccc---cChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCch
Confidence            9999999999999989999999999999999876543221   1122222222222233 56889999999999999998


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|+.+.+|||+..
T Consensus       235 ~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        235 SSFATGTTLVVDGGWLA  251 (252)
T ss_pred             hcCccCCEEEECCCeec
Confidence            89999999999999753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.3e-37  Score=269.38  Aligned_cols=247  Identities=28%  Similarity=0.464  Sum_probs=212.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|+++.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999988766655443   456889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++|||+|..  ....+.+.+.+++++.+++|+.+++.+.+++.+.|.+.+.+++|++||..+..+.+....|+.+|++
T Consensus        81 ~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWD--KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            99999999976  4455777889999999999999999999999999987777899999999998888889999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.++++++.++.+.||+++.++||+++|++........   ..............+ .+++.+|+|+|+++.+++++..
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~  234 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLREAFTRAIP-LGRLGQPDDLPGAILFFSSDDA  234 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHHHHHHhcCC-ccCCcCHHHHHHHHHHHcCccc
Confidence            999999999999888999999999999999876543211   112222222223333 3778999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+++.+|||.++
T Consensus       235 ~~~~g~~~~~~~g~~~  250 (250)
T TIGR03206       235 SFITGQVLSVSGGLTM  250 (250)
T ss_pred             CCCcCcEEEeCCCccC
Confidence            9999999999999763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=270.11  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=212.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||+++||++++++|+++|++|++++|+++..++..+.+   +.++.++++|+++.+++.++++.+.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            477999999999999999999999999999999999997776665544   45688899999999999999999998899


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhc-cCCCCceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM-IPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|++|||||..  ......+.+.+++++.+++|+.+++.+++.+++.+ ++.+.+++|++||..+..+.+....|+.+|
T Consensus        84 ~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         84 SVDILVSNAGIQ--IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             CCCEEEECCccC--CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            999999999986  44556678899999999999999999999999999 666678999999998888888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.+++.++.++.+.||++++|+||+++|++....+......  ...+.............+++++|+|+++++++++
T Consensus       162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999988999999999999999876544332211  1112212212222223378999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.....++|+++++|||+.+
T Consensus       242 ~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        242 SFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             CccccCCcCCEEeeCCceec
Confidence            98778899999999999753

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.8e-37  Score=269.25  Aligned_cols=247  Identities=35%  Similarity=0.532  Sum_probs=208.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |+++||||+++||.+++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++.+.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999987766655544   456889999999999999999999999999999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +|||+|..  ...++.+.+.++|++.+++|+.+++.+++.+++.|++++ .+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVA--PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcC--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            99999986  455677889999999999999999999999999997754 489999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .+++.++.++.+.||+|++|+||+++|+++.........  ...............+. +++.+|+|+++++.+|+++..
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCC-CCCCCHHHHHHHHHhhccccc
Confidence            999999999999999999999999999987544321110  01111111112222333 778999999999999999998


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+.+.+|||+.+
T Consensus       238 ~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       238 DYITGQSILVDGGMVY  253 (254)
T ss_pred             CCccCcEEEecCCccC
Confidence            9999999999999643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=270.95  Aligned_cols=244  Identities=33%  Similarity=0.565  Sum_probs=206.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .++||+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.  ..++++|++++++++++++++.+.++++|
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999999887776666553  26789999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~a~  189 (297)
                      ++|||||........+.+.+.+.|++.+++|+.+++.+++.++|.+++++.+++|++||..+..+.+ ++..|+.+|+++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal  161 (255)
T PRK06057         82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGV  161 (255)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHH
Confidence            9999999763223456678899999999999999999999999999877778999999988777653 677899999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.++.++||+|++|+||+++|++.......     ..+..... ....+ .+++.+|+|+|+++++|+++...
T Consensus       162 ~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~~~~~~~-~~~~~-~~~~~~~~~~a~~~~~l~~~~~~  234 (255)
T PRK06057        162 LAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-----DPERAARR-LVHVP-MGRFAEPEEIAAAVAFLASDDAS  234 (255)
T ss_pred             HHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-----CHHHHHHH-HhcCC-CCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999987543211     11111111 11223 36789999999999999999999


Q ss_pred             cccccEEEecCCcc
Q 022418          270 YVSGHNLVVDGGFT  283 (297)
Q Consensus       270 ~~tG~~i~vdgG~~  283 (297)
                      +++|+.+.+|||..
T Consensus       235 ~~~g~~~~~~~g~~  248 (255)
T PRK06057        235 FITASTFLVDGGIS  248 (255)
T ss_pred             CccCcEEEECCCee
Confidence            99999999999965

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=275.08  Aligned_cols=244  Identities=32%  Similarity=0.486  Sum_probs=207.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++++|++|||||++|||.+++++|+++|++|++++|+.+ ..+...+.+   +.++.++.+|+++.+++.++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999864 333333332   45688999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||... ....+.+.+.++|.+.+++|+.+++.+++++.+.|.+  .+++|++||..+..+.+.+..|++
T Consensus       121 ~~~~iD~lI~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 ELGRLDILVNNAAFQY-PQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             HcCCCCEEEECCcccC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            9999999999999753 2345778899999999999999999999999998853  479999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.++++++.++.++||+|++|+||+++|++.....       ..+....+ ....+ .+++.+|+|+|+++++|+
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-------~~~~~~~~-~~~~~-~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-------DEEKVSQF-GSNTP-MQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-------CHHHHHHH-HhcCC-cCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999765321       11222222 22223 377899999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+.|.+|||+..
T Consensus       269 ~~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             CcccCCccCcEEEeCCCccc
Confidence            99989999999999999754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=267.14  Aligned_cols=232  Identities=28%  Similarity=0.427  Sum_probs=193.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++|+++||||++|||++++++|+++|++|+++++ +.+..++...+.  .+.++.+|++|++++.++++    +++++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~----~~~~i   76 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVR----KSGAL   76 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHH----HhCCC
Confidence            478999999999999999999999999999988876 445555554544  35678899999998877765    35789


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK~a  188 (297)
                      |++|||||..  ......+.+.++|++++++|+.+++.+++.+.+.+.+  .+++|++||..+. .+.+++..|+.+|++
T Consensus        77 d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         77 DILVVNAGIA--VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSA  152 (237)
T ss_pred             cEEEECCCCC--CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHH
Confidence            9999999976  3445667889999999999999999999999999853  4899999998874 567788899999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.+++.++.++.++||+||+|+||+++|++.....         + ..+......+. +++.+|+|+|+.+.||+++..
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---------~-~~~~~~~~~~~-~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---------P-MKDMMHSFMAI-KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---------H-HHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999754211         1 11112222333 788999999999999999999


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                      .++||+++.+|||+.
T Consensus       222 ~~~~G~~~~~dgg~~  236 (237)
T PRK12742        222 SFVTGAMHTIDGAFG  236 (237)
T ss_pred             CcccCCEEEeCCCcC
Confidence            999999999999974

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=269.29  Aligned_cols=251  Identities=35%  Similarity=0.515  Sum_probs=214.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++|+++||||+++||++++++|+++|++|++++|+.+.+++...++   +.+++++.+|+++++++.++++.+.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777666554   567889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++|||||..  ......+.+.+++++++++|+.+++.+++.+++.+++++.+++|++||..+..+.+++..|+.+|++
T Consensus        82 ~d~vi~~a~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQ--HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            99999999976  4556777889999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++.+++.++.++.+.||++++++||+++|++...........  ...............+.+++++++|+|+++.+|+++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  239 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF  239 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999876544332211  111111111222222337899999999999999998


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ....++|+.+.+|||++.
T Consensus       240 ~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        240 AAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             cccCccCCeEEeCCCEec
Confidence            878899999999999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=269.33  Aligned_cols=243  Identities=35%  Similarity=0.503  Sum_probs=207.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||+++||.+++++|+++|++|++++|+.+.++...+.+   +.++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999988776665544   4568889999999999999999999998


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh-ccCCCCceEEEEecccccccCCC----Ccc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV-MIPRRSGCILCTASVTGLLGGLA----QHT  181 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~g~iv~vss~~~~~~~~~----~~~  181 (297)
                      +++|++|||||..  ......+.+.+.|++++++|+.+++.+++++.+. +.+++.+++|++||..+..+.++    ...
T Consensus        88 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGAT--WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcch
Confidence            9999999999976  3445667889999999999999999999999998 76666789999999877765543    478


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.+|++++.+++.++.++.++||++++++||+++|++.....+.        . ........+. +++++|+|+|+.+.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~--------~-~~~~~~~~~~-~~~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER--------L-GEDLLAHTPL-GRLGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH--------H-HHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999876543211        1 1112223333 67889999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +|+++...+++|+.+.+|||.++
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        236 LLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HHhCccccCccCCEEEECCCeec
Confidence            99999999999999999999864

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.4e-38  Score=278.57  Aligned_cols=243  Identities=28%  Similarity=0.434  Sum_probs=203.5

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ++...+++||+++||||++|||++++++|+++|++|++.+++. +..++..+++   +.++.++.+|++|+++++++++.
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4455789999999999999999999999999999999998854 3444444433   56788999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-------CCceEEEEecccccc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-------RSGCILCTASVTGLL  174 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~g~iv~vss~~~~~  174 (297)
                      +.+ ++++|++|||||..  ....+.+.+.++|++.+++|+.+++.+++++.++|+++       ..|++|++||..+..
T Consensus        84 ~~~-~g~iD~li~nAG~~--~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGIT--RDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHH-hCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            988 99999999999987  44557788999999999999999999999999988643       247999999999988


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      +.+.+..|+++|++++.|++.++.|+.++||+||+|+||. .|++.......     ..+.    ....    ....+|+
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~-----~~~~----~~~~----~~~~~pe  226 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGD-----APDV----EAGG----IDPLSPE  226 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccc-----cchh----hhhc----cCCCCHH
Confidence            8888889999999999999999999999999999999994 88875432211     0000    0000    2345899


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      |+|+.+.||+++.+.++||+++.+|||....
T Consensus       227 ~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        227 HVVPLVQFLASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HHHHHHHHHcCccccCCCCCEEEEcCCeEEE
Confidence            9999999999998889999999999998664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-37  Score=268.78  Aligned_cols=239  Identities=25%  Similarity=0.349  Sum_probs=202.9

Q ss_pred             cCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCC-----------chhHHHHHH---HhCCCeeEEEecCCCHH
Q 022418           30 RKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQ-----------HQLGQQTAK---ELGPNATFIACDVTKES   93 (297)
Q Consensus        30 ~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~-----------~~~~~~~~~---~~~~~v~~~~~D~s~~~   93 (297)
                      +++++|+++||||++  |||.+++++|+++|++|++++|+           ........+   ..+.+++++.+|+++++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            467899999999995  99999999999999999999987           111111222   22457899999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      ++.++++++.++++++|++|||||..  ....+.+.+.+++++.+++|+.+++.+.+++.+.|.++..+++|++||..+.
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  158 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYS--THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSL  158 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcccc
Confidence            99999999999999999999999986  4455777889999999999999999999999999877677899999999888


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCH
Q 022418          174 LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       174 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                      .+.+.+..|+.+|++++.+++.++.++...||+|++|+||+++|++..+....            ...... +.+++.+|
T Consensus       159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~------------~~~~~~-~~~~~~~~  225 (256)
T PRK12748        159 GPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKH------------HLVPKF-PQGRVGEP  225 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHH------------hhhccC-CCCCCcCH
Confidence            88888889999999999999999999999999999999999999875432211            111111 22667899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          254 NDIANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       254 ~dia~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +|+|+.+.+|+++...+++|+++.+|||+.
T Consensus       226 ~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        226 VDAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHHHHHhCcccccccCCEEEecCCcc
Confidence            999999999999988899999999999974

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.6e-38  Score=267.94  Aligned_cols=234  Identities=29%  Similarity=0.476  Sum_probs=195.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+....      ...++.++.+|++++      ++++.+.++++
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~------~~~~~~~~~~i   68 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSDD------LEPLFDWVPSV   68 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHHH------HHHHHHhhCCC
Confidence            468899999999999999999999999999999999986431      134678899999987      44444456899


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||... ....+.+.+.++|++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.+.+..|+.+|+++
T Consensus        69 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  147 (235)
T PRK06550         69 DILCNTAGILD-DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHAL  147 (235)
T ss_pred             CEEEECCCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHH
Confidence            99999999753 22456778899999999999999999999999999877789999999999998888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.++.++||+|++|+||+++|++....+.       .+..........+. +++.+|+|+|+++++|+++.+.
T Consensus       148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~s~~~~  219 (235)
T PRK06550        148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-------PGGLADWVARETPI-KRWAEPEEVAELTLFLASGKAD  219 (235)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-------chHHHHHHhccCCc-CCCCCHHHHHHHHHHHcChhhc
Confidence            999999999999999999999999999997643221       11111112222333 7789999999999999999889


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      +++|+++.+|||+.+
T Consensus       220 ~~~g~~~~~~gg~~~  234 (235)
T PRK06550        220 YMQGTIVPIDGGWTL  234 (235)
T ss_pred             cCCCcEEEECCceec
Confidence            999999999999753

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=272.76  Aligned_cols=239  Identities=26%  Similarity=0.292  Sum_probs=202.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHH---hCCCeeEEEecCCCHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-------GQQTAKE---LGPNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-------~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~   99 (297)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.       +++..++   .+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            56889999999999999999999999999999999998652       2333222   2457889999999999999999


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC--C
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--L  177 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~--~  177 (297)
                      +++.+.++++|++|||||..  ...++.+.+.++|++++++|+.+++.+++++.|.|.+++.++++++||..+..+.  +
T Consensus        82 ~~~~~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAI--NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCc--CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            99999999999999999976  4455778899999999999999999999999999988777899999998877766  7


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-CccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF-AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI  256 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  256 (297)
                      ++.+|++||++++.+++.++.|+.++||+||+|+|| +++|++.+.....                .. ..++..+|+++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~----------------~~-~~~~~~~p~~v  222 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG----------------DE-AMRRSRTPEIM  222 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc----------------cc-cccccCCHHHH
Confidence            788999999999999999999999999999999999 6888765432110                00 12567899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      |+.+++++++...++||+.+ +|++.....+.
T Consensus       223 a~~~~~l~~~~~~~~~G~~~-~~~~~~~~~~~  253 (273)
T PRK08278        223 ADAAYEILSRPAREFTGNFL-IDEEVLREAGV  253 (273)
T ss_pred             HHHHHHHhcCccccceeEEE-eccchhhccCc
Confidence            99999999998889999988 67777655443

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.6e-38  Score=266.79  Aligned_cols=219  Identities=26%  Similarity=0.388  Sum_probs=195.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..-|.+|++||||||++|||+++|.+|+++|+++++.|.|.+..++..++..  .+++.+.||+||.+++.+..++++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            4468999999999999999999999999999999999999999888887763  37999999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +|.+|++|||||+.  +..++.+.+.+++++++++|+.+.++.+++|+|.|.+++.|++|.++|.+|..+.++...||+|
T Consensus       112 ~G~V~ILVNNAGI~--~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  112 VGDVDILVNNAGIV--TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             cCCceEEEeccccc--cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence            99999999999998  6677889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcc---CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCE---YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       186 K~a~~~~~~~la~el~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      |+|+.+|.+++..|+..   +||++..|+|++++|+|....  ...                +..-..++|+.+|+.++.
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~--~~~----------------~~l~P~L~p~~va~~Iv~  251 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA--TPF----------------PTLAPLLEPEYVAKRIVE  251 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC--CCC----------------ccccCCCCHHHHHHHHHH
Confidence            99999999999999764   479999999999999988641  100                011456788888888887


Q ss_pred             HhcC
Q 022418          263 LASD  266 (297)
Q Consensus       263 l~~~  266 (297)
                      ....
T Consensus       252 ai~~  255 (300)
T KOG1201|consen  252 AILT  255 (300)
T ss_pred             HHHc
Confidence            6643

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-37  Score=264.37  Aligned_cols=240  Identities=30%  Similarity=0.455  Sum_probs=203.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++++|+++||||+++||++++++|+++|++|+++.|+.+ ..++..++   .+.++.++.+|++++++++++++++.++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988877653 33333333   3567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ...++.+.+.++|++++++|+.+++.++++++|.+.+  .+++|++||..+..+.+.+..|+.+
T Consensus        81 ~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (245)
T PRK12937         81 FGRIDVLVNNAGVM--PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAAS  156 (245)
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHH
Confidence            99999999999986  3455677889999999999999999999999999854  4799999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+.||+++.++||+++|++.....       ..+. ........+. ++..+|+|+++.+.++++
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-------~~~~-~~~~~~~~~~-~~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-------SAEQ-IDQLAGLAPL-ERLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-------CHHH-HHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999853211       1111 1222222333 778899999999999999


Q ss_pred             CCCCcccccEEEecCCc
Q 022418          266 DDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~  282 (297)
                      +...+++|+.+++|||+
T Consensus       228 ~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        228 PDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             ccccCccccEEEeCCCC
Confidence            88889999999999996

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=274.56  Aligned_cols=236  Identities=22%  Similarity=0.318  Sum_probs=202.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++||+++||||++|||+++++.|+++|++|++++|+.+.+++..++++  .++..+.+|++|+++++++++++.++++
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999999998888777764  4566778999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|.++ .|++|++||..+..+.+.+..|++||+
T Consensus        85 ~id~vI~nAG~~--~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (296)
T PRK05872         85 GIDVVVANAGIA--SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKA  161 (296)
T ss_pred             CCCEEEECCCcC--CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHH
Confidence            999999999987  45668889999999999999999999999999998764 489999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|+++++.|+.++||+|++++||+++|++.......      .+...........+.++.++|+|+|+.+.+++++.
T Consensus       162 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        162 GVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD------LPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc------chhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999987643211      01111111111123367889999999999999988


Q ss_pred             CCccccc
Q 022418          268 AKYVSGH  274 (297)
Q Consensus       268 ~~~~tG~  274 (297)
                      ..+++|.
T Consensus       236 ~~~i~~~  242 (296)
T PRK05872        236 ARRVYAP  242 (296)
T ss_pred             CCEEEch
Confidence            7777765

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.7e-37  Score=265.48  Aligned_cols=241  Identities=32%  Similarity=0.459  Sum_probs=204.1

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHhC-----CCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKELG-----PNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~-~~~~~~~~~~~~-----~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+.+.     ..+..+++|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666665554441     2345688999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||..  ....+.+.+.+++++++++|+.+++.+++.++|.+++++.+++|++||..+..+.+.+..|+++|++++
T Consensus        82 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVG--SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            999999987  455677889999999999999999999999999998877889999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCC--cEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCEYG--IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .++++++.|+.+++  |+|++|+||+++|++........    ..+..........+. +++.+|+|+|+++++|+++..
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~  234 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL----GEEEATRKLARGVPL-GRLGEPDDVAHAVLYLASDES  234 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc----cchhHHHHHhccCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            99999999998765  99999999999999876543211    111111222222333 678899999999999999988


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+.+.+|||.+.
T Consensus       235 ~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        235 RFVTGAELVIDGGICA  250 (251)
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.7e-37  Score=266.84  Aligned_cols=238  Identities=24%  Similarity=0.367  Sum_probs=199.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++     +..+.++.+|++|++++.++++++.+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988877666554     2245677999999999999999999999


Q ss_pred             CCccEEEECccCCCC-CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC--------
Q 022418          107 NQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL--------  177 (297)
Q Consensus       107 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~--------  177 (297)
                      +++|++|||||.... ....+.+.+++++++.+++|+.+++.++++++|.|++++.+++|++||..+..+..        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986421 13457788999999999999999999999999999877778999999987654311        


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 022418          178 --AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND  255 (297)
Q Consensus       178 --~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  255 (297)
                        ....|+++|++++.+++.++.++.+.||+|+.|+||.++++.......             ...... +.+++++|+|
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~~d  227 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLN-------------AYKKCC-NGKGMLDPDD  227 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHH-------------HHHhcC-CccCCCCHHH
Confidence              123699999999999999999999999999999999998864322111             111111 2267889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +|+++++++++...+++|+.+.+|||+.
T Consensus       228 va~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        228 ICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             hhhhHhheeccccccccCceEEecCCcc
Confidence            9999999999888999999999999975

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=6e-37  Score=263.63  Aligned_cols=233  Identities=30%  Similarity=0.456  Sum_probs=198.5

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++||||++|||++++++|+++|++|++++|+. +.+++..+++   +.++.++.+|++|++++.+++++..+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999988754 4444444433   5678999999999999999999999899999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHH-HhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST-RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      |||+|..  ....+.+.+.++|+.++++|+.+++.+++.+. |.+++++.+++|++||..+..+.+.+..|+.+|++++.
T Consensus        81 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGIT--RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            9999986  34456678899999999999999999999875 55555567899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      +++.++.++.++||+|+.|+||+++|++.....+         .... .....+. +++.+|+|+|+.+.||+++...++
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~-~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~  227 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH---------DLDE-ALKTVPM-NRMGQPAEVASLAGFLMSDGASYV  227 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhhhH---------HHHH-HHhcCCC-CCCCCHHHHHHHHHHHcCchhcCc
Confidence            9999999999999999999999999998764321         1111 1222334 788999999999999999999999


Q ss_pred             cccEEEecCCc
Q 022418          272 SGHNLVVDGGF  282 (297)
Q Consensus       272 tG~~i~vdgG~  282 (297)
                      +|+.+.+|||+
T Consensus       228 ~g~~~~~~gg~  238 (239)
T TIGR01831       228 TRQVISVNGGM  238 (239)
T ss_pred             cCCEEEecCCc
Confidence            99999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=269.07  Aligned_cols=245  Identities=21%  Similarity=0.319  Sum_probs=192.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH----QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~----~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      +++++|+++||||++|||++++++|+++|++|++++++.    +..++..+++   +.++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            567899999999999999999999999999977765533    2333333332   457888999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .+.++++|++|||||..  ....+.+.+.++|++++++|+.+++.+++++.|.+.+  .+++++++|.....+.+.+..|
T Consensus        84 ~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y  159 (257)
T PRK12744         84 KAAFGRPDIAINTVGKV--LKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAY  159 (257)
T ss_pred             HHhhCCCCEEEECCccc--CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccc
Confidence            99999999999999986  4455778889999999999999999999999999854  3677776433322345677899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCC-CCCCCCHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL-EGTHCEPNDIANAAL  261 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dia~~~~  261 (297)
                      ++||++++.|+++++.|+.++||+|++++||+++|++........     ............+. ..++.+|+|+|+++.
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAE-----AVAYHKTAAALSPFSKTGLTDIEDIVPFIR  234 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccc-----hhhcccccccccccccCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999753311100     00000000001111 136889999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +|+++ ..+++|+++.+|||+.+
T Consensus       235 ~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        235 FLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             Hhhcc-cceeecceEeecCCccC
Confidence            99996 57999999999999764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=4.1e-37  Score=267.66  Aligned_cols=237  Identities=17%  Similarity=0.201  Sum_probs=194.2

Q ss_pred             EEEEEcCCCcHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           36 VALITGAASGIGKATAAKFIS----NGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~----~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++||||++|||++++++|++    +|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998887776654     2357889999999999999999998876


Q ss_pred             CCc----cEEEECccCCCCCCCccCC-CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEecccccccCCCC
Q 022418          107 NQL----DIMYNNAGVACKTPRSIVD-LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLGGLAQ  179 (297)
Q Consensus       107 g~i----d~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~~~~~  179 (297)
                      +++    |++|||||..........+ .+.++|++.+++|+.+++.+++.++|.|++++  .+++|++||..+..+.+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    6999999975322222333 35789999999999999999999999997642  4799999999999888888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      .+|++||++++.|+++++.|+.+.||+||+|+||+++|++.....+...   .. ..........+. +++.+|+|+|+.
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~---~~-~~~~~~~~~~~~-~~~~~p~eva~~  236 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESV---DP-DMRKGLQELKAK-GKLVDPKVSAQK  236 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcC---Ch-hHHHHHHHHHhc-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999998765432211   11 112222233333 788999999999


Q ss_pred             HHHHhcCCCCcccccEEEe
Q 022418          260 ALYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~v  278 (297)
                      +++|+++ .+++||+++.+
T Consensus       237 ~~~l~~~-~~~~~G~~~~~  254 (256)
T TIGR01500       237 LLSLLEK-DKFKSGAHVDY  254 (256)
T ss_pred             HHHHHhc-CCcCCcceeec
Confidence            9999974 58999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=268.74  Aligned_cols=246  Identities=29%  Similarity=0.375  Sum_probs=209.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++++|+++|||++++||++++++|+++|++|++++|+.+..+...+++     +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999987766655544     24678889999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|++|||||... ....+.+.+.++|.+++++|+.+++.+++++.+.+.+.+.++++++||..+..+.++..+|+.
T Consensus        83 ~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         83 WHGRLHGVVHCAGGSE-TIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             HcCCCCEEEECCCccc-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence            9999999999999753 234566788999999999999999999999999998767789999999998888888889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++...+|+++.|+||+++|++......       ............+. +++++|+|+|+++.+|+
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  233 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-------SPELSADYRACTPL-PRVGEVEDVANLAMFLL  233 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-------CHHHHHHHHcCCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999998643211       11111111122233 77889999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+++++|||+..
T Consensus       234 ~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        234 SDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CchhcCcCCCEEEECCCeec
Confidence            98888999999999999876

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=262.06  Aligned_cols=240  Identities=30%  Similarity=0.500  Sum_probs=202.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||++|||.+++++|+++|++|+++.+ +.+..++..+++   +.++.++.+|+++++++.++++++.+++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999987655 444554444433   4568899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||..  ....+.+.+++++++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.+++..|+.+|
T Consensus        83 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         83 GKVDILVNNAGIT--RDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            9999999999987  44456778899999999999999999999999999877778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.||+++.++||+++|++......        ....... ... ..+++.+|+|+++++.+++++
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~-~~~-~~~~~~~~edva~~~~~~~~~  230 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE--------EVRQKIV-AKI-PKKRFGQADEIAKGVVYLCRD  230 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH--------HHHHHHH-HhC-CCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999899999999999999987543211        1111111 112 236789999999999999976


Q ss_pred             CCCcccccEEEecCCcc
Q 022418          267 DAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~  283 (297)
                      . .+++|+++++|||+.
T Consensus       231 ~-~~~~g~~~~i~~g~~  246 (247)
T PRK12935        231 G-AYITGQQLNINGGLY  246 (247)
T ss_pred             c-cCccCCEEEeCCCcc
Confidence            5 589999999999974

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-37  Score=260.86  Aligned_cols=215  Identities=22%  Similarity=0.278  Sum_probs=180.9

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..++.  .+.++++|++++++++++++.+.+   ++|++|||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEEC
Confidence            6899999999999999999999999999999988887776654  366789999999999999887642   69999999


Q ss_pred             ccCCCCC----CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          116 AGVACKT----PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       116 ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||.....    ...+.+ +.++|++++++|+.+++.++++++|.|++  .|++|++||..    .+....|+++|++++.
T Consensus        77 ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~  149 (223)
T PRK05884         77 PAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSN  149 (223)
T ss_pred             CCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHH
Confidence            9853211    112333 57899999999999999999999999964  48999999876    2456789999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      |++.++.|+.++||+||+|+||+++|++....                  ...+    ..+|+|+|+.+.||+++.+.++
T Consensus       150 ~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~------------------~~~p----~~~~~~ia~~~~~l~s~~~~~v  207 (223)
T PRK05884        150 WTAGQAAVFGTRGITINAVACGRSVQPGYDGL------------------SRTP----PPVAAEIARLALFLTTPAARHI  207 (223)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccCchhhhhc------------------cCCC----CCCHHHHHHHHHHHcCchhhcc
Confidence            99999999999999999999999999853210                  0011    1379999999999999999999


Q ss_pred             cccEEEecCCccc
Q 022418          272 SGHNLVVDGGFTS  284 (297)
Q Consensus       272 tG~~i~vdgG~~~  284 (297)
                      ||+++.+|||...
T Consensus       208 ~G~~i~vdgg~~~  220 (223)
T PRK05884        208 TGQTLHVSHGALA  220 (223)
T ss_pred             CCcEEEeCCCeec
Confidence            9999999999864

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-37  Score=260.65  Aligned_cols=220  Identities=19%  Similarity=0.237  Sum_probs=188.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++..+.+|++++++++++++++.+++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999998887776554   5567889999999999999999999999


Q ss_pred             C-CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchh
Q 022418          107 N-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       107 g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      + ++|++|||||... ....+.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|++|++||..+.   +++..|++
T Consensus        81 g~~iD~li~nag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a  156 (227)
T PRK08862         81 NRAPDVLVNNWTSSP-LPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES  156 (227)
T ss_pred             CCCCCEEEECCccCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence            8 9999999998542 344678889999999999999999999999999997654 6899999997654   45678999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|+++++|+++++.|+.++||+||+|+||+++|+...          .+..+.+.             .+|++.++.||+
T Consensus       157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----------~~~~~~~~-------------~~~~~~~~~~l~  213 (227)
T PRK08862        157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----------DAVHWAEI-------------QDELIRNTEYIV  213 (227)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----------CHHHHHHH-------------HHHHHhheeEEE
Confidence            9999999999999999999999999999999998321          11111110             289999999999


Q ss_pred             cCCCCcccccEEEe
Q 022418          265 SDDAKYVSGHNLVV  278 (297)
Q Consensus       265 ~~~~~~~tG~~i~v  278 (297)
                      +  +.|+||+.+..
T Consensus       214 ~--~~~~tg~~~~~  225 (227)
T PRK08862        214 A--NEYFSGRVVEA  225 (227)
T ss_pred             e--cccccceEEee
Confidence            6  67999998864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.6e-36  Score=265.59  Aligned_cols=239  Identities=23%  Similarity=0.277  Sum_probs=190.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHh----CCCeeEEEecCCCHHHH----HHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKEL----GPNATFIACDVTKESDV----SDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~-~~~~~~~~~~~----~~~v~~~~~D~s~~~~i----~~~~~~~~~~  105 (297)
                      ++++||||++|||++++++|+++|++|++++|+ .+.+++..+++    +.++.++.+|++|++++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999988654 45665555444    24567789999999865    5666666677


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCH-----------HHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEe
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNL-----------EVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTA  168 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vs  168 (297)
                      ++++|+||||||...  ..++.+.+.           ++|.+++++|+.+++.+++++.|.++..      ..+++++++
T Consensus        82 ~g~iD~lv~nAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFY--PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCC--CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            899999999999763  222333222           3689999999999999999999998542      246899999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          169 SVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       169 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                      |..+..+.+.+.+|++||++++.|+++++.|+.+.||+|++|+||+++|+....          .+ .........+..+
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----------~~-~~~~~~~~~~~~~  228 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----------FE-VQEDYRRKVPLGQ  228 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----------hh-HHHHHHHhCCCCc
Confidence            999888888889999999999999999999999999999999999998763211          00 0111112223324


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++.+|+|+|+.+++|+++...+++|+.+.+|||+++.+
T Consensus       229 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       229 REASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             CCCCHHHHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence            67899999999999999999999999999999987653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=273.10  Aligned_cols=223  Identities=25%  Similarity=0.332  Sum_probs=194.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            5688999999999999999999999999999999999998887766554   5678889999999999999999999988


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||..  ..+.+.+.+.+++++.+++|+.+++.+++.++|+|++++.|++|+++|..+..+.+.+..|++||
T Consensus        83 g~iD~lVnnAG~~--~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         83 GRIDVWVNNVGVG--AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             CCCCEEEECCCcC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHH
Confidence            9999999999987  55668889999999999999999999999999999887789999999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHccC-CcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          187 SAIIGLVKSMAAELCEY-GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      ++++.|+++++.|+.+. ||+|+.|+||+++|++.......     .        .....+.....+|+++|+++++++.
T Consensus       161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~--------~~~~~~~~~~~~pe~vA~~il~~~~  227 (330)
T PRK06139        161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----T--------GRRLTPPPPVYDPRRVAKAVVRLAD  227 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----c--------cccccCCCCCCCHHHHHHHHHHHHh
Confidence            99999999999999875 89999999999999976432110     0        0001112446799999999999986


Q ss_pred             CC
Q 022418          266 DD  267 (297)
Q Consensus       266 ~~  267 (297)
                      .+
T Consensus       228 ~~  229 (330)
T PRK06139        228 RP  229 (330)
T ss_pred             CC
Confidence            54

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-36  Score=260.31  Aligned_cols=242  Identities=29%  Similarity=0.393  Sum_probs=202.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .|+++||||+++||.+++++|+++|++|++++|+.. ..++..+.+   +.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            489999999999999999999999999999998753 333333332   4578899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC------CceEEEEecccccccCCCCccch
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR------SGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      |++|||||.......++.+.+.++|++.+++|+.+++.+++++.+.|.++.      .+++|++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999998643345677888999999999999999999999999987543      35799999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|++++.+++.++.++.++||++++|+||+++|++.......         ..........+.+++.+|+|+++++.++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~d~a~~i~~l  232 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK---------YDALIAKGLVPMPRWGEPEDVARAVAAL  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh---------HHhhhhhcCCCcCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999876533211         1111111122236788999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...+.+|+.+++|||+..
T Consensus       233 ~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        233 ASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             hCCcccccCCCEEEECCCeec
Confidence            998888999999999999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-36  Score=258.87  Aligned_cols=239  Identities=28%  Similarity=0.398  Sum_probs=196.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +|+++||||+++||.+++++|+++|++|+++++ +.+..++..+.+   +.++.++.+|++|.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999988874 444444443333   4567889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCC-Cccchhh
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLA-QHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~-~~~Y~~s  185 (297)
                      |++|||||... ....+.+.++++|++++++|+.+++.+++++++.+.++.   .+++|++||..+..+.+. +..|+++
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILE-AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            99999999863 223466788999999999999999999999999986432   478999999988887765 3579999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.++++++.++.++||+|++|+||.++|++.....       .+... .......+. ++..+|+|+++++.++++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-------~~~~~-~~~~~~~p~-~~~~~~~d~a~~~~~l~~  231 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-------EPGRV-DRVKAGIPM-GRGGTAEEVARAILWLLS  231 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-------CHHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999753211       11111 112222233 677899999999999999


Q ss_pred             CCCCcccccEEEecCCc
Q 022418          266 DDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~  282 (297)
                      +...+++|+.+++|||.
T Consensus       232 ~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        232 DEASYTTGTFIDVSGGR  248 (248)
T ss_pred             ccccCccCCEEeecCCC
Confidence            88889999999999984

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-36  Score=259.14  Aligned_cols=244  Identities=28%  Similarity=0.435  Sum_probs=203.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+..+...+++   +.+++++.+|++++++++++++++.+++
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999987666555543   3467889999999999999999999999


Q ss_pred             CCccEEEECccCCCC-CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +++|+||||||.... ....+.+.+++++++.+++|+.+++.++++++|.+.+.+.+++|++||..+..   +...|+.|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence            999999999998632 23456678899999999999999999999999999776778999999987754   34689999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++++++++.+.||++++++||+++|++.....        ............+. .++.+|+|+|+++++++.
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~  229 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--------PKEFVADMVKGIPL-SRMGTPEDLVGMCLFLLS  229 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999989999999999999999765321        11111112222222 567899999999999998


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +...+.+|+.+++|+|.++.
T Consensus       230 ~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        230 DEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             hhhhCcCCCEEEECCCeecc
Confidence            87667899999999998763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=259.34  Aligned_cols=239  Identities=31%  Similarity=0.409  Sum_probs=197.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .|+++||||++|||.++++.|+++|++|+++. |+.+.+++..+++   +.++.++.||++++++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999998765 5555555544433   4578899999999999999999999889999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCC-Cccchhh
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLA-QHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~-~~~Y~~s  185 (297)
                      |++|||||... ....+.+.+.++++.++++|+.+++.+++.+++.+..++   .+++|++||..+..+.+. +..|+.+
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            99999999863 233567788999999999999999999999999886543   578999999988877654 4689999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.++||+|+.|+||+++|++.....       ..+.. .......+ .++..+|+|+|+.++++++
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-------~~~~~-~~~~~~~~-~~~~~~~e~va~~~~~l~~  231 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-------QPGRA-ARLGAQTP-LGRAGEADEVAETIVWLLS  231 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-------CHHHH-HHHhhcCC-CCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999754210       11111 11112223 3677899999999999999


Q ss_pred             CCCCcccccEEEecCCc
Q 022418          266 DDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~  282 (297)
                      +...+++|+.|.+|||.
T Consensus       232 ~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        232 DAASYVTGALLDVGGGR  248 (248)
T ss_pred             ccccCcCCceEeeCCCC
Confidence            99899999999999983

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.7e-36  Score=258.71  Aligned_cols=238  Identities=28%  Similarity=0.458  Sum_probs=202.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+++||++++++|+++|++|++++|+.+ ..++.....   +.++.++.+|+++++++.++++.+.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999854 222222222   34688999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||+|..  ....+.+.+.++|++.+++|+.+++.+++++++.+++++.+++|++||..+..+.+.+..|+.+|++++
T Consensus        83 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         83 ILVNNAGIT--RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             EEEECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            999999986  445577889999999999999999999999999998777889999999999888888899999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .+++.++.++.+.||+++.++||+++|++.....        . ..........+ .+.+.+++|+++.+.+|+++...+
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--------~-~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~~~~~  230 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQMG--------P-EVLQSIVNQIP-MKRLGTPEEIAAAVAFLVSEAAGF  230 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--------H-HHHHHHHhcCC-CCCCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999998764321        1 11111122222 377889999999999999888889


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      ++|+.+.+|||+.+
T Consensus       231 ~~G~~~~~~~g~~~  244 (245)
T PRK12824        231 ITGETISINGGLYM  244 (245)
T ss_pred             ccCcEEEECCCeec
Confidence            99999999999854

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=266.74  Aligned_cols=235  Identities=24%  Similarity=0.377  Sum_probs=194.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++++.+++
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988877766554   4468889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +++|++|||||..  ..+.+.+.+.++|++++++|+.+++.++++++|.|.+++ .|++|++||..+..+.++...|+++
T Consensus        82 g~id~li~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         82 GHVDVVFSNAGIV--VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             CCCCEEEECCCcC--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            9999999999986  456688899999999999999999999999999997655 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+++++|++.++.|+.++||+|++|+||+++|++................ ........+..+.+++|+|+|+.++..+.
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSS-TTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccc-cccccccccccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999986543211000000000 00001111122457899999999998875


Q ss_pred             CC
Q 022418          266 DD  267 (297)
Q Consensus       266 ~~  267 (297)
                      .+
T Consensus       239 ~~  240 (275)
T PRK05876        239 AN  240 (275)
T ss_pred             cC
Confidence            44

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-36  Score=262.06  Aligned_cols=222  Identities=16%  Similarity=0.199  Sum_probs=190.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||++|||++++++|+ +|++|++++|+.+++++..+++   + ..+.++.+|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            689999999999999999999 5999999999998888776655   2 2478899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      ++|||||...  .....+.+.+++++.+++|+.+++.+++.++|.|.+++ .|++|++||..+..+.+.+..|+++|+++
T Consensus        80 ~lv~nag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILG--DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCC--CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            9999999863  33355667788899999999999999999999997654 68999999999998888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      ++|+++++.|+.++||+||+++||+++|++.....                     +.....+|||+|+.++++++....
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---------------------~~~~~~~pe~~a~~~~~~~~~~~~  216 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---------------------PAPMSVYPRDVAAAVVSAITSSKR  216 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---------------------CCCCCCCHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999998753210                     001235899999999999987532


Q ss_pred             cccccEEEecCCcc
Q 022418          270 YVSGHNLVVDGGFT  283 (297)
Q Consensus       270 ~~tG~~i~vdgG~~  283 (297)
                         ++.+.++++..
T Consensus       217 ---~~~~~~~~~~~  227 (246)
T PRK05599        217 ---STTLWIPGRLR  227 (246)
T ss_pred             ---CceEEeCccHH
Confidence               56788887753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1e-35  Score=256.13  Aligned_cols=237  Identities=28%  Similarity=0.418  Sum_probs=203.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+++||++++++|+++|++|+++.| +.+..++...+.   +.++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999999999999888 555554444333   45788999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||+|..  ....+.+.+.+++++.+++|+.+++.+++.+++.+++.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGIT--RDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            999999976  445567788999999999999999999999999998777789999999998888888899999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .+++.++.++.+.||+++++.||+++|++.....        .... .......+. +++.+|+|+++.+.+|++++..+
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--------~~~~-~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~  228 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAMR--------EDVL-NSIVAQIPV-GRLGRPEEIAAAVAFLASEEAGY  228 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--------hHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcC
Confidence            9999999999989999999999999999764321        1111 112222333 77889999999999999988889


Q ss_pred             ccccEEEecCCcc
Q 022418          271 VSGHNLVVDGGFT  283 (297)
Q Consensus       271 ~tG~~i~vdgG~~  283 (297)
                      ++|+.+.+|||..
T Consensus       229 ~~G~~~~~~gg~~  241 (242)
T TIGR01829       229 ITGATLSINGGLY  241 (242)
T ss_pred             ccCCEEEecCCcc
Confidence            9999999999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=257.97  Aligned_cols=242  Identities=30%  Similarity=0.464  Sum_probs=203.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||+||||++++++|+++|++|++. .|+.+.+++..+.+   +.++.++.+|++|++++.++++++.+++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998774 67777666555444   3568889999999999999999998876


Q ss_pred             ------CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          107 ------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       107 ------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                            +++|++|||||..  ....+.+.+.+.|++++++|+.+++.+++++++.+.+  .+++|++||..+..+.+++.
T Consensus        83 ~~~~~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIG--TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             ccccCCCCccEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCc
Confidence                  4799999999976  4455778899999999999999999999999998854  37899999999888888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|+.+|++++.++++++.++.+.|++++.++||+++|++......       .+............ ++..+++|+|+++
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~dva~~~  230 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-------DPEIRNFATNSSVF-GRIGQVEDIADAV  230 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-------ChhHHHHHHhcCCc-CCCCCHHHHHHHH
Confidence            999999999999999999999899999999999999998654321       11111222222223 7788999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      .+++++...+++|+.++++||+++
T Consensus       231 ~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        231 AFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHHcCcccCCcCCCEEEeCCCccC
Confidence            999998878899999999999764

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=258.55  Aligned_cols=250  Identities=28%  Similarity=0.410  Sum_probs=210.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+...+.+ +.+++++.+|++|++++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999999988877766655 3468889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||+|..  ....+.+.+.++|.+.+++|+.+++.+++++.+.+.+++.+++|++||..+..+ .....|+.+|++++.+
T Consensus        82 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         82 VANAGAA--RAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence            9999987  344567788999999999999999999999999998777789999999766533 3456899999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS  272 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~t  272 (297)
                      ++.++.++.++||+|+.++||+++|++.......      ............ +.+++++++|+++++++|+++...+++
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~~~~~~~~  231 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA------NPQVFEELKKWY-PLQDFATPDDVANAVLFLASPAARAIT  231 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc------ChHHHHHHHhcC-CCCCCCCHHHHHHHHHHHcCchhcCcC
Confidence            9999999999999999999999999875422110      111111111122 237889999999999999998888999


Q ss_pred             ccEEEecCCcccccCCCCCCC
Q 022418          273 GHNLVVDGGFTSFKNLKLPAP  293 (297)
Q Consensus       273 G~~i~vdgG~~~~~~~~~~~~  293 (297)
                      |+.+.+|||+....++.+.++
T Consensus       232 g~~~~~~~g~~~~~~~~~~~~  252 (257)
T PRK07074        232 GVCLPVDGGLTAGNREMARTL  252 (257)
T ss_pred             CcEEEeCCCcCcCChhhhhhh
Confidence            999999999999888776654

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=256.27  Aligned_cols=239  Identities=33%  Similarity=0.463  Sum_probs=201.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++|||++++||.++++.|+++|++|++++|+.+..++..+..  ...++.+|+++++++.++++.    ++++
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~----~~~~   78 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAA----AGAF   78 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHH----hCCC
Confidence            5688999999999999999999999999999999999988777665554  356788999999988887765    4689


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |++|||+|..  ......+.+.++|++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..+.+....|+.+|++
T Consensus        79 d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a  156 (245)
T PRK07060         79 DGLVNCAGIA--SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAA  156 (245)
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHH
Confidence            9999999986  445566788999999999999999999999999886544 4899999999998888888999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.+++.++.++.+.||++++++||+++|++....+.      ....... ..... +.+++.+|+|+|+++.+++++..
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~------~~~~~~~-~~~~~-~~~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS------DPQKSGP-MLAAI-PLGRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc------CHHHHHH-HHhcC-CCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999899999999999999997543221      1111111 11222 33788999999999999999988


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+.+.+|||+.+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        229 SMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CCccCcEEeECCCccC
Confidence            9999999999999864

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-36  Score=257.45  Aligned_cols=229  Identities=19%  Similarity=0.230  Sum_probs=197.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCC--HHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTK--ESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~--~~~i~~~~~~~~~  104 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +..+.++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999998777666554    3457788999986  5688999999988


Q ss_pred             Hc-CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          105 KH-NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      .+ +++|++|||||... ...++.+.++++|++.+++|+.+++.++++++|.+.+.+.+++++++|..+..+.+.+.+|+
T Consensus        83 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFY-ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HhCCCCCEEEEeccccc-cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            87 78999999999753 23457788999999999999999999999999999877779999999999998888888999


Q ss_pred             hhHHHHHHHHHHHHHHHccC-CcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEY-GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +||++++.+++.++.|+.++ +|+|+.|+||+|+|++.......    ..              .....+++|+++.+.+
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~--------------~~~~~~~~~~~~~~~~  223 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG----EA--------------KSERKSYGDVLPAFVW  223 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC----CC--------------ccccCCHHHHHHHHHH
Confidence            99999999999999999877 69999999999999976432110    00              0234589999999999


Q ss_pred             HhcCCCCcccccEEEe
Q 022418          263 LASDDAKYVSGHNLVV  278 (297)
Q Consensus       263 l~~~~~~~~tG~~i~v  278 (297)
                      ++++...++||++|.|
T Consensus       224 ~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        224 WASAESKGRSGEIVYL  239 (239)
T ss_pred             HhCccccCcCCeEeeC
Confidence            9999999999999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=257.48  Aligned_cols=249  Identities=28%  Similarity=0.389  Sum_probs=207.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..+++|+++||||+++||++++++|+++|++ |++++|+.+..+...+++   +.++.++.+|+++++++.++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999 999999877666544433   456788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++++|++|||+|..  ....+.+.+.+.|++++++|+.+++.+++++++.+.++. .+++|++||..+..+.+....|+.
T Consensus        82 ~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 FGRLDALVNAAGLT--DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             hCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            99999999999986  445577889999999999999999999999999996543 589999999998888888889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++...||+|+.++||+++|++....... +........ ...... .+.++.++++|+|+.+.+++
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~-~~~~~~-~~~~~~~~~~~~a~~~~~l~  236 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQRE-FHGAPDDWL-EKAAAT-QPFGRLLDPDEVARAVAFLL  236 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhh-ccCCChHHH-HHHhcc-CCccCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999975432111 111111111 111122 23377889999999999999


Q ss_pred             cCCCCcccccEEEecCCcc
Q 022418          265 SDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++...+++|+.|.+|||.+
T Consensus       237 ~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        237 SDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             ChhhCCccCceEeECCccc
Confidence            9888899999999999975

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-35  Score=255.55  Aligned_cols=242  Identities=30%  Similarity=0.460  Sum_probs=200.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |++++++++|||+++|||.++++.|+++|++|++++|+.+++++..+++   +.++.++.+|+++++++.++++.+.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999987776665544   4578889999999999999999998888


Q ss_pred             CCccEEEECccCCCCCC------Ccc-CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCC
Q 022418          107 NQLDIMYNNAGVACKTP------RSI-VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLA  178 (297)
Q Consensus       107 g~id~li~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~  178 (297)
                      +++|++|||||......      ..+ .+.+.++++.++++|+.+++.+.+.+.|.+.++ ..++++++||.. ..+.++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence            89999999999753111      112 567889999999999999999999999999655 457888888864 567778


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      ...|+.+|++++.++++++.++.++||++++++||+++|++.....        +. ......... +.+++.+|+|+|+
T Consensus       160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~--------~~-~~~~~~~~~-~~~~~~~~~~~a~  229 (253)
T PRK08217        160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK--------PE-ALERLEKMI-PVGRLGEPEEIAH  229 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--------HH-HHHHHHhcC-CcCCCcCHHHHHH
Confidence            8999999999999999999999989999999999999999864321        11 111111222 2367889999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      .+.+|++.  .+++|+++++|||+.+
T Consensus       230 ~~~~l~~~--~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        230 TVRFIIEN--DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHHHHcC--CCcCCcEEEeCCCccC
Confidence            99999953  5889999999999853

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-35  Score=258.77  Aligned_cols=229  Identities=27%  Similarity=0.328  Sum_probs=191.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++...   ..++++.+|++|+++++++++++.+.++++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999999999999999999887765543   357889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ..+++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+++|++++.|
T Consensus        79 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  156 (273)
T PRK06182         79 VNNAGYG--SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF  156 (273)
T ss_pred             EECCCcC--CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHH
Confidence            9999987  55667888999999999999999999999999999887789999999998888777778899999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC---C-HHH---HHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV---D-ASR---LLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~-~~~---~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++++.|+.++||+|++|+||+++|++............   . .+.   ......... ..+++.+|+|+|++++++++
T Consensus       157 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        157 SDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY-GSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh-ccccCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999998643222111000   0 000   111111111 23678899999999999998


Q ss_pred             CC
Q 022418          266 DD  267 (297)
Q Consensus       266 ~~  267 (297)
                      ..
T Consensus       236 ~~  237 (273)
T PRK06182        236 AR  237 (273)
T ss_pred             CC
Confidence            54

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-35  Score=252.70  Aligned_cols=242  Identities=38%  Similarity=0.567  Sum_probs=208.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++++|+++||||+++||.+++++|+++|++|+++ +|+.+..++..+.+   +.++.++.+|+++++++.++++.+.++
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999998 99887766655543   346888999999999999999999998


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||+|..  ....+.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.+
T Consensus        81 ~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s  158 (247)
T PRK05565         81 FGKIDILVNNAGIS--NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSAS  158 (247)
T ss_pred             hCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHH
Confidence            99999999999987  4455677889999999999999999999999999987778899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+.|+++++++||+++|++.+.....        ...... ... +.+++.+|+|+++.++++++
T Consensus       159 K~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~--------~~~~~~-~~~-~~~~~~~~~~va~~~~~l~~  228 (247)
T PRK05565        159 KGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE--------DKEGLA-EEI-PLGRLGKPEEIAKVVLFLAS  228 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH--------HHHHHH-hcC-CCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999998999999999999999876543211        111111 112 23667899999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +....++|+.+.+|+|++
T Consensus       229 ~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        229 DDASYITGQIITVDGGWT  246 (247)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            988999999999999975

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=259.77  Aligned_cols=247  Identities=24%  Similarity=0.262  Sum_probs=202.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.+++..+..+..+.++++|++|++++.++++.+.+.++++|++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999999988877766666678889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ..+++.+.+.++|++.+++|+.+++.++++++|.+++++.+++|++||..+..+.+.+..|+.+|++++.+
T Consensus        82 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (275)
T PRK08263         82 VNNAGYG--LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGM  159 (275)
T ss_pred             EECCCCc--cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence            9999987  55667888999999999999999999999999999877778999999999999988889999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHHHhcCCCCcc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-CEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dia~~~~~l~~~~~~~~  271 (297)
                      ++.++.++.+.||+|+.++||+++|++..............+......... ...+++ ++|+|+|++++++++++.  .
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~dva~~~~~l~~~~~--~  236 (275)
T PRK08263        160 SEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ-WSERSVDGDPEAAAEALLKLVDAEN--P  236 (275)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH-HHhccCCCCHHHHHHHHHHHHcCCC--C
Confidence            999999999999999999999999998742211000000001111111111 122556 899999999999998652  3


Q ss_pred             cccEEEecCCccc
Q 022418          272 SGHNLVVDGGFTS  284 (297)
Q Consensus       272 tG~~i~vdgG~~~  284 (297)
                      .++.+...++..+
T Consensus       237 ~~~~~~~~~~~~~  249 (275)
T PRK08263        237 PLRLFLGSGVLDL  249 (275)
T ss_pred             CeEEEeCchHHHH
Confidence            5566655554443

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=3.6e-35  Score=286.07  Aligned_cols=253  Identities=32%  Similarity=0.438  Sum_probs=209.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----C-CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----G-PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~-~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+.++...+++    + .++..+.+|++|++++.++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988776665543    1 357789999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +.+|++|++|||||..  ...++.+.+.++|+..+++|+.+++.+++.+++.|++++ .+++|++||..+..+.+...+|
T Consensus       489 ~~~g~iDilV~nAG~~--~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY  566 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIA--TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY  566 (676)
T ss_pred             HhcCCCcEEEECCCCC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHH
Confidence            9999999999999976  445577888999999999999999999999999997654 5799999999999998889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCc--chhhHHHH---hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP--FVMEEMSQ---IYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      +++|++++.++++++.++.+.||+||+|+||.|.++  ++...+..   ..................+. ++.++|+|+|
T Consensus       567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v~peDVA  645 (676)
T TIGR02632       567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHIFPADIA  645 (676)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCcCHHHHH
Confidence            999999999999999999999999999999999753  32211100   00111122222222333344 8889999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++.+|+++...++||+++++|||..-
T Consensus       646 ~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       646 EAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHHhCCcccCCcCcEEEECCCchh
Confidence            999999998888999999999999764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=7.6e-35  Score=251.89  Aligned_cols=244  Identities=33%  Similarity=0.500  Sum_probs=208.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+......+.+   +.++.++.+|++|+++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999977666555444   34588899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK  186 (297)
                      ++|++|||+|..  ...++.+.+.+++++.++.|+.+++.+++.+.|.+.+++.+++|++||..+. .+.+....|+.+|
T Consensus        83 ~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIF--PLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            999999999987  3455667889999999999999999999999999977777899999999887 7778888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.|++++.++||.++|++.......        ..........+. +++++++|+|+++.+++++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  231 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--------QWAEAIAAAIPL-GRLGEPEDIAAAVLFLASD  231 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--------HHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            9999999999999988899999999999999976443211        101111222233 5789999999999999988


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      ...+++|+++.+|||+.+.
T Consensus       232 ~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        232 EARYITGQTLPVDGGATLP  250 (251)
T ss_pred             cccCcCCcEEEECCCccCC
Confidence            8788999999999998753

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-35  Score=251.54  Aligned_cols=238  Identities=34%  Similarity=0.558  Sum_probs=201.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC----chhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ----HQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~----~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++|+++||||+++||+++++.|+++|++|++++|.    .+..++..+++   +.++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999987653    33444443333   4578899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHH-HhccCCCCceEEEEecccccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST-RVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +.++++|.+|||+|..  ...++.+.+.++|++.+++|+.+++.+++++. +.+++++.+++|++||..+..+.+++..|
T Consensus        83 ~~~~~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         83 EEFGRLDILVNNAGIA--TDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHhCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            9889999999999987  44567788999999999999999999999999 66666667899999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.+|++++.+++.++.++.+.||++++++||+++|++.......           .......+. ....+++|+|+.+++
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~va~~~~~  228 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-----------EHLLNPVPV-QRLGEPDEVAALVAF  228 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-----------HHHHhhCCC-cCCcCHHHHHHHHHH
Confidence            99999999999999999998899999999999999976543211           111111222 556799999999999


Q ss_pred             HhcCCCCcccccEEEecCCc
Q 022418          263 LASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ++++...+++|+.+.+|||+
T Consensus       229 l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        229 LVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HcCcccCCccCcEEEeCCCC
Confidence            99888889999999999996

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=251.75  Aligned_cols=240  Identities=23%  Similarity=0.282  Sum_probs=197.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~-~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++..+|+++||||++|||++++++|+++|++|++++++ .+..++..+++   +.+++++.+|++|.+++.++++++.+
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999887664 44444444433   55688999999999999999999998


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      .++++|++|||||..  ...++.+.++++|++++++|+.+++.+++++.+.+.+...+++|+++|..+..+.+.+..|+.
T Consensus        84 ~~~~iD~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         84 ALGPITLLVNNASLF--EYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             HcCCCCEEEECCcCC--CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            889999999999986  444577889999999999999999999999999997766789999998777777777779999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++.+. |+|++|+||++.|+....          ...+... ....+. ++..+|+|+|+++++++
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~----------~~~~~~~-~~~~~~-~~~~~~~d~a~~~~~~~  228 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS----------PEDFARQ-HAATPL-GRGSTPEEIAAAVRYLL  228 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC----------hHHHHHH-HhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999998765 999999999998864211          1111111 111222 66789999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.  .+++|+.+.+|||..+.
T Consensus       229 ~~--~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        229 DA--PSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             cC--CCcCCCEEEECCCeecc
Confidence            74  56899999999998544

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=257.71  Aligned_cols=217  Identities=30%  Similarity=0.408  Sum_probs=193.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++|||||+|||++++++|+++|++|++++|+.+.+++..++++ ++.++.+|++|+++++++++.+.+.++++
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45788999999999999999999999999999999999988877766654 57889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||..  ....+.+.+.+++++++++|+.+++.+++.++|.|.+++.+++|++||..+..+.+.+..|+++|+++
T Consensus        80 d~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  157 (273)
T PRK07825         80 DVLVNNAGVM--PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAV  157 (273)
T ss_pred             CEEEECCCcC--CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHH
Confidence            9999999987  45567788999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +.|++.++.|+.+.||+++.|+||+++|++......                   ......++|+|+|+.++.++.+..
T Consensus       158 ~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-------------------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        158 VGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-------------------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-------------------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999987543200                   001346799999999999997653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.7e-34  Score=248.97  Aligned_cols=243  Identities=36%  Similarity=0.539  Sum_probs=205.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++|||++++||++++++|+++|++|+++.|+.+. .+...+++   +.++.++.+|+++++++.++++++.++
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999888877653 33333332   457888999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++||++|..  ......+.+.+.+++.+++|+.+++.+.+++.+.+.+.+.+++|++||..+..+.+....|+.+
T Consensus        81 ~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~s  158 (248)
T PRK05557         81 FGGVDILVNNAGIT--RDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAAS  158 (248)
T ss_pred             cCCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHH
Confidence            99999999999987  4455667889999999999999999999999999977777899999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+.|++++.++||+++|++.....        .. .........+. +++.+++|+|+++.+|+.
T Consensus       159 k~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~--------~~-~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        159 KAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP--------ED-VKEAILAQIPL-GRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC--------hH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            999999999999999989999999999999998764321        11 11111222223 667899999999999998


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...+++|+.+++|||+++
T Consensus       229 ~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cccCCccccEEEecCCccC
Confidence            8778899999999999875

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=266.23  Aligned_cols=237  Identities=29%  Similarity=0.351  Sum_probs=198.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++.+.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            3578899999999999999999999999999999999988877766554   5678899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||..  ...++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.+.+..|+++|
T Consensus        84 g~iD~lInnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         84 GPIDTWVNNAMVT--VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             CCCCEEEECCCcC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHH
Confidence            9999999999976  45567889999999999999999999999999999887789999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHcc--CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCE--YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.|+++++.|+..  .+|+|+.|+||.++|++........            ..... +..++.+|+|+|+++++++
T Consensus       162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~------------~~~~~-~~~~~~~pe~vA~~i~~~~  228 (334)
T PRK07109        162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRL------------PVEPQ-PVPPIYQPEVVADAILYAA  228 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhc------------ccccc-CCCCCCCHHHHHHHHHHHH
Confidence            9999999999999875  4699999999999999764321100            00111 1256789999999999999


Q ss_pred             cCCC--CcccccEEEecCC
Q 022418          265 SDDA--KYVSGHNLVVDGG  281 (297)
Q Consensus       265 ~~~~--~~~tG~~i~vdgG  281 (297)
                      +++.  .++++....++.+
T Consensus       229 ~~~~~~~~vg~~~~~~~~~  247 (334)
T PRK07109        229 EHPRRELWVGGPAKAAILG  247 (334)
T ss_pred             hCCCcEEEeCcHHHHHHHH
Confidence            8652  2334444444433

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-34  Score=249.91  Aligned_cols=246  Identities=24%  Similarity=0.362  Sum_probs=201.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHH---HhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAK---ELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++++++||||+++||++++++|+++|++|++..|+. +...+...   +.+.++..+.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999998876543 33333222   22456788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ...++.+.+.+.+++.+++|+.+++.+++++.|.+++  .+++|++||..+..+.+++..|+.+
T Consensus        82 ~~~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         82 YGVADILVNNAGLG--LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHH
Confidence            99999999999986  4445667888999999999999999999999999864  4799999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+ +|+++.+.||+++|++........  ......   ... .....+++++|+|+|++++++++
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~--~~~~~~---~~~-~~~~~~~~~~~~dva~~~~~~~~  230 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVL--GMSEKE---FAE-KFTLMGKILDPEEVAEFVAAILK  230 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcc--cccHHH---HHH-hcCcCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999987 899999999999999754332110  001111   111 11223678999999999999996


Q ss_pred             CCCCcccccEEEecCCcccccCC
Q 022418          266 DDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      .  ...+|+.+++|+|..++.+.
T Consensus       231 ~--~~~~g~~~~i~~g~~~~~~~  251 (252)
T PRK06077        231 I--ESITGQVFVLDSGESLKGGI  251 (252)
T ss_pred             c--cccCCCeEEecCCeeccCCC
Confidence            4  35789999999999998775

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=5.2e-36  Score=244.45  Aligned_cols=242  Identities=26%  Similarity=0.340  Sum_probs=203.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |+++||.+++||+.+|||++++++|+++|.++.+++.+.+..+..++-.    ...+.+++||+++.+++++.++++..+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999988888877655554332    457889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCCCccc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +|.+|++||+||++          +.++|++.+.+|+.+.+.-+..++|+|.++.   .|-||++||+.+..|.+....|
T Consensus        81 fg~iDIlINgAGi~----------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   81 FGTIDILINGAGIL----------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             hCceEEEEcccccc----------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            99999999999987          2467999999999999999999999998754   6799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHH--HccCCcEEEEEeCCCccCcchhhHHH-HhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAE--LCEYGIRINCISPFAIPTPFVMEEMS-QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~e--l~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ++||+++-.|+|+++..  +.+.||+++++|||++.|++.....+ ..+.+++.... +......     .-+|.++++.
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~-~~l~~~~-----~q~~~~~a~~  224 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIK-EALERAP-----KQSPACCAIN  224 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHH-HHHHHcc-----cCCHHHHHHH
Confidence            99999999999999876  45679999999999999999887755 34444443333 3322221     2369999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCcccccCCCCC
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      ++.+++..   .+|+...+|+|- +....+.+
T Consensus       225 ~v~aiE~~---~NGaiw~v~~g~-l~~~~~~~  252 (261)
T KOG4169|consen  225 IVNAIEYP---KNGAIWKVDSGS-LEPVFKTS  252 (261)
T ss_pred             HHHHHhhc---cCCcEEEEecCc-EEEeeecc
Confidence            99999773   799999999998 55444443

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-35  Score=249.60  Aligned_cols=236  Identities=27%  Similarity=0.370  Sum_probs=204.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++++|+++||||+++||++++++|+++|++|++++|+.++..+..+++ ......+.+|++|.+++.++++++.+.++
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35688999999999999999999999999999999999887766554444 23567788999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++||++|..  ....+.+.+.+++++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+.+.+..|+.+|+
T Consensus        82 ~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (239)
T PRK12828         82 RLDALVNIAGAF--VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA  159 (239)
T ss_pred             CcCEEEECCccc--CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence            999999999976  344466778999999999999999999999999997777889999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||+++.++||+++|++......       ...           ...+++++|+|+++.+++++.
T Consensus       160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~-------~~~-----------~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        160 GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP-------DAD-----------FSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC-------chh-----------hhcCCCHHHHHHHHHHHhCcc
Confidence            99999999999998889999999999999985432110       000           144678999999999999987


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|+.+.+|||+++
T Consensus       222 ~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        222 AQAITGASIPVDGGVAL  238 (239)
T ss_pred             cccccceEEEecCCEeC
Confidence            77899999999999865

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-34  Score=250.05  Aligned_cols=254  Identities=31%  Similarity=0.464  Sum_probs=209.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC-CCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++||||+|+||++++++|+++|++|++++|+.+..++..+... .++.++.+|++|++++.++++++.+.+++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999999887776655542 25688999999999999999999998899


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC-ceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++||++|... ......+.+.+++++++++|+.+++.+++.+.+.+...+. ++++++||..+..+.+.+..|+.+|+
T Consensus        87 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~  165 (264)
T PRK12829         87 LDVLVNNAGIAG-PTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKW  165 (264)
T ss_pred             CCEEEECCCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHH
Confidence            999999999763 2344667889999999999999999999999998876555 78999999888888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC--HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD--ASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.+++.++.++...++++++++||+++|++.............  ............+ .+++++++|+|+++.++++
T Consensus       166 a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~~  244 (264)
T PRK12829        166 AVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKIS-LGRMVEPEDIAATALFLAS  244 (264)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCC-CCCCCCHHHHHHHHHHHcC
Confidence            999999999999988899999999999999987655432111111  1111111112222 2678999999999999998


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +....++|+.+++|||.+.+
T Consensus       245 ~~~~~~~g~~~~i~~g~~~~  264 (264)
T PRK12829        245 PAARYITGQAISVDGNVEYL  264 (264)
T ss_pred             ccccCccCcEEEeCCCcccC
Confidence            77778899999999998753

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=248.12  Aligned_cols=232  Identities=28%  Similarity=0.441  Sum_probs=194.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.      ..  ...++.+|++++++++++++++.+.+ ++|++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~v   72 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF--PGELFACDLADIEQTAATLAQINEIH-PVDAI   72 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc--CceEEEeeCCCHHHHHHHHHHHHHhC-CCcEE
Confidence            57899999999999999999999999999999998754      11  12578999999999999999998876 68999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||+|..  ...++.+.+.+++++.+++|+.+++.+.++++|.+++.+.+++|++||.. ..+.+....|+.+|++++.+
T Consensus        73 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~  149 (234)
T PRK07577         73 VNNVGIA--LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGC  149 (234)
T ss_pred             EECCCCC--CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHH
Confidence            9999986  44556778899999999999999999999999999877778999999985 45667788999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS  272 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~t  272 (297)
                      ++.++.++.+.||++++|+||+++|++.....+.     .. ..........+. ++..+|+|+|+.+++|++++..+++
T Consensus       150 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-----~~-~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~  222 (234)
T PRK07577        150 TRTWALELAEYGITVNAVAPGPIETELFRQTRPV-----GS-EEEKRVLASIPM-RRLGTPEEVAAAIAFLLSDDAGFIT  222 (234)
T ss_pred             HHHHHHHHHhhCcEEEEEecCcccCccccccccc-----ch-hHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCcccCCcc
Confidence            9999999999999999999999999986532110     01 111111122223 6677999999999999998888999


Q ss_pred             ccEEEecCCcc
Q 022418          273 GHNLVVDGGFT  283 (297)
Q Consensus       273 G~~i~vdgG~~  283 (297)
                      |+.+.+|||..
T Consensus       223 g~~~~~~g~~~  233 (234)
T PRK07577        223 GQVLGVDGGGS  233 (234)
T ss_pred             ceEEEecCCcc
Confidence            99999999954

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=254.35  Aligned_cols=232  Identities=25%  Similarity=0.262  Sum_probs=192.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++.+.+..+.++.++.+|++|++++.++++.+.+.++++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999999999888777666555678889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ......+.+.++|++++++|+.+++.++++++|.+++++.+++|++||.++..+.+++..|+.+|++++.+
T Consensus        83 v~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         83 VNNAGYG--HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EECCCcc--CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            9999986  45567788999999999999999999999999999887778999999999999988999999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh---hcCCCHHHHHHHH-HhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI---YAGVDASRLLELV-YSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++.++.++.+.|+++++|+||+++|++........   ...+ ........ ........++.+|+|+|++++++++.+
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADY-DALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhH-HHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999998653221110   0000 00011110 011112256789999999999998765

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-34  Score=269.99  Aligned_cols=241  Identities=29%  Similarity=0.388  Sum_probs=203.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH--QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..+++|+++||||++|||.+++++|+++|++|++++|..  +.+++..++++  ..++.+|++++++++++++.+.+.++
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999998853  34444444443  45789999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ..+.+.+.+.++|+..+++|+.+++.+.+++.+.+..++.+++|++||..+..+.+.+..|+.+|+
T Consensus       284 ~id~vi~~AG~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKa  361 (450)
T PRK08261        284 GLDIVVHNAGIT--RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKA  361 (450)
T ss_pred             CCCEEEECCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHH
Confidence            999999999987  455677889999999999999999999999999655456689999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.++.++||++|+|+||+++|++......      ..   .+......+. .+...|+|+|+++.||+++.
T Consensus       362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~------~~---~~~~~~~~~l-~~~~~p~dva~~~~~l~s~~  431 (450)
T PRK08261        362 GVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF------AT---REAGRRMNSL-QQGGLPVDVAETIAWLASPA  431 (450)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch------hH---HHHHhhcCCc-CCCCCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999987643210      00   0111111122 55678999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..++||++|.+|||..+
T Consensus       432 ~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        432 SGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hcCCCCCEEEECCCccc
Confidence            99999999999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=253.62  Aligned_cols=246  Identities=24%  Similarity=0.320  Sum_probs=202.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CC-CeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP-NATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~-~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +. .+.++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999988776665544   22 345678999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      ++|||+|..  ..+.+.+.+.+++++.+++|+.+++.++++++|.|.++ ..+++|++||..+..+.+....|+++|+++
T Consensus        81 ~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGIS--AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            999999976  45567889999999999999999999999999999654 358999999999888888888999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.|+.++||+|+.|+||+++|++....... ..+...+......  ... .++.++|+|+|+.++++++.. .
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~-~~~~~~~~~vA~~~~~~~~~~-~  233 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIA-GVDREDPRVQKWV--DRF-RGHAVTPEKAAEKILAGVEKN-R  233 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhccccc-ccCcchhhHHHHH--Hhc-ccCCCCHHHHHHHHHHHHhcC-C
Confidence            9999999999999999999999999999986543110 0000111111111  111 256789999999999999654 7


Q ss_pred             cccccEEEecCCcccccC
Q 022418          270 YVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~  287 (297)
                      +++++.+..++|+.+..-
T Consensus       234 ~~~~~~~~~~~~~~~~~~  251 (272)
T PRK07832        234 YLVYTSPDIRALYWFKRK  251 (272)
T ss_pred             eEEecCcchHHHHHHHhc
Confidence            899999999999776543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=6.9e-34  Score=244.90  Aligned_cols=243  Identities=33%  Similarity=0.512  Sum_probs=207.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |++.+|+++||||+++||.+++++|+++|++|++++|+.+..+.....+   +.++.++.+|++|++++.++++++...+
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999999988766555443   5678899999999999999999998888


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++||++|..  ......+.+.+++++.++.|+.++..+++.+.+.+.+.+.+++|++||..+..+..++..|+.+|
T Consensus        81 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk  158 (246)
T PRK05653         81 GALDILVNNAGIT--RDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAK  158 (246)
T ss_pred             CCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHH
Confidence            9999999999976  34556678899999999999999999999999999776678999999998888888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.+++++.+.|+++++++||.+++++......         ..........+ .+.+++++|+++.+.+++++
T Consensus       159 ~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~dva~~~~~~~~~  228 (246)
T PRK05653        159 AGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE---------EVKAEILKEIP-LGRLGQPEEVANAVAFLASD  228 (246)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH---------HHHHHHHhcCC-CCCCcCHHHHHHHHHHHcCc
Confidence            999999999999998889999999999999987653111         11111111222 26788999999999999998


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ....++|+++.+|||+.+
T Consensus       229 ~~~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        229 AASYITGQVIPVNGGMYM  246 (246)
T ss_pred             hhcCccCCEEEeCCCeeC
Confidence            888899999999999853

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-34  Score=247.45  Aligned_cols=234  Identities=24%  Similarity=0.378  Sum_probs=201.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCC--CHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT--KESDVSDAVDFT  102 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s--~~~~i~~~~~~~  102 (297)
                      ...+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++    ..++.++.+|++  +++++.++++.+
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999988776665554    245677778886  789999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .+.++++|++|||||... ...++.+.+.+.|++.+++|+.+++.+++++.+.|.+++.+++|++||..+..+.+.+..|
T Consensus        87 ~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y  165 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLG-ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAY  165 (247)
T ss_pred             HHHhCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCccc
Confidence            999999999999999763 2345667888999999999999999999999999988778999999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.+++.++.++...||++++++||+++|++....+...                  ....+.+|+|+++.+.+
T Consensus       166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~  227 (247)
T PRK08945        166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE------------------DPQKLKTPEDIMPLYLY  227 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc------------------cccCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654322110                  01457899999999999


Q ss_pred             HhcCCCCcccccEEEecCC
Q 022418          263 LASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG  281 (297)
                      ++++...+++|+++...-|
T Consensus       228 ~~~~~~~~~~g~~~~~~~~  246 (247)
T PRK08945        228 LMGDDSRRKNGQSFDAQPG  246 (247)
T ss_pred             HhCccccccCCeEEeCCCC
Confidence            9999889999999876543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1e-33  Score=245.57  Aligned_cols=249  Identities=32%  Similarity=0.496  Sum_probs=206.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|++++.++++.+.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999999988776665543   45688999999999999999999998888999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||+|..  ......+.+.+++++++++|+.+++.+++++++.+++.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQ--HVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            999999986  344456778899999999999999999999999997777789999999988888888899999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .+++.++.++.+.+|+++.++||.++|++..........  ..................+.+++++|+|+++++++++..
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  238 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAA  238 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccc
Confidence            999999999988899999999999999986554432211  111111111111112123568999999999999998766


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      ...+|+++++|||+..
T Consensus       239 ~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       239 AGITGQAIVLDGGWTA  254 (255)
T ss_pred             cCccceEEEEcCcccc
Confidence            7789999999999863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.1e-34  Score=257.25  Aligned_cols=236  Identities=21%  Similarity=0.182  Sum_probs=191.2

Q ss_pred             EEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           38 LITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        38 lVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +||||++|||++++++|+++| ++|++++|+.+.+++..+++   +.++.++.+|++|.++++++++.+.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 99999999988877776665   34678889999999999999999998888999999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEeccccccc----------------
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLG----------------  175 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~----------------  175 (297)
                      ||||+.. ......+.+.++|++.+++|+.+++.+++.++|.|++++  .|+||++||..+..+                
T Consensus        81 nnAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYL-PTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999853 222456778999999999999999999999999998765  589999999876421                


Q ss_pred             -------------------CCCCccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCc-cCcchhhHHHHhhcCCCHH
Q 022418          176 -------------------GLAQHTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAI-PTPFVMEEMSQIYAGVDAS  234 (297)
Q Consensus       176 -------------------~~~~~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~  234 (297)
                                         ..++.+|+.||+|+..+++.+++++.+ .||+|++|+||+| +|++.......      ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~------~~  233 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL------FR  233 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH------HH
Confidence                               123567999999999999999999965 6999999999999 78886532111      00


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          235 RLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ...... ...+ .+++.+|++.|+.+++++++...+.+|+.+..||+.
T Consensus       234 ~~~~~~-~~~~-~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        234 LLFPPF-QKYI-TKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHH-HHHH-hcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            000000 0111 256789999999999999987778999999998874

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.4e-34  Score=278.44  Aligned_cols=252  Identities=33%  Similarity=0.451  Sum_probs=214.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..++||+++||||+||||++++++|+++|++|++++|+.+.++...+.++.  .+.++.+|+++++++.++++++.+.+|
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            347899999999999999999999999999999999999888777766643  788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC-ceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|++|||||..  ....+.+.+.++|++.+++|+.+++.+++.+.+.+++++. +++|++||..+..+.+....|+++|
T Consensus       498 ~iDvvI~~AG~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        498 GVDIVVSNAGIA--ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            999999999987  5566788899999999999999999999999999987664 8999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCc--cCcchhhHHHH---hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAI--PTPFVMEEMSQ---IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v--~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      ++++.+++.++.++.+.||+||.|+||.+  +|+++...+..   .......+.......... +.+++++++|+|++++
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~l~~~v~~~DvA~a~~  654 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARN-LLKREVTPEDVAEAVV  654 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcC-CcCCccCHHHHHHHHH
Confidence            99999999999999999999999999999  78765433211   111122222222222333 3478999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++++.....+|+++++|||...
T Consensus       655 ~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        655 FLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHhCccccCCcCCEEEECCCchh
Confidence            99987778899999999999764

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=249.96  Aligned_cols=230  Identities=22%  Similarity=0.259  Sum_probs=189.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc-CCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH-NQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~-g~id~  111 (297)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++++.+   ..+.++.+|++|+++++++++++.+.+ +++|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            36899999999999999999999999999999999887766544   257788999999999999999997766 68999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      +|||||..  ..+.+.+.+.+++++++++|+.+++.+++.++|.|.+++.+++|++||..+..+.+....|++||++++.
T Consensus        80 li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  157 (277)
T PRK05993         80 LFNNGAYG--QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG  157 (277)
T ss_pred             EEECCCcC--CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence            99999987  4566788899999999999999999999999999988888999999999999888889999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc------CCCHHHHHHH---HHhcCCCCCCCCCHHHHHHHHHH
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA------GVDASRLLEL---VYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      |+++++.|+.++||+|++|+||+++|++..........      ....+.+...   ...........++||++|+.++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~  237 (277)
T PRK05993        158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH  237 (277)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999987654322110      0001111110   00111111335789999999999


Q ss_pred             HhcCC
Q 022418          263 LASDD  267 (297)
Q Consensus       263 l~~~~  267 (297)
                      .+..+
T Consensus       238 a~~~~  242 (277)
T PRK05993        238 ALTAP  242 (277)
T ss_pred             HHcCC
Confidence            98765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=4.8e-34  Score=247.19  Aligned_cols=233  Identities=20%  Similarity=0.293  Sum_probs=194.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+||||.+++++|+++|++|++++|+.+.++...+.++.+++++.+|++|+++++++++++.+.++++|++||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999999999999999999998887776666667889999999999999999999999999999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||... ...+..+.+.++|++++++|+.+++.+++.+.|.+.+.+.+++|++||..+..+.++...|+.+|++++.+++
T Consensus        81 ~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538         81 NAGLAL-GLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHH
Confidence            999752 2334667889999999999999999999999999987777899999999988888888999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      .++.++.+.||+++.|+||+++|++.... ...     ......... .    ....++|+|+|++++++++....+.++
T Consensus       160 ~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~-----~~~~~~~~~-~----~~~~~~~~dvA~~~~~l~~~~~~~~~~  229 (248)
T PRK10538        160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-----DDGKAEKTY-Q----NTVALTPEDVSEAVWWVATLPAHVNIN  229 (248)
T ss_pred             HHHHHhcCCCcEEEEEeCCeecccccchhhccC-----cHHHHHhhc-c----ccCCCCHHHHHHHHHHHhcCCCcccch
Confidence            99999999999999999999986543221 110     011111111 1    134579999999999999877666666


Q ss_pred             cEEEe
Q 022418          274 HNLVV  278 (297)
Q Consensus       274 ~~i~v  278 (297)
                      +....
T Consensus       230 ~~~~~  234 (248)
T PRK10538        230 TLEMM  234 (248)
T ss_pred             hhccc
Confidence            55433

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=9.8e-34  Score=244.51  Aligned_cols=238  Identities=28%  Similarity=0.413  Sum_probs=196.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+++||++++++|+++|++|+++ .|+.+..++...++   +.++..+.+|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999774 67666655554443   45688899999999999999999998899999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC---CCceEEEEecccccccCCC-CccchhhH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR---RSGCILCTASVTGLLGGLA-QHTYSVSK  186 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~vss~~~~~~~~~-~~~Y~~sK  186 (297)
                      ++|||+|... ....+.+.+.++|+.++++|+.+++.+++++++.+.++   ..+++|++||..+..+.+. +..|+.+|
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILF-TQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999753 33456778899999999999999999999999988654   2578999999988877665 36899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.||++++++||.++|++.....       ....... .....+. ++..+|+|+|+.+++++++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-------~~~~~~~-~~~~~~~-~~~~~~~dva~~~~~~~~~  231 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-------EPGRVDR-VKSNIPM-QRGGQPEEVAQAIVWLLSD  231 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-------CHHHHHH-HHhcCCC-CCCcCHHHHHHHHHhhcCh
Confidence            99999999999999999999999999999999753211       1111111 1122223 5667999999999999998


Q ss_pred             CCCcccccEEEecCCc
Q 022418          267 DAKYVSGHNLVVDGGF  282 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~  282 (297)
                      ...+++|+.+.+|||.
T Consensus       232 ~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        232 KASYVTGSFIDLAGGK  247 (247)
T ss_pred             hhcCccCcEEecCCCC
Confidence            8889999999999973

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-35  Score=231.97  Aligned_cols=244  Identities=32%  Similarity=0.466  Sum_probs=217.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+|-+.+||||.+|+|++.+++|+++|+.|++.+-.+++.++..++++.++.+..+|++++++++..++..+.+||++
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEECccCCCCC----CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEecccccccCCCC
Q 022418          110 DIMYNNAGVACKT----PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQ  179 (297)
Q Consensus       110 d~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vss~~~~~~~~~~  179 (297)
                      |.+|||||+....    .+.-...+.|++++.+++|+.++|++.++..-.|.+.      .+|.+|+..|.+++.+..++
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq  164 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ  164 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence            9999999997311    1112235789999999999999999999888888643      36899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      .+|++||.++-.|+.-++++++..|||++.|.||.++||+....         +++...+.....|.+.|+++|.|-+..
T Consensus       165 aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl---------pekv~~fla~~ipfpsrlg~p~eyahl  235 (260)
T KOG1199|consen  165 AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL---------PEKVKSFLAQLIPFPSRLGHPHEYAHL  235 (260)
T ss_pred             hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh---------hHHHHHHHHHhCCCchhcCChHHHHHH
Confidence            99999999999999999999999999999999999999988754         455666777777888999999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +-.+.+  ..|++|++|.+||-.-+
T Consensus       236 vqaiie--np~lngevir~dgalrm  258 (260)
T KOG1199|consen  236 VQAIIE--NPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHHHHh--CcccCCeEEEecceecC
Confidence            988884  46899999999997654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-33  Score=242.16  Aligned_cols=242  Identities=31%  Similarity=0.510  Sum_probs=203.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---HhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAK---ELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.+. .+...+   ..+.+++++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999998887776543 333322   235678899999999999999999998888


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++||++|..  ....+.+.+.+++++.+++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.+....|+.+|
T Consensus        83 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 GRIDILVNNAGIF--EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCCCEEEECCccC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            9999999999976  45556778899999999999999999999999999877778999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.|++++.++||.++|++.......        .... ..... +.+++++++|+++.+.+++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--------~~~~-~~~~~-~~~~~~~~~dva~~~~~~~~~  230 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE--------AREA-KDAET-PLGRSGTPEDIARAVAFLCSD  230 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch--------hHHh-hhccC-CCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999988899999999999999986543211        0000 01122 236688999999999999988


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...+.+|+++.+|||+..
T Consensus       231 ~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        231 ASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cccCcCCCEEEeCCCEee
Confidence            878899999999999753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.7e-34  Score=232.02  Aligned_cols=188  Identities=21%  Similarity=0.270  Sum_probs=172.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++.|.++|||||++|||+++|++|.+.|.+|++++|+++.+++.+.+. +.++..+||+.|.+++++++++++++|+.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-cchheeeecccchhhHHHHHHHHHhhCCch
Confidence            5789999999999999999999999999999999999999999987764 568899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      +++|||||+-....-.-.+...++.++-+.+|+.++.++++.++|++.+++.+.||+|||..++.|......||++|+|+
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAai  159 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAI  159 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHH
Confidence            99999999974322222344577889999999999999999999999999999999999999999988888999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCc
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTP  218 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~  218 (297)
                      +.|+.+++.+++..+|.|.-+.|-.|+|+
T Consensus       160 Hsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         160 HSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999999999999999999996

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-34  Score=245.84  Aligned_cols=240  Identities=18%  Similarity=0.217  Sum_probs=194.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc----
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL----  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i----  109 (297)
                      |+++||||++|||++++++|+++|++|++++|+. +.+++..+..+.+++++.+|++++++++++++++.+.++..    
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            6899999999999999999999999999999987 45555544445678899999999999999999987766532    


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +++|||+|... ....+.+.+.++|.+.+++|+.+++.+++.++|.+++. ..+++|++||..+..+.+++..|+.+|++
T Consensus        82 ~~~v~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         82 IHLINNAGMVA-PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             eEEEEcceecc-cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence            28999999753 33457788999999999999999999999999999764 35799999999998888889999999999


Q ss_pred             HHHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          189 IIGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       189 ~~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++.+++.++.|++  +.||+|++|.||+++|++...........  ........ ... +.+++.+|+|+|+.+++++++
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKED--FTNLDRFI-TLK-EEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCccc--chHHHHHH-HHh-hcCCcCCHHHHHHHHHHHHhc
Confidence            9999999999975  46899999999999999865432111111  11111111 111 236789999999999999988


Q ss_pred             CCCcccccEEEecC
Q 022418          267 DAKYVSGHNLVVDG  280 (297)
Q Consensus       267 ~~~~~tG~~i~vdg  280 (297)
                      . .+.+|+.+.+|+
T Consensus       237 ~-~~~~G~~~~v~~  249 (251)
T PRK06924        237 E-DFPNGEVIDIDE  249 (251)
T ss_pred             c-cCCCCCEeehhh
Confidence            5 789999999885

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-34  Score=247.02  Aligned_cols=214  Identities=28%  Similarity=0.322  Sum_probs=185.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..  ++.++.+|++|++++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47999999999999999999999999999999998887776665522  6889999999999999999999999999999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      +|||||... ......+.+.+++++++++|+.+++.++++++|.|++++.+++|++||..+..+.+....|++||++++.
T Consensus        82 lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISV-GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCC-CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            999999863 2222333788999999999999999999999999988778999999999999998989999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +++.++.|+.++||+|++|+||+++|++.....      +              ......+|+++|+.++..+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~--------------~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------Y--------------PMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------C--------------CCCCccCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998753210      0              00234689999999999997653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=242.70  Aligned_cols=224  Identities=26%  Similarity=0.304  Sum_probs=192.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|+++++++.++++.+.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4589999999999999999999999999999999987766655443   4578899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||+|..  ....+.+.+.+++++++++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+.+..|+.+|+++
T Consensus        85 d~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMA--YTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCcc--CCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            9999999986  44556778899999999999999999999999999877779999999999888888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.++.+.||++++|+||+++|++......       ...        . .....++|+|+|+.+.++++.+..
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~-------~~~--------~-~~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV-------QAD--------F-DRSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCccccccc-------ccc--------c-ccccCCCHHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999999997532100       000        0 014567999999999999997755


Q ss_pred             ccccc
Q 022418          270 YVSGH  274 (297)
Q Consensus       270 ~~tG~  274 (297)
                      ...+.
T Consensus       227 ~~~~~  231 (241)
T PRK07454        227 AVIED  231 (241)
T ss_pred             ceeee
Confidence            44444

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=8.1e-34  Score=243.62  Aligned_cols=222  Identities=22%  Similarity=0.221  Sum_probs=182.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||++|||++++++|+++|  ..|++.+|+....     ....+++++++|++++++++++.    ++++++|++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-----FQHDNVQWHALDVTDEAEIKQLS----EQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-----cccCceEEEEecCCCHHHHHHHH----HhcCCCCEE
Confidence            589999999999999999999985  5666667755321     11356888999999999988754    346799999


Q ss_pred             EECccCCCCC----CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---cCCCCccchhh
Q 022418          113 YNNAGVACKT----PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---GGLAQHTYSVS  185 (297)
Q Consensus       113 i~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---~~~~~~~Y~~s  185 (297)
                      |||||.....    ...+.+.+.+.|++.+++|+.+++.+++.++|.|++.+.++++++||..+..   +.+++..|+++
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~as  151 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRAS  151 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhh
Confidence            9999987421    2346678889999999999999999999999999877778999999866533   34567799999


Q ss_pred             HHHHHHHHHHHHHHHcc--CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCE--YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.|++.++.|+.+  .+|+|++|+||+++|++..+...                 ..+ .++..+|+|+|+.++++
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~-----------------~~~-~~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ-----------------NVP-KGKLFTPEYVAQCLLGI  213 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh-----------------ccc-cCCCCCHHHHHHHHHHH
Confidence            99999999999999986  58999999999999998653210                 111 25678999999999999


Q ss_pred             hcCCCCcccccEEEecCCcc
Q 022418          264 ASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +++...+.+|+++.+|||..
T Consensus       214 ~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        214 IANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHcCChhhCCcEEeeCCcCC
Confidence            99998899999999999874

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=7.4e-34  Score=254.53  Aligned_cols=241  Identities=17%  Similarity=0.152  Sum_probs=189.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++. .+.++.+|++|.++++++++++.+.++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999999999999999999999999888777666552 47889999999999999999999888999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc------------cCC
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL------------GGL  177 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~------------~~~  177 (297)
                      |++|||||...  .  ..+.+.++|+..+++|+.+++.++++++|.+.+.+.+++|++||..+..            +.+
T Consensus       101 D~li~nAg~~~--~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  176 (315)
T PRK06196        101 DILINNAGVMA--C--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYD  176 (315)
T ss_pred             CEEEECCCCCC--C--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCC
Confidence            99999999763  1  2245677899999999999999999999999877678999999976532            233


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ++..|+.||++++.+++.++.++.++||+|++|+||+++|++..........  ......   ....+...++.+|+|+|
T Consensus       177 ~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~a  251 (315)
T PRK06196        177 KWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQV--ALGWVD---EHGNPIDPGFKTPAQGA  251 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhh--hhhhhh---hhhhhhhhhcCCHhHHH
Confidence            4568999999999999999999999999999999999999986432110000  000000   00111112467899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                      ..+++|+.......+|..+..|.
T Consensus       252 ~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        252 ATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHHHHHhcCCccCCCCCeEeCCC
Confidence            99999997654434444444443

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.6e-34  Score=255.99  Aligned_cols=212  Identities=19%  Similarity=0.288  Sum_probs=174.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..|++++|||||+|||+++|++|+++|++|++++|+.+++++..+++     +.++..+.+|+++  ++.+.++++.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999888776654     2467788999985  2233333343333


Q ss_pred             C--CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-c-CCCCccc
Q 022418          107 N--QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-G-GLAQHTY  182 (297)
Q Consensus       107 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~-~~~~~~Y  182 (297)
                      +  ++|++|||||........+.+.+.+++++++++|+.+++.++++++|.|.+++.|++|++||..+.. + .+....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            3  4679999999864223457788999999999999999999999999999888889999999998864 3 4778899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|+++++.|+.++||+|++|+||+++|++.....                  .   .-...+||++|+.++.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~------------------~---~~~~~~p~~~A~~~~~  267 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR------------------S---SFLVPSSDGYARAALR  267 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC------------------C---CCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999764100                  0   0113589999999998


Q ss_pred             HhcC
Q 022418          263 LASD  266 (297)
Q Consensus       263 l~~~  266 (297)
                      .+..
T Consensus       268 ~~~~  271 (320)
T PLN02780        268 WVGY  271 (320)
T ss_pred             HhCC
Confidence            8854

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=240.58  Aligned_cols=227  Identities=23%  Similarity=0.324  Sum_probs=186.8

Q ss_pred             EEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           38 LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        38 lVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +||||++|||++++++|+++|++|++++|+.+.++...+.+  +.+++++.+|+++++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            69999999999999999999999999999987777665554  45788999999999999888875    4789999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHH
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS  195 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  195 (297)
                      +|..  ...++.+.+.+++++++++|+.+++.+++  .+.+  .+.+++|++||..+..+.++...|+.+|++++.+++.
T Consensus        77 ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADT--PGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCC--CCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            9987  44557778899999999999999999999  3444  3468999999999988888889999999999999999


Q ss_pred             HHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccE
Q 022418          196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN  275 (297)
Q Consensus       196 la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~  275 (297)
                      ++.|+.+  |+|+.++||+++|++.......     .............+ .+++.+|+|+|+++++|+++  .+.+|++
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~--~~~~G~~  220 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGD-----AREAMFAAAAERLP-ARRVGQPEDVANAILFLAAN--GFTTGST  220 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhcc-----chHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhcC--CCcCCcE
Confidence            9999865  9999999999999986532111     11111111222222 36778999999999999975  5799999


Q ss_pred             EEecCCccc
Q 022418          276 LVVDGGFTS  284 (297)
Q Consensus       276 i~vdgG~~~  284 (297)
                      +.+|||++.
T Consensus       221 ~~v~gg~~~  229 (230)
T PRK07041        221 VLVDGGHAI  229 (230)
T ss_pred             EEeCCCeec
Confidence            999999764

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=248.40  Aligned_cols=219  Identities=24%  Similarity=0.307  Sum_probs=185.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988877766554   45678899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCC--CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCCCCcc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVD--LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGLAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~~~~~  181 (297)
                      .++++|++|||||...  ...+.+  .++++++..+++|+.+++.++++++|.|++++.+++|++||.++.. +.+....
T Consensus       114 ~~g~id~li~~AG~~~--~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~  191 (293)
T PRK05866        114 RIGGVDILINNAGRSI--RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSV  191 (293)
T ss_pred             HcCCCCEEEECCCCCC--CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcch
Confidence            9999999999999863  333333  2468899999999999999999999999888889999999976654 3566779


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+++|++++.|+++++.|+.++||+|++|+||+++|++......               ..   . ....+||++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~---------------~~---~-~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA---------------YD---G-LPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc---------------cc---C-CCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999998642110               00   0 22468999999999


Q ss_pred             HHhcCC
Q 022418          262 YLASDD  267 (297)
Q Consensus       262 ~l~~~~  267 (297)
                      ..+..+
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            988654

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=243.98  Aligned_cols=220  Identities=22%  Similarity=0.350  Sum_probs=190.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |++++++++||||++|||++++++|+++|++|++++|+.+.+++...++  +.++.++.+|++|+++++++++.+.+ ++
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            4678999999999999999999999999999999999988777766554  45788999999999999999998876 78


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ....+.+.+.+++++.+++|+.+++.+++.++|++.+++.+++|++||..+..+.+....|+.+|+
T Consensus        80 ~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         80 GINVLINNAGVN--HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             CCCEEEECCCCC--CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence            999999999976  445677889999999999999999999999999998777789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||+|+.++||+++|++........    .           .....+..+|+|+|+.++++++..
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~----~-----------~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL----N-----------RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc----c-----------ccccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999998754321100    0           001135678999999999999765

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-33  Score=245.40  Aligned_cols=247  Identities=21%  Similarity=0.281  Sum_probs=198.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.+.+++..++.     +.+++++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            5789999999999999999999999999999999988776665443     2468889999999999999 898888889


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ......+.+.+++++.+++|+.+++.+++.++|.+++.+.+++|++||..+..+.+++..|+.+|+
T Consensus        81 ~id~vv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         81 RIDLLVNNAGYA--NGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CeeEEEECCccc--ccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence            999999999987  445577788999999999999999999999999998777789999999999989889999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh----cCCC-HHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY----AGVD-ASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +++.++++++.++.++||+++.++||+++|+++........    .... ...............+++++|+|+|+++.+
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999997643211000    0000 011111111111122678899999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++++..   +.++++++|....
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~~  258 (280)
T PRK06914        239 IAESKRP---KLRYPIGKGVKLM  258 (280)
T ss_pred             HHcCCCC---CcccccCCchHHH
Confidence            9987633   2467776655543

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1e-32  Score=238.23  Aligned_cols=240  Identities=25%  Similarity=0.315  Sum_probs=195.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..++++++||||+++||++++++|+++|++|++++|+. +..+.....+    ...+.++.+|+++.+++.++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35779999999999999999999999999999999864 3344433322    245788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|++|||||..  ...++.+.+.+++++++++|+.+++.+++++.|.+.++ .+.++++++..+..+.++...|+.+
T Consensus        83 ~~~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         83 FGRLDALVNNASSF--YPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHH
Confidence            99999999999986  34456677889999999999999999999999988654 4788888887777788888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+ ++++++++||+++|++....+       .... ........+ .....+++|+|+++++++.
T Consensus       160 K~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-------~~~~-~~~~~~~~~-~~~~~~~~d~a~~~~~~~~  229 (249)
T PRK09135        160 KAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-------DEEA-RQAILARTP-LKRIGTPEDIAEAVRFLLA  229 (249)
T ss_pred             HHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-------CHHH-HHHHHhcCC-cCCCcCHHHHHHHHHHHcC
Confidence            99999999999999865 699999999999999753221       1111 111112222 2567789999999988886


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      + ..+.+|+++++|+|...
T Consensus       230 ~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        230 D-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             c-cccccCcEEEECCCeec
Confidence            5 35689999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=245.14  Aligned_cols=223  Identities=29%  Similarity=0.433  Sum_probs=190.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|+++++++.++++.+.++++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999988777665544   457888999999999999999999999999999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      +|||||..  ..+.+.+.+.++|++++++|+.+++.+++.++|.+.+.+.+++|++||..+..+.+....|+.+|+++++
T Consensus        81 lI~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVA--SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCC--CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            99999987  4556778899999999999999999999999999987777899999999999998999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++++++.|+.+.||+++.|+||+++|++.......     . ..........  ..+..++|+|+|+.++..+..+
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~-~~~~~~~~~~--~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP-----N-PAMKAQVGKL--LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccC-----c-hhHHHHHHHH--hhcCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999976543211     0 1101111100  1144579999999999999764

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3e-33  Score=269.71  Aligned_cols=233  Identities=28%  Similarity=0.409  Sum_probs=194.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++++++||||++|||++++++|+++|++|++++|+.+.+++..+.+   +.++.++.+|++|+++++++++++.+++
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4578899999999999999999999999999999999988777665544   4578899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +++|++|||||..  ..+.+.+.+.+++++++++|+.+++.++++++|.|.+++ .|++|++||.++..+.++...|++|
T Consensus       391 g~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        391 GVPDIVVNNAGIG--MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             CCCcEEEECCccC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            9999999999987  455677889999999999999999999999999998765 5899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH-HHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL-VYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.+++.++.|+.++||+|++|+||+|+|++......   .....+..... .........+..+|||+|+.+++++
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~  545 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRF---AGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAV  545 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcccc---CCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998764311   11111100000 0001111134568999999999999


Q ss_pred             cCC
Q 022418          265 SDD  267 (297)
Q Consensus       265 ~~~  267 (297)
                      ..+
T Consensus       546 ~~~  548 (582)
T PRK05855        546 KRN  548 (582)
T ss_pred             HcC
Confidence            765

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=237.14  Aligned_cols=219  Identities=26%  Similarity=0.410  Sum_probs=191.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578899999999999999999999999999999999987766655444   4578889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|..  ....+.+.+++++++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+.+....|+.+|
T Consensus        83 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         83 GSIDILINNAGIS--KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             CCccEEEEcCccc--cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence            9999999999986  44557778999999999999999999999999999887788999999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++.+.||+++.|+||+++|++.......                .. ....+++++|+|+.+..+++.
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----------------~~-~~~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT----------------DG-NPDKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc----------------cc-CCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999976432100                00 114568999999999999976


Q ss_pred             C
Q 022418          267 D  267 (297)
Q Consensus       267 ~  267 (297)
                      .
T Consensus       224 ~  224 (239)
T PRK07666        224 N  224 (239)
T ss_pred             C
Confidence            4

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=2.2e-32  Score=236.88  Aligned_cols=239  Identities=36%  Similarity=0.539  Sum_probs=198.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHhC----CCeeEEEecCCC-HHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL--GQQTAKELG----PNATFIACDVTK-ESDVSDAVDFTI  103 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~----~~v~~~~~D~s~-~~~i~~~~~~~~  103 (297)
                      ++.+|+++||||++|||+++|+.|+++|++|+++.|+.+.  .+...+...    ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999888887664  333333333    467888899998 999999999999


Q ss_pred             HHcCCccEEEECccCCCCCC-CccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC-Ccc
Q 022418          104 SKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHT  181 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~-~~~  181 (297)
                      +.+|++|++|||||..  .. ..+.+.+.++|++++++|+.+++.+.+++.|.++++   +||++||..+. +.++ +.+
T Consensus        82 ~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~  155 (251)
T COG1028          82 EEFGRIDILVNNAGIA--GPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAA  155 (251)
T ss_pred             HHcCCCCEEEECCCCC--CCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcch
Confidence            9999999999999987  33 368888899999999999999999999888888733   99999999998 7777 489


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.||+|++.|++.++.|+.++||+|++|+||+++|++........     ... ........ +.+++..|++++..+.
T Consensus       156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-----~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  228 (251)
T COG1028         156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-----LEA-LKRLAARI-PLGRLGTPEEVAAAVA  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-----hhH-HHHHHhcC-CCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999887543321     000 11111111 2247888999999999


Q ss_pred             HHhcCC-CCcccccEEEecCCc
Q 022418          262 YLASDD-AKYVSGHNLVVDGGF  282 (297)
Q Consensus       262 ~l~~~~-~~~~tG~~i~vdgG~  282 (297)
                      ++.+.. ..+.+|+.+.+|||.
T Consensus       229 ~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         229 FLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHcCcchhccccCCEEEeCCCC
Confidence            998663 678999999999986

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-33  Score=243.71  Aligned_cols=225  Identities=28%  Similarity=0.358  Sum_probs=187.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..+.     ..+++++++|++|+++++++++.+.++++++|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----IPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999999999999998765432     2457889999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ..+.+.+.+.+++++++++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+.+|++++.+
T Consensus        78 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         78 VNNAGVG--LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EECCCCC--CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            9999987  45667788999999999999999999999999999888889999999999988888889999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCH--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDA--SRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++.++.|+.+.||+++.|+||+++|++.........  ..+..  ........  ... .+..+|+++|+.+++++++.
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA--KAV-KKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH--hcc-ccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999997654321100  00000  00011111  112 45678999999999999765

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1e-32  Score=243.74  Aligned_cols=234  Identities=26%  Similarity=0.393  Sum_probs=188.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|.++++++++.+.++++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999987777666554   45688899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC------ceEEEEecccccccCCCCcc
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS------GCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------g~iv~vss~~~~~~~~~~~~  181 (297)
                      ++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.++..      +++|++||..+..+.+....
T Consensus        83 ~id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         83 AVHLLFNNAGVG--AGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCEEEECCCCC--CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            999999999987  4456778899999999999999999999999999876543      79999999999988888899


Q ss_pred             chhhHHHHHHHHHHHHHHHcc--CCcEEEEEeCCCccCcchhhHHHH--hhcC----CCHHHHHHHHHhcCCCCCCCCCH
Q 022418          182 YSVSKSAIIGLVKSMAAELCE--YGIRINCISPFAIPTPFVMEEMSQ--IYAG----VDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~--~~i~v~~v~pG~v~t~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                      |+++|++++.+++.++.++..  .+|+++++.||+++|++......+  ...+    ................ ...+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~  239 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG-SGKVTA  239 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh-ccCCCH
Confidence            999999999999999999874  469999999999999987543211  0000    0000000000000001 223799


Q ss_pred             HHHHHHHHHHhcCC
Q 022418          254 NDIANAALYLASDD  267 (297)
Q Consensus       254 ~dia~~~~~l~~~~  267 (297)
                      +|+|+.+..++.+.
T Consensus       240 ~dva~~i~~~~~~~  253 (287)
T PRK06194        240 EEVAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999988554

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-32  Score=239.84  Aligned_cols=231  Identities=20%  Similarity=0.261  Sum_probs=189.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +..+|+++||||+++||++++++|+++|++|++++|+.+.+++..+.+   +.++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            467789999999999999999999999999999999887666554433   45688899999999999999999998889


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||..  ......+.+.+++++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.+....|+.+|+
T Consensus        87 ~id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         87 EIEVLVSGAGDT--YFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             CCCEEEECCCcC--CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence            999999999976  445566788999999999999999999999999987777789999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||++++++||+++|++.........    ...............+++++++|+|++++++++..
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVI----GPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhh----hHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            99999999999998889999999999999986432111100    00111111101111256899999999999999764

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=241.15  Aligned_cols=246  Identities=20%  Similarity=0.259  Sum_probs=200.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .|+++||||+|+||++++++|+++|++|++++|+.+..++..+..+.++.++.+|++|.+++.++++++.+.++++|++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999998877777666666788999999999999999999988889999999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      ||||..  ......+.+.+++++.+++|+.+++.++++++|++++++.+++|++||..+..+.++...|+.||++++.++
T Consensus        82 ~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  159 (276)
T PRK06482         82 SNAGYG--LFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFV  159 (276)
T ss_pred             ECCCCC--CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHH
Confidence            999987  455567788999999999999999999999999998777789999999998888888899999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcCCC---HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAGVD---ASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      ++++.++.++||+++.++||++.|++........ .....   ...+...... ... ....+|+|++++++..+...  
T Consensus       160 ~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~~~~~~a~~~~~~~~--  235 (276)
T PRK06482        160 EAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSF-AIPGDPQKMVQAMIASADQT--  235 (276)
T ss_pred             HHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccC-CCCCCHHHHHHHHHHHHcCC--
Confidence            9999999999999999999999998754321110 00011   1112111111 111 23478999999999998644  


Q ss_pred             cccccEEEecCCccccc
Q 022418          270 YVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~  286 (297)
                       ..+..+++.+|.....
T Consensus       236 -~~~~~~~~g~~~~~~~  251 (276)
T PRK06482        236 -PAPRRLTLGSDAYASI  251 (276)
T ss_pred             -CCCeEEecChHHHHHH
Confidence             2356788877765543

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=241.06  Aligned_cols=234  Identities=22%  Similarity=0.224  Sum_probs=186.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ ..+....++   +.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            477899999999999999999999999999999999764 344333332   4567889999999999999999999888


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-----ccCCCCcc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-----LGGLAQHT  181 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-----~~~~~~~~  181 (297)
                      +++|++|||||...  ..   +.   ++...+++|+.+++.+++.+.|.|.+  .+++|++||..+.     .+.+.+..
T Consensus        83 ~~~d~vi~~ag~~~--~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~  152 (248)
T PRK07806         83 GGLDALVLNASGGM--ES---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEP  152 (248)
T ss_pred             CCCcEEEECCCCCC--CC---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccH
Confidence            99999999998652  11   11   24678899999999999999998853  4799999996553     22344678


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.+|++++.+++.++.++.+.||+|++|.||++.|++......+.    .......   ...+ .+++++|+|+|+++.
T Consensus       153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~----~~~~~~~---~~~~-~~~~~~~~dva~~~~  224 (248)
T PRK07806        153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL----NPGAIEA---RREA-AGKLYTVSEFAAEVA  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC----CHHHHHH---HHhh-hcccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998765433211    1111111   1112 378999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++++  ..+.+|++++++||..+
T Consensus       225 ~l~~--~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        225 RAVT--APVPSGHIEYVGGADYF  245 (248)
T ss_pred             HHhh--ccccCccEEEecCccce
Confidence            9997  35789999999999754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=240.06  Aligned_cols=211  Identities=19%  Similarity=0.271  Sum_probs=177.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchh-HHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQL-GQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~-~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++   + .+++++.+|++|++++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 899999999875 66555544   2 3688999999999999999999876 5


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||+|.......  ...+.++..+.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+.||
T Consensus        86 g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEE--LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCchhh--cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            899999999998632111  112355566889999999999999999999988889999999999887777888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|+++++.|+.++||+|++|+||+++|++.....                    .. ....+|+|+|+.++..+.+
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~--------------------~~-~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK--------------------EA-PLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC--------------------CC-CCCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999998764210                    00 2246899999999999976


Q ss_pred             C
Q 022418          267 D  267 (297)
Q Consensus       267 ~  267 (297)
                      +
T Consensus       223 ~  223 (253)
T PRK07904        223 G  223 (253)
T ss_pred             C
Confidence            5

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=239.29  Aligned_cols=219  Identities=30%  Similarity=0.364  Sum_probs=188.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHH-cCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISK-HNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~-~g~id~l  112 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+.. +.+++++.+|++|.+++.++++.+.++ ++++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            78999999999999999999999999999999998888776665 357889999999999999999988776 7899999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ..+.+.+.+.+++++++++|+.+++.+++++.+.|+.++.+++|++||..+..+.+....|+.||++++.+
T Consensus        82 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         82 FNNAGIL--RGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            9999987  45567788999999999999999999999999999877789999999999999988889999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++.++.++.+.||++++|+||+++|++.....        .+........    .+...+|+|+|++++.++...
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--------~~~~~~~~~~----~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--------NEVDAGSTKR----LGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCccccccc--------chhhhhhHhh----ccCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999865310        0000000001    133468999999999998543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=2.6e-32  Score=244.29  Aligned_cols=239  Identities=19%  Similarity=0.154  Sum_probs=186.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+|+++||||++|||++++++|+++| ++|++++|+.++.++..+++   +.++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999988877766655   245778899999999999999999888899


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEeccccccc-----------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLG-----------  175 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~-----------  175 (297)
                      +|++|||||+.. ......+.+.++|++++++|+.+++.+++.++|.|++.+  .++||++||..+..+           
T Consensus        82 iD~lI~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        82 LDALVCNAAVYF-PTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCEEEECCCccc-cCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            999999999753 222234568899999999999999999999999997653  589999999876421           


Q ss_pred             ----------------------CCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCc-cCcchhhHHHHhhcCC
Q 022418          176 ----------------------GLAQHTYSVSKSAIIGLVKSMAAELC-EYGIRINCISPFAI-PTPFVMEEMSQIYAGV  231 (297)
Q Consensus       176 ----------------------~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~  231 (297)
                                            ..++.+|+.||+++..+++.+++++. +.||+|++|+||.| +|++.+......    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~----  236 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLF----  236 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHH----
Confidence                                  12456799999999999999999985 46899999999999 698865321110    


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 022418          232 DASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                       ...+.......   .+.+.+|++.|+.+++++.+.....+|..+..++
T Consensus       237 -~~~~~~~~~~~---~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       237 -RTLFPPFQKYI---TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             -HHHHHHHHHHH---hccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence             00000000000   1345789999999999887654445676665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=245.37  Aligned_cols=245  Identities=19%  Similarity=0.215  Sum_probs=186.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ...+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++.+|++|.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988777666554     246888999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------  175 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------  175 (297)
                      .+.++++|+||||||...  . ...+.+.++++.++++|+.+++.+++.++|.|++. .+++|++||..+..+       
T Consensus        88 ~~~~~~iD~li~nAG~~~--~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~  163 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMT--P-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDL  163 (313)
T ss_pred             HHhCCCccEEEECCcccc--C-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccc
Confidence            999999999999999863  2 23356788999999999999999999999999754 589999999887543       


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          176 -----GLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       176 -----~~~~~~Y~~sK~a~~~~~~~la~el--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                           .+++..|+.||+++..|++.++.++  ...||+||+++||+++|++...... .... .................
T Consensus       164 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~  241 (313)
T PRK05854        164 NWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPE-VGRD-KDTLMVRLIRSLSARGF  241 (313)
T ss_pred             cccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccc-cccc-hhHHHHHHHHHHhhccc
Confidence                 2456689999999999999998864  3568999999999999998643110 0000 00111111110000001


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEec
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVD  279 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vd  279 (297)
                      .+-++++-|...++++..... .+|..+.-+
T Consensus       242 ~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        242 LVGTVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             ccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            234788889988888765422 356665443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=8.8e-32  Score=231.06  Aligned_cols=234  Identities=36%  Similarity=0.559  Sum_probs=196.4

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|||++++||.+++++|+++|++|++++|+. +.++...+.+   +.+++++.+|++|+++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 3333333322   4568899999999999999999999888999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      ||++|..  ....+.+.+.+.+++.+++|+.+++.+++.+.+.+.+.+.++++++||..+..+.+.+..|+.+|++++.+
T Consensus        81 i~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGIT--RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            9999986  33446677889999999999999999999999998766678999999999988888899999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS  272 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~t  272 (297)
                      ++.++.++...|++++.++||+++|++.....        . ..........+. +++.+++|+|+.+++++.+...+.+
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~--------~-~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~  228 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKLS--------E-KVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYIT  228 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhcC--------h-HHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCcccCCcC
Confidence            99999999888999999999999998653221        1 111111122223 6788999999999999987777899


Q ss_pred             ccEEEecCCc
Q 022418          273 GHNLVVDGGF  282 (297)
Q Consensus       273 G~~i~vdgG~  282 (297)
                      |+.+++|+|+
T Consensus       229 g~~~~~~~g~  238 (239)
T TIGR01830       229 GQVIHVDGGM  238 (239)
T ss_pred             CCEEEeCCCc
Confidence            9999999986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-32  Score=234.03  Aligned_cols=211  Identities=20%  Similarity=0.251  Sum_probs=184.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++....+     +.+++++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988777665443     346888999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC-CccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~-~~~Y~~sK~  187 (297)
                      +|++|||||+.  ....+.+.+.+.+++.+++|+.+++.+++.++|.+++.+.+++|++||..+..+.+. +..|+.||+
T Consensus        82 id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIG--KGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcC--CCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            99999999987  445566778899999999999999999999999998777889999999988887764 678999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.||+++.|+||+++|++......                     ....++++|.|+.++..++.+
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---------------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS---------------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc---------------------CCccCCHHHHHHHHHHHHhcC
Confidence            99999999999999889999999999999987643210                     133578999999999988764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.5e-32  Score=231.68  Aligned_cols=234  Identities=24%  Similarity=0.358  Sum_probs=194.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |++++|+++||||+++||.++++.|+++|++|++++|+.+..+...+...  .+++++.+|+++++++.++++++...++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999999887766644442  3678899999999999999999988889


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~~~~~Y~~sK  186 (297)
                      ++|.+|+++|...  ....  .+.+.++.++++|+.+++.+++.+.|.+.+  .+++|++||..+.. +.+....|+.+|
T Consensus        81 ~id~ii~~ag~~~--~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         81 AIDGLVVTVGGYV--EDTV--EEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             CCCEEEEcCCCcC--CCch--HHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHH
Confidence            9999999999752  2222  234889999999999999999999998853  48899999987753 556677899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.++...||+++.|+||+++|++.....           ...    .........+++|+++.+.+++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-----------~~~----~~~~~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN-----------WKK----LRKLGDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-----------hhh----hccccCCCCCHHHHHHHHHHHhcc
Confidence            99999999999999988999999999999998643210           000    001113467899999999999998


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...+++|+.+.+|||.-+
T Consensus       220 ~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        220 EADWVDGVVIPVDGGARL  237 (238)
T ss_pred             cccCccCCEEEECCcccc
Confidence            888999999999998754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.4e-31  Score=218.87  Aligned_cols=246  Identities=24%  Similarity=0.257  Sum_probs=208.8

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC---CCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..++||+.||+|-.  +.|++.||+.+.++|+++..++.++ ++++..+++.   .....++||+++.+++.++++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999987  5999999999999999999988876 4444444441   1245789999999999999999999


Q ss_pred             HcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          105 KHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++|++|.+||+-++.+.  -.+.+.|.+.+.|...+++..++...+.+++.|.|.  +.|.++..+=..+..-.|.+-..
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs~r~vPnYNvM  158 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVM  158 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccceeecCCCchh
Confidence            99999999999999852  345788899999999999999999999999999994  47899999988888888888889


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.+|+++|.-+|.+|.+++++|||||.|+-||+.|=-.....       ....+........|+ ++.+++|||++...|
T Consensus       159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~-------~f~~~l~~~e~~aPl-~r~vt~eeVG~tA~f  230 (259)
T COG0623         159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIG-------DFRKMLKENEANAPL-RRNVTIEEVGNTAAF  230 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccc-------cHHHHHHHHHhhCCc-cCCCCHHHhhhhHHH
Confidence            999999999999999999999999999999999983222111       123333444445556 899999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      |+++-.+-+||+++-||+|+..+.
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HhcchhcccccceEEEcCCceeec
Confidence            999999999999999999998764

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=242.81  Aligned_cols=238  Identities=22%  Similarity=0.191  Sum_probs=187.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999987766554443     2467889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---------
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---------  174 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---------  174 (297)
                      +.++++|++|||||...  .  ..+.+.++++..+++|+.+++.+++.++|.+++.+.+++|++||..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~--~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMY--T--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCcccc--C--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            99999999999999763  2  1245667889999999999999999999999877778999999987543         


Q ss_pred             ----cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEE--eCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          175 ----GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI--SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       175 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                          +.++...|+.||++++.|++.++.++.+.|++|+++  +||+|+|++.+.....         .........+  .
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~---------~~~~~~~~~~--~  235 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA---------LRPVATVLAP--L  235 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH---------HHHHHHHHHh--h
Confidence                233456899999999999999999998888777655  6999999987543111         0011111110  1


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ...++++-+...++++.+. ...+|..+..||+.
T Consensus       236 ~~~~~~~g~~~~~~~~~~~-~~~~g~~~~~~~~~  268 (306)
T PRK06197        236 LAQSPEMGALPTLRAATDP-AVRGGQYYGPDGFG  268 (306)
T ss_pred             hcCCHHHHHHHHHHHhcCC-CcCCCeEEccCccc
Confidence            1235777777777776644 55688888877754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=234.24  Aligned_cols=227  Identities=22%  Similarity=0.285  Sum_probs=184.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+..+....   ..+.++.+|++++++++++++.+.+.++++|++||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            799999999999999999999999999999999876665433   24678899999999999999999999999999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||..  ..+.+.+.+.+++++.+++|+.+++.++++++|.+.+ ..+++|++||..+..+.+....|+.+|++++.+++
T Consensus        79 ~ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~  155 (274)
T PRK05693         79 NAGYG--AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD  155 (274)
T ss_pred             CCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            99976  4556778899999999999999999999999999864 35899999999998888888999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHh--hcCCCHHH---HHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQI--YAGVDASR---LLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|+.++||+|+.++||+++|++........  ......+.   ................+|+++|+.++..+...
T Consensus       156 ~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        156 ALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             HHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999865432110  00000000   00110100001133468999999999988754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=4.9e-32  Score=232.12  Aligned_cols=196  Identities=25%  Similarity=0.290  Sum_probs=179.0

Q ss_pred             CCCCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           24 GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        24 ~~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .......+..+|.|+|||+-+|+|+.+|++|.++|+.|++.+-+++..+++..+. +++...++.|++++++++++.+.+
T Consensus        19 ~~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V   98 (322)
T KOG1610|consen   19 LERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWV   98 (322)
T ss_pred             HhhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHH
Confidence            3444556789999999999999999999999999999999999998888888888 889999999999999999999999


Q ss_pred             HHHcC--CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          103 ISKHN--QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       103 ~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .+..+  ++-.||||||+.. ..++.+-++.+++++++++|..|++.+++.++|++++. .||+|++||..+..+.|..+
T Consensus        99 ~~~l~~~gLwglVNNAGi~~-~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g  176 (322)
T KOG1610|consen   99 KKHLGEDGLWGLVNNAGISG-FLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALG  176 (322)
T ss_pred             HHhcccccceeEEecccccc-ccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccc
Confidence            88653  6899999999775 44556667899999999999999999999999999754 69999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM  221 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~  221 (297)
                      +||+||+|++.|+-++++|+.++||+|.+|.||.+.|++..
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99999999999999999999999999999999999999885

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=225.04  Aligned_cols=198  Identities=19%  Similarity=0.216  Sum_probs=170.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++ ++|++++|+.+              .+++|++|++++++++++    ++++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~----~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRALFEK----VGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHHHHh----cCCCCEEEE
Confidence            47999999999999999999999 99999999753              368999999999988875    478999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||..  ...++.+.+.++|++.+++|+.+++.+++.+.|+|.+  .++++++||..+..+.+.+..|+++|++++.|++
T Consensus        62 ~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  137 (199)
T PRK07578         62 AAGKV--HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFVK  137 (199)
T ss_pred             CCCCC--CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHH
Confidence            99976  4556778899999999999999999999999999964  4789999999998888889999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH  274 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~  274 (297)
                      +++.|+ ++||+|++|+||+++|++....  +..                 +....++|+|+|+.+.++++.   ..+|+
T Consensus       138 ~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--~~~-----------------~~~~~~~~~~~a~~~~~~~~~---~~~g~  194 (199)
T PRK07578        138 AAALEL-PRGIRINVVSPTVLTESLEKYG--PFF-----------------PGFEPVPAARVALAYVRSVEG---AQTGE  194 (199)
T ss_pred             HHHHHc-cCCeEEEEEcCCcccCchhhhh--hcC-----------------CCCCCCCHHHHHHHHHHHhcc---ceeeE
Confidence            999999 8899999999999999863210  000                 113457899999999999964   47999


Q ss_pred             EEEe
Q 022418          275 NLVV  278 (297)
Q Consensus       275 ~i~v  278 (297)
                      ++.+
T Consensus       195 ~~~~  198 (199)
T PRK07578        195 VYKV  198 (199)
T ss_pred             Eecc
Confidence            8875

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=232.33  Aligned_cols=222  Identities=27%  Similarity=0.402  Sum_probs=186.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++++||||+|+||+++++.|+++|++|++++|+.+..++..+++   +.++.++.+|++|++++.++++.+.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987766555443   45688899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCC-CHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDL-NLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      ++|||+|..  ....+.+. +.+++++.+++|+.+++.+++.+.+.+.+. .+++|++||..+..+.+++..|+.+|+++
T Consensus        81 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGIT--MWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcc--cccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            999999986  44556677 899999999999999999999999988654 58999999999988888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +.+++.++.++.+.+|+++++.||+++|++........     ...   . ........++++|+|+|+.+.++++..
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~-----~~~---~-~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGD-----GKP---L-GKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccc-----ccc---c-ccccccccCCCCHHHHHHHHHHHhhCC
Confidence            99999999999999999999999999999875432110     000   0 000001146889999999999999754

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-31  Score=227.76  Aligned_cols=208  Identities=20%  Similarity=0.267  Sum_probs=181.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++    +.+++++++|++++++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            78999999999999999999999999999999988776655443    45788999999999999999988754   469


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||+|..  ......+.+.+++.+.+++|+.+++++++++.|.|.+++.+++|++||..+..+.+....|+.+|++++
T Consensus        79 ~vv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         79 IVLIAVGTL--GDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             EEEECCcCC--CCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            999999976  344567788999999999999999999999999998777899999999999888888889999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      .+++.++.++.+.||+|++|+||+++|++.....                    .+.....+|+|+|+.++.+++.+
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--------------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--------------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC--------------------CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998653210                    01134578999999999999765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.2e-31  Score=217.42  Aligned_cols=221  Identities=20%  Similarity=0.234  Sum_probs=183.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHC-CCeEE-EEeCCchhHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHH--c
Q 022418           34 EKVALITGAASGIGKATAAKFISN-GAKVV-IADIQHQLGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISK--H  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~-G~~Vi-~~~r~~~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~--~  106 (297)
                      .|.++||||++|||..++++|.+. |..++ .++|+.++..+..+.   .+.++|.++.|+++.+++.++++++.+-  .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            466999999999999999999974 66654 456667764322222   2689999999999999999999999886  4


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-----------CceEEEEeccccccc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-----------SGCILCTASVTGLLG  175 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~g~iv~vss~~~~~~  175 (297)
                      .++|++|||||+.. ........+.+.|.+++++|..++..++|+|+|++++..           +..||++||..+..+
T Consensus        83 ~GlnlLinNaGi~~-~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   83 DGLNLLINNAGIAL-SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             CCceEEEeccceee-ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            58999999999985 334455667899999999999999999999999997643           348999999887644


Q ss_pred             C---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCC
Q 022418          176 G---LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE  252 (297)
Q Consensus       176 ~---~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (297)
                      .   .++.+|..||+|++.|+|.++.|+++.+|-|.+++||+|.|+|...                         ...++
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-------------------------~a~lt  216 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-------------------------KAALT  216 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-------------------------Ccccc
Confidence            3   3467999999999999999999999999999999999999998652                         44578


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecC
Q 022418          253 PNDIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                      |||.+..++.....-....+|..++.||
T Consensus       217 veeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  217 VEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             hhhhHHHHHHHHHhcCcccCcceEccCC
Confidence            9999998888888777778888888776

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-31  Score=227.38  Aligned_cols=225  Identities=18%  Similarity=0.181  Sum_probs=179.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHH-HHHHc---CCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDF-TISKH---NQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~-~~~~~---g~id  110 (297)
                      ++++||||+||||++++++|+++|++|++++|+.+..  .....+.++.++++|+++.+++++++++ +.+.+   +++|
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            5799999999999999999999999999999986532  2233355788999999999999998776 54444   4799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||+|... ....+.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+++..|+.+|++++
T Consensus        80 ~~v~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (243)
T PRK07023         80 LLINNAGTVE-PIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALD  158 (243)
T ss_pred             EEEEcCcccC-CCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHH
Confidence            9999999763 234566788999999999999999999999999998777789999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH-HHHHHhcCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN-AALYLASDD  267 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~-~~~~l~~~~  267 (297)
                      .+++.++.+ .+.||++++|+||+++|++...........  .... ....... +.+++++|+|+|+ .+.+|+++.
T Consensus       159 ~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~-~~~~~~~-~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        159 HHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEER--FPMR-ERFRELK-ASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhccccc--chHH-HHHHHhh-hcCCCCCHHHHHHHHHHHHhccc
Confidence            999999999 778999999999999999765321110000  0111 1111112 2377889999999 566776655

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.1e-30  Score=234.60  Aligned_cols=239  Identities=18%  Similarity=0.132  Sum_probs=184.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++   +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999988877776665   3468889999999999999999988777


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC--ceEEEEecccccc----------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS--GCILCTASVTGLL----------  174 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--g~iv~vss~~~~~----------  174 (297)
                      +++|+||||||+.. ......+.+.++++..+++|+.+++.++++++|.|++.+.  ++||++||.....          
T Consensus        82 ~~iD~li~nAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYM-PLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccC-CCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            89999999999763 2122346788999999999999999999999999976643  6999999975421          


Q ss_pred             -------------------------cCCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCc-cCcchhhHHHHh
Q 022418          175 -------------------------GGLAQHTYSVSKSAIIGLVKSMAAELC-EYGIRINCISPFAI-PTPFVMEEMSQI  227 (297)
Q Consensus       175 -------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~pG~v-~t~~~~~~~~~~  227 (297)
                                               +..+..+|+.||.+.+.+++.+++++. ..||+|++++||.| .|++.+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-  239 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPL-  239 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHH-
Confidence                                     112346899999999999999999985 46899999999999 58765432110 


Q ss_pred             hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEE
Q 022418          228 YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLV  277 (297)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~  277 (297)
                           ...+.......  ......++++.++.+++++.+.....+|..+.
T Consensus       240 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        240 -----FQKLFPWFQKN--ITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             -----HHHHHHHHHHH--HhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence                 00111111110  01234678888888888876654445777665

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-31  Score=224.55  Aligned_cols=223  Identities=30%  Similarity=0.414  Sum_probs=190.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++.+++++||||+|+||++++++|+++|++|++++|+.+.+++..+.+.  .+++++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999999887777666553  5688999999999999999999999889


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++||++|..  ..+.+.+.+.+++++.+++|+.+++.+++++++.+ +++.+++|++||..+..+......|+.+|+
T Consensus        82 ~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         82 GLDVLIANAGVG--HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             CCCEEEECCCCC--CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHH
Confidence            999999999976  44557788999999999999999999999999988 345689999999988888788889999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.++.+.|++++.|+||++.|++......        ..           ....++++|+++.+++++..+
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~--------~~-----------~~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS--------EK-----------DAWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc--------hh-----------hhccCCHHHHHHHHHHHHhCC
Confidence            99999999999999899999999999999986532110        00           012368999999999999887


Q ss_pred             CCccccc
Q 022418          268 AKYVSGH  274 (297)
Q Consensus       268 ~~~~tG~  274 (297)
                      ...+.++
T Consensus       220 ~~~~~~~  226 (237)
T PRK07326        220 PRTLPSK  226 (237)
T ss_pred             ccccccc
Confidence            6544443

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=255.82  Aligned_cols=216  Identities=27%  Similarity=0.351  Sum_probs=186.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|.++++++++++.++++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999999998877766554   45788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCC--CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          108 QLDIMYNNAGVACKTPRSIVD--LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++|++|||||...  ...+.+  ...+++++++++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+++
T Consensus       448 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        448 HVDYLVNNAGRSI--RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             CCCEEEECCCCCC--CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence            9999999999762  222222  236889999999999999999999999988888999999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|+++++.|+.+.||+|++|+||+|+|++......               .    ......+||++|+.++..+.
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------------~----~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------------Y----NNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------------c----cCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998642100               0    01335789999999998775


Q ss_pred             CC
Q 022418          266 DD  267 (297)
Q Consensus       266 ~~  267 (297)
                      +.
T Consensus       587 ~~  588 (657)
T PRK07201        587 EK  588 (657)
T ss_pred             hC
Confidence            44

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-30  Score=224.17  Aligned_cols=205  Identities=20%  Similarity=0.212  Sum_probs=174.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      ++++||||++|||++++++|+++|++|++++|+.+.+++..+. ..++.++++|++|+++++++++++.   ..+|.+||
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLP---FIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcc---cCCCEEEE
Confidence            7899999999999999999999999999999998877666543 3468889999999999999988763   25799999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||..  ......+.+.++|++++++|+.+++++++++.|.|.+  .+++|++||..+..+.+.+..|+++|++++.+++
T Consensus        78 ~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         78 NAGDC--EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             cCccc--ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHH
Confidence            99965  2223445788999999999999999999999999853  4689999999999988888999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      .++.|+.++||++++++||+++|++.....      .              ......+|+|+|+.++..++.+
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------~--------------~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDKNT------F--------------AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCCCC------C--------------CCCcccCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999754210      0              0023468999999999888664

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=5.2e-30  Score=220.31  Aligned_cols=206  Identities=28%  Similarity=0.346  Sum_probs=176.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      |++++|+++||||+|+||++++++|+++|+ +|++++|+.++.++    .+.++.++.+|++|++++.++++.    .++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~----~~~   73 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA----ASD   73 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh----cCC
Confidence            678899999999999999999999999999 99999999876544    446788999999999999887765    468


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++||++|... ....+.+.+.+++.+.+++|+.+++.+.+++.|.+++.+.+++|++||..+..+.++...|+.+|++
T Consensus        74 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a  152 (238)
T PRK08264         74 VTILVNNAGIFR-TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAA  152 (238)
T ss_pred             CCEEEECCCcCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHH
Confidence            999999999832 4556778899999999999999999999999999987778899999999998888888899999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++.+++.++.++.+.|++++.++||.++|++.....                       +...+++++++.++..+...
T Consensus       153 ~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------------------~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        153 AWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-----------------------APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC-----------------------cCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999998753211                       22456777777777666543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=5.4e-31  Score=225.64  Aligned_cols=190  Identities=24%  Similarity=0.324  Sum_probs=171.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      --|+|++|||||.|||++.|++||++|.+|++++|++++++..++++    +.++.++.+|+++.+++.+-+.+..+. .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-L  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-C
Confidence            34589999999999999999999999999999999999999988877    567899999999988743333333322 2


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      .+.+||||+|...+.+..+.+.+.+.+++.+++|..+...+++.++|.|.++++|-||+++|.++..|.|.++.|+++|+
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            68899999999976688888899889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME  222 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~  222 (297)
                      +++.|+++++.|+.++||.|.++.|+.|.|+|...
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            99999999999999999999999999999998764

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.9e-31  Score=217.78  Aligned_cols=242  Identities=17%  Similarity=0.168  Sum_probs=192.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE--eCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~--~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ..+|++|+||+|+|||..++..+.+++...+..  .|.....+..+...++.......|++...-+.++.+..++++++.
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            356899999999999999999998888765444  444333333333334455566789998888899999999999999


Q ss_pred             cEEEECccCCCCCCCcc-CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          110 DIMYNNAGVACKTPRSI-VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      |++|||||..++..+.. +.-+.++|++.++.|+++.+.+.+.++|.+++++ .+.+|++||.++..|...|++||++|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            99999999986433322 2567899999999999999999999999998874 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      |.++|++.+|.|-. .+++|.++.||.+||+|........  ...+.... ....-... +++++|...|+.+.+|+...
T Consensus       164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~--~~~p~~l~-~f~el~~~-~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS--RMTPADLK-MFKELKES-GQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc--CCCHHHHH-HHHHHHhc-CCcCChhhHHHHHHHHHHhc
Confidence            99999999999865 6899999999999999987765443  12222221 11111112 78899999999999999876


Q ss_pred             CCcccccEEEec
Q 022418          268 AKYVSGHNLVVD  279 (297)
Q Consensus       268 ~~~~tG~~i~vd  279 (297)
                      . +.+|+++...
T Consensus       239 ~-f~sG~~vdy~  249 (253)
T KOG1204|consen  239 D-FVSGQHVDYY  249 (253)
T ss_pred             C-cccccccccc
Confidence            5 8999998764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.7e-30  Score=227.50  Aligned_cols=232  Identities=24%  Similarity=0.252  Sum_probs=185.2

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ....++++++++|||+++|||+++|+.|+.+|++|++.+|+.+..++.++.+     ..++.++++|+++.+++.++.++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            4556899999999999999999999999999999999999998888877766     34678899999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------  175 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------  175 (297)
                      +...++++|++|||||+..++.    ..+.|.++.++.+|+.|++.+++.++|.++....+|||++||..+...      
T Consensus       108 ~~~~~~~ldvLInNAGV~~~~~----~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  108 FKKKEGPLDVLINNAGVMAPPF----SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHhcCCCccEEEeCcccccCCc----ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            9999999999999999985332    567789999999999999999999999998777799999999886110      


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          176 -------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       176 -------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                             .....+|+.||.++..+++.+++++.+ ||.+++++||.|.|+..... ...     ...+.....      .
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~-~~~-----~~~l~~~l~------~  250 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV-NLL-----LRLLAKKLS------W  250 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc-hHH-----HHHHHHHHH------H
Confidence                   222235999999999999999999988 99999999999999933221 000     000001000      1


Q ss_pred             CC-CCHHHHHHHHHHHhcCC-CCcccccE
Q 022418          249 TH-CEPNDIANAALYLASDD-AKYVSGHN  275 (297)
Q Consensus       249 ~~-~~~~dia~~~~~l~~~~-~~~~tG~~  275 (297)
                      .+ -++++-|+..++++..+ -...+|..
T Consensus       251 ~~~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  251 PLTKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HhccCHHHHhhheehhccCccccCccccc
Confidence            12 26888888888886544 34444444

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-29  Score=216.81  Aligned_cols=224  Identities=25%  Similarity=0.335  Sum_probs=178.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+++||||+||||++++++|+++|++|++++|+.+..++..+..   +.++.++.+|++|++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            579999999999999999999999999999999877665554332   4568889999999998877653      3799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||..  ...+..+.+.+++++.+++|+.+++.+++.+++.+.+.+.+++|++||..+..+.+....|+.+|++++
T Consensus        76 ~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIG--EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcC--CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            999999987  455677889999999999999999999999999998777789999999998888788889999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC-CHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      .+++.++.++.+.||+++.|+||++.|++............ ............ .+ ....+++|+++.+..++..+
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLA-FP-LEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhh-cc-ccCCCHHHHHHHHHHHhcCC
Confidence            99999999999899999999999999987653322111100 111111111111 11 23478999999999887543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=214.65  Aligned_cols=203  Identities=18%  Similarity=0.222  Sum_probs=169.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+ . .++.++.+|++|+++++++++.+.+  +++|++||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEE
Confidence            789999999999999999999999999999999876655433 2 3577889999999999999998753  48999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC---CCCccchhhHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG---LAQHTYSVSKSAIIG  191 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~---~~~~~Y~~sK~a~~~  191 (297)
                      |||.......++.+.+.+++++.+++|+.+++.+.++++|.+++ ..++++++||..+..+.   ..+..|+++|++++.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~  156 (225)
T PRK08177         78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS  156 (225)
T ss_pred             cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHHHH
Confidence            99987433445677889999999999999999999999998864 34789999987765432   355689999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      |++.++.++.++||+|++|+||+++|++....                         ...++++.++.++..+...
T Consensus       157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~  207 (225)
T PRK08177        157 MTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-------------------------APLDVETSVKGLVEQIEAA  207 (225)
T ss_pred             HHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-------------------------CCCCHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999975321                         1246777888888777555

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-30  Score=221.18  Aligned_cols=205  Identities=27%  Similarity=0.352  Sum_probs=166.2

Q ss_pred             HHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCC
Q 022418           50 TAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDL  129 (297)
Q Consensus        50 ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~  129 (297)
                      ++++|+++|++|++++|+.++.+        ...++++|++|.++++++++++.   +++|+||||||...  .      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~--~------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG--T------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC--C------
Confidence            47899999999999999876542        12457899999999999998773   68999999999752  1      


Q ss_pred             CHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---------------------------cCCCCccc
Q 022418          130 NLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---------------------------GGLAQHTY  182 (297)
Q Consensus       130 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---------------------------~~~~~~~Y  182 (297)
                        +++++.+++|+.+++.+++.++|.|.+  .|++|++||..+..                           +.++...|
T Consensus        62 --~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 --APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             --CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence              247899999999999999999999854  48999999988762                           45567899


Q ss_pred             hhhHHHHHHHHHHHH-HHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMA-AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       183 ~~sK~a~~~~~~~la-~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +.||++++.+++.++ .|++++||+||+|+||+++|+|........    ......   ....+ .+++.+|+|+|+++.
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~----~~~~~~---~~~~~-~~~~~~pe~va~~~~  209 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML----GQERVD---SDAKR-MGRPATADEQAAVLV  209 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhh----hhHhhh---hcccc-cCCCCCHHHHHHHHH
Confidence            999999999999999 999999999999999999999875422110    001110   11123 377889999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +|+++...+++|+.+.+|||+...
T Consensus       210 ~l~s~~~~~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        210 FLCSDAARWINGVNLPVDGGLAAT  233 (241)
T ss_pred             HHcChhhcCccCcEEEecCchHHH
Confidence            999988899999999999997644

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=9.1e-29  Score=214.77  Aligned_cols=223  Identities=24%  Similarity=0.246  Sum_probs=184.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc-CCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH-NQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~-g~id~li  113 (297)
                      |+++||||+|+||+++++.|+++|++|++++|+.++++...+   ..++.+.+|++|.+++.++++.+.... +++|.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            689999999999999999999999999999999877665433   247788999999999999999887654 6899999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      ||+|..  ...++.+.+.+++++.+++|+.+++.+.+.+++.+++.+.+++|++||..+..+.+....|+.+|++++.++
T Consensus        80 ~~ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~  157 (256)
T PRK08017         80 NNAGFG--VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWS  157 (256)
T ss_pred             ECCCCC--CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHH
Confidence            999976  345577789999999999999999999999999998877789999999988888888899999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      ++++.++.+.+++++.++||+++|++..........   ......     ....+.+++|+|+|+.+..+++.....
T Consensus       158 ~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        158 DALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSD---KPVENP-----GIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhc---cchhhh-----HHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876543211000   000000     001134689999999999999876543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-28  Score=208.99  Aligned_cols=214  Identities=20%  Similarity=0.209  Sum_probs=178.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+++||++++++|+++|++|++++|+.+..++...   ..+.++.+|+++.++++++++++..  +++|++||
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDG--EALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEE
Confidence            689999999999999999999999999999999877665543   2356889999999999998876632  47999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC---ccchhhHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ---HTYSVSKSAIIG  191 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~---~~Y~~sK~a~~~  191 (297)
                      |+|..........+.+.++|++.+++|+.+++.+++++.|.+.+ ..+++++++|..+..+..+.   ..|+.+|++++.
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~  155 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALND  155 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHH
Confidence            99986323334556789999999999999999999999998855 35889999998776654332   359999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      +++.++.++  .+++|+.|+||+++|++...                         .....+++.+..++.++.......
T Consensus       156 ~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~  208 (222)
T PRK06953        156 ALRAASLQA--RHATCIALHPGWVRTDMGGA-------------------------QAALDPAQSVAGMRRVIAQATRRD  208 (222)
T ss_pred             HHHHHhhhc--cCcEEEEECCCeeecCCCCC-------------------------CCCCCHHHHHHHHHHHHHhcCccc
Confidence            999999886  46999999999999997531                         234579999999999887777888


Q ss_pred             cccEEEecCC
Q 022418          272 SGHNLVVDGG  281 (297)
Q Consensus       272 tG~~i~vdgG  281 (297)
                      +|..+..|++
T Consensus       209 ~~~~~~~~~~  218 (222)
T PRK06953        209 NGRFFQYDGV  218 (222)
T ss_pred             CceEEeeCCc
Confidence            9999999876

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.7e-29  Score=204.16  Aligned_cols=160  Identities=36%  Similarity=0.543  Sum_probs=146.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQ--HQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~--~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..++..+++   +.+++++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 68888998  56666665544   578899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++|||+|..  ..+.+.+.+.++|++++++|+.+++.+.+++.|    ++.+++|++||..+..+.+.+.+|+++|++
T Consensus        81 ld~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIF--SDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCT--TSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccc--cccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            99999999998  467788899999999999999999999999999    457999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 022418          189 IIGLVKSMAAEL  200 (297)
Q Consensus       189 ~~~~~~~la~el  200 (297)
                      +++|+++++.|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=8.4e-29  Score=211.78  Aligned_cols=221  Identities=27%  Similarity=0.339  Sum_probs=193.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC-----CCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-----PNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-----~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +.++|||+|+|||+++|..+..+|++|.++.|+.+++.+..++++     .++.+..+|++|.+++.++++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            699999999999999999999999999999999999999988872     336788999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |.+|||||..  .++.+.+.+.++++..+++|+.++++++++..+.|++.. .|+|+.+||..+..+..++++|+++|+|
T Consensus       114 d~l~~cAG~~--v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  114 DNLFCCAGVA--VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             ceEEEecCcc--cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            9999999988  788899999999999999999999999999999998776 7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +.+++..+++|+.++||+|..+.|+.++||.+.+.-..      .++.-....+    ......+||+|.+++.=+...
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t------kP~~t~ii~g----~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT------KPEETKIIEG----GSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc------CchheeeecC----CCCCcCHHHHHHHHHhHHhhc
Confidence            99999999999999999999999999999987654221      1111111111    144578999999988665443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.3e-30  Score=205.60  Aligned_cols=185  Identities=27%  Similarity=0.379  Sum_probs=167.0

Q ss_pred             CCCEEEEEcCC-CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH-HcCCcc
Q 022418           33 EEKVALITGAA-SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS-KHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas-~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~-~~g~id  110 (297)
                      +.|.|+|||++ ||||.++++.|++.|+.|+.++|+.+...++..+.+  +.....|+++++++.++..++.+ .+|++|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g--l~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG--LKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC--CeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            34677777776 799999999999999999999999998888876543  78899999999999999999998 779999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +|+||||...  ..+..|.+.+..+++|++|+.|....++++...+. +.+|+||++.|+.+..|.+..+.|.+||+|++
T Consensus        84 ~L~NNAG~~C--~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~li-kaKGtIVnvgSl~~~vpfpf~~iYsAsKAAih  160 (289)
T KOG1209|consen   84 LLYNNAGQSC--TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLI-KAKGTIVNVGSLAGVVPFPFGSIYSASKAAIH  160 (289)
T ss_pred             EEEcCCCCCc--ccccccCCHHHHHhhhccceeeeehHHHHHHHHHH-HccceEEEecceeEEeccchhhhhhHHHHHHH
Confidence            9999999874  45578899999999999999999999999985554 56799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhh
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVME  222 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~  222 (297)
                      .+++.|+.|+++.||+|..+.||-|.|+....
T Consensus       161 ay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  161 AYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999987654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-28  Score=210.70  Aligned_cols=197  Identities=18%  Similarity=0.139  Sum_probs=151.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.....+.  ........+.+|++|.+++.+       .++++
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~-------~~~~i   80 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDESPNEWIKWECGKEESLDK-------QLASL   80 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hccCCCeEEEeeCCCHHHHHH-------hcCCC
Confidence            468899999999999999999999999999999999987321111  111223678899999987754       34689


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC---CCceEEEEecccccccCCCCccchhhH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR---RSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|||||...     ..+.+.++|++.+++|+.+++.++++++|.|.++   +.+.+++.+|.++..+ +....|++||
T Consensus        81 DilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSK  154 (245)
T PRK12367         81 DVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISK  154 (245)
T ss_pred             CEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHH
Confidence            99999999752     2346789999999999999999999999999653   2334545556555444 3567899999


Q ss_pred             HHHHHHH---HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLV---KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~---~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++++.+.   +.++.|+.+.|++|+.+.||+++|++..                          ...++|+|+|+.+++.
T Consensus       155 aal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------------------~~~~~~~~vA~~i~~~  208 (245)
T PRK12367        155 RLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------------------IGIMSADFVAKQILDQ  208 (245)
T ss_pred             HHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------------------cCCCCHHHHHHHHHHH
Confidence            9986544   4444455778999999999999997521                          2246899999999999


Q ss_pred             hcCC
Q 022418          264 ASDD  267 (297)
Q Consensus       264 ~~~~  267 (297)
                      ++.+
T Consensus       209 ~~~~  212 (245)
T PRK12367        209 ANLG  212 (245)
T ss_pred             HhcC
Confidence            9665

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.7e-27  Score=200.18  Aligned_cols=219  Identities=22%  Similarity=0.278  Sum_probs=179.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .|+++||||+|+||+++++.|+++ ++|++++|+.+..++..+.. ..++++.+|++|++++.++++++    +++|++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQL----GRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhc----CCCCEEE
Confidence            479999999999999999999999 99999999987766555443 35788999999999998887753    5799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      |++|..  ......+.+.++|.+++++|+.+++.+.+.+++.+++. .+++|++||..+..+.++...|+.+|++++.++
T Consensus        77 ~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~  153 (227)
T PRK08219         77 HNAGVA--DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALA  153 (227)
T ss_pred             ECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHH
Confidence            999986  44456678899999999999999999999999988754 579999999998888888899999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      +.++.++... ++++++.||++++++........              ....+.+++++++|+|+.++++++...   .|
T Consensus       154 ~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~  215 (227)
T PRK08219        154 DALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE--------------GGEYDPERYLRPETVAKAVRFAVDAPP---DA  215 (227)
T ss_pred             HHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh--------------ccccCCCCCCCHHHHHHHHHHHHcCCC---CC
Confidence            9999988766 99999999999987654322110              001122668999999999999997652   45


Q ss_pred             cEEEec
Q 022418          274 HNLVVD  279 (297)
Q Consensus       274 ~~i~vd  279 (297)
                      .+.+++
T Consensus       216 ~~~~~~  221 (227)
T PRK08219        216 HITEVV  221 (227)
T ss_pred             ccceEE
Confidence            555544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=3.4e-26  Score=209.23  Aligned_cols=197  Identities=17%  Similarity=0.147  Sum_probs=153.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||+||||++++++|+++|++|++++|+.+++++........+..+.+|++|++++.+.+       +++
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~I  246 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKV  246 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCC
Confidence            4678999999999999999999999999999999999887665443333345678899999998876543       579


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC----ceEEEEecccccccCCCCccchhh
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS----GCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      |++|||||...     ..+.+.+++++++++|+.+++.++++++|.|++++.    +.+|++|+ +. ...+....|++|
T Consensus       247 DiLInnAGi~~-----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~AS  319 (406)
T PRK07424        247 DILIINHGINV-----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELS  319 (406)
T ss_pred             CEEEECCCcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHH
Confidence            99999999752     235788999999999999999999999999976532    34555544 33 333345679999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+|++.++. ++++  ..++.+..+.||+++|++..                          ...++||++|+.+++.++
T Consensus       320 KaAl~~l~~-l~~~--~~~~~I~~i~~gp~~t~~~~--------------------------~~~~spe~vA~~il~~i~  370 (406)
T PRK07424        320 KRALGDLVT-LRRL--DAPCVVRKLILGPFKSNLNP--------------------------IGVMSADWVAKQILKLAK  370 (406)
T ss_pred             HHHHHHHHH-HHHh--CCCCceEEEEeCCCcCCCCc--------------------------CCCCCHHHHHHHHHHHHH
Confidence            999999985 4333  25678888899999987521                          224689999999999997


Q ss_pred             CCCC
Q 022418          266 DDAK  269 (297)
Q Consensus       266 ~~~~  269 (297)
                      .+..
T Consensus       371 ~~~~  374 (406)
T PRK07424        371 RDFR  374 (406)
T ss_pred             CCCC
Confidence            7644

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=3.5e-24  Score=228.99  Aligned_cols=180  Identities=22%  Similarity=0.233  Sum_probs=156.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCch------------------------------------------
Q 022418           33 EEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQ------------------------------------------   69 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~------------------------------------------   69 (297)
                      +|+++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHH---HHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHh
Q 022418           70 -----LGQQTA---KELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN  141 (297)
Q Consensus        70 -----~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  141 (297)
                           ..++..   ++.+.++.++.||++|.++++++++.+.++ +++|.||||||+.  ..+.+.+.+.++|++.+++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~--~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL--ADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC--CCCCcccCCHHHHHHHHHHH
Confidence                 001111   223567889999999999999999999877 6899999999987  55678899999999999999


Q ss_pred             hhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh
Q 022418          142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM  221 (297)
Q Consensus       142 ~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~  221 (297)
                      +.+.+.+++++.+.+.    +++|++||..+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            9999999999877542    4699999999999999999999999999999999999874  489999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=1.9e-24  Score=194.32  Aligned_cols=225  Identities=15%  Similarity=0.115  Sum_probs=161.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++||+++||||+|+||++++++|+++|  ++|++++|+........... ..++.++.+|++|++++.++++       +
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            468999999999999999999999986  78999998876544443333 2468889999999999888775       5


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++||+||...  . +..+.   +..+.+++|+.++.++++++.+    .+.+++|++||.....   +...|+.+|++
T Consensus        75 iD~Vih~Ag~~~--~-~~~~~---~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~~  141 (324)
T TIGR03589        75 VDYVVHAAALKQ--V-PAAEY---NPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKLA  141 (324)
T ss_pred             CCEEEECcccCC--C-chhhc---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHHH
Confidence            899999999752  1 12222   2357899999999999999886    3456899999976543   34679999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .+.+++.++.+..+.|+++++++||.++++... ..+.......... ...........+.+++++|++++++.++... 
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~~~~~~~~~~~-~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-  218 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVPFFKSLKEEGV-TELPITDPRMTRFWITLEQGVNFVLKSLERM-  218 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHHHHHHHHHhCC-CCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-
Confidence            999999998887888999999999999987421 1111000000000 0000001112256899999999999998653 


Q ss_pred             CcccccEEEecCCc
Q 022418          269 KYVSGHNLVVDGGF  282 (297)
Q Consensus       269 ~~~tG~~i~vdgG~  282 (297)
                        ..|+++ +..|.
T Consensus       219 --~~~~~~-~~~~~  229 (324)
T TIGR03589       219 --LGGEIF-VPKIP  229 (324)
T ss_pred             --CCCCEE-ccCCC
Confidence              145666 44443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.92  E-value=2e-23  Score=187.77  Aligned_cols=225  Identities=16%  Similarity=0.216  Sum_probs=163.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++|+++||||+|+||++++++|+++|++|+++.|+.+..+......     ..++.++.+|+++++++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            5799999999999999999999999999999888876544332211     2368889999999998888775       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC----------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL----------  177 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~----------  177 (297)
                      ++|++||+||...      .+.+.+.+.+.+++|+.+++++++++.+.+   +.+++|++||..+..+..          
T Consensus        77 ~~d~vih~A~~~~------~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVA------ITVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCC------CCCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence            5899999999652      123345678899999999999999998753   246899999976543211          


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC-
Q 022418          178 ------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG-  244 (297)
Q Consensus       178 ------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (297)
                                  +...|+.||.+.|.+++.++++   ++++++.++|+.+++|......     ......+.....+.. 
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~-----~~~~~~i~~~~~~~~~  219 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTL-----NFSVAVIVELMKGKNP  219 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCC-----CchHHHHHHHHcCCCC
Confidence                        1246999999999999988776   5899999999999998753210     001111111111111 


Q ss_pred             --CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          245 --VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       245 --~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                        ...+.+++++|+|++++.+++...   .+..++++|+ ..+
T Consensus       220 ~~~~~r~~i~v~Dva~a~~~~l~~~~---~~~~~ni~~~-~~s  258 (325)
T PLN02989        220 FNTTHHRFVDVRDVALAHVKALETPS---ANGRYIIDGP-VVT  258 (325)
T ss_pred             CCCcCcCeeEHHHHHHHHHHHhcCcc---cCceEEEecC-CCC
Confidence              112578999999999999986542   2347888654 443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=2.3e-23  Score=189.20  Aligned_cols=234  Identities=13%  Similarity=0.045  Sum_probs=167.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++||+++||||+|+||++++++|+++|++|++++|+........+.+  ..++.++.+|+++.+++.++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            46899999999999999999999999999999999876544332222  345778899999999999888864     68


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc------------cCC
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL------------GGL  177 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~------------~~~  177 (297)
                      |++||+|+...      ...+.+++...+++|+.++..+++++.+ .  ...+++|++||.....            +..
T Consensus        77 d~vih~A~~~~------~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPL------VRKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCcccc------cccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            99999999541      2345566788999999999999998754 2  2246899999864321            123


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCCccCcchh---hHHHHhhcCCCHHHHHHHHHhcCCCCCCC
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCE----YGIRINCISPFAIPTPFVM---EEMSQIYAGVDASRLLELVYSTGVLEGTH  250 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (297)
                      +...|+.+|.+.+.+++.++.++.+    .+++++.++|+.+++|...   ...............  .........+.+
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~--~~~~~g~~~rd~  225 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKI--VIIRNPDATRPW  225 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCC--eEECCCCcccce
Confidence            4568999999999999999888754    3899999999999998531   111111100000000  001112234678


Q ss_pred             CCHHHHHHHHHHHhcCCCC--cccccEEEecCC
Q 022418          251 CEPNDIANAALYLASDDAK--YVSGHNLVVDGG  281 (297)
Q Consensus       251 ~~~~dia~~~~~l~~~~~~--~~tG~~i~vdgG  281 (297)
                      ++.+|+|++++.++.....  ...|+++++.+|
T Consensus       226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            9999999999987753211  123678999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=5.8e-23  Score=167.44  Aligned_cols=172  Identities=24%  Similarity=0.287  Sum_probs=145.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH------HHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTA------KELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~------~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |+++||||+++||.+++++|+++|+ .|++++|+.+..+...      ++.+.++.++.+|++++++++++++.+...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 5888888765433221      12255778899999999999999999988889


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|.+|||+|..  ....+.+.+.+++++++++|+.+++.+.+++.+    .+.++++++||..+..+.+.+..|+.+|+
T Consensus        81 ~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVL--DDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccC--CccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            999999999976  444567788999999999999999999998843    34588999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCcc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIP  216 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~  216 (297)
                      +++.+++.++.    .|+++..+.||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999877543    58899999999985

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=3.4e-22  Score=187.46  Aligned_cols=220  Identities=14%  Similarity=0.158  Sum_probs=162.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------------CCCeeEEEecCCCHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------------GPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------------~~~v~~~~~D~s~~~~i~~~   98 (297)
                      ...||+++||||+|+||++++++|+++|++|++++|+.++++...+++            ..++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999999998876655432            12578899999999887654


Q ss_pred             HHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCC
Q 022418           99 VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGL  177 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~  177 (297)
                      +       +++|+||||+|...  .      ...++...+++|+.++.++++++.+    .+.++||++||.++. .+.+
T Consensus       157 L-------ggiDiVVn~AG~~~--~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        157 L-------GNASVVICCIGASE--K------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             h-------cCCCEEEEcccccc--c------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCcc
Confidence            3       57999999999652  1      1124677899999999999999865    345799999998764 2322


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      . ..|. +|.++..+.+.+..++...||+++.|+||+++|++.... ..       ..+ ......... ++.+..+|||
T Consensus       218 ~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t-------~~v-~~~~~d~~~-gr~isreDVA  285 (576)
T PLN03209        218 A-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ET-------HNL-TLSEEDTLF-GGQVSNLQVA  285 (576)
T ss_pred             c-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cc-------cce-eeccccccC-CCccCHHHHH
Confidence            2 2344 788888888888888888999999999999998754321 00       000 000111222 6778999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      +.+++++++... ..+.++.+-.|-
T Consensus       286 ~vVvfLasd~~a-s~~kvvevi~~~  309 (576)
T PLN03209        286 ELMACMAKNRRL-SYCKVVEVIAET  309 (576)
T ss_pred             HHHHHHHcCchh-ccceEEEEEeCC
Confidence            999999985522 345677765553

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=1.5e-21  Score=182.08  Aligned_cols=248  Identities=13%  Similarity=0.045  Sum_probs=169.2

Q ss_pred             hhhhhccCCCCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh--------------------HHHHHH
Q 022418           17 LAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL--------------------GQQTAK   76 (297)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~--------------------~~~~~~   76 (297)
                      +-+..+-..+..+.++++|++|||||+|+||++++++|+++|++|++++|....                    ++....
T Consensus        30 ~~~~~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  109 (442)
T PLN02572         30 VTELATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE  109 (442)
T ss_pred             eecccCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH
Confidence            334445555667788999999999999999999999999999999998753210                    111111


Q ss_pred             HhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhc
Q 022418           77 ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM  156 (297)
Q Consensus        77 ~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  156 (297)
                      ..+.++.++.+|++|.+.+.++++..     ++|+|||+|+...   ......+.+++...+++|+.++.++++++...-
T Consensus       110 ~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g  181 (442)
T PLN02572        110 VSGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA  181 (442)
T ss_pred             hhCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence            11346889999999999999888864     6999999997542   123344556678889999999999999986631


Q ss_pred             cCCCCceEEEEecccccc------------------------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeC
Q 022418          157 IPRRSGCILCTASVTGLL------------------------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP  212 (297)
Q Consensus       157 ~~~~~g~iv~vss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~p  212 (297)
                         ...++|++||.....                        +..+...|+.||.+.|.+++.++..   +|+++..++|
T Consensus       182 ---v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~  255 (442)
T PLN02572        182 ---PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQ  255 (442)
T ss_pred             ---CCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEec
Confidence               124799999875321                        1123357999999999999888776   6899999999


Q ss_pred             CCccCcchhhH--HHHhhc---------CCCHHHHHHHH-------HhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc-
Q 022418          213 FAIPTPFVMEE--MSQIYA---------GVDASRLLELV-------YSTGVLEGTHCEPNDIANAALYLASDDAKYVSG-  273 (297)
Q Consensus       213 G~v~t~~~~~~--~~~~~~---------~~~~~~~~~~~-------~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG-  273 (297)
                      +.+++|.....  ......         ...........       .+.....+.+++++|+|++++.+++...  ..| 
T Consensus       256 ~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~  333 (442)
T PLN02572        256 GVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGE  333 (442)
T ss_pred             ccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCc
Confidence            99999864320  000000         00000111111       1111223578999999999999986431  134 


Q ss_pred             -cEEEecC
Q 022418          274 -HNLVVDG  280 (297)
Q Consensus       274 -~~i~vdg  280 (297)
                       .++++.+
T Consensus       334 ~~i~Nigs  341 (442)
T PLN02572        334 FRVFNQFT  341 (442)
T ss_pred             eeEEEeCC
Confidence             4677754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=1.7e-21  Score=175.01  Aligned_cols=223  Identities=15%  Similarity=0.192  Sum_probs=158.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +-+||+++||||+|+||++++++|+++|++|+++.|+.+..+......     ..++.++.+|+++++++.++++     
T Consensus         2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence            356899999999999999999999999999999988876543322111     2468889999999998888776     


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCC-------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGL-------  177 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~-------  177 (297)
                        ++|++||+|+...  .. .  .  +...+.+++|+.++..+++++...   .+..++|++||..+.. +.+       
T Consensus        77 --~~d~vih~A~~~~--~~-~--~--~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 --GCDAVFHTASPVF--FT-V--K--DPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             --CCCEEEEeCCCcC--CC-C--C--CchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCC
Confidence              5899999998642  11 1  1  123568899999999999987642   1345899999986531 110       


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          178 --------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       178 --------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                                    +...|+.||.+.|.+++.+.++   ++++++.++|+.+.+|.......     ...........+.
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~-----~~~~~~~~~~~g~  216 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLN-----FSVELIVDFINGK  216 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCC-----ccHHHHHHHHcCC
Confidence                          1356999999999999988776   58999999999999986432100     0111111111111


Q ss_pred             ---CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          244 ---GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       244 ---~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                         ....+.+++++|+|++++.++....   .+..++++|+
T Consensus       217 ~~~~~~~~~~v~v~Dva~a~~~al~~~~---~~~~yni~~~  254 (322)
T PLN02986        217 NLFNNRFYRFVDVRDVALAHIKALETPS---ANGRYIIDGP  254 (322)
T ss_pred             CCCCCcCcceeEHHHHHHHHHHHhcCcc---cCCcEEEecC
Confidence               0112568999999999999987542   2347888554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=5.1e-22  Score=179.75  Aligned_cols=244  Identities=15%  Similarity=0.031  Sum_probs=159.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHH---hCCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAKE---LGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.+.     ++.....   .+.++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            47889999999999999999999999999999999887542     2222111   124578899999999999998886


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccc------
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLL------  174 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~------  174 (297)
                      .     ++|+|||+|+...  .    ..+.+.....+++|+.++..+++++.+...+++ .-++|++||....-      
T Consensus        82 ~-----~~d~Vih~A~~~~--~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~  150 (340)
T PLN02653         82 I-----KPDEVYNLAAQSH--V----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ  150 (340)
T ss_pred             c-----CCCEEEECCcccc--h----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC
Confidence            5     6899999999752  1    123345677889999999999999988764321 12678887753221      


Q ss_pred             ----cCCCCccchhhHHHHHHHHHHHHHHHcc---CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCC
Q 022418          175 ----GGLAQHTYSVSKSAIIGLVKSMAAELCE---YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE  247 (297)
Q Consensus       175 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
                          +..+...|+.||.+.|.+++.++.++.-   .++.++.+.|+.-.+. ....+.................+.....
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~g~~~  229 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF-VTRKITRAVGRIKVGLQKKLFLGNLDAS  229 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc-chhHHHHHHHHHHcCCCCceEeCCCcce
Confidence                1123568999999999999999887431   1233344445433221 1111110000000000000111222223


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCC
Q 022418          248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       248 ~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      +.+++++|+|++++.++...    .+..+++.+|......+.
T Consensus       230 rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s~~e~  267 (340)
T PLN02653        230 RDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHTVEEF  267 (340)
T ss_pred             ecceeHHHHHHHHHHHHhcC----CCCcEEecCCCceeHHHH
Confidence            67899999999999998653    246788888876544333

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=3.7e-22  Score=181.60  Aligned_cols=236  Identities=17%  Similarity=0.123  Sum_probs=162.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEE-EEeCCchh--HHHHHHH-hCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVV-IADIQHQL--GQQTAKE-LGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi-~~~r~~~~--~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |++|||||+|+||++++++|.++|++++ +++|....  ....... ...++.++.+|++|.+++.++++..     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            6899999999999999999999998754 45554321  1111111 1235778899999999998888753     699


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc---C--CCCceEEEEecccccc-----------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI---P--RRSGCILCTASVTGLL-----------  174 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~g~iv~vss~~~~~-----------  174 (297)
                      +|||+||...      .+.+.++++..+++|+.++..+++++.+.+.   +  .+..++|++||.....           
T Consensus        77 ~Vih~A~~~~------~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         77 CVMHLAAESH------VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             EEEECCcccC------cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            9999999652      1234567789999999999999999987532   1  1235899998854211           


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHHhcCCCCCCC
Q 022418          175 --GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTH  250 (297)
Q Consensus       175 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (297)
                        +..+...|+.||.+.+.+++.++++   .++++..++|+.+++|...  ................. ..+.....+.+
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~g~g~~~~~~  226 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLP-VYGNGQQIRDW  226 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCce-EeCCCCeeeCc
Confidence              2234568999999999999999877   5789999999999988642  11111100000000000 01111223678


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       251 ~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++++|+++++..++...   ..|..+++.+|......+
T Consensus       227 i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s~~~  261 (355)
T PRK10217        227 LYVEDHARALYCVATTG---KVGETYNIGGHNERKNLD  261 (355)
T ss_pred             CcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcccHHH
Confidence            99999999999988653   257899998887754333

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=2.8e-21  Score=175.17  Aligned_cols=236  Identities=14%  Similarity=0.072  Sum_probs=153.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+..    +..+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999997642     22221111    235788999999999999888865   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------  174 (297)
                        ++|+|||+|+...  .    ..+.+.....+++|+.++.++++++.+.-. .+..++|++||....-           
T Consensus        78 --~~d~ViH~Aa~~~--~----~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSH--V----KVSFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCcccc--c----chhhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              6899999999752  1    122233467788999999999999877321 1124789998864321           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh-----hHHHHhhcCCCHHHHHHHHHhcCCCCCC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM-----EEMSQIYAGVDASRLLELVYSTGVLEGT  249 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (297)
                      +..+...|+.||.+.|.+++.++.++   ++.+....+..+.+|...     ....................+.....+.
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccC
Confidence            12245689999999999999998774   444433333333333211     1111000000000000011122223378


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCC
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      +++++|+|++++.++...    .+..+++.+|......+.
T Consensus       226 ~i~V~D~a~a~~~~~~~~----~~~~yni~~g~~~s~~e~  261 (343)
T TIGR01472       226 WGHAKDYVEAMWLMLQQD----KPDDYVIATGETHSVREF  261 (343)
T ss_pred             ceeHHHHHHHHHHHHhcC----CCccEEecCCCceeHHHH
Confidence            899999999999888654    235789888876554433

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.87  E-value=1.7e-20  Score=170.70  Aligned_cols=220  Identities=18%  Similarity=0.204  Sum_probs=155.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++.++|++|||||+|+||++++++|+++|++|++++|+.+..+.....+  ..++.++.+|+++.+++.++++      
T Consensus         5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc------
Confidence            45678899999999999999999999999999999999876555444433  3468889999999998887765      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHH--HHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC--------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVF--DQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--------  176 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~--------  176 (297)
                       .+|+|||+|+.... .......+.+.+  ...++.|+.++.++++++.+..   ..+++|++||.......        
T Consensus        79 -~~d~Vih~A~~~~~-~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         79 -GCDGVFHVAASMEF-DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             -CCCEEEECCccccC-CccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCC
Confidence             57999999997631 111122233333  4567888899999999987642   24689999996543210        


Q ss_pred             -----------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH
Q 022418          177 -----------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL  239 (297)
Q Consensus       177 -----------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                                       ++...|+.||.+.|.+++.++++   +++++..++|+.+++|.....+....    . .....
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~----~-~~~~~  225 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSI----Q-VLLSP  225 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchH----H-HHHHH
Confidence                             12237999999999999988777   58999999999999986432111000    0 00000


Q ss_pred             HHhc----------C--CCCCCCCCHHHHHHHHHHHhcCC
Q 022418          240 VYST----------G--VLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       240 ~~~~----------~--~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ..+.          .  ...+.+++++|+|++++.++...
T Consensus       226 ~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~  265 (353)
T PLN02896        226 ITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQT  265 (353)
T ss_pred             hcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCC
Confidence            0000          0  00136899999999999998643

>PLN02214 cinnamoyl-CoA reductase

Probab=99.87  E-value=3.3e-20  Score=168.05  Aligned_cols=220  Identities=15%  Similarity=0.170  Sum_probs=157.7

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH-HHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT-AKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+   ..++.++.+|+++.+++.++++    
T Consensus         5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   80 (342)
T PLN02214          5 VASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID----   80 (342)
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh----
Confidence            3457789999999999999999999999999999999987643221 1222   2357888999999998888776    


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-------  177 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-------  177 (297)
                         ++|+|||+|+..  .         +++.+.+++|+.++.++++++.+.    +..++|++||..+.++.+       
T Consensus        81 ---~~d~Vih~A~~~--~---------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 ---GCDGVFHTASPV--T---------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             ---cCCEEEEecCCC--C---------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcc
Confidence               589999999854  1         135678999999999999998752    345899999976544210       


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          178 --------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       178 --------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                                    +...|+.||.+.|.+++.++.+   +|+++..++|+.|++|........     ....+.....+.
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~-----~~~~~~~~~~g~  214 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINA-----SLYHVLKYLTGS  214 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc-----hHHHHHHHHcCC
Confidence                          2347999999999999988777   589999999999999864311000     000000111111


Q ss_pred             ----CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          244 ----GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       244 ----~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                          ....+.+++++|+|++++.+++...   .|..+++.++
T Consensus       215 ~~~~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~~  253 (342)
T PLN02214        215 AKTYANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLLAES  253 (342)
T ss_pred             cccCCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEEecC
Confidence                1122578999999999999986542   2345666543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.87  E-value=3.7e-21  Score=174.89  Aligned_cols=211  Identities=19%  Similarity=0.221  Sum_probs=151.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      -.+|++|||||+|+||++++++|+++|++|++++|+.+.........     ..++.++.+|+++.+.+.++++      
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            45689999999999999999999999999999999876554433221     1257889999999988887775      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----C-----
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----L-----  177 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----~-----  177 (297)
                       .+|++||+|+...  .   ...  +.+.+.+++|+.++.++++++.+..   ...++|++||.....+.    +     
T Consensus        77 -~~d~ViH~A~~~~--~---~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 -GCTGVFHVATPMD--F---ESK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             -CCCEEEEeCCCCC--C---CCC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcc
Confidence             5799999998642  1   111  2235788999999999999987642   13589999987543210    0     


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh--
Q 022418          178 -------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--  242 (297)
Q Consensus       178 -------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--  242 (297)
                                   +...|+.||.+.|.+++.++.+   +|++++.++|+.+++|........   .. .... .....  
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~---~~-~~~~-~~~~~~~  217 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPP---SL-ITAL-SLITGNE  217 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCc---cH-HHHH-HHhcCCc
Confidence                         1237999999999999998877   689999999999999864321100   00 0000 00000  


Q ss_pred             ---cCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          243 ---TGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       243 ---~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                         .....+.+++++|+|++++.++...
T Consensus       218 ~~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        218 AHYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             cccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence               0112267999999999999999754

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.87  E-value=2.2e-21  Score=176.20  Aligned_cols=236  Identities=17%  Similarity=0.125  Sum_probs=163.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH----HHHHh----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ----TAKEL----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .+++|+++||||+|.||.+++++|.++|++|++++|.......    .....    ..++.++.+|+.|.+.+.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            4677999999999999999999999999999999986543221    11111    1357789999999988877775  


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------  175 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------  175 (297)
                           .+|+|||.|+...  .    ..+.++....+++|+.++.++++++..    .+..++|++||......       
T Consensus        90 -----~~d~ViHlAa~~~--~----~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~  154 (348)
T PRK15181         90 -----NVDYVLHQAALGS--V----PRSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPKI  154 (348)
T ss_pred             -----CCCEEEECccccC--c----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCCC
Confidence                 5899999999652  1    122344567899999999999998854    23458999998643321       


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh------HHHHhhcC-CCHHHHHHHHHhcC
Q 022418          176 ----GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME------EMSQIYAG-VDASRLLELVYSTG  244 (297)
Q Consensus       176 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~------~~~~~~~~-~~~~~~~~~~~~~~  244 (297)
                          ..+...|+.+|.+.|.+++.++.+   +++++..++|+.+++|....      ........ ...+.+  ...+..
T Consensus       155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i--~~~g~g  229 (348)
T PRK15181        155 EERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPI--YINGDG  229 (348)
T ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCc--EEeCCC
Confidence                123458999999999999887666   58999999999999985321      11110000 000000  011222


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ...+.+++++|+|++++.++........|.++++.+|......+
T Consensus       230 ~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e  273 (348)
T PRK15181        230 STSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNE  273 (348)
T ss_pred             CceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHH
Confidence            22367899999999998776432222367899998887655433

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=7.8e-21  Score=156.78  Aligned_cols=171  Identities=24%  Similarity=0.350  Sum_probs=133.6

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCch---hHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           36 VALITGAASGIGKATAAKFISNGA-KVVIADIQHQ---LGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~---~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++||||.||||..+++.|+++|. +|++++|+..   ..++..++   .+.+++++.||++|++++.++++.+.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999986 6999999831   22333333   3678999999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|.+||.||..  ....+.+.+.++++..+..++.+..++.+.+.+    .+...+|++||+.+..+.+++..|+++.+.
T Consensus        82 i~gVih~ag~~--~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVL--ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeee--cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            99999999987  566788999999999999999999999888755    455789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCcc
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIP  216 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~  216 (297)
                      ++.|++..+.    .|.++.+|+.|+++
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHh----CCCCEEEEEccccC
Confidence            9999887544    46789999988875

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.86  E-value=5.8e-21  Score=158.50  Aligned_cols=191  Identities=21%  Similarity=0.239  Sum_probs=162.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-----eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-----KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-----~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      |+++|||+++|||.++|++|.+...     ++++++|+.++.++....+       ..++.++..|+++..++.++...+
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            8999999999999999999998754     4788999999988877665       236889999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCc-------------------------cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRS-------------------------IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI  157 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~-------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  157 (297)
                      .++|.++|.+..|||+...+.-.                         .-..+.+++...++.||.|++.+.+.+.|.+-
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence            99999999999999987422111                         00135678889999999999999999999987


Q ss_pred             CCCCceEEEEeccccccc---------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH
Q 022418          158 PRRSGCILCTASVTGLLG---------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS  225 (297)
Q Consensus       158 ~~~~g~iv~vss~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~  225 (297)
                      ......+|++||..+...         ..+..+|..||.+.+.+.-++.+.+.+.|+.-++++||...|.+......
T Consensus       164 ~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             cCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            666669999999988643         34557899999999999999999999999999999999999988776544

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=6.5e-20  Score=160.37  Aligned_cols=224  Identities=17%  Similarity=0.150  Sum_probs=173.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH--HHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ--TAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~--~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++|+||||||.||+.++++|+++|++|..+.|+++..+.  .+.++   ..+...+.+|+++++++.++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            78999999999999999999999999999999999986433  24444   3568999999999999999998       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-CC--------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-LA--------  178 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-~~--------  178 (297)
                      +.|+|+|.|....  .   ...+  .-.++++..+.|+.++++++...-   .--|+|++||.++.... +.        
T Consensus        78 gcdgVfH~Asp~~--~---~~~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVD--F---DLED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCC--C---CCCC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcccc
Confidence            5799999998652  1   1121  234799999999999999987532   34689999999987643 11        


Q ss_pred             ---C----------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc--
Q 022418          179 ---Q----------HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST--  243 (297)
Q Consensus       179 ---~----------~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--  243 (297)
                         |          ..|+.||.-.|..++.++.+   .++...+|+|+.|-+|.......     .+......+..+.  
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~-----~s~~~~l~~i~G~~~  219 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLN-----SSLNALLKLIKGLAE  219 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccc-----hhHHHHHHHHhcccc
Confidence               1          26999999999999999998   68999999999999997765221     1233344444442  


Q ss_pred             --CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          244 --GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       244 --~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                        ......+++++|+|.+.+++++++..  .|+.|.++....
T Consensus       220 ~~~n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~  259 (327)
T KOG1502|consen  220 TYPNFWLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS  259 (327)
T ss_pred             cCCCCceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence              11223469999999999999988754  588888877665

>PLN02583 cinnamoyl-CoA reductase

Probab=99.86  E-value=1.5e-20  Score=167.01  Aligned_cols=219  Identities=13%  Similarity=0.101  Sum_probs=153.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ--LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +-++|+++||||+|+||++++++|+++|++|+++.|+.+  ...+....+   +.++.++.+|++|.+++.+++.     
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence            445789999999999999999999999999999998643  222222332   2467889999999998876664     


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC---CC----
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG---LA----  178 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~---~~----  178 (297)
                        ..|.++|.++...  .     . ..++++.+++|+.+++++++++.+.+   +.+++|++||..+....   ..    
T Consensus        78 --~~d~v~~~~~~~~--~-----~-~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 --GCSGLFCCFDPPS--D-----Y-PSYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             --CCCEEEEeCccCC--c-----c-cccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence              5789988765331  1     1 12457899999999999999998754   23689999998764211   00    


Q ss_pred             -----C----------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          179 -----Q----------HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       179 -----~----------~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                           +          ..|+.||...|.+++.++++   .|+++++|+|+.|.+|........ ... ...     ....
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~-~~~-~~~-----~~~~  214 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY-LKG-AAQ-----MYEN  214 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh-hcC-Ccc-----cCcc
Confidence                 0          15999999999999888766   589999999999999865321110 000 000     0000


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                        ....+++++|+|++++.+++...  ..| .+.+.++.
T Consensus       215 --~~~~~v~V~Dva~a~~~al~~~~--~~~-r~~~~~~~  248 (297)
T PLN02583        215 --GVLVTVDVNFLVDAHIRAFEDVS--SYG-RYLCFNHI  248 (297)
T ss_pred             --cCcceEEHHHHHHHHHHHhcCcc--cCC-cEEEecCC
Confidence              01347999999999999997542  234 56555553

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.86  E-value=4e-20  Score=167.19  Aligned_cols=211  Identities=15%  Similarity=0.189  Sum_probs=150.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA--KELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~--~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++|+++||||+|+||++++++|+++|++|+++.|+.+......  ..+.  .++.++.+|++|++++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            45789999999999999999999999999998888765433221  1121  257889999999988887765       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------  175 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------  175 (297)
                      ++|++||+|+...     ...  .+.+...+++|+.++.++++++.+..   +.+++|++||.+....            
T Consensus        80 ~~d~vih~A~~~~-----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 GCDLVFHVATPVN-----FAS--EDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             cCCEEEEeCCCCc-----cCC--CChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceeeeccCCCCCCceecc
Confidence            5799999998531     111  12345678999999999999987631   3468999999764421            


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH--
Q 022418          176 ------------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY--  241 (297)
Q Consensus       176 ------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  241 (297)
                                  .++...|+.||.+.|.+++.++.+   +|++++.++|+.+++|..........     ........  
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~-----~~~~~~~~~~  221 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSL-----SLAMSLITGN  221 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcH-----HHHHHHHcCC
Confidence                        123457999999999999998776   68999999999999986421110000     00000000  


Q ss_pred             -----h---cC--CCCCCCCCHHHHHHHHHHHhcCC
Q 022418          242 -----S---TG--VLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       242 -----~---~~--~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                           +   ..  ...+.+++++|+|++++.+++..
T Consensus       222 ~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        222 EFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             ccccccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence                 0   00  01147899999999999998764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=3.9e-20  Score=157.36  Aligned_cols=241  Identities=17%  Similarity=0.101  Sum_probs=180.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCch--hHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQ--LGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~--~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++|||||+|+||...++.+.++..  +|+.+|.-.-  ..+.+..-. .+++.+++.|+.|.+.+.+++++.     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999765  4677766432  222222222 358999999999999999998865     79


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-------------ccC
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-------------LGG  176 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-------------~~~  176 (297)
                      |+++|-|.-+      ..|.+..+....+++|+.|++.++.++..+..+   -+++.||.-...             .+.
T Consensus        76 D~VvhfAAES------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAES------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhc------cccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            9999999865      456778888999999999999999999887643   468888863321             245


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       177 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      .|.++|++|||+-+.+++++.+-   +|+.++..++..-++|.+-  +..+..+...-... ..-.++.....++++.++
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~-~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGK-PLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCC-CCceecCCcceeeeEEeH
Confidence            57789999999999999999988   7999999999999998653  22222111000000 001234444558899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCCCCccc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQV  296 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~~~~  296 (297)
                      |-++++..++.++.   .|+++++.||.....-+.+..+|++
T Consensus       223 Dh~~ai~~Vl~kg~---~GE~YNIgg~~E~~Nlevv~~i~~~  261 (340)
T COG1088         223 DHCRAIDLVLTKGK---IGETYNIGGGNERTNLEVVKTICEL  261 (340)
T ss_pred             hHHHHHHHHHhcCc---CCceEEeCCCccchHHHHHHHHHHH
Confidence            99999999998763   3999999999887666666566654

>PLN02240 UDP-glucose 4-epimerase

Probab=99.85  E-value=7e-20  Score=166.39  Aligned_cols=245  Identities=16%  Similarity=0.122  Sum_probs=162.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH----HHHHH---hCCCeeEEEecCCCHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ----QTAKE---LGPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      |++++|+++||||+|+||.+++++|+++|++|++++|......    ...+.   ...++.++.+|++|++++.++++..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            4678899999999999999999999999999999987543221    11111   1245788999999999998887753


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc--------
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL--------  174 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~--------  174 (297)
                           ++|+|||+|+...  .    ..+.+++.+.+++|+.++..+++++..    .+..++|++||.....        
T Consensus        81 -----~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~  145 (352)
T PLN02240         81 -----RFDAVIHFAGLKA--V----GESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCT  145 (352)
T ss_pred             -----CCCEEEEccccCC--c----cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCC
Confidence                 7999999999652  1    123356678999999999999987643    3346899999864321        


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC---HHHHHHHHHh------
Q 022418          175 ---GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD---ASRLLELVYS------  242 (297)
Q Consensus       175 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~------  242 (297)
                         +..+...|+.+|.+.|.+++.++.+.  .++.+..++|+.++++.....+........   ...+.....+      
T Consensus       146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PLN02240        146 EEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT  223 (352)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence               11245689999999999999887652  467888888877766421100000000000   0001111100      


Q ss_pred             ---------cCCCCCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCCcccccCCCCC
Q 022418          243 ---------TGVLEGTHCEPNDIANAALYLASDD--AKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       243 ---------~~~~~~~~~~~~dia~~~~~l~~~~--~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                               .....+.+++++|+|++++.++...  .....|+++++.+|......+.+.
T Consensus       224 ~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~  283 (352)
T PLN02240        224 VFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVA  283 (352)
T ss_pred             EeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHH
Confidence                     0111245789999999988877532  112456899998888766554443

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=2e-19  Score=161.31  Aligned_cols=220  Identities=18%  Similarity=0.232  Sum_probs=153.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--Hh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK--EL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+.......  ..   ..++.++.+|+++++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            57899999999999999999999999999999988654322211  11   2467889999999988877765       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccC-C--------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGG-L--------  177 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~-~--------  177 (297)
                      ++|+|||+|+...  . ..  .  +...+.+++|+.++.++++++....   +..++|++||.++. ++. +        
T Consensus        76 ~~d~Vih~A~~~~--~-~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFY--H-DV--T--DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCccc--C-CC--C--ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            5799999998642  1 01  1  1124788999999999999987532   34589999997542 211 0        


Q ss_pred             ------C------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc--
Q 022418          178 ------A------QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST--  243 (297)
Q Consensus       178 ------~------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--  243 (297)
                            +      ...|+.+|.+.|.+++.+.++   .+++++.++|+.+++|.......     ...........+.  
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~-----~~~~~~~~~~~~~~~  217 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLN-----TSAEAILNLINGAQT  217 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCC-----chHHHHHHHhcCCcc
Confidence                  1      136999999999999888766   68999999999999986432100     0011111111111  


Q ss_pred             -CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 022418          244 -GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       244 -~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                       ......+++++|+|++++.++.....  .| .+++.|
T Consensus       218 ~~~~~~~~i~v~Dva~a~~~~~~~~~~--~~-~~~~~g  252 (322)
T PLN02662        218 FPNASYRWVDVRDVANAHIQAFEIPSA--SG-RYCLVE  252 (322)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHhcCcCc--CC-cEEEeC
Confidence             01225689999999999999875422  34 455543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.85  E-value=1.8e-20  Score=167.23  Aligned_cols=222  Identities=17%  Similarity=0.132  Sum_probs=157.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCch-hHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           36 VALITGAASGIGKATAAKFISNG--AKVVIADIQHQ-LGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~-~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++||||||+||.+++++|++.|  ++|++++|... ...+..+.+  ..++.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  68888876421 111111122  235788899999999999888754     689


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc------------cCCC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL------------GGLA  178 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~------------~~~~  178 (297)
                      +|||+|+...  .    +.+.+.++..+++|+.++..+++++.+...   ..++|++||.....            +..+
T Consensus        76 ~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESH--V----DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccC--c----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            9999998652  1    233456678899999999999998876432   24799999854221            1123


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHHhc-------CCCCCC
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYST-------GVLEGT  249 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  249 (297)
                      ...|+.+|.+.+.+++.++.+   .++++..++|+.++++...  ......        +.....+.       ......
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~  215 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLM--------ITNALAGKPLPVYGDGQQVRD  215 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHH--------HHHHhcCCCceEeCCCceEEe
Confidence            457999999999999998776   5799999999999987542  111111        11111111       011235


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++++|+|+++..++.+.   ..|+++++.+|....
T Consensus       216 ~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       216 WLYVEDHCRAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             eEEHHHHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence            789999999999998653   357899998886654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.84  E-value=3.4e-19  Score=159.54  Aligned_cols=183  Identities=18%  Similarity=0.116  Sum_probs=138.8

Q ss_pred             CCCCEEEEEcCCCcHHHH--HHHHHHHCCCeEEEEeCCchh---------------HHHHHHHhCCCeeEEEecCCCHHH
Q 022418           32 LEEKVALITGAASGIGKA--TAAKFISNGAKVVIADIQHQL---------------GQQTAKELGPNATFIACDVTKESD   94 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~--ia~~l~~~G~~Vi~~~r~~~~---------------~~~~~~~~~~~v~~~~~D~s~~~~   94 (297)
                      --+|++||||+++|+|.+  ++++| ++|++|+++++..+.               .++..++.+..+..+.||++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457999999999999999  89999 999999888854321               233334445567889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCCCCCC-------------------CccC-------------CCCHHHHHHHHHHhh
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVACKTP-------------------RSIV-------------DLNLEVFDQVMRINV  142 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~~~~~-------------------~~~~-------------~~~~~~~~~~~~~n~  142 (297)
                      ++++++.+.+++|++|+||||+|......                   +...             ..+.++++..  +++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHh
Confidence            99999999999999999999999873211                   0111             1233344333  333


Q ss_pred             hHH-----HHHHHHHHHhccCCCCceEEEEecccccccCCCC--ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCc
Q 022418          143 RGV-----VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ--HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI  215 (297)
Q Consensus       143 ~~~-----~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v  215 (297)
                      .|.     |.=.....+.|  ...+++|-.|..++....|.+  ..-+.+|+++|.-++.|+.+|++.|||+|++.+|++
T Consensus       196 Mggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             hccchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            343     22233444445  245899999998888777766  377999999999999999999999999999999999


Q ss_pred             cCcc
Q 022418          216 PTPF  219 (297)
Q Consensus       216 ~t~~  219 (297)
                      .|.-
T Consensus       274 ~T~A  277 (398)
T PRK13656        274 VTQA  277 (398)
T ss_pred             cchh
Confidence            9964

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.84  E-value=2.9e-20  Score=169.00  Aligned_cols=232  Identities=16%  Similarity=0.130  Sum_probs=157.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCch--hHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAK-VVIADIQHQ--LGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~--~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++||||+|+||++++++|+++|+. |+++++...  ..+... .+  +.++.++.+|++|.+++.+++++.     ++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            46999999999999999999999976 555555321  122222 22  245778899999999999888753     79


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-----CCceEEEEecccccc----------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-----RSGCILCTASVTGLL----------  174 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~vss~~~~~----------  174 (297)
                      |++||+||...  .    +.+.+..++.+++|+.++..+++++.+.+...     +..++|++||.....          
T Consensus        75 d~vih~A~~~~--~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (352)
T PRK10084         75 DAVMHLAAESH--V----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN  148 (352)
T ss_pred             CEEEECCcccC--C----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence            99999998652  1    11223457789999999999999998865321     234799998864321          


Q ss_pred             -----------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHH
Q 022418          175 -----------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVY  241 (297)
Q Consensus       175 -----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~  241 (297)
                                 +..+...|+.||.+.|.+++.++.+   .|+++..++|+.+++|...  ................. ..
T Consensus       149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~  224 (352)
T PRK10084        149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRT---YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP-IY  224 (352)
T ss_pred             cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeE-Ee
Confidence                       1123468999999999999998877   5788888999999887531  11111000000000000 01


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       242 ~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.....+.+++++|+|++++.+++..   ..|.++++.++....
T Consensus       225 ~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~s  265 (352)
T PRK10084        225 GKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEKK  265 (352)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence            11112356899999999999888653   247889998776543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.83  E-value=2.1e-19  Score=164.24  Aligned_cols=232  Identities=13%  Similarity=0.126  Sum_probs=154.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--------CCCeeEEEecCCCHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--------GPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ..+.++|+++||||+|+||++++++|+++|++|+++.|+.+..+.+....        ...+.++.+|++|.+++.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            34688999999999999999999999999999998888876544432210        1247888999999999988876


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc-ccc----
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG-LLG----  175 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~-~~~----  175 (297)
                             .+|.++|.|+...  ......    ......++|+.++..+++++...   .+-.++|++||..+ .++    
T Consensus       128 -------~~d~V~hlA~~~~--~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 -------GCAGVFHTSAFVD--PAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             -------hccEEEecCeeec--cccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCC
Confidence                   4689999998752  111111    11345678999999999987642   12347999999631 111    


Q ss_pred             ------------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH-hhcCCCHHHH
Q 022418          176 ------------------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ-IYAGVDASRL  236 (297)
Q Consensus       176 ------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~  236 (297)
                                        ..+...|+.||.+.|.+++.++.+   +|+++++++|+.|++|........ ....... ..
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g-~~  267 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKG-AQ  267 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcC-CC
Confidence                              012346999999999999988776   689999999999999964211000 0000000 00


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          237 LELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                       . ..+..  ...+++++|+|++++.+++.......|..+ +.+|....
T Consensus       268 -~-~~g~g--~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s  311 (367)
T PLN02686        268 -E-MLADG--LLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVS  311 (367)
T ss_pred             -c-cCCCC--CcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCcc
Confidence             0 11111  124789999999999988642111245555 44444433

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.83  E-value=3.7e-19  Score=160.78  Aligned_cols=239  Identities=18%  Similarity=0.175  Sum_probs=157.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KEL-GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+|+||++++++|+++|++|++++|.........   ... +.++.++.+|++|++++.++++.     .++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            47999999999999999999999999999876543222211   122 34567889999999998888764     2799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------CCC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------GLA  178 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------~~~  178 (297)
                      ++||+||...  ..    ...+...+.+++|+.++..+++++..    .+..++|++||......            ..+
T Consensus        76 ~vvh~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p  145 (338)
T PRK10675         76 TVIHFAGLKA--VG----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_pred             EEEECCcccc--cc----chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence            9999998752  11    12234567889999999999887654    34468999998653211            124


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC---HHHHHHHHHhc------------
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD---ASRLLELVYST------------  243 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~------------  243 (297)
                      ...|+.+|.+.|.+++.++.+.  .++++..++|+.++++.....+........   ...+.......            
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCC
Confidence            5789999999999999987653  357888888877766521100000000000   00111111110            


Q ss_pred             ---CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCC
Q 022418          244 ---GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       244 ---~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                         ....+.+++++|+|++++.++........|+++++.+|......+..
T Consensus       224 ~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  273 (338)
T PRK10675        224 TEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVV  273 (338)
T ss_pred             CCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHH
Confidence               01124689999999999988864212234689999888766554443

>PLN02427 UDP-apiose/xylose synthase

Probab=99.83  E-value=1.1e-19  Score=167.34  Aligned_cols=228  Identities=17%  Similarity=0.159  Sum_probs=153.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHH----hCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKE----LGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++.|+|+||||+|+||++++++|+++ |++|++++|+.+........    ...++.++.+|++|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45578999999999999999999998 58999999887654433221    12368899999999988887775      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------  176 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------  176 (297)
                       .+|+|||+|+...  ....    ..+..+.+..|+.++..+++++...    + .++|++||.......          
T Consensus        86 -~~d~ViHlAa~~~--~~~~----~~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICT--PADY----NTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccC--hhhh----hhChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeeeeeCCCcCCCCCcccc
Confidence             4799999999752  1111    1122345678999999999887542    2 579999986422100          


Q ss_pred             -----------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH----H-Hhh
Q 022418          177 -----------------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM----S-QIY  228 (297)
Q Consensus       177 -----------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~----~-~~~  228 (297)
                                             .+...|+.+|.+.|.+++.++..   .++++..++|+.++++......    . ...
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence                                   01236999999999999877655   6899999999999998532100    0 000


Q ss_pred             cCCCHHHHHHHHHh-------cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          229 AGVDASRLLELVYS-------TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       229 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      .............+       .....+.+++++|+|++++.+++... ...|..+++.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            00000000111111       11122468999999999999886531 235788999876

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=1.2e-18  Score=141.79  Aligned_cols=141  Identities=26%  Similarity=0.397  Sum_probs=113.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++   +.+..++.+|+++.++++++++++.++
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36689999999999999999999999999999999999887665554443   456778899999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-------CCceEEEEeccccc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-------RSGCILCTASVTGL  173 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~g~iv~vss~~~~  173 (297)
                      +|++|++|||||... ....+.+.+.++ ++  .+|+.+.+..++.+.+.+.++       +.|++..||+.++.
T Consensus        91 ~G~iDilVnnAG~~~-~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 FSRIDMLFQNAGLYK-IDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cCCCCEEEECCCcCC-CCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            999999999999873 233444445444 44  677777788888888887553       46788888876653

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.81  E-value=5.5e-19  Score=155.41  Aligned_cols=228  Identities=17%  Similarity=0.205  Sum_probs=157.5

Q ss_pred             EEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHH-HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           38 LITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQ-QTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        38 lVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~-~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |||||+|+||++++++|.++|  ++|.+++++..... ...... ....++.+|++|++++.++++       +.|++||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhc-------CCceEEE
Confidence            699999999999999999999  68888888765422 111211 223489999999999999887       6799999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---C--------------C
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---G--------------L  177 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---~--------------~  177 (297)
                      .|+...  .     ......+.++++|+.|+-++++++..    .+-.++|++||..+...   .              .
T Consensus        73 ~Aa~~~--~-----~~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~  141 (280)
T PF01073_consen   73 TAAPVP--P-----WGDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS  141 (280)
T ss_pred             eCcccc--c-----cCcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCccccc
Confidence            998762  1     11344588999999999999999875    34568999999887644   1              1


Q ss_pred             CCccchhhHHHHHHHHHHHHH-HHc-cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAA-ELC-EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND  255 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~-el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  255 (297)
                      ....|+.||+..|.+++.... ++. ...+++++|+|..|.+|.-....+.......... .....+.......++++++
T Consensus       142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGL-FLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcc-cceeecCCCceECcEeHHH
Confidence            234899999999999887655 111 1248999999999999854332221111000000 0011111112245788999


Q ss_pred             HHHHHHHHhcC---C--CCcccccEEEecCCcccc
Q 022418          256 IANAALYLASD---D--AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       256 ia~~~~~l~~~---~--~~~~tG~~i~vdgG~~~~  285 (297)
                      +|.+.+..+..   .  .....|+.+.+..|.+..
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            99988765432   2  356899999987776543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.81  E-value=1.5e-18  Score=155.87  Aligned_cols=216  Identities=16%  Similarity=0.139  Sum_probs=153.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||.++++.|+++|++|++++|+.+......   ...+.++.+|++|.+++.++++       .+|++||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~   70 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVA-------GCRALFH   70 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            47999999999999999999999999999999876543221   2357889999999998887775       5799999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC---------------CC
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL---------------AQ  179 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~---------------~~  179 (297)
                      +|+...  .      ..+++...+++|+.++..+++++..    .+.+++|++||.......+               ..
T Consensus        71 ~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~  138 (328)
T TIGR03466        71 VAADYR--L------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMI  138 (328)
T ss_pred             eceecc--c------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccccc
Confidence            998541  1      1123567889999999999998765    3346899999976543111               13


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc----CCCCCCCCCHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST----GVLEGTHCEPND  255 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d  255 (297)
                      ..|+.+|.+.|.+++.++.+   .+++++.++|+.+.++.......      ....+.......    ......+++++|
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D  209 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTP------TGRIIVDFLNGKMPAYVDTGLNLVHVDD  209 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCc------HHHHHHHHHcCCCceeeCCCcceEEHHH
Confidence            47999999999999988766   58999999999998875321100      000000000000    011135789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +|+++..++...   ..|+.++++ |....
T Consensus       210 ~a~a~~~~~~~~---~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       210 VAEGHLLALERG---RIGERYILG-GENLT  235 (328)
T ss_pred             HHHHHHHHHhCC---CCCceEEec-CCCcC
Confidence            999999888653   367888885 44433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.80  E-value=5.2e-19  Score=160.54  Aligned_cols=224  Identities=15%  Similarity=0.166  Sum_probs=151.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCC-CHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVT-KESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||+|.||++++++|++. |++|++++|+.+.......  ...+.++.+|++ +.+.+.++++       ++|+|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~V   72 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVK-------KCDVI   72 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHc-------CCCEE
Confidence            57999999999999999999986 6999999987654332221  235888999998 6666655543       58999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------------
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------------  176 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------------  176 (297)
                      ||+|+...  +.    ...++.+..+++|+.++.+++.++..    .+ .++|++||.......                
T Consensus        73 iH~aa~~~--~~----~~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         73 LPLVAIAT--PA----TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             EECcccCC--hH----HhhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCc
Confidence            99998652  11    11234467789999999999988764    22 589999996432110                


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH--HhhcCCCHHHHHHHHH-------hcCC
Q 022418          177 --LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--QIYAGVDASRLLELVY-------STGV  245 (297)
Q Consensus       177 --~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~  245 (297)
                        .+...|+.+|.+.|.+.+.++.+   .++++..++|+.++++.......  ..........+.....       +...
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~  218 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGS  218 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCc
Confidence              11236999999999999988766   68899999999998875321000  0000000011111111       1111


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      ..+.+++++|+|++++.++........|+++++.++
T Consensus       219 ~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        219 QKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            235789999999999999876432245889999875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=5.3e-18  Score=156.22  Aligned_cols=228  Identities=15%  Similarity=0.113  Sum_probs=179.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      -++||+++||||+|-||+++|+++++.+.+ +++.+|++.++-....++     ..+..++.+|+.|.+.+.++++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            489999999999999999999999999875 888999988877766665     257888999999999999999865  


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                         ++|+++|.|..-      ...+....+.+.++.|+.|+.++++++..    .+-.++|.+|+--+..|.   ..|++
T Consensus       325 ---kvd~VfHAAA~K------HVPl~E~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~Pt---NvmGa  388 (588)
T COG1086         325 ---KVDIVFHAAALK------HVPLVEYNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNPT---NVMGA  388 (588)
T ss_pred             ---CCceEEEhhhhc------cCcchhcCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCCc---hHhhH
Confidence               799999999865      23355667889999999999999999976    455679999998888664   57999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +|...|.++++++......+-++.+++-|.|-+..-.  +.+++...+-     -+..-.....++.+++.+|.++.++.
T Consensus       389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~G-----gplTvTdp~mtRyfMTI~EAv~LVlq  463 (588)
T COG1086         389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEG-----GPLTVTDPDMTRFFMTIPEAVQLVLQ  463 (588)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcC-----CCccccCCCceeEEEEHHHHHHHHHH
Confidence            9999999999998876655689999999999775322  1121111100     00111222345788999999999998


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ...-.   -.|+++.+|-|.+.
T Consensus       464 A~a~~---~gGeifvldMGepv  482 (588)
T COG1086         464 AGAIA---KGGEIFVLDMGEPV  482 (588)
T ss_pred             HHhhc---CCCcEEEEcCCCCe
Confidence            87553   47999999998764

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.80  E-value=2.6e-18  Score=154.00  Aligned_cols=240  Identities=15%  Similarity=0.090  Sum_probs=160.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++||||+|+||.+++++|.++|++|++++|.............  ..+..+.+|+++++++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999999988765432222222211  2577889999999999888774     3799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTY  182 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y  182 (297)
                      |+||...  ..    .+.++..+.++.|+.++..+++++..    .+..++|++||......           ..+...|
T Consensus        76 ~~ag~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIA--VG----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccC--cc----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            9999752  11    12344567889999999999988654    23468999887543211           1134679


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC--HHHHHHHHHhc---------------CC
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD--ASRLLELVYST---------------GV  245 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~---------------~~  245 (297)
                      +.+|++.+.+++.++.+.  .++++..++|+.++++..............  -..+.....+.               ..
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987652  478999999999988743211100000000  00000111100               00


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCCC
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPA  292 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~  292 (297)
                      ....+++++|+|+++..++........|+.+++.+|.+....+.+..
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~  270 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEA  270 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHH
Confidence            11357899999999999986432334578999988877665554443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.80  E-value=2.1e-18  Score=147.63  Aligned_cols=212  Identities=19%  Similarity=0.260  Sum_probs=160.0

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      |+||||+|.||.+++++|.++|+.|+.+.|+...........  ++.++.+|++|.+.+.++++..     .+|.+||.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHH-----TESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--eEEEEEeecccccccccccccc-----CceEEEEee
Confidence            799999999999999999999999988888776554433332  7899999999999999999876     799999999


Q ss_pred             cCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccchhh
Q 022418          117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTYSVS  185 (297)
Q Consensus       117 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~s  185 (297)
                      +...      .+.+.+.....++.|+.++..+++.+...    +..++|++||.......           .+...|+.+
T Consensus        74 ~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   74 AFSS------NPESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             SSSS------HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             cccc------ccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccc
Confidence            8651      11233567888999999999999988753    33689999995433211           134579999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc----h-hhHHHHhhcCCCHHHHHHHHHhc-------CCCCCCCCCH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF----V-MEEMSQIYAGVDASRLLELVYST-------GVLEGTHCEP  253 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~----~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  253 (297)
                      |...|.+.+.+.++   .++++..++|+.++++.    . ....        .........+.       ....+.++++
T Consensus       144 K~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v  212 (236)
T PF01370_consen  144 KRAAEELLRDYAKK---YGLRVTILRPPNVYGPGNPNNNSSSFL--------PSLIRQALKGKPIKIPGDGSQVRDFIHV  212 (236)
T ss_dssp             HHHHHHHHHHHHHH---HTSEEEEEEESEEESTTSSSSSTSSHH--------HHHHHHHHTTSSEEEESTSSCEEEEEEH
T ss_pred             cccccccccccccc---ccccccccccccccccccccccccccc--------chhhHHhhcCCcccccCCCCCccceEEH
Confidence            99999999998887   48999999999999987    1 1111        11122222211       1223557899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEe
Q 022418          254 NDIANAALYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       254 ~dia~~~~~l~~~~~~~~tG~~i~v  278 (297)
                      +|+|++++.+++...  ..|+++++
T Consensus       213 ~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  213 DDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHHHhCCC--CCCCEEEe
Confidence            999999999998764  57888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=3.5e-18  Score=146.14  Aligned_cols=230  Identities=16%  Similarity=0.177  Sum_probs=163.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      +++|||||+|-||++.+.+|++.|+.|+++|+......+.....  ...+++.|+.|.+.+.+++++.     +||.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-----~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-----KIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-----CCCEEEE
Confidence            57999999999999999999999999999999877655554432  1688999999999999988875     8999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC------------CCccc
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL------------AQHTY  182 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~------------~~~~Y  182 (297)
                      .||..      ....+.+...++++.|+.++..|++++...    +-.++| +||.++.++.+            +..+|
T Consensus        74 FAa~~------~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~v-FSStAavYG~p~~~PI~E~~~~~p~NPY  142 (329)
T COG1087          74 FAASI------SVGESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFI-FSSTAAVYGEPTTSPISETSPLAPINPY  142 (329)
T ss_pred             Ccccc------ccchhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEE-EecchhhcCCCCCcccCCCCCCCCCCcc
Confidence            99977      345677889999999999999999998663    323344 55566665533            44689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH-------------HHhc------
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL-------------VYST------  243 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------------~~~~------  243 (297)
                      +.||.+.|.+.+.+++.   .+.++..++=..+.+.-....+.+...+.  ....+.             .+++      
T Consensus       143 G~sKlm~E~iL~d~~~a---~~~~~v~LRYFN~aGA~~~G~iGe~~~~~--thLip~~~q~A~G~r~~l~ifG~DY~T~D  217 (329)
T COG1087         143 GRSKLMSEEILRDAAKA---NPFKVVILRYFNVAGACPDGTLGQRYPGA--TLLIPVAAEAALGKRDKLFIFGDDYDTKD  217 (329)
T ss_pred             hhHHHHHHHHHHHHHHh---CCCcEEEEEecccccCCCCCccCCCCCCc--chHHHHHHHHHhcCCceeEEeCCCCCCCC
Confidence            99999999999999888   45676666644443321111111000000  000000             1111      


Q ss_pred             -CCCCCCCCCHHHHHHHHHHHhcCCCCcccc--cEEEecCCcccccCCCC
Q 022418          244 -GVLEGTHCEPNDIANAALYLASDDAKYVSG--HNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       244 -~~~~~~~~~~~dia~~~~~l~~~~~~~~tG--~~i~vdgG~~~~~~~~~  290 (297)
                       .+. ++++++.|+|++.+..+.--..  .|  .++++..|...++.+.+
T Consensus       218 GT~i-RDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G~SV~evi  264 (329)
T COG1087         218 GTCI-RDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNGFSVLEVI  264 (329)
T ss_pred             CCee-eeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCceeHHHHH
Confidence             233 7789999999998877654322  34  48999888888765544

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.79  E-value=1.2e-18  Score=170.56  Aligned_cols=229  Identities=16%  Similarity=0.173  Sum_probs=155.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH-HHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD-VSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~~~~~~g~  108 (297)
                      -.++|+|+||||+|+||++++++|+++ |++|++++|+.........  ..++.++.+|++|.++ ++++++       +
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~-------~  382 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIK-------K  382 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhc-------C
Confidence            467889999999999999999999986 7999999997754322211  2358888999998655 344443       6


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------------  175 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------------  175 (297)
                      +|+|||.|+...  ..    ...+...+.+++|+.++..+++++...    + .++|++||......             
T Consensus       383 ~D~ViHlAa~~~--~~----~~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T PRK08125        383 CDVVLPLVAIAT--PI----EYTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNL  451 (660)
T ss_pred             CCEEEECccccC--ch----hhccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCcccccc
Confidence            899999999763  11    112234567899999999999998752    2 47999999643210             


Q ss_pred             --C---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHH-------H
Q 022418          176 --G---LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELV-------Y  241 (297)
Q Consensus       176 --~---~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~-------~  241 (297)
                        .   .+...|+.||.+.|.+++.++.+   +|+++..++|+.+++|..........  .......+....       .
T Consensus       452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~  528 (660)
T PRK08125        452 IVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLV  528 (660)
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEe
Confidence              0   12246999999999999998776   58999999999999985321000000  000001111111       0


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       242 ~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      +.....+.+++++|++++++.+++.......|+.+++.+|.
T Consensus       529 g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        529 DGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            11122356899999999999998654223468899998874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.78  E-value=3.1e-18  Score=168.12  Aligned_cols=238  Identities=17%  Similarity=0.109  Sum_probs=160.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCc--hhHHHHHHH-hCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISN--GAKVVIADIQH--QLGQQTAKE-LGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~--~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..++|+||||||+|+||++++++|.++  |++|++++|..  +........ ...++.++.+|++|.+.+.+++..    
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh----
Confidence            467799999999999999999999998  67899888753  222222111 134688899999998887665532    


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------  174 (297)
                       .++|+|||+|+...  .    +.+..+..+.+++|+.++..+++++...   ....++|++||....-           
T Consensus        79 -~~~D~ViHlAa~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 -EGIDTIMHFAAQTH--V----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             -cCCCEEEECCCccC--c----hhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCcc
Confidence             27999999999752  1    1223344678899999999999987542   1245899999864321           


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhcCCCCCC
Q 022418          175 ---GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYSTGVLEGT  249 (297)
Q Consensus       175 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (297)
                         +..+...|+.+|.+.|.+++.+..+   +++++..++|+.|+++....  ................ ..+.....+.
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~-i~g~g~~~r~  224 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLP-IHGDGSNVRS  224 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeE-EecCCCceEe
Confidence               1113457999999999999988776   57999999999999975321  1111000000000000 0011112245


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCC
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      +++++|+|+++..++...   ..|.++++.++......+.
T Consensus       225 ~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s~~el  261 (668)
T PLN02260        225 YLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERRVIDV  261 (668)
T ss_pred             eEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeEHHHH
Confidence            799999999999888653   2478899988766554443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.77  E-value=7.6e-17  Score=139.83  Aligned_cols=213  Identities=14%  Similarity=0.146  Sum_probs=138.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      ..++|+++||||+|+||++++++|+++|++|+++.|+.++....... +..+.++.+|+++. +++.+.+   .   .++
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~---~---~~~   86 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAI---G---DDS   86 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHh---h---cCC
Confidence            46678999999999999999999999999999999998765543322 34688899999983 3332222   0   268


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---cCCCCccchhhH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---GGLAQHTYSVSK  186 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---~~~~~~~Y~~sK  186 (297)
                      |++|+++|... ....         ...+++|+.++..+++++..    .+.+++|++||.....   +.+....|...|
T Consensus        87 d~vi~~~g~~~-~~~~---------~~~~~~n~~~~~~ll~a~~~----~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~  152 (251)
T PLN00141         87 DAVICATGFRR-SFDP---------FAPWKVDNFGTVNLVEACRK----AGVTRFILVSSILVNGAAMGQILNPAYIFLN  152 (251)
T ss_pred             CEEEECCCCCc-CCCC---------CCceeeehHHHHHHHHHHHH----cCCCEEEEEccccccCCCcccccCcchhHHH
Confidence            99999998642 1111         11246788888888888743    4557899999986422   222234566666


Q ss_pred             HHHHHH-HHHHHHH-HccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGL-VKSMAAE-LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~-~~~la~e-l~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      .+...+ .+..+.+ +...|++++.|+||++.++.......  ..  .         ... .....++++|+|+.+..++
T Consensus       153 ~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~--~~--~---------~~~-~~~~~i~~~dvA~~~~~~~  218 (251)
T PLN00141        153 LFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIV--ME--P---------EDT-LYEGSISRDQVAEVAVEAL  218 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEE--EC--C---------CCc-cccCcccHHHHHHHHHHHh
Confidence            544433 2333332 45679999999999998764321100  00  0         000 1134689999999999998


Q ss_pred             cCCCCcccccEEEecC
Q 022418          265 SDDAKYVSGHNLVVDG  280 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdg  280 (297)
                      .....  .+.++.+-+
T Consensus       219 ~~~~~--~~~~~~~~~  232 (251)
T PLN00141        219 LCPES--SYKVVEIVA  232 (251)
T ss_pred             cChhh--cCcEEEEec
Confidence            66432  334455544

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.76  E-value=2.3e-17  Score=150.07  Aligned_cols=224  Identities=15%  Similarity=0.111  Sum_probs=148.0

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhH------HHHHHHhC--------CCeeEEEecCCCHH------
Q 022418           36 VALITGAASGIGKATAAKFISNG--AKVVIADIQHQLG------QQTAKELG--------PNATFIACDVTKES------   93 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~------~~~~~~~~--------~~v~~~~~D~s~~~------   93 (297)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..      ++..+...        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999986532      12111111        46888999998753      


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      ....+.       ..+|++||||+...  .    .   ..++...++|+.++..+++.+..    .+..+++++||....
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~--~----~---~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVN--W----V---YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEec--c----C---CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEcccccc
Confidence            222222       36899999998652  1    1   22466788999999999988765    233459999998765


Q ss_pred             ccC----------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHH
Q 022418          174 LGG----------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL  237 (297)
Q Consensus       174 ~~~----------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  237 (297)
                      ...                .....|+.+|.+.|.+++.++.    .|++++.++||.+.++.........  ........
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~--~~~~~~~~  214 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSS--DILWRMVK  214 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCch--hHHHHHHH
Confidence            321                1124799999999998876543    3899999999999986221100000  00000000


Q ss_pred             HHH-HhcCC----CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          238 ELV-YSTGV----LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       238 ~~~-~~~~~----~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ... .+..+    ....+++++|+|++++.++.......+|+++++.++....
T Consensus       215 ~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s  267 (367)
T TIGR01746       215 GCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVS  267 (367)
T ss_pred             HHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence            000 01111    1133789999999999998765443458999998875544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.76  E-value=2.5e-18  Score=153.47  Aligned_cols=223  Identities=14%  Similarity=0.117  Sum_probs=146.0

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH--HcCCccEEEE
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS--KHNQLDIMYN  114 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~--~~g~id~li~  114 (297)
                      ++||||+|+||++++++|+++|++++++.|+.......       .....+|++|..+.+++++.+.+  .++++|+|||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih   74 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFH   74 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEE
Confidence            79999999999999999999999766665554322111       11234677776666666665542  2357999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  183 (297)
                      +|+...  ..   ..+   ....++.|+.++.++++++..    .+ .++|++||......           ..+...|+
T Consensus        75 ~A~~~~--~~---~~~---~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         75 EGACSS--TT---EWD---GKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             CceecC--Cc---CCC---hHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            998652  11   112   245789999999999999865    22 36999988753221           12346799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH--------hcCCCCCCCCCHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY--------STGVLEGTHCEPND  255 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d  255 (297)
                      .+|.+.|.+++.++.+   .++++..++|+.++++......  ...............        +.....+.+++++|
T Consensus       142 ~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        142 YSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKG--SMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCC--ccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            9999999998887665   5799999999999997532110  000000000001111        11111256799999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +|+++..+++..    .+.++++.+|......+
T Consensus       217 ~a~a~~~~~~~~----~~~~yni~~~~~~s~~e  245 (308)
T PRK11150        217 VAAVNLWFWENG----VSGIFNCGTGRAESFQA  245 (308)
T ss_pred             HHHHHHHHHhcC----CCCeEEcCCCCceeHHH
Confidence            999999888654    24699998887655433

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=8.1e-18  Score=145.92  Aligned_cols=222  Identities=15%  Similarity=0.121  Sum_probs=150.7

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-----CCCee----EEEecCCCHHHHHHHHHHHHHHc
Q 022418           37 ALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-----GPNAT----FIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~v~----~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ||||||+|-||+++++++++.+. ++++++|++..+-++..++     +.++.    .+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999986 6999999999888877776     22343    4588999999999888865    


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                       ++|+++|.|+.-  +.    .+..+.+.+.+++|+.|+.++++++..+    +-.++|++|+--+..|   ...|++||
T Consensus        77 -~pdiVfHaAA~K--hV----pl~E~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~P---tnvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALK--HV----PLMEDNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNP---TNVMGATK  142 (293)
T ss_dssp             -T-SEEEE--------H----HHHCCCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcC--CC----ChHHhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCC---CcHHHHHH
Confidence             899999999865  22    1223456889999999999999999873    4568999999888765   46899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch---hhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ...|.++...+....+.+.++.+|+-|.|-...-   .-+.++...+.      +..-.....++.+++++|.++.++..
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~------PlTvT~p~mtRffmti~EAv~Lvl~a  216 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGG------PLTVTDPDMTRFFMTIEEAVQLVLQA  216 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTS------SEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCC------cceeCCCCcEEEEecHHHHHHHHHHH
Confidence            9999999999888766778999999999976321   11111111000      00001112346789999999999988


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.-.   ..|+++..|-|.+..
T Consensus       217 ~~~~---~~geifvl~mg~~v~  235 (293)
T PF02719_consen  217 AALA---KGGEIFVLDMGEPVK  235 (293)
T ss_dssp             HHH-----TTEEEEE---TCEE
T ss_pred             HhhC---CCCcEEEecCCCCcC
Confidence            7544   368999999987754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.75  E-value=1.1e-17  Score=153.18  Aligned_cols=228  Identities=15%  Similarity=0.094  Sum_probs=153.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -++|+++||||+|.||++++++|.++|++|++++|.....   .........++.+|+++.+.+.++++       ++|+
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   88 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---MSEDMFCHEFHLVDLRVMENCLKVTK-------GVDH   88 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---cccccccceEEECCCCCHHHHHHHHh-------CCCE
Confidence            3778999999999999999999999999999999865321   11111125678899999887766654       5799


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------------
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------------  174 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------------  174 (297)
                      |||.|+...  ......   .+....+..|+.++.++++++..    .+..++|++||.....                 
T Consensus        89 Vih~Aa~~~--~~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~  159 (370)
T PLN02695         89 VFNLAADMG--GMGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDAW  159 (370)
T ss_pred             EEEcccccC--Cccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccCC
Confidence            999998652  111111   12244567899999999998754    2345899999864211                 


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHH-HH--------HhcCC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE-LV--------YSTGV  245 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~  245 (297)
                      +..+...|+.+|.+.|.+++.++..   .++++..++|+.+++|.......+   ......+.. ..        .+...
T Consensus       160 p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~g~g~  233 (370)
T PLN02695        160 PAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGR---EKAPAAFCRKALTSTDEFEMWGDGK  233 (370)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccc---cccHHHHHHHHHcCCCCeEEeCCCC
Confidence            2234568999999999999887665   689999999999999843100000   000001110 00        01111


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ..+.+++++|++++++.++...    .++.+++.+|......+
T Consensus       234 ~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s~~e  272 (370)
T PLN02695        234 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNE  272 (370)
T ss_pred             eEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCceeHHH
Confidence            2256799999999999987653    25788998877655443

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.75  E-value=1.1e-17  Score=156.08  Aligned_cols=222  Identities=15%  Similarity=0.128  Sum_probs=148.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH-HHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ-TAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .-++|+|+||||+|+||++++++|.++|++|++++|......+ ..... ..++.++..|+.++.     +       ..
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cC
Confidence            3477899999999999999999999999999999875432221 11112 245777888987652     1       15


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc--------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL--------------  174 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~--------------  174 (297)
                      +|+|||.|+...  ..    ....+..+.+++|+.++.++++++...    + .++|++||.....              
T Consensus       184 ~D~ViHlAa~~~--~~----~~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~  252 (442)
T PLN02206        184 VDQIYHLACPAS--PV----HYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWGN  252 (442)
T ss_pred             CCEEEEeeeecc--hh----hhhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCcccccc
Confidence            899999998652  11    111234678999999999999988652    2 3799999875431              


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH-------hcCC
Q 022418          175 --GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY-------STGV  245 (297)
Q Consensus       175 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  245 (297)
                        +..+...|+.+|.+.|.+++.+.+.   .++++..++|+.++++.........    ....+.....       +...
T Consensus       253 ~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~----v~~~i~~~l~~~~i~i~g~G~  325 (442)
T PLN02206        253 VNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRV----VSNFVAQALRKEPLTVYGDGK  325 (442)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccch----HHHHHHHHHcCCCcEEeCCCC
Confidence              1112357999999999998887665   5799999999999987532100000    0001111111       1111


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ..+.+++++|+|++++.+++..    .+..+++.+|.....
T Consensus       326 ~~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~sl  362 (442)
T PLN02206        326 QTRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGEFTM  362 (442)
T ss_pred             EEEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCceeH
Confidence            1245889999999999988643    234799987765443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.74  E-value=1e-17  Score=149.13  Aligned_cols=215  Identities=15%  Similarity=0.123  Sum_probs=145.2

Q ss_pred             EEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECcc
Q 022418           38 LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        38 lVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag  117 (297)
                      |||||+|+||.++++.|.++|++|+++.+.                 ..+|+++.+++.++++..     ++|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTRQADVEAFFAKE-----KPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeee
Confidence            699999999999999999999988766432                 147999999988887753     6899999998


Q ss_pred             CCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------------CCC-Ccc
Q 022418          118 VACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------------GLA-QHT  181 (297)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------------~~~-~~~  181 (297)
                      ...  .   .....++..+.+++|+.++..+++++...    +..++|++||.....+               ..+ ...
T Consensus        59 ~~~--~---~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         59 KVG--G---IHANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eec--c---cchhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            642  1   01112234567889999999999998652    3457999988643211               111 224


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH----H--------HhcCCCCCC
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL----V--------YSTGVLEGT  249 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~  249 (297)
                      |+.+|.+.+.+.+.+..+   .++++..++|+.++++.......  ........+..+    .        .+.....+.
T Consensus       130 Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFHPE--NSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCCC--CCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            999999999988887666   57999999999999985310000  000000000000    0        111122257


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCC
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      +++++|++++++.+++...   .+..+++.+|......+.+.
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s~~e~~~  243 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVTIKELAE  243 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCcccHHHHHH
Confidence            8999999999999986532   34567888887765544443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.74  E-value=4.2e-17  Score=143.93  Aligned_cols=204  Identities=15%  Similarity=0.047  Sum_probs=140.0

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +++||||+|+||.+++++|.++|++|++++|+                  .+|+.+++++.++++..     ++|++||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~-----~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTDPEALERLLRAI-----RPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCCHHHHHHHHHhC-----CCCEEEEC
Confidence            37999999999999999999999999999885                  46999999999888753     68999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccchh
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYSV  184 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~  184 (297)
                      ||...  .    +......+..+++|+.++..+++++..    .+ .++|++||.....+           ..+...|+.
T Consensus        58 a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~  126 (287)
T TIGR01214        58 AAYTD--V----DGAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQ  126 (287)
T ss_pred             Ccccc--c----cccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhH
Confidence            99652  1    112234567889999999999998754    22 37999998643211           113457999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh-hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM-EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +|.+.|.+++.+       +.+++.++|+.+.++... ................. ...  .....+++.+|+|+++..+
T Consensus       127 ~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~v~v~Dva~a~~~~  196 (287)
T TIGR01214       127 SKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELR-VVD--DQIGSPTYAKDLARVIAAL  196 (287)
T ss_pred             HHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCce-Eec--CCCcCCcCHHHHHHHHHHH
Confidence            999999888764       457899999999987631 11111110000000000 000  0124568899999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +....  .-+.++++.++....
T Consensus       197 ~~~~~--~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       197 LQRLA--RARGVYHLANSGQCS  216 (287)
T ss_pred             Hhhcc--CCCCeEEEECCCCcC
Confidence            86541  135677776554443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=3.3e-17  Score=152.54  Aligned_cols=224  Identities=17%  Similarity=0.155  Sum_probs=149.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      -+.++++||||+|+||++++++|.++|++|++++|............  ..++.++..|+.+..     +       .++
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCC
Confidence            45578999999999999999999999999999998643222111111  235677888887642     1       158


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---------------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---------------  174 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---------------  174 (297)
                      |+|||+|+...  ...    ...+..+.+++|+.++..++.++...    + .++|++||.....               
T Consensus       186 D~ViHlAa~~~--~~~----~~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~  254 (436)
T PLN02166        186 DQIYHLACPAS--PVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNV  254 (436)
T ss_pred             CEEEECceecc--chh----hccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccC
Confidence            99999998652  111    11234688999999999999988653    2 3799998865321               


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh----hHHHHhhcCC-CHHHHHHHHHhcCCCCC
Q 022418          175 -GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM----EEMSQIYAGV-DASRLLELVYSTGVLEG  248 (297)
Q Consensus       175 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (297)
                       +..+...|+.+|.+.|.+++.+.+.   .++++..++|+.++++...    .......... ....+  ...+.....+
T Consensus       255 ~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i--~v~g~g~~~r  329 (436)
T PLN02166        255 NPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPM--TVYGDGKQTR  329 (436)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCc--EEeCCCCeEE
Confidence             1112356999999999999988665   5799999999999997532    1111100000 00000  0111111235


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      .+++++|+++++..++...    .+.++++.+|......
T Consensus       330 dfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~~Si~  364 (436)
T PLN02166        330 SFQYVSDLVDGLVALMEGE----HVGPFNLGNPGEFTML  364 (436)
T ss_pred             eeEEHHHHHHHHHHHHhcC----CCceEEeCCCCcEeHH
Confidence            6899999999999988643    2358999777655433

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.73  E-value=1.2e-16  Score=147.15  Aligned_cols=224  Identities=13%  Similarity=0.143  Sum_probs=151.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH-----HHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ-----TAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-----~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..++++++||||||+||++++++|+++|++|++++|+.++...     ........+.++.+|++|++++.++++..   
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---
Confidence            3567899999999999999999999999999999998764321     01111346889999999999999888753   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      .+++|+||||++..  ...         ..+.+++|+.++..+++++..    .+..++|++||.....   +...|..+
T Consensus       134 ~~~~D~Vi~~aa~~--~~~---------~~~~~~vn~~~~~~ll~aa~~----~gv~r~V~iSS~~v~~---p~~~~~~s  195 (390)
T PLN02657        134 GDPVDVVVSCLASR--TGG---------VKDSWKIDYQATKNSLDAGRE----VGAKHFVLLSAICVQK---PLLEFQRA  195 (390)
T ss_pred             CCCCcEEEECCccC--CCC---------CccchhhHHHHHHHHHHHHHH----cCCCEEEEEeeccccC---cchHHHHH
Confidence            12699999999853  111         012356788888888887753    3456899999986542   34568889


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE-GTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dia~~~~~l~  264 (297)
                      |...+...+.     ...+++...++|+.+..++.. .......+   ..+  ...+..... ..+++.+|+|+++..++
T Consensus       196 K~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-~~~~~~~g---~~~--~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        196 KLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-QVEIVKDG---GPY--VMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-HHHhhccC---Cce--EEecCCcccccCceeHHHHHHHHHHHH
Confidence            9888876654     236899999999888764322 11110000   000  011111111 13588999999999888


Q ss_pred             cCCCCcccccEEEecC-CcccccCC
Q 022418          265 SDDAKYVSGHNLVVDG-GFTSFKNL  288 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdg-G~~~~~~~  288 (297)
                      .+..  ..|+++++.| |..+.-.+
T Consensus       265 ~~~~--~~~~~~~Iggp~~~~S~~E  287 (390)
T PLN02657        265 LDES--KINKVLPIGGPGKALTPLE  287 (390)
T ss_pred             hCcc--ccCCEEEcCCCCcccCHHH
Confidence            6432  3578999977 44544333

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=2.5e-16  Score=140.48  Aligned_cols=218  Identities=20%  Similarity=0.241  Sum_probs=151.8

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      .+|||||+|+||.+++++|.++|+.|.+++|.........    ..+.++.+|+++.+...+..+..     + |++||+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~-----~-d~vih~   71 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAKGV-----P-DAVIHL   71 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHhcC-----C-CEEEEc
Confidence            4999999999999999999999999999999876544332    35788899999985555555422     2 999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-------------CCCccc
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-------------LAQHTY  182 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-------------~~~~~Y  182 (297)
                      |+......   ...+  ...+.+.+|+.++.++++++..    .+..++|+.||.....+.             .+...|
T Consensus        72 aa~~~~~~---~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Y  142 (314)
T COG0451          72 AAQSSVPD---SNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPY  142 (314)
T ss_pred             cccCchhh---hhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHH
Confidence            99773111   0111  4567999999999999999876    345678886654433321             111249


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC--------CCCCCCCCHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG--------VLEGTHCEPN  254 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  254 (297)
                      +.+|...|.+++..+.   ..++.+..++|+.++++........   ...............        ...+.+++.+
T Consensus       143 g~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         143 GVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSS---GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             HHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCc---CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence            9999999999999888   3789999999999998865432110   000111111111110        1112478899


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      |+++++..+++....   + .+++.++.
T Consensus       217 D~a~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         217 DVADALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence            999999999986533   2 88888775

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.71  E-value=2.5e-16  Score=141.25  Aligned_cols=215  Identities=11%  Similarity=0.049  Sum_probs=145.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||||.||++++++|.++|++|.+++|+.+......   ...+.++.+|++|++++.++++       ++|++||
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~   70 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSLPETLPPSFK-------GVTAIID   70 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCCHHHHHHHHC-------CCCEEEE
Confidence            47999999999999999999999999999999875443222   1357889999999998877775       5899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      .++..  ..         +.....++|+.++.++++++..    .+-.++|++||..+.. . +...|..+|...|.+.+
T Consensus        71 ~~~~~--~~---------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         71 ASTSR--PS---------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             CCCCC--CC---------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc-c-CCChHHHHHHHHHHHHH
Confidence            87633  11         1234566788888888888764    3445899998864431 1 23467888888776543


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH  274 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~  274 (297)
                             ..++++..++|+.+...+.........   ...   ............+++++|+|+++..++....  ..|+
T Consensus       134 -------~~~l~~tilRp~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~  198 (317)
T CHL00194        134 -------KSGIPYTIFRLAGFFQGLISQYAIPIL---EKQ---PIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNK  198 (317)
T ss_pred             -------HcCCCeEEEeecHHhhhhhhhhhhhhc---cCC---ceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCc
Confidence                   257899999998665432211110000   000   0000111122467889999999999986542  2589


Q ss_pred             EEEecCCcccccCCCCC
Q 022418          275 NLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       275 ~i~vdgG~~~~~~~~~~  291 (297)
                      ++++.|+....-++.+.
T Consensus       199 ~~ni~g~~~~s~~el~~  215 (317)
T CHL00194        199 TFPLVGPKSWNSSEIIS  215 (317)
T ss_pred             EEEecCCCccCHHHHHH
Confidence            99999987766555443

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.71  E-value=7.7e-17  Score=143.97  Aligned_cols=228  Identities=13%  Similarity=0.058  Sum_probs=148.9

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           37 ALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +|||||+|+||.+++++|.++|+ .|++++|..... .. .+..  ...+..|+++.+.++.+.+.   .+.++|++||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA--DLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh--heeeeccCcchhHHHHHHhh---ccCCCCEEEEC
Confidence            68999999999999999999998 688887754321 11 1111  13456788887766655542   23589999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccchh
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYSV  184 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~  184 (297)
                      |+...        .+.++....+++|+.++..+++++...    + .++|++||......           ..+...|+.
T Consensus        74 A~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        74 GACSD--------TTETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             ccccC--------ccccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            98641        122345778899999999999988652    2 47999998653210           124568999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH-------------hcCCCCCCCC
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY-------------STGVLEGTHC  251 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~  251 (297)
                      +|.+.|.+++....+. ..++++..++|+.++++......  ...............             +.....+.++
T Consensus       141 sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKG--KMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCC--CcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            9999999998643321 13578999999999987532100  000000000001000             0111224689


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCC
Q 022418          252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       252 ~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      +.+|+++++..++..    ..+.++++.++......+.+.
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s~~e~~~  253 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRARSFNDLAD  253 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCCccHHHHHH
Confidence            999999999999865    245699998887765544433

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.70  E-value=7.4e-17  Score=143.51  Aligned_cols=148  Identities=14%  Similarity=0.079  Sum_probs=112.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++|||||+|.||++++++|.++| +|++++|...              .+..|++|.+.+.++++..     ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSNPEGVAETVRKI-----RPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            479999999999999999999999 7888887531              2357999999998888753     6899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------cCCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GGLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~~~~~~~Y~  183 (297)
                      +|+...  .    +.+.++.+..+.+|+.++.++++++...    + .++|++||...+.           +..+...|+
T Consensus        61 ~Aa~~~--~----~~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg  129 (299)
T PRK09987         61 AAAHTA--V----DKAESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG  129 (299)
T ss_pred             CCccCC--c----chhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHH
Confidence            998762  1    1233345677889999999999988652    2 4799998854321           112445799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV  220 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~  220 (297)
                      .+|.+.|.+++....       +...++|+.++++..
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~~  159 (299)
T PRK09987        130 ETKLAGEKALQEHCA-------KHLIFRTSWVYAGKG  159 (299)
T ss_pred             HHHHHHHHHHHHhCC-------CEEEEecceecCCCC
Confidence            999999998865422       358889999998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-15  Score=144.61  Aligned_cols=229  Identities=15%  Similarity=0.080  Sum_probs=146.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHH--HCCCeEEEEeCCchh--HHHHHHHhC-CCeeEEEecCCCHHHH--HHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFI--SNGAKVVIADIQHQL--GQQTAKELG-PNATFIACDVTKESDV--SDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~--~~G~~Vi~~~r~~~~--~~~~~~~~~-~~v~~~~~D~s~~~~i--~~~~~~~~~~~g  107 (297)
                      |++|||||||+||++++++|+  +.|++|++++|+...  ++......+ .++.++.+|++|++..  ...++.+    .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            479999999999999999999  589999999996532  222222222 5688999999985310  1112222    3


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------  175 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------  175 (297)
                      ++|++||+|+...  .    ..+   ..+..++|+.++..+++++..    .+..++|++||......            
T Consensus        77 ~~D~Vih~Aa~~~--~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYD--L----TAD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeec--C----CCC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchh
Confidence            7899999999652  1    112   355678999999999888754    23468999998765321            


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC-CCHHHHHHH--------HHhcCC
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG-VDASRLLEL--------VYSTGV  245 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~  245 (297)
                       ......|+.+|...|.+.+.      ..++++..++|+.+.++............ .....+...        ......
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence             11234699999999988753      24799999999999886321100000000 000000000        000000


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ....+++++|+++++..++...  ...|+.+++.++......+
T Consensus       218 ~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~s~~e  258 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQRVGD  258 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCCcHHH
Confidence            1134678999999999998643  3478999998876655433

>PRK05865 hypothetical protein; Provisional

Probab=99.63  E-value=2.1e-14  Score=141.62  Aligned_cols=190  Identities=18%  Similarity=0.170  Sum_probs=135.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|+....      ....+.++.+|++|.+++.++++       ++|++||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~-------~vD~VVH   67 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMT-------GADVVAH   67 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            4799999999999999999999999999999975321      12357889999999999888776       5899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      +|+...  .             .+++|+.++.++++++..    .+.+++|++||..              |.+.|.+++
T Consensus        68 lAa~~~--~-------------~~~vNv~GT~nLLeAa~~----~gvkr~V~iSS~~--------------K~aaE~ll~  114 (854)
T PRK05865         68 CAWVRG--R-------------NDHINIDGTANVLKAMAE----TGTGRIVFTSSGH--------------QPRVEQMLA  114 (854)
T ss_pred             CCCccc--c-------------hHHHHHHHHHHHHHHHHH----cCCCeEEEECCcH--------------HHHHHHHHH
Confidence            997541  1             467899999988877654    3456899999853              777776553


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH  274 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~  274 (297)
                          +   +++++..++|+.++++...........      ......+.......+++++|+|+++..++....  ..|.
T Consensus       115 ----~---~gl~~vILRp~~VYGP~~~~~i~~ll~------~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~gg  179 (854)
T PRK05865        115 ----D---CGLEWVAVRCALIFGRNVDNWVQRLFA------LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSG  179 (854)
T ss_pred             ----H---cCCCEEEEEeceEeCCChHHHHHHHhc------CceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCC
Confidence                2   589999999999999864332222110      000001111111358999999999998885331  2456


Q ss_pred             EEEecCCcccc
Q 022418          275 NLVVDGGFTSF  285 (297)
Q Consensus       275 ~i~vdgG~~~~  285 (297)
                      .+++.+|....
T Consensus       180 vyNIgsg~~~S  190 (854)
T PRK05865        180 PVNLAAPGELT  190 (854)
T ss_pred             eEEEECCCccc
Confidence            78888776544

>PLN02996 fatty acyl-CoA reductase

Probab=99.62  E-value=3.9e-15  Score=140.66  Aligned_cols=225  Identities=16%  Similarity=0.127  Sum_probs=147.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchh------HH-HHH---------HHh--------CCCeeE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQL------GQ-QTA---------KEL--------GPNATF   84 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~------~~-~~~---------~~~--------~~~v~~   84 (297)
                      ++||+|+||||||+||..+++.|++.+.   +|++..|..+.      ++ +..         +..        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            7899999999999999999999998653   47777775531      11 110         000        157899


Q ss_pred             EEecCCCH-------HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 022418           85 IACDVTKE-------SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI  157 (297)
Q Consensus        85 ~~~D~s~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  157 (297)
                      +..|++++       +.++++++       .+|+|||+|+...     +.    +..+..+++|+.++..+++++...  
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN-----FD----ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC-----Cc----CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            99999843       33444443       5899999998762     11    245778999999999999988652  


Q ss_pred             CCCCceEEEEecccccccC---------C---------------------------------------------------
Q 022418          158 PRRSGCILCTASVTGLLGG---------L---------------------------------------------------  177 (297)
Q Consensus       158 ~~~~g~iv~vss~~~~~~~---------~---------------------------------------------------  177 (297)
                       .+..++|++||.......         +                                                   
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             123479999886543110         0                                                   


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCH-HHH-HHHHH-------hcCCC
Q 022418          178 --AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA-SRL-LELVY-------STGVL  246 (297)
Q Consensus       178 --~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~-~~~~~-------~~~~~  246 (297)
                        ....|+.||++.|.+++..+     .++.+..++|+.|.++...+.. .-...... ..+ .....       +....
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~-gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~  303 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFP-GWIEGLRTIDSVIVGYGKGKLTCFLADPNS  303 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCC-CcccchhhHHHHHHHhccceEeEEecCCCe
Confidence              01259999999999997542     3799999999999997643311 00000000 011 00111       11122


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCC-CcccccEEEecCC
Q 022418          247 EGTHCEPNDIANAALYLASDDA-KYVSGHNLVVDGG  281 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~-~~~tG~~i~vdgG  281 (297)
                      ...+++++|++++++.++.... ..-.+.++++.+|
T Consensus       304 ~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        304 VLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            3678999999999998876421 1124678999888

>PLN02778 3,5-epimerase/4-reductase

Probab=99.55  E-value=3e-13  Score=120.22  Aligned_cols=201  Identities=13%  Similarity=0.064  Sum_probs=128.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++|||||+|+||++++++|.++|++|+...                     .|+++.+.+...++..     ++|++||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~~~~v~~~l~~~-----~~D~ViH   63 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLENRASLEADIDAV-----KPTHVFN   63 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCCHHHHHHHHHhc-----CCCEEEE
Confidence            7899999999999999999999999986432                     2455666666555532     6899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-c-----------------cC
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-L-----------------GG  176 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~-----------------~~  176 (297)
                      +||...  .. ..+...++..+.+++|+.++..+++++...    + .+.+++||.... .                 +.
T Consensus        64 ~Aa~~~--~~-~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~  135 (298)
T PLN02778         64 AAGVTG--RP-NVDWCESHKVETIRANVVGTLTLADVCRER----G-LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPN  135 (298)
T ss_pred             CCcccC--CC-CchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEecceEeCCCCCCCcccCCCCCcCCCCC
Confidence            999763  11 112234556789999999999999998653    2 235555543211 0                 11


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc--h-hhHHHHhhcCCCHHHHHHHHHhc--CCCCCCCC
Q 022418          177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF--V-MEEMSQIYAGVDASRLLELVYST--GVLEGTHC  251 (297)
Q Consensus       177 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~--~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  251 (297)
                      ++...|+.+|.+.|.+++.++..   .++|+     +++..+.  . ..+...            .....  ....+.++
T Consensus       136 ~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~~~~~fi~~------------~~~~~~~~~~~~s~~  195 (298)
T PLN02778        136 FTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLSNPRNFITK------------ITRYEKVVNIPNSMT  195 (298)
T ss_pred             CCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccccHHHHHHH------------HHcCCCeeEcCCCCE
Confidence            12357999999999999876532   33443     3322211  1 111111            11111  01124578


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCCCC
Q 022418          252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAP  293 (297)
Q Consensus       252 ~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~  293 (297)
                      +.+|++++++.++...   .+ ..+++.+|...+..+.+..+
T Consensus       196 yv~D~v~al~~~l~~~---~~-g~yNigs~~~iS~~el~~~i  233 (298)
T PLN02778        196 ILDELLPISIEMAKRN---LT-GIYNFTNPGVVSHNEILEMY  233 (298)
T ss_pred             EHHHHHHHHHHHHhCC---CC-CeEEeCCCCcccHHHHHHHH
Confidence            9999999999998653   23 48999777776665554433

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.55  E-value=9.7e-14  Score=119.92  Aligned_cols=189  Identities=17%  Similarity=0.134  Sum_probs=138.9

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      .+||||++|-+|.++++.|. .+..|+.++|..                  +|++|++.+.+++++.     ++|++||+
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~-----~PDvVIn~   57 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITDPDAVLEVIRET-----RPDVVINA   57 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccChHHHHHHHHhh-----CCCEEEEC
Confidence            49999999999999999998 778899888865                  6999999999999987     89999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccchh
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTYSV  184 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~  184 (297)
                      |+..      -.|....+.+..+.+|..++.++.+++..     -+..+|++|+-.-+-|.           .|...|+.
T Consensus        58 AAyt------~vD~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~  126 (281)
T COG1091          58 AAYT------AVDKAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGR  126 (281)
T ss_pred             cccc------ccccccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhH
Confidence            9976      23445556789999999999999999854     34689999976654432           24568999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||.+-|..++...       -+...++..++.+....++......-....   +.........+...+.+|+|+++..|+
T Consensus       127 sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~tml~la~~~---~~l~vv~Dq~gsPt~~~dlA~~i~~ll  196 (281)
T COG1091         127 SKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVKTMLRLAKEG---KELKVVDDQYGSPTYTEDLADAILELL  196 (281)
T ss_pred             HHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHHHHHHHhhcC---CceEEECCeeeCCccHHHHHHHHHHHH
Confidence            9999998887643       356677777887765544432211100000   001111112266778999999999998


Q ss_pred             cCCCC
Q 022418          265 SDDAK  269 (297)
Q Consensus       265 ~~~~~  269 (297)
                      .....
T Consensus       197 ~~~~~  201 (281)
T COG1091         197 EKEKE  201 (281)
T ss_pred             hcccc
Confidence            77643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.55  E-value=5.5e-15  Score=130.56  Aligned_cols=201  Identities=17%  Similarity=0.085  Sum_probs=132.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++||||++|.||.++.++|.+.|+.|+.++|+                  ..|++|.+++.++++..     ++|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~-----~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTDPEAVAKLLEAF-----KPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTSHHHHHHHHHHH-------SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCCHHHHHHHHHHh-----CCCeEec
Confidence            589999999999999999999999999999876                  57999999999999877     7999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~  183 (297)
                      +|+..      -.+...++.+..+.+|+.++..+.+.+..     .+.++|++||...+.+.           .+...|+
T Consensus        58 ~aa~~------~~~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG  126 (286)
T PF04321_consen   58 CAAYT------NVDACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG  126 (286)
T ss_dssp             ------------HHHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH
T ss_pred             cceee------cHHhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHH
Confidence            99876      22345567788999999999999999865     34689999997654332           2346899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh------cCCCCCCCCCHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS------TGVLEGTHCEPNDIA  257 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dia  257 (297)
                      .+|...|...+..      . -+...++++++.++....+...         +......      .....+..++.+|+|
T Consensus       127 ~~K~~~E~~v~~~------~-~~~~IlR~~~~~g~~~~~~~~~---------~~~~~~~~~~i~~~~d~~~~p~~~~dlA  190 (286)
T PF04321_consen  127 RSKLEGEQAVRAA------C-PNALILRTSWVYGPSGRNFLRW---------LLRRLRQGEPIKLFDDQYRSPTYVDDLA  190 (286)
T ss_dssp             HHHHHHHHHHHHH--------SSEEEEEE-SEESSSSSSHHHH---------HHHHHHCTSEEEEESSCEE--EEHHHHH
T ss_pred             HHHHHHHHHHHHh------c-CCEEEEecceecccCCCchhhh---------HHHHHhcCCeeEeeCCceeCCEEHHHHH
Confidence            9999999877761      1 1678889999888733322221         1111111      011124567899999


Q ss_pred             HHHHHHhcCCC-CcccccEEEecCCcccc
Q 022418          258 NAALYLASDDA-KYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       258 ~~~~~l~~~~~-~~~tG~~i~vdgG~~~~  285 (297)
                      +.+..++.... ..-...++.+.|....+
T Consensus       191 ~~i~~l~~~~~~~~~~~Giyh~~~~~~~S  219 (286)
T PF04321_consen  191 RVILELIEKNLSGASPWGIYHLSGPERVS  219 (286)
T ss_dssp             HHHHHHHHHHHH-GGG-EEEE---BS-EE
T ss_pred             HHHHHHHHhcccccccceeEEEecCcccC
Confidence            99999997651 11224677776655433

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.52  E-value=3e-13  Score=111.42  Aligned_cols=173  Identities=17%  Similarity=0.141  Sum_probs=122.0

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      |+|+||||.+|+.++++|.++|++|+++.|+.++.++     ..+++++.+|+.|++++.+.++       +.|.+|+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~   68 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAA   68 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhh-------hcchhhhhh
Confidence            6899999999999999999999999999999987776     5789999999999988887776       689999999


Q ss_pred             cCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC---------ccchhhHH
Q 022418          117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ---------HTYSVSKS  187 (297)
Q Consensus       117 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~---------~~Y~~sK~  187 (297)
                      |...  .        +         ..    .++.+...+++.+..++|++|+.......+..         ..|...|.
T Consensus        69 ~~~~--~--------~---------~~----~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   69 GPPP--K--------D---------VD----AAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             HSTT--T--------H---------HH----HHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhc--c--------c---------cc----ccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            8552  1        0         22    23333333333456689999988765543331         24555554


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      ..+.+.       ...+++...++|+.+.++...  .......            ........++.+|+|+++..++.
T Consensus       126 ~~e~~~-------~~~~~~~~ivrp~~~~~~~~~--~~~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  126 EAEEAL-------RESGLNWTIVRPGWIYGNPSR--SYRLIKE------------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHH-------HHSTSEEEEEEESEEEBTTSS--SEEEESS------------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHH-------HhcCCCEEEEECcEeEeCCCc--ceeEEec------------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            444333       235899999999999887522  0000000            11112457899999999998874

...

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.52  E-value=3.6e-13  Score=116.65  Aligned_cols=232  Identities=17%  Similarity=0.168  Sum_probs=152.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~----~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++||||||+|.||.+.+.+|.++|+.|+++|.-...    +.......+  ..+.+++.|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            6899999999999999999999999999999874432    222222233  67999999999999999999876     


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------  176 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------  176 (297)
                      ++|.|+|.|+...      ...+.+...+.++.|+.+++.++..+..+    +-..+|+.||.+ .++.           
T Consensus        77 ~fd~V~Hfa~~~~------vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssat-vYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   77 KFDAVMHFAALAA------VGESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSAT-VYGLPTKVPITEEDP  145 (343)
T ss_pred             CCceEEeehhhhc------cchhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEeccee-eecCcceeeccCcCC
Confidence            6999999999873      22455666899999999999999887653    345577777654 3321           


Q ss_pred             -C-CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccC--cc------hhhHHHHhhcCCCHH----HHHH----
Q 022418          177 -L-AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPT--PF------VMEEMSQIYAGVDAS----RLLE----  238 (297)
Q Consensus       177 -~-~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t--~~------~~~~~~~~~~~~~~~----~~~~----  238 (297)
                       . +...||.+|.++|.........+.   .++..++=..+..  +.      ......+..+ +..+    ..+.    
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~---~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~  221 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG---WKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVV  221 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc---ceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceee
Confidence             1 556899999999999998877743   3444444333222  10      0000001100 0000    0000    


Q ss_pred             ---HHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC-cccccEEEecCCccccc
Q 022418          239 ---LVYSTGVLEGTHCEPNDIANAALYLASDDAK-YVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       239 ---~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~-~~tG~~i~vdgG~~~~~  286 (297)
                         +........+..++.-|.|+....++..... ...| ++++..|.....
T Consensus       222 g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~-i~Nlgtg~g~~V  272 (343)
T KOG1371|consen  222 GRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFG-VYNLGTGKGSSV  272 (343)
T ss_pred             cCcccccCCCeeecceeeEehHHHHHHHhhccccchhee-eEeecCCCCccH
Confidence               0001112235667788999999988876533 2333 777766655543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.52  E-value=6.2e-12  Score=98.33  Aligned_cols=216  Identities=18%  Similarity=0.170  Sum_probs=158.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc--CCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH--NQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~--g~id~  111 (297)
                      -.+|+|-||-|.+|.+|++.|.+.++-|.-+|-.+...       .+.-..+..|-+=.|+-+.+++++-+..  .++|.
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~-------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDa   75 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDA   75 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-------ccceEEecCCcchhHHHHHHHHHHHHhhcccccce
Confidence            35899999999999999999999999998887765321       1112334455555667777777776644  38999


Q ss_pred             EEECccCCCCCCCccCCC-CHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDL-NLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|-||.+.  .++...- -.+.-+-|++-.+.+...-.+.+..+++.  .|-+-....-.+..+.|.+..|+.+|+|++
T Consensus        76 v~CVAGGWA--GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH  151 (236)
T KOG4022|consen   76 VFCVAGGWA--GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAVH  151 (236)
T ss_pred             EEEeecccc--CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHHH
Confidence            999999873  3322211 13445567777788777778888888753  344444444455678889999999999999


Q ss_pred             HHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .++++++.+-.  +.|-.+.+|.|-..||||.++.++...                  .......+.+++..+....+..
T Consensus       152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD------------------fssWTPL~fi~e~flkWtt~~~  213 (236)
T KOG4022|consen  152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD------------------FSSWTPLSFISEHFLKWTTETS  213 (236)
T ss_pred             HHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc------------------ccCcccHHHHHHHHHHHhccCC
Confidence            99999988743  346789999999999999987764310                  1456678999999999988877


Q ss_pred             CcccccEEEe
Q 022418          269 KYVSGHNLVV  278 (297)
Q Consensus       269 ~~~tG~~i~v  278 (297)
                      +--+|..+.+
T Consensus       214 RPssGsLlqi  223 (236)
T KOG4022|consen  214 RPSSGSLLQI  223 (236)
T ss_pred             CCCCCceEEE
Confidence            8788987766

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.50  E-value=5.4e-14  Score=119.25  Aligned_cols=241  Identities=17%  Similarity=0.104  Sum_probs=170.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+|++||||-||--|.-+++.|.++|+.|..+.|..+..+...-++       +.+++...+|++|...+.++++.+   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            3689999999999999999999999999999988754332221011       345888999999999999999988   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-----------c
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-----------L  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-----------~  174 (297)
                        ++|-+.|.|+.+      +...++++.....+++..|+..++.++.-.-  ....++..-||..-+           -
T Consensus        78 --~PdEIYNLaAQS------~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 --QPDEIYNLAAQS------HVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             --Cchhheeccccc------cccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCC
Confidence              899999999876      6668889999999999999999999875533  223555555543321           2


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHc---cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELC---EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC  251 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (297)
                      |+.|.++|+++|.+...++...+..+.   ..||-+|.=+|.-=.|-.+++.-... +............+.....++++
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~av-a~Ik~G~q~~l~lGNldAkRDWG  226 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAV-ARIKLGLQDKLYLGNLDAKRDWG  226 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHH-HHHHccccceEEecccccccccc
Confidence            455778999999999999998877742   23555555455433333333322111 11111111222223344558899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCC
Q 022418          252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       252 ~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      ...|-+++++.++..+    ....+.+-.|.+..+++.++
T Consensus       227 ~A~DYVe~mwlmLQq~----~PddyViATg~t~sVrefv~  262 (345)
T COG1089         227 HAKDYVEAMWLMLQQE----EPDDYVIATGETHSVREFVE  262 (345)
T ss_pred             chHHHHHHHHHHHccC----CCCceEEecCceeeHHHHHH
Confidence            9999999999999776    36788888888877665543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.49  E-value=3.1e-12  Score=111.57  Aligned_cols=248  Identities=14%  Similarity=0.110  Sum_probs=181.4

Q ss_pred             CCEEEEEcC-CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC-----
Q 022418           34 EKVALITGA-ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN-----  107 (297)
Q Consensus        34 ~k~vlVtGa-s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g-----  107 (297)
                      ..+|+|.|. +.-|++.+|..|-++|+-|+++..+.+..+....+...++.....|..++.++...++++.+...     
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            468999996 78999999999999999999999998877766665556688888899888888877777765443     


Q ss_pred             ---------CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC---CCCceEEEEeccccccc
Q 022418          108 ---------QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP---RRSGCILCTASVTGLLG  175 (297)
Q Consensus       108 ---------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~g~iv~vss~~~~~~  175 (297)
                               ++..+|....... +.++++.++.++|.+.++.|+..++..++.++|+++.   ++..-+++.-|+.+...
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                     3556777776655 7788999999999999999999999999999999987   33344444557777888


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHh-h--cC---C--C-----HHHHHHHH
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQI-Y--AG---V--D-----ASRLLELV  240 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~-~--~~---~--~-----~~~~~~~~  240 (297)
                      .|..+.-.....++++|+..|++|+.+.||.|..+..|.++-.....  ..+.. .  .+   +  .     ...+....
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~~~~  241 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYSSIQ  241 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHHHHH
Confidence            88888899999999999999999999999999999999998762211  11100 0  00   0  0     00111111


Q ss_pred             HhcCC---CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          241 YSTGV---LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       241 ~~~~~---~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ....+   ...+--...+.-.++..++.+.   .+|.++.+.-|-..|
T Consensus       242 ~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~---~~~~v~y~G~Gs~~Y  286 (299)
T PF08643_consen  242 SSAIPAGSGRGKGSSLRELHNAVFDALYGS---SKGSVVYVGRGSRIY  286 (299)
T ss_pred             hhccCCCCCCCCCCHHHHHHHHHHHhhcCC---CCCCEEEEcCceeHH
Confidence            11110   0012234667777777777654   278899888887766

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.47  E-value=4.3e-13  Score=119.87  Aligned_cols=231  Identities=18%  Similarity=0.193  Sum_probs=152.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++.+++||||+|++|++++.+|.+.+  ..+.++|.......-..+..   ..++..+.+|+.+..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            56899999999999999999999998  67888888775222222222   5678889999999888877776       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------  176 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------  176 (297)
                      ++ .++|+|...      ..+....+.+..+++|+.++..++.++..    .+-.++|++||.....+.           
T Consensus        76 ~~-~Vvh~aa~~------~~~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASP------VPDFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEecccc------CccccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCC
Confidence            55 667776544      22233345788999999999999888866    456689999997765432           


Q ss_pred             -C--CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCH
Q 022418          177 -L--AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       177 -~--~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                       |  ....|+.||+-.|.+.+..+.   ..+...++++|-.|++|.-+...+............ +..+.......+...
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~-f~~g~~~~~~~~~~~  220 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFL-FKIGDGENLNDFTYG  220 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCce-EEeeccccccceEEe
Confidence             2  224899999999998887654   356899999999999987665443311100000000 000000011223334


Q ss_pred             HHHHHHHHHH---hcCCCCcccccEEEecCCcccc
Q 022418          254 NDIANAALYL---ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       254 ~dia~~~~~l---~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +-+|.+.+..   +.+.....+||.+.++.|.+..
T Consensus       221 ~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  221 ENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             chhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            4333332221   2225567899999998876654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=4.6e-13  Score=113.63  Aligned_cols=210  Identities=20%  Similarity=0.232  Sum_probs=145.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      -+++++++||||+|+||+++|.+|..+|+.|+++|.-..+-.......  ...+..+..|+..+     ++.       .
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------e   91 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------E   91 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------H
Confidence            456799999999999999999999999999999987655433333322  35567777777554     444       3


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------------  175 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------------  175 (297)
                      +|-++|.|....+..  +    .....+.+..|+.++...+..+.+.     ..|+++.|+ +..+|             
T Consensus        92 vD~IyhLAapasp~~--y----~~npvktIktN~igtln~lglakrv-----~aR~l~aST-seVYgdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   92 VDQIYHLAAPASPPH--Y----KYNPVKTIKTNVIGTLNMLGLAKRV-----GARFLLAST-SEVYGDPLVHPQVETYWG  159 (350)
T ss_pred             hhhhhhhccCCCCcc--c----ccCccceeeecchhhHHHHHHHHHh-----CceEEEeec-ccccCCcccCCCcccccc
Confidence            689999998774221  1    1223678899999999988887542     245666654 44433             


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHH---HHHhcCCCCC
Q 022418          176 ----GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE---LVYSTGVLEG  248 (297)
Q Consensus       176 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  248 (297)
                          ..+..+|...|...|.++.+..++   .||.|...++..+++|.+.-...+....+..+....   ..++...+++
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR  236 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR  236 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE
Confidence                224578999999999999999888   899999999999999865322111111111111110   0223345568


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 022418          249 THCEPNDIANAALYLASDD  267 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~  267 (297)
                      .|..++|+++.++.|.+.+
T Consensus       237 SF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  237 SFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             EEEeHHHHHHHHHHHhcCC
Confidence            8899999999999999765

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=1.4e-12  Score=113.05  Aligned_cols=161  Identities=12%  Similarity=0.128  Sum_probs=99.0

Q ss_pred             EEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchh---HHHHHH-------------HhCCCeeEEEecCCCHH-HH-HHH
Q 022418           39 ITGAASGIGKATAAKFISNGA--KVVIADIQHQL---GQQTAK-------------ELGPNATFIACDVTKES-DV-SDA   98 (297)
Q Consensus        39 VtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~---~~~~~~-------------~~~~~v~~~~~D~s~~~-~i-~~~   98 (297)
                      ||||||+||.++.++|++.+.  +|++..|..+.   .+.+.+             ....+++++..|++++. .+ .+.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999997643   222211             12578999999999864 11 122


Q ss_pred             HHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc--cc-
Q 022418           99 VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL--LG-  175 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~--~~-  175 (297)
                      .+.+.+   .+|++||+|+...     +.    ..+.+..++|+.|+..+++.+..    .+..+++++||....  .. 
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~-----~~----~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVN-----FN----APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-S-----BS-----S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-TT
T ss_pred             hhcccc---ccceeeecchhhh-----hc----ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCCCC
Confidence            222222   4799999998762     11    13455788999999999998863    222389999993221  11 


Q ss_pred             -----------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCc
Q 022418          176 -----------------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP  218 (297)
Q Consensus       176 -----------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~  218 (297)
                                       ......|..||...|.+.+..+.+   .|+.+..++||.|.++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence                             011248999999999999988776   5889999999999884

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.44  E-value=3.5e-12  Score=112.55  Aligned_cols=223  Identities=13%  Similarity=0.047  Sum_probs=127.0

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      +|||||+|+||.++++.|+++|++|++++|+.+.......     .  ...|+.. +..       .....++|+|||+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~--~~~~~~~-~~~-------~~~~~~~D~Vvh~a   65 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----E--GYKPWAP-LAE-------SEALEGADAVINLA   65 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----e--eeecccc-cch-------hhhcCCCCEEEECC
Confidence            6899999999999999999999999999998765432110     0  1112222 111       12234799999999


Q ss_pred             cCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC------------CCccchh
Q 022418          117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL------------AQHTYSV  184 (297)
Q Consensus       117 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~------------~~~~Y~~  184 (297)
                      |...  .  ..+.+.+.....+++|+.++..+++++...=  .+...+++.|+. +.++..            +...|+.
T Consensus        66 ~~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~i~~S~~-~~yg~~~~~~~~E~~~~~~~~~~~~  138 (292)
T TIGR01777        66 GEPI--A--DKRWTEERKQEIRDSRIDTTRALVEAIAAAE--QKPKVFISASAV-GYYGTSEDRVFTEEDSPAGDDFLAE  138 (292)
T ss_pred             CCCc--c--cccCCHHHHHHHHhcccHHHHHHHHHHHhcC--CCceEEEEeeeE-EEeCCCCCCCcCcccCCCCCChHHH
Confidence            9642  1  1124445667788999999999998886521  111233334432 222211            1111222


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      .+...+...+    .+.+.++.+..++|+.+.++... ...........  ......+.......+++++|+|+++..++
T Consensus       139 ~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~--~~~~~~g~~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       139 LCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRL--GLGGPLGSGRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             HHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhc--CcccccCCCCcccccEeHHHHHHHHHHHh
Confidence            2323333222    22335799999999999987421 11111000000  00000111222357899999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccCCCCC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      .....   +.++++.++......+.+.
T Consensus       212 ~~~~~---~g~~~~~~~~~~s~~di~~  235 (292)
T TIGR01777       212 ENASI---SGPVNATAPEPVRNKEFAK  235 (292)
T ss_pred             cCccc---CCceEecCCCccCHHHHHH
Confidence            65422   3467787766655444443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=99.43  E-value=7.2e-13  Score=121.75  Aligned_cols=216  Identities=15%  Similarity=0.153  Sum_probs=131.1

Q ss_pred             cCCCCCEEEEE----cCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH-------HHh-CCCeeEEEecCCCHHHHHH
Q 022418           30 RKLEEKVALIT----GAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA-------KEL-GPNATFIACDVTKESDVSD   97 (297)
Q Consensus        30 ~~~~~k~vlVt----Gas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-------~~~-~~~v~~~~~D~s~~~~i~~   97 (297)
                      .....|+|+||    ||+|.||.+++++|+++|++|++++|+........       .++ ...+.++.+|++|   +.+
T Consensus        48 ~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         48 AAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh
Confidence            34556789999    99999999999999999999999999876432211       111 2347888899876   333


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL  177 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~  177 (297)
                      ++.     ..++|+|||+++..           .           .++..+++++.    +.+-.++|++||........
T Consensus       125 ~~~-----~~~~d~Vi~~~~~~-----------~-----------~~~~~ll~aa~----~~gvkr~V~~SS~~vyg~~~  173 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNGKD-----------L-----------DEVEPVADWAK----SPGLKQFLFCSSAGVYKKSD  173 (378)
T ss_pred             hhc-----cCCccEEEeCCCCC-----------H-----------HHHHHHHHHHH----HcCCCEEEEEccHhhcCCCC
Confidence            332     13689999987521           1           12233444443    34456899999875432111


Q ss_pred             --C------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH-HHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          178 --A------QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM-SQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       178 --~------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                        +      ...+. +|...|.+.+       ..++.+..++|+.++++...... .............. ..+......
T Consensus       174 ~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~-~~g~g~~~~  244 (378)
T PLN00016        174 EPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP-IPGSGIQLT  244 (378)
T ss_pred             CCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCcee-ecCCCCeee
Confidence              1      01122 7888776543       25799999999999987532211 00000000000000 001111113


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCC
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      .+++++|+|+++..++....  ..|+++++.++......+.+
T Consensus       245 ~~i~v~Dva~ai~~~l~~~~--~~~~~yni~~~~~~s~~el~  284 (378)
T PLN00016        245 QLGHVKDLASMFALVVGNPK--AAGQIFNIVSDRAVTFDGMA  284 (378)
T ss_pred             ceecHHHHHHHHHHHhcCcc--ccCCEEEecCCCccCHHHHH
Confidence            57899999999999986542  35799999888765544443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.41  E-value=1.7e-12  Score=114.55  Aligned_cols=206  Identities=15%  Similarity=0.113  Sum_probs=126.5

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC-ccEEEE
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ-LDIMYN  114 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~-id~li~  114 (297)
                      +++||||||.+|++++++|.++|++|.++.|+.++..      ...+..+.+|+.|++++.++++.. +.+.. +|.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEE
Confidence            4899999999999999999999999999999987532      124566789999999999888643 22234 899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      +++...         ..  ..        ....++.++    ++.+-.++|++||.....+.       ..+...+.+.+
T Consensus        74 ~~~~~~---------~~--~~--------~~~~~i~aa----~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l~  123 (285)
T TIGR03649        74 VAPPIP---------DL--AP--------PMIKFIDFA----RSKGVRRFVLLSASIIEKGG-------PAMGQVHAHLD  123 (285)
T ss_pred             eCCCCC---------Ch--hH--------HHHHHHHHH----HHcCCCEEEEeeccccCCCC-------chHHHHHHHHH
Confidence            886431         00  00        111233333    33455689999886544331       12322222221


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH  274 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~  274 (297)
                          +  ..++....++|+++..++.........   ....  ............+++++|+|+++..++.++..  .|.
T Consensus       124 ----~--~~gi~~tilRp~~f~~~~~~~~~~~~~---~~~~--~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~  190 (285)
T TIGR03649       124 ----S--LGGVEYTVLRPTWFMENFSEEFHVEAI---RKEN--KIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNT  190 (285)
T ss_pred             ----h--ccCCCEEEEeccHHhhhhccccccccc---ccCC--eEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCC
Confidence                1  138999999999887554211110000   0000  00111111224589999999999999876432  467


Q ss_pred             EEEecCCcccccCCCCC
Q 022418          275 NLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       275 ~i~vdgG~~~~~~~~~~  291 (297)
                      .+++.|+..+...+.+.
T Consensus       191 ~~~l~g~~~~s~~eia~  207 (285)
T TIGR03649       191 DYVVLGPELLTYDDVAE  207 (285)
T ss_pred             eEEeeCCccCCHHHHHH
Confidence            77777776665554443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.39  E-value=7.6e-12  Score=106.29  Aligned_cols=233  Identities=16%  Similarity=0.084  Sum_probs=161.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCch--hHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISN--GAKVVIADIQHQ--LGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~--~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+.|.++||||.|+||...+..++..  .++.+.++.-.-  .+..+.+.. .++..++..|+-+...+..++..     
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----
Confidence            34489999999999999999998875  445544433110  122221111 46789999999998888776653     


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc------------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL------------  174 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~------------  174 (297)
                      .++|.|||.|...      ..+.+.-+.-.....|+.++..|+.++....   +--++|++|+....-            
T Consensus        79 ~~id~vihfaa~t------~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   79 EEIDTVIHFAAQT------HVDRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             CchhhhhhhHhhh------hhhhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccc
Confidence            4899999999876      3455555567788999999999999987654   345799998754321            


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH--HHHhhcCCCHHHHHHHHHhcCCCCCCCCC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE--MSQIYAGVDASRLLELVYSTGVLEGTHCE  252 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (297)
                      ..-|...|+++|+|.|++.+++...   +|+.|..++-+.|++|.....  .++.+.-....... -..+.....+.+++
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~-~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEY-PIHGDGLQTRSYLY  225 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCc-ceecCcccceeeEe
Confidence            1123458999999999999999888   789999999999999965422  11110000000000 01122334477899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          253 PNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++|+++++..++.++ +  .|+++++..-+.+.
T Consensus       226 veD~~ea~~~v~~Kg-~--~geIYNIgtd~e~~  255 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEKG-E--LGEIYNIGTDDEMR  255 (331)
T ss_pred             HHHHHHHHHHHHhcC-C--ccceeeccCcchhh
Confidence            999999999999884 2  69999986555443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.39  E-value=3.6e-11  Score=127.39  Aligned_cols=225  Identities=14%  Similarity=0.077  Sum_probs=143.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC----CeEEEEeCCchhHHH---HHHHh----------CCCeeEEEecCCCHHH-
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG----AKVVIADIQHQLGQQ---TAKEL----------GPNATFIACDVTKESD-   94 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G----~~Vi~~~r~~~~~~~---~~~~~----------~~~v~~~~~D~s~~~~-   94 (297)
                      ..++++|||++|+||.+++++|++++    .+|+...|+.+....   .....          ..++.++.+|++++.- 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999987    788888887543222   11111          2368889999986520 


Q ss_pred             -HHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418           95 -VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus        95 -i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                       -....+++.   ..+|++||+|+...  .    ..+   +......|+.++..+++.+..    .+..+++++||.+..
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~--~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVH--W----VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSAL 1113 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEec--C----ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeec
Confidence             011122221   26899999998652  1    122   344556799999999998754    233479999996543


Q ss_pred             cc----------------------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH
Q 022418          174 LG----------------------------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS  225 (297)
Q Consensus       174 ~~----------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~  225 (297)
                      ..                            ......|+.||.+.|.+++..+.    .|+++..++||.|.++.......
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~ 1189 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATN 1189 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCC
Confidence            10                            00124699999999998876533    48999999999998874321100


Q ss_pred             HhhcCCCHHHHHHHHHh--------cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          226 QIYAGVDASRLLELVYS--------TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       226 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                            ....+......        .......+++++++|++++.++........+.++++.++..
T Consensus      1190 ------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1190 ------TDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             ------chhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence                  01111111111        01112557889999999999986543223445677766643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12320 hypothetical protein; Provisional

Probab=99.38  E-value=4.3e-11  Score=116.12  Aligned_cols=194  Identities=14%  Similarity=0.098  Sum_probs=127.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|.++|++|++++|+....      ....+.++.+|++++. +.+++.       ++|++||
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIH   66 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAG-------EADAVIH   66 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhc-------CCCEEEE
Confidence            4699999999999999999999999999999875421      1246788999999873 433332       6899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      +|+..  ..      .      ...+|+.++.++++++..    .+ .++|++||..+.   +  ..|.    ..|.+.+
T Consensus        67 LAa~~--~~------~------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~----~aE~ll~  118 (699)
T PRK12320         67 LAPVD--TS------A------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYR----QAETLVS  118 (699)
T ss_pred             cCccC--cc------c------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--cccc----HHHHHHH
Confidence            99854  11      0      114799999999988754    23 379999876421   1  1232    2333321


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH  274 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~  274 (297)
                             ..++.+..++|+.++++.......+...    ..... ... ..+ -.+++++|++++++.+++..   .+| 
T Consensus       119 -------~~~~p~~ILR~~nVYGp~~~~~~~r~I~----~~l~~-~~~-~~p-I~vIyVdDvv~alv~al~~~---~~G-  180 (699)
T PRK12320        119 -------TGWAPSLVIRIAPPVGRQLDWMVCRTVA----TLLRS-KVS-ARP-IRVLHLDDLVRFLVLALNTD---RNG-  180 (699)
T ss_pred             -------hcCCCEEEEeCceecCCCCcccHhHHHH----HHHHH-HHc-CCc-eEEEEHHHHHHHHHHHHhCC---CCC-
Confidence                   1357899999999999843321111110    11110 011 111 12469999999999998653   245 


Q ss_pred             EEEecCCcccccCC
Q 022418          275 NLVVDGGFTSFKNL  288 (297)
Q Consensus       275 ~i~vdgG~~~~~~~  288 (297)
                      ++++.||....-.+
T Consensus       181 iyNIG~~~~~Si~e  194 (699)
T PRK12320        181 VVDLATPDTTNVVT  194 (699)
T ss_pred             EEEEeCCCeeEHHH
Confidence            99999997766444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.32  E-value=6.8e-11  Score=116.42  Aligned_cols=201  Identities=13%  Similarity=0.080  Sum_probs=127.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ..|++|||||+|.||+++++.|.++|++|..                     ...|++|.+.+.+.++..     ++|+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---------------------~~~~l~d~~~v~~~i~~~-----~pd~V  432 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY---------------------GKGRLEDRSSLLADIRNV-----KPTHV  432 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe---------------------eccccccHHHHHHHHHhh-----CCCEE
Confidence            4468999999999999999999999988731                     124688888887777654     79999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------c------
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------G------  175 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~------  175 (297)
                      ||+|+.....   ..+...++..+.+++|+.++..+++++...    + .+++++||...+.           +      
T Consensus       433 ih~Aa~~~~~---~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        433 FNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             EECCcccCCC---CCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccccCCCCCcCCC
Confidence            9999976311   123445567889999999999999998752    2 3466665533210           1      


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                       .++...|+.||.+.|.+++.+...   ..+++..+..+....+  .++....... ..        ....+ ....+.+
T Consensus       505 ~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~~~~~~~--~nfv~~~~~~-~~--------~~~vp-~~~~~~~  569 (668)
T PLN02260        505 PNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPISSDLSNP--RNFITKISRY-NK--------VVNIP-NSMTVLD  569 (668)
T ss_pred             CCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEecccCCCCc--cHHHHHHhcc-ce--------eeccC-CCceehh
Confidence             122367999999999999876422   3456655543322221  2222221110 00        00011 3345677


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++..+++.++...    .|.++++.++-..+.
T Consensus       570 ~~~~~~~~l~~~~----~~giyni~~~~~~s~  597 (668)
T PLN02260        570 ELLPISIEMAKRN----LRGIWNFTNPGVVSH  597 (668)
T ss_pred             hHHHHHHHHHHhC----CCceEEecCCCcCcH
Confidence            7777778777532    256888866654443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.31  E-value=4e-10  Score=92.29  Aligned_cols=169  Identities=12%  Similarity=0.041  Sum_probs=116.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||| |+|.++++.|+++|++|++++|+.+..+.....+  ..++.++.+|++|++++.++++...++++++|.+
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            579999998 6777799999999999999999988776665544  3467888999999999999999999989999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |+..=..                        ++-.+..++...=.+.+.-+++.+=+..+..+                 
T Consensus        80 v~~vh~~------------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         80 VAWIHSS------------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEecccc------------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            9666322                        12223333333221222336777654333211                 


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC-CCcc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD-AKYV  271 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~-~~~~  271 (297)
                       +..+..+...++.-.-|..|++-.+-                           ..|.++-+||++.++..+... ..++
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~~---------------------------~~rwlt~~ei~~gv~~~~~~~~~~~~  170 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLEDT---------------------------YSRWLTHEEISDGVIKAIESDADEHV  170 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeCC---------------------------ccccCchHHHHHHHHHHHhcCCCeEE
Confidence             12223333445677778889986542                           167899999999999988754 3344


Q ss_pred             cc
Q 022418          272 SG  273 (297)
Q Consensus       272 tG  273 (297)
                      .|
T Consensus       171 ~g  172 (177)
T PRK08309        171 VG  172 (177)
T ss_pred             EE
Confidence            44

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.31  E-value=1e-10  Score=112.18  Aligned_cols=227  Identities=15%  Similarity=0.092  Sum_probs=138.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchhH---HHHHHHh---------------------CCCee
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQLG---QQTAKEL---------------------GPNAT   83 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~~---~~~~~~~---------------------~~~v~   83 (297)
                      -++||+|+||||||+||..++++|++.+.   +|.+..|..+..   +.+.+++                     ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            37899999999999999999999998764   578887754321   1111111                     24688


Q ss_pred             EEEecCCCHH------HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 022418           84 FIACDVTKES------DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI  157 (297)
Q Consensus        84 ~~~~D~s~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  157 (297)
                      .+..|++++.      ..+.+.+       .+|++||+|+...     +    .+.++..+++|+.++.++++.+...- 
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~-----f----~~~~~~a~~vNV~GT~nLLelA~~~~-  258 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT-----F----DERYDVAIDINTRGPCHLMSFAKKCK-  258 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc-----c----ccCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence            8999999872      2332222       5899999998762     1    13467889999999999999886531 


Q ss_pred             CCCCceEEEEeccccccc---------CCC----------------------------------C---------------
Q 022418          158 PRRSGCILCTASVTGLLG---------GLA----------------------------------Q---------------  179 (297)
Q Consensus       158 ~~~~g~iv~vss~~~~~~---------~~~----------------------------------~---------------  179 (297)
                        ...++|++||......         ++.                                  .               
T Consensus       259 --~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~  336 (605)
T PLN02503        259 --KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDL  336 (605)
T ss_pred             --CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhc
Confidence              2346888887543211         110                                  0               


Q ss_pred             -----------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHh-----
Q 022418          180 -----------HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYS-----  242 (297)
Q Consensus       180 -----------~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~-----  242 (297)
                                 -.|..+|+..|.+++..+     .++.+..++|..|.+....++...... ............+     
T Consensus       337 g~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~  411 (605)
T PLN02503        337 GLERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGF  411 (605)
T ss_pred             ccchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEE
Confidence                       135556665555554221     368999999999966443332111110 0011111111111     


Q ss_pred             --cCCCCCCCCCHHHHHHHHHHHhcCCC--CcccccEEEecCC
Q 022418          243 --TGVLEGTHCEPNDIANAALYLASDDA--KYVSGHNLVVDGG  281 (297)
Q Consensus       243 --~~~~~~~~~~~~dia~~~~~l~~~~~--~~~tG~~i~vdgG  281 (297)
                        .....-..+.+|-++++++..+....  ....+.++++..+
T Consensus       412 ~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        412 LADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             EeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence              11112345889999999988843211  1235789999877

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.27  E-value=2.2e-10  Score=101.75  Aligned_cols=161  Identities=16%  Similarity=0.155  Sum_probs=117.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCch------hHHHHHH-------HhCCCeeEEEecCCCHH------H
Q 022418           35 KVALITGAASGIGKATAAKFISNG-AKVVIADIQHQ------LGQQTAK-------ELGPNATFIACDVTKES------D   94 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~------~~~~~~~-------~~~~~v~~~~~D~s~~~------~   94 (297)
                      +++++|||||++|..+..+|..+- .+|++.-|-++      ++++...       ....++..+..|++.++      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999998888764 48988877554      2233322       11568999999998543      2


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCce-EEEEeccccc
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGC-ILCTASVTGL  173 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~-iv~vss~~~~  173 (297)
                      .+++.+       .+|.+|||+.... +.        ..+.+....|+.|+..+++.+..     ++++ +.+|||++..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn-~v--------~pYs~L~~~NVlGT~evlrLa~~-----gk~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVN-HV--------FPYSELRGANVLGTAEVLRLAAT-----GKPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhc-cc--------CcHHHhcCcchHhHHHHHHHHhc-----CCCceeEEEeeeeec
Confidence            333332       5899999998763 22        22467788999999999998754     3344 8889987754


Q ss_pred             ccC--------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch
Q 022418          174 LGG--------------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV  220 (297)
Q Consensus       174 ~~~--------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~  220 (297)
                      ...                    ..-.+|+-||.+.|.+++.....    |.++..++||++-++..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence            211                    11258999999999988876543    89999999999977644

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=6.2e-10  Score=104.68  Aligned_cols=156  Identities=15%  Similarity=0.153  Sum_probs=114.8

Q ss_pred             EEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccC
Q 022418           39 ITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGV  118 (297)
Q Consensus        39 VtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~  118 (297)
                      |+||++|+|.++++.+...|+.|+.+.+...+..                              .....+++.+++-+-.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~------------------------------~~~~~~~~~~~~d~~~   92 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA------------------------------AGWGDRFGALVFDATG   92 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc------------------------------cCcCCcccEEEEECCC
Confidence            7788899999999999999999998766543100                              0001244544433321


Q ss_pred             CCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHHHHH
Q 022418          119 ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA  198 (297)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  198 (297)
                      .         .+.+++.        +.+.+++.+++.|.  ..|++|+++|.....+   ...|+.+|+++..+++.+++
T Consensus        93 ~---------~~~~~l~--------~~~~~~~~~l~~l~--~~griv~i~s~~~~~~---~~~~~~akaal~gl~rsla~  150 (450)
T PRK08261         93 I---------TDPADLK--------ALYEFFHPVLRSLA--PCGRVVVLGRPPEAAA---DPAAAAAQRALEGFTRSLGK  150 (450)
T ss_pred             C---------CCHHHHH--------HHHHHHHHHHHhcc--CCCEEEEEccccccCC---chHHHHHHHHHHHHHHHHHH
Confidence            1         1122222        33456777778774  4589999998776533   34699999999999999999


Q ss_pred             HHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 022418          199 ELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       199 el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~v  278 (297)
                      |+ +.+|+++.|.|++                                    .+++++++.+.|++++...+++|+.+.+
T Consensus       151 E~-~~gi~v~~i~~~~------------------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~  193 (450)
T PRK08261        151 EL-RRGATAQLVYVAP------------------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRV  193 (450)
T ss_pred             Hh-hcCCEEEEEecCC------------------------------------CCHHHHHHHHHHhcCCccCCccCcEEEe
Confidence            99 6799999998875                                    1478888999999999999999999999


Q ss_pred             cCCcc
Q 022418          279 DGGFT  283 (297)
Q Consensus       279 dgG~~  283 (297)
                      +++..
T Consensus       194 ~~~~~  198 (450)
T PRK08261        194 GAADA  198 (450)
T ss_pred             cCCcc
Confidence            99875

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.15  E-value=6.7e-10  Score=94.58  Aligned_cols=199  Identities=19%  Similarity=0.205  Sum_probs=116.3

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      ++||||||.||++++.+|.+.|+.|+++.|+..+.+....   ..+.       .-+.+.+..+      .++|++||.|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---~~v~-------~~~~~~~~~~------~~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---PNVT-------LWEGLADALT------LGIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---cccc-------ccchhhhccc------CCCCEEEECC
Confidence            5899999999999999999999999999999876443321   1111       1111211111      1699999999


Q ss_pred             cCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH----HHHH
Q 022418          117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA----IIGL  192 (297)
Q Consensus       117 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a----~~~~  192 (297)
                      |-.-  .  -..++.+.=+..++.-+.++-.+...+..   .+...++..-+|..+.++......|......    +..+
T Consensus        65 G~~I--~--~rrWt~~~K~~i~~SRi~~T~~L~e~I~~---~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~l  137 (297)
T COG1090          65 GEPI--A--ERRWTEKQKEEIRQSRINTTEKLVELIAA---SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQL  137 (297)
T ss_pred             CCcc--c--cccCCHHHHHHHHHHHhHHHHHHHHHHHh---ccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHH
Confidence            9652  1  11255555555666666655555554433   1234455556666677776554444333222    3333


Q ss_pred             HHHHHHH---HccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH------hcCCCCCCCCCHHHHHHHHHHH
Q 022418          193 VKSMAAE---LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY------STGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       193 ~~~la~e---l~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++.|-.+   ....|+||+.++-|.|-++--... .+        ....+..      +....--.+++.||.++++.|+
T Consensus       138 c~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL-~~--------m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fl  208 (297)
T COG1090         138 CQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGAL-GK--------MLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFL  208 (297)
T ss_pred             HHHHHHHHhhhhhcCceEEEEEEEEEecCCCcch-hh--------hcchhhhccCCccCCCCceeeeeeHHHHHHHHHHH
Confidence            4443222   123489999999999976421111 00        0011111      1111113468999999999999


Q ss_pred             hcCC
Q 022418          264 ASDD  267 (297)
Q Consensus       264 ~~~~  267 (297)
                      ++..
T Consensus       209 l~~~  212 (297)
T COG1090         209 LENE  212 (297)
T ss_pred             HhCc
Confidence            9764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.04  E-value=1.3e-09  Score=92.96  Aligned_cols=96  Identities=17%  Similarity=0.197  Sum_probs=76.0

Q ss_pred             CCEEEEEcC-CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGA-ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGa-s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.+=.||.. |||||+++|++|+++|++|+++++... +    ..    .....+|+++.++++++++.+.+.++++|++
T Consensus        14 D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----~~----~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        14 DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----KP----EPHPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----cc----ccCCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            345666766 678999999999999999999886321 1    10    0124589999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRI  140 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~  140 (297)
                      |||||+.  ...++.+.+.++|++++..
T Consensus        85 VnnAgv~--d~~~~~~~s~e~~~~~~~~  110 (227)
T TIGR02114        85 IHSMAVS--DYTPVYMTDLEQVQASDNL  110 (227)
T ss_pred             EECCEec--cccchhhCCHHHHhhhcch
Confidence            9999986  4556778889999988554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.96  E-value=6e-09  Score=88.94  Aligned_cols=216  Identities=16%  Similarity=0.170  Sum_probs=141.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++.+|-++-|.||||++|+-++.+|++.|..|++-.|-++..-...+-++  .++.+...|+.|+++|+++++.      
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~------  130 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH------  130 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh------
Confidence            46889999999999999999999999999999999997754332222222  4789999999999999999984      


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                       -+++||.-|--. +.+   ..+++      ++|+.++-.+.+.+..    -+-.++|.+|+..+....  .+-|=-+|+
T Consensus       131 -sNVVINLIGrd~-eTk---nf~f~------Dvn~~~aerlAricke----~GVerfIhvS~Lganv~s--~Sr~LrsK~  193 (391)
T KOG2865|consen  131 -SNVVINLIGRDY-ETK---NFSFE------DVNVHIAERLARICKE----AGVERFIHVSCLGANVKS--PSRMLRSKA  193 (391)
T ss_pred             -CcEEEEeecccc-ccC---Ccccc------cccchHHHHHHHHHHh----hChhheeehhhccccccC--hHHHHHhhh
Confidence             489999999653 222   23333      4666666666665533    456689999998865333  245667777


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcch--hhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +-|.-++.   ++.    ..+.|+|..+++.--  -+.+......+..   .....+.-.--+..+.+-|+|.++...+.
T Consensus       194 ~gE~aVrd---afP----eAtIirPa~iyG~eDrfln~ya~~~rk~~~---~pL~~~GekT~K~PVyV~DVaa~IvnAvk  263 (391)
T KOG2865|consen  194 AGEEAVRD---AFP----EATIIRPADIYGTEDRFLNYYASFWRKFGF---LPLIGKGEKTVKQPVYVVDVAAAIVNAVK  263 (391)
T ss_pred             hhHHHHHh---hCC----cceeechhhhcccchhHHHHHHHHHHhcCc---eeeecCCcceeeccEEEehHHHHHHHhcc
Confidence            76654432   232    356788988877421  1111111110000   00000000011456788999999999998


Q ss_pred             CCCCcccccEEEecC
Q 022418          266 DDAKYVSGHNLVVDG  280 (297)
Q Consensus       266 ~~~~~~tG~~i~vdg  280 (297)
                      ++.+  .|.++..-|
T Consensus       264 Dp~s--~Gktye~vG  276 (391)
T KOG2865|consen  264 DPDS--MGKTYEFVG  276 (391)
T ss_pred             Cccc--cCceeeecC
Confidence            8743  677776644

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.88  E-value=4.7e-09  Score=89.87  Aligned_cols=204  Identities=16%  Similarity=0.166  Sum_probs=118.9

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      |+|+||||.+|+.+++.|.+.+++|.++.|+..+. .+..+..  .++.+.+|+.|++++.++++       ++|.++++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~--g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL--GAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT--TTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc--cceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            68999999999999999999999999999998432 2222333  35677999999999988887       78999988


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC----CCccchhhHHHHHH
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL----AQHTYSVSKSAIIG  191 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~----~~~~Y~~sK~a~~~  191 (297)
                      .+...       +...+           ....+.+++..    .+-.++| .||........    +....-..|..++.
T Consensus        72 ~~~~~-------~~~~~-----------~~~~li~Aa~~----agVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   72 TPPSH-------PSELE-----------QQKNLIDAAKA----AGVKHFV-PSSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             SSCSC-------CCHHH-----------HHHHHHHHHHH----HT-SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             cCcch-------hhhhh-----------hhhhHHHhhhc----cccceEE-EEEecccccccccccccchhhhhhhhhhh
Confidence            87541       11111           12234455543    2334565 45555443211    11122234555544


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhcCCCCc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIANAALYLASDDAKY  270 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dia~~~~~l~~~~~~~  270 (297)
                      +.+.       .+++.+.|+||++............  ....................+. +.+|+|+.+..++.++..+
T Consensus       129 ~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~  199 (233)
T PF05368_consen  129 YLRE-------SGIPYTIIRPGFFMENLLPPFAPVV--DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH  199 (233)
T ss_dssp             HHHH-------CTSEBEEEEE-EEHHHHHTTTHHTT--CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT
T ss_pred             hhhh-------ccccceeccccchhhhhhhhhcccc--cccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh
Confidence            3322       4899999999987654433221100  0000000000000111112343 8899999999999886555


Q ss_pred             ccccEEEecCC
Q 022418          271 VSGHNLVVDGG  281 (297)
Q Consensus       271 ~tG~~i~vdgG  281 (297)
                      -.|..+.+.|.
T Consensus       200 ~~~~~~~~~~~  210 (233)
T PF05368_consen  200 NNGKTIFLAGE  210 (233)
T ss_dssp             TEEEEEEEGGG
T ss_pred             cCCEEEEeCCC
Confidence            47888888663

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.86  E-value=1.9e-08  Score=83.20  Aligned_cols=208  Identities=14%  Similarity=0.127  Sum_probs=125.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           35 KVALITGAASGIGKATAAKFISNGA---KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |+++|||++|=+|++|.+.+.++|.   +.+..+.                  -.+|+++.++.+++++..     ++-.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~e-----kPth   58 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESE-----KPTH   58 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhcc-----CCce
Confidence            7899999999999999999999886   2222222                  136999999999999875     7889


Q ss_pred             EEECccCCCCCCCccCC--CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc----------------
Q 022418          112 MYNNAGVACKTPRSIVD--LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL----------------  173 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~----------------  173 (297)
                      +||.|...+   +.+..  ...+-|...+.+|-    ++++.+..+    +.-++++..|..-+                
T Consensus        59 VIhlAAmVG---Glf~N~~ynldF~r~Nl~ind----NVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh~g  127 (315)
T KOG1431|consen   59 VIHLAAMVG---GLFHNNTYNLDFIRKNLQIND----NVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVHNG  127 (315)
T ss_pred             eeehHhhhc---chhhcCCCchHHHhhcceech----hHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhccC
Confidence            999997653   22222  23455555444443    344444331    21223332222111                


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc----------hhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          174 LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF----------VMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       174 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      .+-+....|+.+|..+.-..++++.+   +|-...++.|-.+.+|-          ....+.+.........-.....+.
T Consensus       128 pphpsN~gYsyAKr~idv~n~aY~~q---hg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGs  204 (315)
T KOG1431|consen  128 PPHPSNFGYSYAKRMIDVQNQAYRQQ---HGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGS  204 (315)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHH---hCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecC
Confidence            11234568999999998888999888   45567777777776652          111111111000000000012233


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ..+.+.++..+|+|++++|++.+..   .=+.|++..|.
T Consensus       205 G~PlRqFiys~DLA~l~i~vlr~Y~---~vEpiils~ge  240 (315)
T KOG1431|consen  205 GSPLRQFIYSDDLADLFIWVLREYE---GVEPIILSVGE  240 (315)
T ss_pred             CChHHHHhhHhHHHHHHHHHHHhhc---CccceEeccCc
Confidence            4455889999999999999997642   33566666665

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.86  E-value=3.3e-07  Score=85.75  Aligned_cols=243  Identities=19%  Similarity=0.220  Sum_probs=148.6

Q ss_pred             CCCccCCCCCEEEEEcCC-CcHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHh-------CCCeeEEEecCCCHHHHH
Q 022418           26 STESRKLEEKVALITGAA-SGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL-------GPNATFIACDVTKESDVS   96 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas-~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~~~~-------~~~v~~~~~D~s~~~~i~   96 (297)
                      ..+...+.+|+++|||++ +-||-+++.+|++.|++|+++..+-++. .++.+.+       +.....+.++.++...++
T Consensus       388 ~p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVd  467 (866)
T COG4982         388 KPNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVD  467 (866)
T ss_pred             CCCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHH
Confidence            355678999999999999 5799999999999999999987765432 2233333       456778899999999999


Q ss_pred             HHHHHHHHHcC--------------CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-C
Q 022418           97 DAVDFTISKHN--------------QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-S  161 (297)
Q Consensus        97 ~~~~~~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~  161 (297)
                      .+++++-++.-              .+|.++-.|.+.  ..+.+.+...+. +..+.+-+.+...++-.+.+.--+++ .
T Consensus       468 AlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~--v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~  544 (866)
T COG4982         468 ALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR--VSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVD  544 (866)
T ss_pred             HHHHHhccccccccCCcceecccccCcceeeecccCC--ccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcc
Confidence            99999955321              367777777655  344455554332 33334434444444444333221221 1


Q ss_pred             ce--EEEEec-ccccccCCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHH
Q 022418          162 GC--ILCTAS-VTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC-EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL  237 (297)
Q Consensus       162 g~--iv~vss-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  237 (297)
                      .|  +|.=.| -.+..+  +-++|+-+|++++.++..|..|-. ..-+.++--..|++.+.....-         ++-+.
T Consensus       545 ~R~hVVLPgSPNrG~FG--gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~---------Ndiiv  613 (866)
T COG4982         545 TRLHVVLPGSPNRGMFG--GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGH---------NDIIV  613 (866)
T ss_pred             cceEEEecCCCCCCccC--CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCC---------cchhH
Confidence            22  222111 112222  335899999999999998877732 1124555566799987654321         11111


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc---cccEEEecCCcccc
Q 022418          238 ELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV---SGHNLVVDGGFTSF  285 (297)
Q Consensus       238 ~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~---tG~~i~vdgG~~~~  285 (297)
                      +...+..   =+..+++|+|.-++-|++.+....   +--..+++||+...
T Consensus       614 ~aiEk~G---V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         614 AAIEKAG---VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             HHHHHhC---ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            1111111   234579999999999988652221   22366778888765

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=3.5e-08  Score=90.69  Aligned_cols=79  Identities=29%  Similarity=0.252  Sum_probs=63.3

Q ss_pred             cCCCCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           30 RKLEEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        30 ~~~~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      .+++||+++||||                ||++|.++|++|+++|++|++++++.+ ++     .  ......+|+++.+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~--~~~~~~~dv~~~~  255 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T--PAGVKRIDVESAQ  255 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C--CCCcEEEccCCHH
Confidence            4689999999999                555999999999999999999998763 11     1  1123468999988


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCC
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      ++.+.++   +.++++|++|||||+.
T Consensus       256 ~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        256 EMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHHH---HhcCCCCEEEEccccc
Confidence            8776665   4578899999999986

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.77  E-value=7.4e-07  Score=77.73  Aligned_cols=200  Identities=15%  Similarity=0.113  Sum_probs=125.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      +.++||||||.+|.+++++|.++|++|.+..|+.+......    ..+.+...|+.++..+...++       ++|.+++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~   69 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAK-------GVDGVLL   69 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhc-------cccEEEE
Confidence            47999999999999999999999999999999998877665    568899999999999888777       6788888


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      ..+..  . ...         ..............+...     ....+++.+|...+...  ....|..+|...|...+
T Consensus        70 i~~~~--~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~e~~l~  130 (275)
T COG0702          70 ISGLL--D-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADAA--SPSALARAKAAVEAALR  130 (275)
T ss_pred             Eeccc--c-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCCC--CccHHHHHHHHHHHHHH
Confidence            88765  1 100         011112222333333322     12345666666555442  33578999988877665


Q ss_pred             HHHHHHccCCcEEEEEe-CCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhcCCCCccc
Q 022418          195 SMAAELCEYGIRINCIS-PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL-EGTHCEPNDIANAALYLASDDAKYVS  272 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dia~~~~~l~~~~~~~~t  272 (297)
                      .       .|+.-..+. ++++...... ........       ......... .-..+..+|++..+...+..+.  ..
T Consensus       131 ~-------sg~~~t~lr~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~  193 (275)
T COG0702         131 S-------SGIPYTTLRRAAFYLGAGAA-FIEAAEAA-------GLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TA  193 (275)
T ss_pred             h-------cCCCeEEEecCeeeeccchh-HHHHHHhh-------CCceecCCCCceeeeEHHHHHHHHHHHhcCCc--cc
Confidence            5       466655555 4444432211 11000000       000000001 1246789999999888886653  46


Q ss_pred             ccEEEecCC
Q 022418          273 GHNLVVDGG  281 (297)
Q Consensus       273 G~~i~vdgG  281 (297)
                      |.++.+.|=
T Consensus       194 ~~~~~l~g~  202 (275)
T COG0702         194 GRTYELAGP  202 (275)
T ss_pred             CcEEEccCC
Confidence            677766553

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.70  E-value=8.6e-08  Score=94.82  Aligned_cols=174  Identities=20%  Similarity=0.203  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchh------HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQL------GQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~------~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..|..+|+||=||.|.+++..|.++|++ +++++|+--+      .-..+++.+.++..--.|++..+...++++... +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            4578999999999999999999999996 7778887532      222334447777777889999999999998765 4


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      .+++..++|.|.+.  .+..+++.+.+.|++.-+-.+.++.++-+.-....-  .-..+|.+||+++-.+..++..|+.+
T Consensus      1846 l~~vGGiFnLA~VL--RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVL--RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             cccccchhhHHHHH--HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccchh
Confidence            57899999999988  777899999999999999999999998776655543  34579999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAI  215 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v  215 (297)
                      ..++|.++..-+.+    |..=.+|..|.+
T Consensus      1922 NS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             hHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999998764433    444445555554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.68  E-value=2.9e-08  Score=83.12  Aligned_cols=239  Identities=15%  Similarity=0.112  Sum_probs=149.0

Q ss_pred             cCCCC-CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH-HHHh--------CCCeeEEEecCCCHHHHHHHH
Q 022418           30 RKLEE-KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT-AKEL--------GPNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        30 ~~~~~-k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~--------~~~v~~~~~D~s~~~~i~~~~   99 (297)
                      ...+. |++||||-+|-=|.-+++-|+.+|+.|..+-|..+..+.. ++++        +......-.|++|...+.+++
T Consensus        23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I  102 (376)
T KOG1372|consen   23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI  102 (376)
T ss_pred             cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence            34555 4999999999999999999999999999887766654433 3443        234556678999999999999


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----  174 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----  174 (297)
                      ..+     +++-+.|.|...  ..    ..+++-.+..-++...|++.++.++...-...+ -++ +-.|.+-.+     
T Consensus       103 ~~i-----kPtEiYnLaAQS--HV----kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-Vrf-YQAstSElyGkv~e  169 (376)
T KOG1372|consen  103 STI-----KPTEVYNLAAQS--HV----KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRF-YQASTSELYGKVQE  169 (376)
T ss_pred             hcc-----Cchhhhhhhhhc--ce----EEEeecccceeeccchhhhhHHHHHHhcCcccc-eeE-EecccHhhcccccC
Confidence            988     788888988876  33    344555577788899999999998876544322 222 222222222     


Q ss_pred             -------cCCCCccchhhHHHHHHHHHHHHHHH---ccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC
Q 022418          175 -------GGLAQHTYSVSKSAIIGLVKSMAAEL---CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG  244 (297)
Q Consensus       175 -------~~~~~~~Y~~sK~a~~~~~~~la~el---~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                             |+-+.++|+++|.+...++-.++..+   +-.||-+|.=+|--=.+-.++..-.... ...-.....+..+..
T Consensus       170 ~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsva-kI~~gqqe~~~LGNL  248 (376)
T KOG1372|consen  170 IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVA-KISLGQQEKIELGNL  248 (376)
T ss_pred             CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHH-HhhhcceeeEEecch
Confidence                   34466899999988665555554443   3346666665553322222222111100 000000111111222


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ...+++++..|-++++|.++..+.    -..+.+--|...++
T Consensus       249 ~a~RDWGhA~dYVEAMW~mLQ~d~----PdDfViATge~hsV  286 (376)
T KOG1372|consen  249 SALRDWGHAGDYVEAMWLMLQQDS----PDDFVIATGEQHSV  286 (376)
T ss_pred             hhhcccchhHHHHHHHHHHHhcCC----CCceEEecCCcccH
Confidence            334789999999999999997652    23444444444443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.59  E-value=2.3e-07  Score=82.13  Aligned_cols=81  Identities=23%  Similarity=0.372  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCc---hhHHHHHHHhC---CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQH---QLGQQTAKELG---PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~---~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++|+++|+|+ ||+|++++..|++.|++ |.+++|+.   ++.++..+++.   ..+....+|+++.+++.+.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            578999999999 69999999999999997 99999997   56666665552   334566789988777765554   


Q ss_pred             HHcCCccEEEECccCC
Q 022418          104 SKHNQLDIMYNNAGVA  119 (297)
Q Consensus       104 ~~~g~id~li~~ag~~  119 (297)
                          ..|++|||....
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                459999998654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.59  E-value=5.8e-07  Score=74.81  Aligned_cols=81  Identities=20%  Similarity=0.351  Sum_probs=66.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++++++|+||+|++|+++++.|++.|++|++++|+.++.++..+.+.  .......+|..+.+++.+.++       
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------
Confidence            47899999999999999999999999999999999999988877766552  134455678888888877665       


Q ss_pred             CccEEEECcc
Q 022418          108 QLDIMYNNAG  117 (297)
Q Consensus       108 ~id~li~~ag  117 (297)
                      +.|++|+...
T Consensus        97 ~~diVi~at~  106 (194)
T cd01078          97 GADVVFAAGA  106 (194)
T ss_pred             cCCEEEECCC
Confidence            5688887664

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.54  E-value=9.3e-07  Score=81.72  Aligned_cols=215  Identities=15%  Similarity=0.134  Sum_probs=130.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchh--HHH-HHHH--------h-------CCCeeEEEecC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQL--GQQ-TAKE--------L-------GPNATFIACDV   89 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~--~~~-~~~~--------~-------~~~v~~~~~D~   89 (297)
                      -++||+++||||||++|+-+++.++.--.   ++.+.-|....  .++ +...        +       -.++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            47899999999999999999999998532   45555554332  111 1111        1       25788888999


Q ss_pred             CCHHH-HHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418           90 TKESD-VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus        90 s~~~~-i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                      ++++- +...-.+..  ...+|++||+|+...         -.+.++-.+.+|..|+..+++.+....+   ...++.+|
T Consensus        89 ~~~~LGis~~D~~~l--~~eV~ivih~AAtvr---------Fde~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVS  154 (467)
T KOG1221|consen   89 SEPDLGISESDLRTL--ADEVNIVIHSAATVR---------FDEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVS  154 (467)
T ss_pred             cCcccCCChHHHHHH--HhcCCEEEEeeeeec---------cchhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEee
Confidence            87652 211111111  126899999998762         2355788999999999999998876543   34588888


Q ss_pred             ccccccc--------CC--------------------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEE
Q 022418          169 SVTGLLG--------GL--------------------------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRIN  208 (297)
Q Consensus       169 s~~~~~~--------~~--------------------------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~  208 (297)
                      ...+...        ++                                .--.|.-+|+..|.+...-     +.+..+.
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~lPiv  229 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AENLPLV  229 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccCCCeE
Confidence            7666511        00                                0025777777766655443     2468899


Q ss_pred             EEeCCCccCcchhhHHHHhhcCCCHH-HHHHH-------HHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          209 CISPFAIPTPFVMEEMSQIYAGVDAS-RLLEL-------VYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       209 ~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      .++|..|.+....++........... .+...       ...........+.+|.++++++...
T Consensus       230 IiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~  293 (467)
T KOG1221|consen  230 IIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASA  293 (467)
T ss_pred             EEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHH
Confidence            99999998865554322211000000 00000       0001112245688999999988544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.49  E-value=7.1e-07  Score=81.81  Aligned_cols=112  Identities=21%  Similarity=0.236  Sum_probs=75.9

Q ss_pred             cCCCCCEEEEEcC---------------CCc-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           30 RKLEEKVALITGA---------------ASG-IGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        30 ~~~~~k~vlVtGa---------------s~g-iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      .+++||+++||||               |+| +|.+++++|..+|++|++++++....      ...  ....+|+++.+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~--~~~~~~v~~~~  252 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPP--GVKSIKVSTAE  252 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCC--CcEEEEeccHH
Confidence            3589999999999               566 99999999999999999988765421      111  23568999998


Q ss_pred             HH-HHHHHHHHHHcCCccEEEECccCCCCCCCccCCCC--HHHHHHHHHHhhhHHHHHHHHHHH
Q 022418           94 DV-SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN--LEVFDQVMRINVRGVVAGIKHSTR  154 (297)
Q Consensus        94 ~i-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~  154 (297)
                      ++ ++++++.   ++++|++|+|||+.  ...+....+  .+...+.+.+|+..+--+++.+..
T Consensus       253 ~~~~~~~~~~---~~~~D~~i~~Aavs--d~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       253 EMLEAALNEL---AKDFDIFISAAAVA--DFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHhh---cccCCEEEEccccc--cccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            88 5555443   46799999999987  222221111  111122345666666666666554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.47  E-value=1.1e-06  Score=75.13  Aligned_cols=100  Identities=20%  Similarity=0.269  Sum_probs=66.6

Q ss_pred             CEEEEEcCCCc-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASG-IGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+....    ......+.++.++  +.   .++.+.+.+.++.+|++|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~----~~~~~~v~~i~v~--s~---~~m~~~l~~~~~~~DivI   86 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK----PEPHPNLSIIEIE--NV---DDLLETLEPLVKDHDVLI   86 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc----CCCCCCeEEEEEe--cH---HHHHHHHHHHhcCCCEEE
Confidence            47778876665 99999999999999999998764311    0011245555543  22   223333333445789999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGV  145 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~  145 (297)
                      ||||+.  ...+....+.+++.+++++|....
T Consensus        87 h~AAvs--d~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         87 HSMAVS--DYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             eCCccC--Cceehhhhhhhhhhhhhhhhhhhc
Confidence            999987  334455567888888888876543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.42  E-value=2.1e-06  Score=77.98  Aligned_cols=77  Identities=25%  Similarity=0.352  Sum_probs=69.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |.+||.|+ |++|+.+|..|++.| .+|++++|+.+++++.......++.+.++|+.|.+++.++++.       .|++|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~-------~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKD-------FDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhc-------CCEEE
Confidence            67899999 999999999999999 7899999999999998887767899999999999999988883       39999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      |++...
T Consensus        74 n~~p~~   79 (389)
T COG1748          74 NAAPPF   79 (389)
T ss_pred             EeCCch
Confidence            998765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.39  E-value=1.5e-05  Score=64.28  Aligned_cols=188  Identities=13%  Similarity=0.060  Sum_probs=121.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |.+.|.||||-.|..+++...++|+.|+.+.||.++....     ..+..++.|+.|++++.+.+.       +.|+||.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~-------g~DaVIs   68 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLA-------GHDAVIS   68 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhc-------CCceEEE
Confidence            5788999999999999999999999999999999876654     346788999999999877766       6799998


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC----------CCccchh
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL----------AQHTYSV  184 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~----------~~~~Y~~  184 (297)
                      .-|..  ...      .+.  ..        ....+++...++..+..|++++.+.++.+-.+          +---|..
T Consensus        69 A~~~~--~~~------~~~--~~--------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~  130 (211)
T COG2910          69 AFGAG--ASD------NDE--LH--------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE  130 (211)
T ss_pred             eccCC--CCC------hhH--HH--------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHH
Confidence            88765  111      111  11        11144455555555677899998877764222          2223455


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +++..+ +...+..+   .++.-+-++|-.+-.|..+  ++.-.      .+.+   ..  .......++.+|-|-+++.
T Consensus       131 A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlg------gD~l---l~--n~~G~SrIS~aDYAiA~lD  195 (211)
T COG2910         131 ALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLG------GDQL---LV--NAKGESRISYADYAIAVLD  195 (211)
T ss_pred             HHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEec------cceE---EE--cCCCceeeeHHHHHHHHHH
Confidence            554433 33444444   5588888999766555322  11100      0000   00  0011356789999999998


Q ss_pred             HhcCC
Q 022418          263 LASDD  267 (297)
Q Consensus       263 l~~~~  267 (297)
                      -++.+
T Consensus       196 e~E~~  200 (211)
T COG2910         196 ELEKP  200 (211)
T ss_pred             HHhcc
Confidence            88766

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.23  E-value=4.5e-06  Score=69.69  Aligned_cols=163  Identities=20%  Similarity=0.316  Sum_probs=108.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHC-CCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISN-GAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~-G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +.+.+.-.+||||+-|-+|..+|+.|-.+ |.. |++.+-......-.  +.+   -++-.|+-|..++++++-.     
T Consensus        39 s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~--~~G---PyIy~DILD~K~L~eIVVn-----  108 (366)
T KOG2774|consen   39 SQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT--DVG---PYIYLDILDQKSLEEIVVN-----  108 (366)
T ss_pred             cccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc--ccC---CchhhhhhccccHHHhhcc-----
Confidence            34666779999999999999999988864 654 66555432211111  112   2455799888888877653     


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-C---------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-G---------  176 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-~---------  176 (297)
                      .+||++||-......       ......--...+|+.|..++++.+..+-      --+|+-|..+..+ .         
T Consensus       109 ~RIdWL~HfSALLSA-------vGE~NVpLA~~VNI~GvHNil~vAa~~k------L~iFVPSTIGAFGPtSPRNPTPdl  175 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSA-------VGETNVPLALQVNIRGVHNILQVAAKHK------LKVFVPSTIGAFGPTSPRNPTPDL  175 (366)
T ss_pred             cccceeeeHHHHHHH-------hcccCCceeeeecchhhhHHHHHHHHcC------eeEeecccccccCCCCCCCCCCCe
Confidence            389999998876521       2223334467899999999999876542      2455555544432 1         


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEe-CCCccC
Q 022418          177 ---LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS-PFAIPT  217 (297)
Q Consensus       177 ---~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~-pG~v~t  217 (297)
                         .+...|+.||.-.|.+-..+...   .|+.+.+++ ||.+..
T Consensus       176 tIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  176 TIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISA  217 (366)
T ss_pred             eeecCceeechhHHHHHHHHHHHHhh---cCccceecccCccccc
Confidence               23468999999999888887666   567666664 666654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.22  E-value=2.8e-05  Score=70.94  Aligned_cols=209  Identities=12%  Similarity=0.073  Sum_probs=120.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-Hh-CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK-EL-GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~-~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...+.++|+|+||||.+|+-+++.|.++|+.|.+.-|+.++.++... .. ......+..|...+.++...+...   .+
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~---~~  151 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEA---VP  151 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhh---cc
Confidence            34667899999999999999999999999999999999988777765 11 122334444555444332222222   11


Q ss_pred             -CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          108 -QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                       ...+++-++|..+...         +..--..+.+.+..++.+++..    -+-.++++++++.+.........+.   
T Consensus       152 ~~~~~v~~~~ggrp~~e---------d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~---  215 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEEE---------DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILL---  215 (411)
T ss_pred             ccceeEEecccCCCCcc---------cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhh---
Confidence             3457777777553221         1112223445567777777733    3456799999888765443322222   


Q ss_pred             HHHHHHHH--HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHH
Q 022418          187 SAIIGLVK--SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT--HCEPNDIANAALY  262 (297)
Q Consensus       187 ~a~~~~~~--~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dia~~~~~  262 (297)
                      .....+..  ...+.+...|+.-..|+||....+........   ....+.   .....    .+  .++-.++|+.+..
T Consensus       216 ~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~---~~~~~~---~~~~~----~~~~~i~r~~vael~~~  285 (411)
T KOG1203|consen  216 LNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVV---VDDEKE---LLTVD----GGAYSISRLDVAELVAK  285 (411)
T ss_pred             hhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceec---ccCccc---ccccc----ccceeeehhhHHHHHHH
Confidence            11122211  22333445789999999988766433211100   000000   00110    22  5677888888888


Q ss_pred             HhcCC
Q 022418          263 LASDD  267 (297)
Q Consensus       263 l~~~~  267 (297)
                      ++-..
T Consensus       286 all~~  290 (411)
T KOG1203|consen  286 ALLNE  290 (411)
T ss_pred             HHhhh
Confidence            77544

>PRK09620 hypothetical protein; Provisional

Probab=98.21  E-value=2.2e-06  Score=73.03  Aligned_cols=82  Identities=21%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCC----------------CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHH
Q 022418           32 LEEKVALITGAA----------------SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV   95 (297)
Q Consensus        32 ~~~k~vlVtGas----------------~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i   95 (297)
                      ++||+|+||+|.                |.+|.++|++|.++|++|+++++........... ...+..+..|.    +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~-~~~~~~V~s~~----d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN-QLELHPFEGII----DL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC-ceeEEEEecHH----HH
Confidence            479999999886                9999999999999999999888643211110000 11223333322    22


Q ss_pred             HHHHHHHHHHcCCccEEEECccCC
Q 022418           96 SDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      .+.++++..+ .++|++||+|+..
T Consensus        76 ~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         76 QDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHhcc-cCCCEEEECcccc
Confidence            2233333221 2689999999986

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.16  E-value=9.4e-06  Score=64.92  Aligned_cols=162  Identities=12%  Similarity=0.076  Sum_probs=105.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +...++++.++|.||||-.|..+.+++.+.+-  +|+++.|+.-...+    ....+.-...|++.-++..   .    .
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a----t~k~v~q~~vDf~Kl~~~a---~----~   80 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA----TDKVVAQVEVDFSKLSQLA---T----N   80 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc----ccceeeeEEechHHHHHHH---h----h
Confidence            34668889999999999999999999999873  69999887532222    1234555567775544333   2    2


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +..+|+++++-|..-...+ .        +..+++.-.=.+.+.+++    ++++..+++.+||.++...+.  ..|--.
T Consensus        81 ~qg~dV~FcaLgTTRgkaG-a--------dgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sSr--FlY~k~  145 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGKAG-A--------DGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSSR--FLYMKM  145 (238)
T ss_pred             hcCCceEEEeecccccccc-c--------CceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCcccc--eeeeec
Confidence            2379999999987621111 1        111111111122233333    346677899999988876644  478888


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM  221 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~  221 (297)
                      |.-+|.-...+..+      ++..++||++..+.+.
T Consensus       146 KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  146 KGEVERDVIELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             cchhhhhhhhcccc------EEEEecCcceeccccc
Confidence            88877655554333      7888999999887654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.15  E-value=9.3e-06  Score=74.92  Aligned_cols=75  Identities=25%  Similarity=0.405  Sum_probs=61.2

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHH-hCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           37 ALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKE-LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+|.|+ |.+|+.+++.|++.+.  +|++.+|+.+++++..++ ...++.+.++|+.|.+++.++++       +.|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999999874  799999999999988876 46789999999999999888887       459999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      |++|..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.14  E-value=1.5e-05  Score=62.30  Aligned_cols=77  Identities=29%  Similarity=0.419  Sum_probs=59.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhC-CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELG-PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++++++|.|+ ||.|++++..|++.|++ |.++.|+.++.+++.+.++ ..+...  ++.+   +.+.+.       
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~~---~~~~~~-------   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLED---LEEALQ-------   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGGG---HCHHHH-------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eHHH---HHHHHh-------
Confidence            3799999999998 99999999999999997 9999999999999988873 233333  3333   223333       


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ..|++|++.+..
T Consensus        75 ~~DivI~aT~~~   86 (135)
T PF01488_consen   75 EADIVINATPSG   86 (135)
T ss_dssp             TESEEEE-SSTT
T ss_pred             hCCeEEEecCCC
Confidence            679999998865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.13  E-value=1.9e-05  Score=74.36  Aligned_cols=77  Identities=25%  Similarity=0.311  Sum_probs=58.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      |++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++ ...+.++..|..+.            ..+
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~   67 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------------FLE   67 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------------Hhh
Confidence            367899999999877 99999999999999999999975 3343333333 12456777787651            124


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      .+|+||+++|..
T Consensus        68 ~~d~vv~~~g~~   79 (450)
T PRK14106         68 GVDLVVVSPGVP   79 (450)
T ss_pred             cCCEEEECCCCC
Confidence            789999999965

>PLN00106 malate dehydrogenase

Probab=98.08  E-value=5.4e-05  Score=67.82  Aligned_cols=150  Identities=17%  Similarity=0.125  Sum_probs=95.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .-..++|.|||++|.+|..++..|+..+.  .++++|.+....+  .-++ +........++++.+++.+.++       
T Consensus        15 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~--a~Dl~~~~~~~~i~~~~~~~d~~~~l~-------   85 (323)
T PLN00106         15 GAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV--AADVSHINTPAQVRGFLGDDQLGDALK-------   85 (323)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee--EchhhhCCcCceEEEEeCCCCHHHHcC-------
Confidence            34557999999999999999999997665  6999998772111  1111 1111122335444434444343       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-------------c
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-------------L  174 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-------------~  174 (297)
                      ..|++|+.||....+     .   +.+.+.+..|+.....+.+.+.++    ...++++++|--..             .
T Consensus        86 ~aDiVVitAG~~~~~-----g---~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~s  153 (323)
T PLN00106         86 GADLVIIPAGVPRKP-----G---MTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKAG  153 (323)
T ss_pred             CCCEEEEeCCCCCCC-----C---CCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHcC
Confidence            789999999975211     1   335777888888777666666553    33345555443332             2


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHc
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELC  201 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~  201 (297)
                      +.++...|+.++.-.+.|-..+++++.
T Consensus       154 ~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        154 VYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CCCcceEEEEecchHHHHHHHHHHHhC
Confidence            355667899988766677888888864

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.96  E-value=4.1e-05  Score=68.77  Aligned_cols=73  Identities=22%  Similarity=0.313  Sum_probs=55.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHC-C-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISN-G-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~-G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++|+++||||+|.||+.++++|+++ | .+++++.|+.+++..+..++.      ..|+.   .+.+       ....
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------~~~i~---~l~~-------~l~~  215 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------GGKIL---SLEE-------ALPE  215 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------cccHH---hHHH-------HHcc
Confidence            799999999999999999999999864 5 479999999888777766542      12222   1222       2246


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|++|+.++..
T Consensus       216 aDiVv~~ts~~  226 (340)
T PRK14982        216 ADIVVWVASMP  226 (340)
T ss_pred             CCEEEECCcCC
Confidence            89999999865

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.88  E-value=0.00011  Score=65.66  Aligned_cols=148  Identities=18%  Similarity=0.093  Sum_probs=91.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +-++.+++.|+|++|.+|..++..++..+  ..++++|+..  .+...-++ +........+.+|+.+..+.++      
T Consensus         4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~------   75 (321)
T PTZ00325          4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTPAKVTGYADGELWEKALR------   75 (321)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcCceEEEecCCCchHHHhC------
Confidence            44667799999999999999999999655  5799999932  22211111 1111233456666544333333      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-------------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-------------  173 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-------------  173 (297)
                       ..|++|+.+|...  .      ..+.+.+.+..|+...-.+.+.+.+    .+..++|+++|--..             
T Consensus        76 -gaDvVVitaG~~~--~------~~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~~~~  142 (321)
T PTZ00325         76 -GADLVLICAGVPR--K------PGMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETLKKA  142 (321)
T ss_pred             -CCCEEEECCCCCC--C------CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhhhhc
Confidence             6899999999752  1      1123567788888877776666655    444567777764322             


Q ss_pred             ccCCCCccchhhHHHHHHH--HHHHHHHH
Q 022418          174 LGGLAQHTYSVSKSAIIGL--VKSMAAEL  200 (297)
Q Consensus       174 ~~~~~~~~Y~~sK~a~~~~--~~~la~el  200 (297)
                      .+.++...|+.+  .++..  -..+++.+
T Consensus       143 sg~p~~~viG~g--~LDs~R~r~~la~~l  169 (321)
T PTZ00325        143 GVYDPRKLFGVT--TLDVVRARKFVAEAL  169 (321)
T ss_pred             cCCChhheeech--hHHHHHHHHHHHHHh
Confidence            234555678886  25553  34455554

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.88  E-value=0.0003  Score=62.33  Aligned_cols=80  Identities=14%  Similarity=0.211  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .+|++++|+|+++++|.++++.+.+.|.+|++++++.++.+.. .+++.+   ..+|..+.+..+++.+..  ...++|.
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~--~~~~~d~  216 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGAD---AVFNYRAEDLADRILAAT--AGQGVDV  216 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEEeCCCcCHHHHHHHHc--CCCceEE
Confidence            3578999999999999999999999999999999988776655 334432   123555544444443322  1236999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +++++|
T Consensus       217 vi~~~~  222 (325)
T cd08253         217 IIEVLA  222 (325)
T ss_pred             EEECCc
Confidence            999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.85  E-value=5e-05  Score=67.18  Aligned_cols=77  Identities=18%  Similarity=0.290  Sum_probs=66.6

Q ss_pred             EEEEEcCCCcHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHHhC-------CCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           36 VALITGAASGIGKATAAKFIS----NGAKVVIADIQHQLGQQTAKELG-------PNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~----~G~~Vi~~~r~~~~~~~~~~~~~-------~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      -++|.||||.-|.-+++++.+    .|..+.+.+||++++++.++..+       .....+.||.+|++++.++.++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            589999999999999999999    78889999999999998887762       12337899999999999998855  


Q ss_pred             HcCCccEEEECccCC
Q 022418          105 KHNQLDIMYNNAGVA  119 (297)
Q Consensus       105 ~~g~id~li~~ag~~  119 (297)
                           .+++|++|..
T Consensus        85 -----~vivN~vGPy   94 (423)
T KOG2733|consen   85 -----RVIVNCVGPY   94 (423)
T ss_pred             -----EEEEeccccc
Confidence                 7899999975

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.73  E-value=0.00015  Score=65.16  Aligned_cols=118  Identities=17%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC-------CeEEEEeCCchh--HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNG-------AKVVIADIQHQL--GQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G-------~~Vi~~~r~~~~--~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      -+++||||+|.+|.+++..|+..+       ..|++++++...  ++...-++.+-......|++...+..+.+      
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l------   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAF------   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHh------
Confidence            368999999999999999999854       589999996531  22111111000001112332222222222      


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                       ...|++||.||....+     ..+.   .+.++.|+.-.-.+.+.+.++-  ...+.++++|.
T Consensus        77 -~~aDiVI~tAG~~~~~-----~~~R---~~l~~~N~~i~~~i~~~i~~~~--~~~~iiivvsN  129 (325)
T cd01336          77 -KDVDVAILVGAMPRKE-----GMER---KDLLKANVKIFKEQGEALDKYA--KKNVKVLVVGN  129 (325)
T ss_pred             -CCCCEEEEeCCcCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecC
Confidence             3789999999976211     1232   5566677764444444443321  12566777765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.67  E-value=0.00025  Score=56.51  Aligned_cols=76  Identities=28%  Similarity=0.366  Sum_probs=56.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++++++|+|+ |++|.++++.|.+.| ..|.+.+|+.+..++..++++...  +..+.++.++.          ....
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~   82 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--IAIAYLDLEEL----------LAEA   82 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--cceeecchhhc----------cccC
Confidence            467899999998 899999999999996 789999999988877776654321  22334443322          2368


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++....
T Consensus        83 Dvvi~~~~~~   92 (155)
T cd01065          83 DLIINTTPVG   92 (155)
T ss_pred             CEEEeCcCCC
Confidence            9999999765

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.64  E-value=0.00043  Score=57.89  Aligned_cols=205  Identities=14%  Similarity=0.047  Sum_probs=120.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+.+-.+.++.|+.+..|.++++.-...|..|.++.|+..  .++.+.-..++.+...|.-...-.....       .++
T Consensus        48 ~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l-------~g~  118 (283)
T KOG4288|consen   48 QDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKL-------SGP  118 (283)
T ss_pred             hhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhh-------cCC
Confidence            3444457899999999999999999999999999999876  3333333456666666654322111111       134


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc-cccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG-LLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~-~~~~~~~~~Y~~sK~a  188 (297)
                      .-++.++|..+            ....+..+|=.......+++.+    .+-.++++||-... ..+..+ ..|=.+|..
T Consensus       119 t~v~e~~ggfg------------n~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~-rGY~~gKR~  181 (283)
T KOG4288|consen  119 TFVYEMMGGFG------------NIILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIP-RGYIEGKRE  181 (283)
T ss_pred             cccHHHhcCcc------------chHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccc-hhhhccchH
Confidence            44444444331            1244555666666666666654    45678999986554 233333 479999988


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH----------hcCCCCCCCCCHHHHHH
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY----------STGVLEGTHCEPNDIAN  258 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~dia~  258 (297)
                      .|.-.      +..++.+=..++||+++....-.-... .-....+.+.....          -..+.....+..+++|.
T Consensus       182 AE~El------l~~~~~rgiilRPGFiyg~R~v~g~~~-pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~  254 (283)
T KOG4288|consen  182 AEAEL------LKKFRFRGIILRPGFIYGTRNVGGIKS-PLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVAL  254 (283)
T ss_pred             HHHHH------HHhcCCCceeeccceeecccccCcccc-cHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHH
Confidence            77522      233456667889999998622111100 00000111111000          01123345688999999


Q ss_pred             HHHHHhcCC
Q 022418          259 AALYLASDD  267 (297)
Q Consensus       259 ~~~~l~~~~  267 (297)
                      +++..++++
T Consensus       255 aal~ai~dp  263 (283)
T KOG4288|consen  255 AALKAIEDP  263 (283)
T ss_pred             HHHHhccCC
Confidence            999999876

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.61  E-value=0.00032  Score=61.81  Aligned_cols=77  Identities=22%  Similarity=0.369  Sum_probs=55.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+..... +..+.    +..+       ....
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~-------~~~~  185 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQE-------ELAD  185 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchh-------cccc
Confidence            3688999999997 999999999999999 6899999999988888776532110 11111    1111       1236


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|++||+....
T Consensus       186 ~DivInaTp~g  196 (278)
T PRK00258        186 FDLIINATSAG  196 (278)
T ss_pred             CCEEEECCcCC
Confidence            79999998754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.54  E-value=0.0021  Score=71.48  Aligned_cols=180  Identities=13%  Similarity=0.109  Sum_probs=115.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .+.++.++|++..++++.+++++|.++|+.|+++...+. .......+...+..+...-.+.+++..+++.+....++++
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1830 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQID 1830 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccccccccccccccccccccchHHHHHHHHhhhccccccc
Confidence            566888999988999999999999999999887743221 1111111111222334444466788888888877778899


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc--------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY--------  182 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y--------  182 (297)
                      .+||..+.............   ....-...+...|.+.|.+.+.+...+.+.++.++...|..+......-        
T Consensus      1831 g~i~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~ 1907 (2582)
T TIGR02813      1831 GFIHLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKA 1907 (2582)
T ss_pred             eEEEeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccccc
Confidence            99998875421010111111   1111113344466777777666655566789999988877665332221        


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFA  214 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~  214 (297)
                      ....+++.+|+|+++.|+....+|...+.|..
T Consensus      1908 ~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1908 ELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             chhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence            23578999999999999987777777777753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.51  E-value=0.00061  Score=56.11  Aligned_cols=77  Identities=25%  Similarity=0.267  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHH
Q 022418           32 LEEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV   95 (297)
Q Consensus        32 ~~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i   95 (297)
                      ++||+||||+|                ||-+|.++|+.+..+|++|+++..... +..     ...+.  ..++.+.++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-----p~~~~--~i~v~sa~em   72 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-----PPGVK--VIRVESAEEM   72 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------TTEE--EEE-SSHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-----cccce--EEEecchhhh
Confidence            57889999987                578999999999999999999988742 111     12333  3445555555


Q ss_pred             HHHHHHHHHHcCCccEEEECccCC
Q 022418           96 SDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      .+.+.+.   ...-|++|++|.+.
T Consensus        73 ~~~~~~~---~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   73 LEAVKEL---LPSADIIIMAAAVS   93 (185)
T ss_dssp             HHHHHHH---GGGGSEEEE-SB--
T ss_pred             hhhhccc---cCcceeEEEecchh
Confidence            5555444   44559999999976

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.49  E-value=0.0019  Score=57.73  Aligned_cols=80  Identities=26%  Similarity=0.344  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+++++|+|+++++|.+++..+...|++|++++++.++.+.. ...+..   ...|..+.+....+.+...  .+++|.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~d~  238 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGAD---YVIDYRKEDFVREVRELTG--KRGVDV  238 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---eEEecCChHHHHHHHHHhC--CCCCcE
Confidence            4578999999999999999999999999999999988766554 333322   2246666555555544332  136999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +++++|
T Consensus       239 ~i~~~g  244 (342)
T cd08266         239 VVEHVG  244 (342)
T ss_pred             EEECCc
Confidence            999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.46  E-value=0.00047  Score=64.88  Aligned_cols=78  Identities=26%  Similarity=0.362  Sum_probs=51.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      |++++|+++|||+++ +|.++++.|+++|++|++.+++........+.+ ...+.+...+  +...+   .+      ..
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------Cc
Confidence            467899999999976 999999999999999999998764333222222 1122222211  12211   11      14


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      +|++|+++|+.
T Consensus        69 ~d~vV~s~gi~   79 (447)
T PRK02472         69 FDLMVKNPGIP   79 (447)
T ss_pred             CCEEEECCCCC
Confidence            89999999986

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.45  E-value=0.00077  Score=64.66  Aligned_cols=49  Identities=35%  Similarity=0.456  Sum_probs=43.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      .++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+.++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            4688999999999 699999999999999999999999888888877653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.44  E-value=0.0017  Score=58.46  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |.++||+||+||+|...+....+.|+.++++..+.++.+ ..++++.+...   |..+++ +.+.+.++... .++|+++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi---~y~~~~-~~~~v~~~t~g-~gvDvv~  216 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI---NYREED-FVEQVRELTGG-KGVDVVL  216 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE---cCCccc-HHHHHHHHcCC-CCceEEE
Confidence            899999999999999999988889988777777777777 66666543222   344433 33333332211 2699999


Q ss_pred             ECccC
Q 022418          114 NNAGV  118 (297)
Q Consensus       114 ~~ag~  118 (297)
                      ...|.
T Consensus       217 D~vG~  221 (326)
T COG0604         217 DTVGG  221 (326)
T ss_pred             ECCCH
Confidence            88874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.43  E-value=0.00074  Score=59.18  Aligned_cols=76  Identities=18%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+...-.....+.   ++.         .....|
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~---------~~~~~D  180 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DEL---------PLHRVD  180 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hhh---------cccCcc
Confidence            356899999999 6999999999999999999999999888877766532111111111   110         113689


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++||+.+..
T Consensus       181 ivInatp~g  189 (270)
T TIGR00507       181 LIINATSAG  189 (270)
T ss_pred             EEEECCCCC
Confidence            999999865

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.34  E-value=0.0014  Score=58.95  Aligned_cols=145  Identities=12%  Similarity=0.034  Sum_probs=88.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCchh--HHHHHHHhCCCeeE----EEecCCCHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA-------KVVIADIQHQL--GQQTAKELGPNATF----IACDVTKESDVSDAVD  100 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~~--~~~~~~~~~~~v~~----~~~D~s~~~~i~~~~~  100 (297)
                      .+++.|+|++|.+|..++..++..|.       .++++|.+++.  ++..+-++.+-...    +...-.+.       +
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~-------~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPN-------V   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcH-------H
Confidence            46899999999999999999998875       69999986542  33222222110000    01111111       1


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEeccccc-----
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGL-----  173 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~-----  173 (297)
                          ....-|++|..||...  . +  ..+.   .+.+..|+.    +++.+.+.+.+..  .+.++++|.-.-.     
T Consensus        75 ----~~~daDivvitaG~~~--k-~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~  138 (322)
T cd01338          75 ----AFKDADWALLVGAKPR--G-P--GMER---ADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALIA  138 (322)
T ss_pred             ----HhCCCCEEEEeCCCCC--C-C--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH
Confidence                1236899999999752  1 1  2233   445666665    4555555554433  5667777642211     


Q ss_pred             ---c-cCCCCccchhhHHHHHHHHHHHHHHHc
Q 022418          174 ---L-GGLAQHTYSVSKSAIIGLVKSMAAELC  201 (297)
Q Consensus       174 ---~-~~~~~~~Y~~sK~a~~~~~~~la~el~  201 (297)
                         . +.+....|+.++.--..|...+++.+.
T Consensus       139 ~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         139 MKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence               2 256667899999888888889988864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.34  E-value=0.00071  Score=58.65  Aligned_cols=76  Identities=12%  Similarity=0.195  Sum_probs=57.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++|+|||+- |+.+++.|.++|++|++..++....+...+.   ....+..+..+.+++.+++++.     ++|++|.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~---g~~~v~~g~l~~~~l~~~l~~~-----~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH---QALTVHTGALDPQELREFLKRH-----SIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc---CCceEEECCCCHHHHHHHHHhc-----CCCEEEE
Confidence            57999999998 9999999999999999999988754443321   1234556777888877777643     7999998


Q ss_pred             CccCC
Q 022418          115 NAGVA  119 (297)
Q Consensus       115 ~ag~~  119 (297)
                      .+...
T Consensus        72 AtHPf   76 (256)
T TIGR00715        72 ATHPF   76 (256)
T ss_pred             cCCHH
Confidence            87543

This enzyme was found to be a monomer by gel filtration.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.31  E-value=0.00046  Score=57.67  Aligned_cols=49  Identities=27%  Similarity=0.458  Sum_probs=43.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+.+++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            457999999999994 8999999999999999999999988877776654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.30  E-value=0.0009  Score=58.98  Aligned_cols=77  Identities=19%  Similarity=0.230  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ....+|-||+|..|.-+|++|+.+|.+-.+.+||..++..+...++.+...+.++.  +..++++.+       +.++|+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~-------~~~VVl   76 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMAS-------RTQVVL   76 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHh-------cceEEE
Confidence            35789999999999999999999999999999999999999999987766665555  666666655       679999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      |++|..
T Consensus        77 ncvGPy   82 (382)
T COG3268          77 NCVGPY   82 (382)
T ss_pred             eccccc
Confidence            999976

>PRK06849 hypothetical protein; Provisional

Probab=97.29  E-value=0.0017  Score=59.93  Aligned_cols=83  Identities=18%  Similarity=0.185  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.|+|||||++..+|.++++.|.+.|++|++++.+........+.. .....+...-.+++...+.+.++.+++ ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            4689999999999999999999999999999999875543332222 222222222334444444444454443 58999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |-...
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            97665

>cd00704 MDH Malate dehydrogenase

Probab=97.26  E-value=0.0036  Score=56.25  Aligned_cols=113  Identities=15%  Similarity=0.105  Sum_probs=67.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHH--H--HHHHHHHH
Q 022418           36 VALITGAASGIGKATAAKFISNGA-------KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV--S--DAVDFTIS  104 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i--~--~~~~~~~~  104 (297)
                      ++.||||+|.+|..++..|+..|.       .++++|++...         ........|+.|....  .  .+.....+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------KALEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------CccceeeeehhhhcccccCCcEEecChHH
Confidence            589999999999999999998653       48999998620         1233444555544200  0  00011122


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC--CCceEEEEec
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR--RSGCILCTAS  169 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~vss  169 (297)
                      .....|++|+.||....+     ..+.   .+.++.|+.    +++.+.+.+.+.  ..+.++++|.
T Consensus        73 ~~~~aDiVVitAG~~~~~-----g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          73 AFKDVDVAILVGAFPRKP-----GMER---ADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HhCCCCEEEEeCCCCCCc-----CCcH---HHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            334789999999975211     1233   445666665    555555555444  3566666653

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.25  E-value=0.0017  Score=58.52  Aligned_cols=81  Identities=19%  Similarity=0.270  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|+|++|++|..++......|++|+.++++.++.+...+.++... .  .|..+.+...+.+.....  +++|+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~i~~~~~--~gvd~  224 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD-A--FNYKEEPDLDAALKRYFP--NGIDI  224 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce-e--EEcCCcccHHHHHHHhCC--CCcEE
Confidence            457899999999999999998888899999999998887666655455421 1  233332233333333321  47999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       225 v~d~~g  230 (338)
T cd08295         225 YFDNVG  230 (338)
T ss_pred             EEECCC
Confidence            998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.23  E-value=0.0019  Score=58.00  Aligned_cols=113  Identities=15%  Similarity=0.110  Sum_probs=68.8

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH-HHH-HH--HHHHH
Q 022418           36 VALITGAASGIGKATAAKFISNGA-------KVVIADIQHQLGQQTAKELGPNATFIACDVTKESD-VSD-AV--DFTIS  104 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~-~~--~~~~~  104 (297)
                      ++.|+|++|.+|..++..|+..+.       .++++|++++.         ........|++|... ... ..  ....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---------~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~   71 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---------KVLEGVVMELMDCAFPLLDGVVPTHDPAV   71 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---------cccceeEeehhcccchhcCceeccCChHH
Confidence            478999999999999999998654       48899986542         113344556665541 100 00  01122


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC--CCceEEEEec
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR--RSGCILCTAS  169 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~vss  169 (297)
                      .....|++|+.||...  .      ..+++.+.+..|+.    +++.+.+.+.+.  ..+.++++|.
T Consensus        72 ~~~~aDiVVitAG~~~--~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        72 AFTDVDVAILVGAFPR--K------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HhCCCCEEEEcCCCCC--C------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            3347899999999752  1      11234667777776    444555555443  3466776664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.19  E-value=0.0021  Score=58.41  Aligned_cols=81  Identities=19%  Similarity=0.268  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|+|++|++|..++......|++|++++++.++.+...++++....   .|..+.+...+.+.....  +++|+
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v---i~~~~~~~~~~~i~~~~~--~gvD~  231 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYKEEPDLDAALKRYFP--EGIDI  231 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE---EECCCcccHHHHHHHHCC--CCcEE
Confidence            3578999999999999999988888999999999888876666545654321   233322233333333321  36899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       232 v~d~vG  237 (348)
T PLN03154        232 YFDNVG  237 (348)
T ss_pred             EEECCC
Confidence            998887

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.19  E-value=0.0019  Score=55.03  Aligned_cols=75  Identities=21%  Similarity=0.340  Sum_probs=58.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHH-HHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDA-VDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~-~~~~~~~~g~id~li  113 (297)
                      |.++|.|+ |-+|..+|+.|.++|++|++++++++..++..... ...+.+.+|-++++.++++ ++       ..|++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-~~~~~v~gd~t~~~~L~~agi~-------~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-LDTHVVIGDATDEDVLEEAGID-------DADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-cceEEEEecCCCHHHHHhcCCC-------cCCEEE
Confidence            46777777 78999999999999999999999999888754421 3578889999998777655 22       568887


Q ss_pred             ECccC
Q 022418          114 NNAGV  118 (297)
Q Consensus       114 ~~ag~  118 (297)
                      ...|.
T Consensus        72 a~t~~   76 (225)
T COG0569          72 AATGN   76 (225)
T ss_pred             EeeCC
Confidence            66553

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.16  E-value=0.0057  Score=53.42  Aligned_cols=104  Identities=16%  Similarity=0.175  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC-CccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN-QLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g-~id~  111 (297)
                      .|.|++|++|+|.+|.-+..--.-+|++|+.++-.+++.+-..++++-+..   .|.-++ ++   .+.+.+..+ .||+
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~---idyk~~-d~---~~~L~~a~P~GIDv  222 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAG---IDYKAE-DF---AQALKEACPKGIDV  222 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCcee---eecCcc-cH---HHHHHHHCCCCeEE
Confidence            389999999999999655444334799999999999998888887754322   244433 33   333333343 7999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      .+-|.|.-                            ++.++++.|.  ..+|++...-++..
T Consensus       223 yfeNVGg~----------------------------v~DAv~~~ln--~~aRi~~CG~IS~Y  254 (340)
T COG2130         223 YFENVGGE----------------------------VLDAVLPLLN--LFARIPVCGAISQY  254 (340)
T ss_pred             EEEcCCch----------------------------HHHHHHHhhc--cccceeeeeehhhc
Confidence            99999843                            3556677663  45778876655543

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.16  E-value=0.0021  Score=56.66  Aligned_cols=79  Identities=11%  Similarity=0.106  Sum_probs=55.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.++.......  +...++....       ....
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~-------~~~~  191 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAI-------EKAA  191 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhc-------ccCC
Confidence            467899999987 9999999999999997 599999999998888876632211111  1111222111       1367


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++||+....
T Consensus       192 DiVInaTp~g  201 (282)
T TIGR01809       192 EVLVSTVPAD  201 (282)
T ss_pred             CEEEECCCCC
Confidence            9999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.15  E-value=0.0057  Score=56.11  Aligned_cols=78  Identities=24%  Similarity=0.288  Sum_probs=58.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .+.+++++|.|+ |.+|+..++.+...|++|++++|+.++++......+..   +..+..+.+.+.+.+.       ..|
T Consensus       164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l~-------~aD  232 (370)
T TIGR00518       164 GVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAVK-------RAD  232 (370)
T ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHHc-------cCC
Confidence            357788999988 89999999999999999999999988777766555432   2235556665555443       579


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|++++..
T Consensus       233 vVI~a~~~~  241 (370)
T TIGR00518       233 LLIGAVLIP  241 (370)
T ss_pred             EEEEccccC
Confidence            999988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0022  Score=56.60  Aligned_cols=47  Identities=26%  Similarity=0.358  Sum_probs=42.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   78 (297)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+++
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l  171 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL  171 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence            578899999998 8899999999999998 6999999999988888766

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.09  E-value=0.0033  Score=55.38  Aligned_cols=47  Identities=26%  Similarity=0.436  Sum_probs=41.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~   78 (297)
                      ++++|+++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            467899999998 9999999999999997 5889999999888887765

>PRK05086 malate dehydrogenase; Provisional

Probab=97.07  E-value=0.0035  Score=56.13  Aligned_cols=102  Identities=25%  Similarity=0.313  Sum_probs=58.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHH-C--CCeEEEEeCCchhHHHHHHHh-C-CCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFIS-N--GAKVVIADIQHQLGQQTAKEL-G-PNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~-~--G~~Vi~~~r~~~~~~~~~~~~-~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |.++|.||+|++|.+++..+.. .  +..+++.+|++.. +...-++ + .....+..  .+.+++.+.+       ...
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~~l-------~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTPAL-------EGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHHHc-------CCC
Confidence            5789999999999999998865 2  4568888887542 1111111 1 11111221  1111221222       368


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR  154 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  154 (297)
                      |++|.++|....+     ..+   -.+.+..|....-.+.+.+.+
T Consensus        71 DiVIitaG~~~~~-----~~~---R~dll~~N~~i~~~ii~~i~~  107 (312)
T PRK05086         71 DVVLISAGVARKP-----GMD---RSDLFNVNAGIVKNLVEKVAK  107 (312)
T ss_pred             CEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHH
Confidence            9999999976311     122   355677777766666665554

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.06  E-value=0.003  Score=56.67  Aligned_cols=80  Identities=18%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+++|+|++|++|..++......|++|++++++.++.+.. ++++... .  .|..+.+...+.++....  +++|+
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~~~~~~--~gvdv  210 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDV-A--FNYKTVKSLEETLKKASP--DGYDC  210 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCE-E--EeccccccHHHHHHHhCC--CCeEE
Confidence            3578999999999999999988888999999999988776655 4455422 1  233332334444443321  36999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       211 v~d~~G  216 (325)
T TIGR02825       211 YFDNVG  216 (325)
T ss_pred             EEECCC
Confidence            998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.06  E-value=0.004  Score=54.98  Aligned_cols=80  Identities=23%  Similarity=0.335  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+++++|+|+++++|.+++..+...|++|++++++.+..+.. ++.+..   ...|..+.+...++.+.. . .+++|.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~-~-~~~~d~  211 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD---VAINYRTEDFAEEVKEAT-G-GRGVDV  211 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC---EEEeCCchhHHHHHHHHh-C-CCCeEE
Confidence            3578999999999999999999999999999999988776655 444432   223444433333333222 1 236999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +++++|
T Consensus       212 vi~~~g  217 (323)
T cd05276         212 ILDMVG  217 (323)
T ss_pred             EEECCc
Confidence            999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.06  E-value=0.022  Score=54.26  Aligned_cols=85  Identities=21%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-------------HHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE-------------SDVSD   97 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-------------~~i~~   97 (297)
                      ...+.+|+|+|+ |.+|...+......|+.|+++|++.++++...+ ++.+.  +..|..+.             +..++
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~--v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEF--LELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeE--EEeccccccccccchhhhcchhHHHH
Confidence            457899999998 899999999999999999999999988776544 65543  22233221             11122


Q ss_pred             HHHHHHHHcCCccEEEECccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~  119 (297)
                      ..+.+.+..+..|++|.++|..
T Consensus       238 ~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCC
Confidence            2222222235699999999975

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.06  E-value=0.0032  Score=56.82  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.+++|+|++|++|..++......|+ +|++++++.++.+...++++... .  .|..+ +++.+.+.++..  +++|++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~-v--i~~~~-~~~~~~i~~~~~--~gvd~v  228 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA-A--INYKT-DNVAERLRELCP--EGVDVY  228 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE-E--EECCC-CCHHHHHHHHCC--CCceEE
Confidence            38999999999999999888888898 79999998887777666565432 2  23322 223333333322  469999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       229 id~~g  233 (345)
T cd08293         229 FDNVG  233 (345)
T ss_pred             EECCC
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.05  E-value=0.046  Score=42.94  Aligned_cols=111  Identities=19%  Similarity=0.229  Sum_probs=70.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++.|+|++|.+|.+++..|...+.  +++++|++++.++...-++     .......... .+.+++           .
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~~-----------~   68 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEAL-----------K   68 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGGG-----------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cccccc-----------c
Confidence            4689999999999999999999864  6999999988766655444     1112211111 333333           2


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                      ..|++|..+|....+     ..+   -.+.++.|+.-.-.+.+.+.++-   ..+.++.+|
T Consensus        69 ~aDivvitag~~~~~-----g~s---R~~ll~~N~~i~~~~~~~i~~~~---p~~~vivvt  118 (141)
T PF00056_consen   69 DADIVVITAGVPRKP-----GMS---RLDLLEANAKIVKEIAKKIAKYA---PDAIVIVVT  118 (141)
T ss_dssp             TESEEEETTSTSSST-----TSS---HHHHHHHHHHHHHHHHHHHHHHS---TTSEEEE-S
T ss_pred             cccEEEEeccccccc-----ccc---HHHHHHHhHhHHHHHHHHHHHhC---CccEEEEeC
Confidence            689999999975211     123   34556777765555555554432   346666665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.01  E-value=0.0033  Score=58.37  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=56.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++|+++|.|+ |++|+.+++.|++.|. +++++.|+.++.+++.++++. ...  .+   .++..+.+       ...
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~~~--~~---~~~l~~~l-------~~a  243 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-ASA--HY---LSELPQLI-------KKA  243 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-CeE--ec---HHHHHHHh-------ccC
Confidence            588999999999 9999999999999996 699999999888888777632 111  11   22333333       357


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++.+..
T Consensus       244 DiVI~aT~a~  253 (414)
T PRK13940        244 DIIIAAVNVL  253 (414)
T ss_pred             CEEEECcCCC
Confidence            9999999854

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.98  E-value=0.025  Score=48.34  Aligned_cols=38  Identities=24%  Similarity=0.439  Sum_probs=32.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|..+++.|+..|. +++++|.+.
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            3578899999998 8999999999999998 588877654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.98  E-value=0.014  Score=50.91  Aligned_cols=38  Identities=16%  Similarity=0.392  Sum_probs=32.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++..|+|.|+ ||+|..+++.|+..|. +++++|.+.
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            4689999999988 8999999999999994 688887653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.94  E-value=0.005  Score=50.42  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=52.2

Q ss_pred             CCCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           25 LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        25 ~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ......++.||++.|.|. |.||+++++.+...|++|+..+|+......... .  .+   .     ..++++++++   
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~--~~---~-----~~~l~ell~~---   91 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-F--GV---E-----YVSLDELLAQ---   91 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-T--TE---E-----ESSHHHHHHH---
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc-c--cc---e-----eeehhhhcch---
Confidence            344557899999999987 999999999999999999999999875442211 1  11   1     1234555654   


Q ss_pred             HcCCccEEEECccCC
Q 022418          105 KHNQLDIMYNNAGVA  119 (297)
Q Consensus       105 ~~g~id~li~~ag~~  119 (297)
                          .|+|++.....
T Consensus        92 ----aDiv~~~~plt  102 (178)
T PF02826_consen   92 ----ADIVSLHLPLT  102 (178)
T ss_dssp             -----SEEEE-SSSS
T ss_pred             ----hhhhhhhhccc
Confidence                48998877654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.92  E-value=0.0044  Score=54.77  Aligned_cols=44  Identities=16%  Similarity=0.181  Sum_probs=39.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT   74 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~   74 (297)
                      .+++||+++|+|. |++|+++++.|...|++|++.+|+.+.....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4789999999999 7799999999999999999999998765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.89  E-value=0.008  Score=54.56  Aligned_cols=82  Identities=21%  Similarity=0.298  Sum_probs=55.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      --+|+.+||.||+||+|.+.++-....|+..+++.++.+.. ++.+.++..   ...|..++ ++.+.++...  .+++|
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd---~vvdy~~~-~~~e~~kk~~--~~~~D  227 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD---EVVDYKDE-NVVELIKKYT--GKGVD  227 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc---EeecCCCH-HHHHHHHhhc--CCCcc
Confidence            46778999999999999999998888995555555555543 444555533   23477773 3333333322  56899


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      +++-+.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999864

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.89  E-value=0.0071  Score=53.99  Aligned_cols=76  Identities=28%  Similarity=0.340  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|+|+++++|.++++.+...|.+|+.+.++.+..+.. ..++.. ..+  |.   +++.+.+.    +..++|+
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~--~~---~~~~~~~~----~~~~~d~  229 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGAD-YVI--DG---SKFSEDVK----KLGGADV  229 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCc-EEE--ec---HHHHHHHH----hccCCCE
Confidence            3578999999999999999999999999999999887765554 333321 111  22   11222222    2237999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +++++|.
T Consensus       230 v~~~~g~  236 (332)
T cd08259         230 VIELVGS  236 (332)
T ss_pred             EEECCCh
Confidence            9999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.89  E-value=0.0045  Score=58.74  Aligned_cols=74  Identities=22%  Similarity=0.285  Sum_probs=54.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+..+...    .+..   +..        .....
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~----~~~~---~~~--------~l~~~  391 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA----FPLE---SLP--------ELHRI  391 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce----echh---Hhc--------ccCCC
Confidence            3578899999996 799999999999999999999999888777766543211    1111   111        12468


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++||+....
T Consensus       392 DiVInatP~g  401 (477)
T PRK09310        392 DIIINCLPPS  401 (477)
T ss_pred             CEEEEcCCCC
Confidence            9999998543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.88  E-value=0.0079  Score=54.42  Aligned_cols=38  Identities=42%  Similarity=0.620  Sum_probs=33.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. +++++|++.
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            4689999999998 8899999999999998 688888864

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.87  E-value=0.0093  Score=45.78  Aligned_cols=77  Identities=18%  Similarity=0.316  Sum_probs=55.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHH-CCCeE-EEEeCCc----------------------hhHHHHHHHhCCCeeEEEecCC
Q 022418           35 KVALITGAASGIGKATAAKFIS-NGAKV-VIADIQH----------------------QLGQQTAKELGPNATFIACDVT   90 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~-~G~~V-i~~~r~~----------------------~~~~~~~~~~~~~v~~~~~D~s   90 (297)
                      ++++|.|++|-+|+.+++.+.+ .+..+ .+++|+.                      +.+++..+.  .+   +..|+|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--~D---VvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--AD---VVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---S---EEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--CC---EEEEcC
Confidence            3689999999999999999999 67774 4456666                      233344333  12   567999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccC
Q 022418           91 KESDVSDAVDFTISKHNQLDIMYNNAGV  118 (297)
Q Consensus        91 ~~~~i~~~~~~~~~~~g~id~li~~ag~  118 (297)
                      .++.+.+.++.+.+.  ++.+++-..|.
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999998877  67788877774

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.84  E-value=0.0047  Score=54.27  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEE-EecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFI-ACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~-~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+.+++.++|.|+ ||-+++++..|++.|. +++++.|+.++.+++++.+......+ ..+..+.+...           
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------
Confidence            4667899999998 8999999999999995 69999999999999888774322111 12222222111           


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ..|++||.....
T Consensus       190 ~~dliINaTp~G  201 (283)
T COG0169         190 EADLLINATPVG  201 (283)
T ss_pred             ccCEEEECCCCC
Confidence            369999998765

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.74  E-value=0.011  Score=52.83  Aligned_cols=109  Identities=19%  Similarity=0.261  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhC-------CCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELG-------PNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~-------~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.|.|+ |++|.+++..|+..|  .++++++++.++.+....++.       ..+...   ..+.+.+          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHHh----------
Confidence            36788896 999999999999999  579999999988776665541       111111   1222211          


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                       ...|++|+.+|....   +  ..+.   .+.++.|..-.-.+.+.+.++   ...+.++++|.
T Consensus        67 -~~aDIVIitag~~~~---~--g~~R---~dll~~N~~i~~~~~~~i~~~---~~~~~vivvsN  118 (306)
T cd05291          67 -KDADIVVITAGAPQK---P--GETR---LDLLEKNAKIMKSIVPKIKAS---GFDGIFLVASN  118 (306)
T ss_pred             -CCCCEEEEccCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEecC
Confidence             368999999997521   1  1233   345566665444444444332   23567777764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.67  E-value=0.035  Score=49.00  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCC-CHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT-KESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|+++-|+|+.| ||.--++.-.+.|.+|++++++..+-++..+.++.....   |.+ |++.++++.+.+   .+.+|.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv---~~~~d~d~~~~~~~~~---dg~~~~  253 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFV---DSTEDPDIMKAIMKTT---DGGIDT  253 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeE---EecCCHHHHHHHHHhh---cCccee
Confidence            899999999977 995444444457999999999998888888888765433   666 777777666654   134455


Q ss_pred             EEEC
Q 022418          112 MYNN  115 (297)
Q Consensus       112 li~~  115 (297)
                      ++|.
T Consensus       254 v~~~  257 (360)
T KOG0023|consen  254 VSNL  257 (360)
T ss_pred             eeec
Confidence            5444

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.67  E-value=0.012  Score=52.11  Aligned_cols=80  Identities=23%  Similarity=0.277  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+++++|+|+++++|.+++..+...|++|+++.++.+..+.. .+.+.+.   ..+..+.+....+.+ ... .+++|.
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~~-~~~-~~~~d~  211 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADI---AINYREEDFVEVVKA-ETG-GKGVDV  211 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE---EEecCchhHHHHHHH-HcC-CCCeEE
Confidence            3578999999999999999999999999999999988766544 4444321   123333333333222 211 136999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +++++|
T Consensus       212 ~i~~~~  217 (325)
T TIGR02824       212 ILDIVG  217 (325)
T ss_pred             EEECCc
Confidence            999886

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.67  E-value=0.01  Score=52.99  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|+||+|++|..++......|++|+++++++++.+...+ ++.. +.  .|..+++ ..+.+.+...  +++|+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~-~v--i~~~~~~-~~~~v~~~~~--~gvd~  214 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFD-AV--FNYKTVS-LEEALKEAAP--DGIDC  214 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC-EE--EeCCCcc-HHHHHHHHCC--CCcEE
Confidence            357899999999999999988888899999999988877665544 5542 12  2333322 2222222221  36899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.64  E-value=0.01  Score=55.51  Aligned_cols=74  Identities=23%  Similarity=0.432  Sum_probs=55.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++.+.++..       ..+.++..+.+       ...
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-------~~~~~~~~~~l-------~~a  243 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-------AIPLDELPEAL-------AEA  243 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-------EeeHHHHHHHh-------ccC
Confidence            478899999987 9999999999999997 7999999998888787776431       11223333322       257


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.+.|..
T Consensus       244 DvVI~aT~s~  253 (423)
T PRK00045        244 DIVISSTGAP  253 (423)
T ss_pred             CEEEECCCCC
Confidence            9999888743

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.63  E-value=0.02  Score=52.83  Aligned_cols=74  Identities=23%  Similarity=0.438  Sum_probs=58.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++++++|.|+ |-+|.-++++|+++|. +|+++.|+.++.++++++++.       +....+++.+.+.       ..
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-------~~~~l~el~~~l~-------~~  239 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-------EAVALEELLEALA-------EA  239 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-------eeecHHHHHHhhh-------hC
Confidence            499999999998 7899999999999995 689999999999999998762       2223344444444       56


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.+.|..
T Consensus       240 DvVissTsa~  249 (414)
T COG0373         240 DVVISSTSAP  249 (414)
T ss_pred             CEEEEecCCC
Confidence            9999888754

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.62  E-value=0.016  Score=51.34  Aligned_cols=49  Identities=16%  Similarity=0.228  Sum_probs=40.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHHhC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH---QLGQQTAKELG   79 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~---~~~~~~~~~~~   79 (297)
                      .++++|+++|.|+ ||-+++++..|+..|. +|.++.|+.   ++.+++.+.++
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            3578999999998 6669999999999997 699999985   46677766653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.62  E-value=0.0099  Score=55.94  Aligned_cols=60  Identities=13%  Similarity=0.219  Sum_probs=47.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   97 (297)
                      |.++|.|+ |.+|+++++.|.++|+.|++++++.+..+...+..  .+.++.+|.++++.+++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL--DVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc--CEEEEEeCCCCHHHHHH
Confidence            46888988 99999999999999999999999998877665422  35566677777655443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.61  E-value=0.012  Score=52.60  Aligned_cols=74  Identities=26%  Similarity=0.460  Sum_probs=55.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++++++++..  ..     +.+++.+.+.       ..
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~--~~-----~~~~~~~~l~-------~a  239 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN--AV-----PLDELLELLN-------EA  239 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe--EE-----eHHHHHHHHh-------cC
Confidence            378999999988 999999999999876 56899999998888888876542  11     2233333332       56


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.+.+..
T Consensus       240 DvVi~at~~~  249 (311)
T cd05213         240 DVVISATGAP  249 (311)
T ss_pred             CEEEECCCCC
Confidence            9999988744

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.58  E-value=0.021  Score=53.25  Aligned_cols=74  Identities=28%  Similarity=0.477  Sum_probs=55.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++..+.++..  .+  +   .++..+.+.       ..
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~--~i--~---~~~l~~~l~-------~a  241 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE--AV--K---FEDLEEYLA-------EA  241 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe--Ee--e---HHHHHHHHh-------hC
Confidence            488899999997 999999999999999 67999999998877777765432  11  1   233333333       57


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.+.+..
T Consensus       242 DvVi~aT~s~  251 (417)
T TIGR01035       242 DIVISSTGAP  251 (417)
T ss_pred             CEEEECCCCC
Confidence            9999987743

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.58  E-value=0.056  Score=51.41  Aligned_cols=85  Identities=22%  Similarity=0.318  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-------------HHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK-------------ESDVSD   97 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-------------~~~i~~   97 (297)
                      ...+.+++|.|+ |.+|...+..+...|+.|++++++.++++.... ++.  .++..|..+             .+..++
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa--~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGA--EFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--eEEeccccccccccccceeecCHHHHHH
Confidence            566789999997 999999999999999999999999987665443 543  333444321             234444


Q ss_pred             HHHHHHHHcCCccEEEECccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~  119 (297)
                      ..+.+.++....|++|+++-+.
T Consensus       237 ~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHhCCCCEEEECcccC
Confidence            4444555566899999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.56  E-value=0.018  Score=48.10  Aligned_cols=37  Identities=32%  Similarity=0.522  Sum_probs=33.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            4789999999996 8999999999999998 68888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.56  E-value=0.015  Score=50.03  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|+|+++ +|.++++.+...|.+|+++++++++.+.. +..+.. .  ..|..+.+....+.   ....+.+|+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~--~~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGAD-H--VIDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCc-e--eccCCcCCHHHHHH---HhcCCCCCE
Confidence            4678999999998 99999999999999999999987765554 333321 1  12333333333333   223357999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +++++|
T Consensus       205 vi~~~~  210 (271)
T cd05188         205 VIDAVG  210 (271)
T ss_pred             EEECCC
Confidence            999887

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK04148 hypothetical protein; Provisional

Probab=96.52  E-value=0.0072  Score=46.83  Aligned_cols=56  Identities=18%  Similarity=0.189  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      +++.+++.|.+  .|.++|..|++.|++|+++|.++...+...+.   .+.++..|+.++.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---CCeEEECcCCCCC
Confidence            56789999997  77889999999999999999999876666553   4678889998764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.50  E-value=0.0079  Score=48.74  Aligned_cols=40  Identities=23%  Similarity=0.360  Sum_probs=36.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .++.||+++|.|++..+|..+++.|.++|++|.++.|+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            4799999999999777899999999999999999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.50  E-value=0.015  Score=43.68  Aligned_cols=71  Identities=21%  Similarity=0.238  Sum_probs=53.6

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+...++   .+.++.+|.++++.++++-      ..+.+.+|...
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~------i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAG------IEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTT------GGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcC------ccccCEEEEcc
Confidence            467777 5899999999999877999999999987777664   3778999999987776542      12678777554


Q ss_pred             c
Q 022418          117 G  117 (297)
Q Consensus       117 g  117 (297)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            3

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.49  E-value=0.02  Score=49.70  Aligned_cols=179  Identities=16%  Similarity=0.112  Sum_probs=101.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHH--HHHHHHHCCCeEEEEe-------C--------CchhHHHHHHHhCCCeeEEEecCCC
Q 022418           29 SRKLEEKVALITGAASGIGKA--TAAKFISNGAKVVIAD-------I--------QHQLGQQTAKELGPNATFIACDVTK   91 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~--ia~~l~~~G~~Vi~~~-------r--------~~~~~~~~~~~~~~~v~~~~~D~s~   91 (297)
                      +..--.|.|||.|+|+|.|.+  ++.+|- .|++-+.+.       +        |....++.++.-+-...-+..|.-+
T Consensus        36 p~~ngPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS  114 (398)
T COG3007          36 PIKNGPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFS  114 (398)
T ss_pred             CccCCCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhh
Confidence            344456899999999998875  344444 455554431       1        2223344444445556677889988


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccCCC-CCCCc-------------------------------cCCCCHHHHHHHHH
Q 022418           92 ESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRS-------------------------------IVDLNLEVFDQVMR  139 (297)
Q Consensus        92 ~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~-------------------------------~~~~~~~~~~~~~~  139 (297)
                      .|--+++++.++..+|++|.+|+.-...- ..++.                               +..-+.+++.+...
T Consensus       115 ~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~  194 (398)
T COG3007         115 DEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA  194 (398)
T ss_pred             HHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH
Confidence            89999999999999999999988754320 00000                               11112333333322


Q ss_pred             HhhhHH---HHHHHHHHHhccCCCCceEEEEecccccccCC--CCccchhhHHHHHHHHHHHHHHHccCCcEEEEE
Q 022418          140 INVRGV---VAGIKHSTRVMIPRRSGCILCTASVTGLLGGL--AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI  210 (297)
Q Consensus       140 ~n~~~~---~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v  210 (297)
                        |.|-   ..++++++..=--....+-+-.|-++.....+  ..+.-+.+|.=++.-++.+...|+..+=..++.
T Consensus       195 --VMGGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vs  268 (398)
T COG3007         195 --VMGGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVS  268 (398)
T ss_pred             --hhCcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeee
Confidence              2221   12344443311111234444444444332222  224568999999999999998888765444333

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.48  E-value=0.015  Score=54.78  Aligned_cols=78  Identities=24%  Similarity=0.198  Sum_probs=54.5

Q ss_pred             cCCCCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           30 RKLEEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        30 ~~~~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      .+++||.+|||+|                ||-+|.++|+++..+|++|+++.-..+. .     ....+..+  ++.+. 
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~-----~p~~v~~i--~V~ta-  322 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL-A-----DPQGVKVI--HVESA-  322 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-C-----CCCCceEE--EecCH-
Confidence            3699999999997                5689999999999999999998754321 0     11223333  33333 


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCC
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                        +++.+.+.+.++ .|++|++|.+.
T Consensus       323 --~eM~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        323 --RQMLAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             --HHHHHHHHhhCC-CCEEEEecccc
Confidence              444444444444 69999999986

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.48  E-value=0.016  Score=51.24  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++++++|+|+++++|.+++..+...|++|+.++++.++.+.. .+.+.. ..+  |.......+.+.+ ... ...+|.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~~d~v  217 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAA-HVI--VTDEEDLVAEVLR-ITG-GKGVDVV  217 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC-EEE--ecCCccHHHHHHH-HhC-CCCceEE
Confidence            578999999999999999999999999999999988766655 334321 222  2222222222222 211 1269999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      ++++|
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            98887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.48  E-value=0.074  Score=47.69  Aligned_cols=113  Identities=18%  Similarity=0.253  Sum_probs=71.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCC------CeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGP------NATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~------~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      |.-+++++.|+|+ |.+|.+++..++..|.  .+.++|++.+.++....++.+      ++.. ..  .+.+.       
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~-------   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD-------   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH-------
Confidence            3456789999998 9999999999999987  699999998877666555421      1111 11  22211       


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEec
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTAS  169 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss  169 (297)
                          +...|++|..||....+     ..+.   .+.++.|..-.-    .+.+.+.+. ..+.++++|.
T Consensus        71 ----~~~adivIitag~~~k~-----g~~R---~dll~~N~~i~~----~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         71 ----CKDADLVVITAGAPQKP-----GETR---LDLVEKNLKIFK----SIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             ----hCCCCEEEEecCCCCCC-----CCCH---HHHHHHHHHHHH----HHHHHHHHhCCCeEEEEccC
Confidence                12679999999975211     1233   344555655433    334444332 3566777664

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.47  E-value=0.016  Score=51.70  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|.|+++++|.+++..+.+.|++|+.++++.++.+...+.++.. .++  |..+.+..+++.+ ...  +++|+
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~v~~-~~~--~~~d~  217 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AAI--NYKTPDLAEALKE-AAP--DGIDV  217 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eEE--ecCChhHHHHHHH-hcc--CCceE
Confidence            35789999999999999999999999999999998887766655435432 122  2333332222222 221  47999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       218 vi~~~g  223 (329)
T cd05288         218 YFDNVG  223 (329)
T ss_pred             EEEcch
Confidence            998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.44  E-value=0.0047  Score=42.39  Aligned_cols=35  Identities=34%  Similarity=0.529  Sum_probs=24.0

Q ss_pred             CC-CEEEEEcCCCcHHHH--HHHHHHHCCCeEEEEeCCc
Q 022418           33 EE-KVALITGAASGIGKA--TAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        33 ~~-k~vlVtGas~giG~~--ia~~l~~~G~~Vi~~~r~~   68 (297)
                      +| |+|||+|+|+|.|.+  ++..| ..|++.+.+....
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            45 899999999999999  66666 6688887776543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.012  Score=51.73  Aligned_cols=40  Identities=25%  Similarity=0.365  Sum_probs=35.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      ..+++||.++|.|+++-.|+.++..|.++|++|+++.|..
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            3579999999999988899999999999999999888743

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.42  E-value=0.021  Score=51.60  Aligned_cols=77  Identities=21%  Similarity=0.371  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|++++|+|+ |++|...+..+...|+ +|+++++++++++.. ++++....   .|..+. ++.+..    ...+.+|
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~-~~~~~~----~~~g~~D  237 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKL---VNPQND-DLDHYK----AEKGYFD  237 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEE---ecCCcc-cHHHHh----ccCCCCC
Confidence            36899999986 9999999988888898 588899998877644 44654322   244332 233222    2235699


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       238 ~vid~~G~  245 (343)
T PRK09880        238 VSFEVSGH  245 (343)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.41  E-value=0.017  Score=51.34  Aligned_cols=71  Identities=20%  Similarity=0.314  Sum_probs=50.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++++++|.|. |++|+.++..|...|++|++++|+.+..+.. +..+.  .++  +   .+++.+.+       ...
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~--~~~--~---~~~l~~~l-------~~a  211 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGL--SPF--H---LSELAEEV-------GKI  211 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCC--eee--c---HHHHHHHh-------CCC
Confidence            4678999999997 7899999999999999999999997764433 33332  211  1   12222222       367


Q ss_pred             cEEEECc
Q 022418          110 DIMYNNA  116 (297)
Q Consensus       110 d~li~~a  116 (297)
                      |++|+..
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999975

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.34  E-value=0.081  Score=49.79  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=50.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      |++.+|+++|+|.+ +.|.++++.|+++|++|++.+.+.... .+..+.....+.+...+.. . .   ..       ..
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-~-~---~~-------~~   67 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-D-A---LD-------NG   67 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-H-H---HH-------hC
Confidence            45778999999985 999999999999999999998765431 1112211112333322211 1 1   11       25


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|.||..+|+.
T Consensus        68 ~d~vv~spgi~   78 (445)
T PRK04308         68 FDILALSPGIS   78 (445)
T ss_pred             CCEEEECCCCC
Confidence            79999999986

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.32  E-value=0.037  Score=49.47  Aligned_cols=115  Identities=18%  Similarity=0.133  Sum_probs=67.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCe--EEEEeCCc--hhHHHHHHHhCCCeeE----EEecCC-CHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAK--VVIADIQH--QLGQQTAKELGPNATF----IACDVT-KESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~--Vi~~~r~~--~~~~~~~~~~~~~v~~----~~~D~s-~~~~i~~~~~~~~~~  105 (297)
                      +++.|+|++|.+|..++..++..|..  |++++|+.  ++++....++.+....    .....+ +.+   . +      
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~---~-l------   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS---D-V------   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH---H-h------
Confidence            57899999999999999999999864  99999955  4443332222110000    011111 211   1 2      


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                       ...|++|..+|....     .+.+.   .+.++.|+.-...+.+.+.+..   ..+.++++++..
T Consensus        71 -~~aDiViitag~p~~-----~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          71 -AGSDIVIITAGVPRK-----EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             -CCCCEEEEecCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence             368999999997521     12232   3455556665555555554432   356777777643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.29  E-value=0.033  Score=50.45  Aligned_cols=38  Identities=42%  Similarity=0.594  Sum_probs=34.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..++.++|+|.|+ ||+|..+++.|+..|. ++.++|++.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3688999999999 8999999999999999 799998863

>PLN00203 glutamyl-tRNA reductase

Probab=96.29  E-value=0.021  Score=54.51  Aligned_cols=77  Identities=16%  Similarity=0.290  Sum_probs=56.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++.+.+.+.++. +.....++   ++..+.+.       ..
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~---~dl~~al~-------~a  330 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPL---DEMLACAA-------EA  330 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecH---hhHHHHHh-------cC
Confidence            488999999999 9999999999999997 699999999998888776531 11111122   23333332       57


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |+||.+.+..
T Consensus       331 DVVIsAT~s~  340 (519)
T PLN00203        331 DVVFTSTSSE  340 (519)
T ss_pred             CEEEEccCCC
Confidence            9999887643

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.28  E-value=0.026  Score=50.73  Aligned_cols=88  Identities=15%  Similarity=0.229  Sum_probs=58.4

Q ss_pred             hhhhccCCCCCccCC-CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHH
Q 022418           18 AERCSRGLSTESRKL-EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS   96 (297)
Q Consensus        18 ~~~~~~~~~~~~~~~-~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~   96 (297)
                      |-+-+.+-+-...+. .|++++|+|.. |+|...++.....|++|++++|++++++..++ ++.+..+   |.++++..+
T Consensus       150 CaGiT~y~alk~~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd~~i---~~~~~~~~~  224 (339)
T COG1064         150 CAGITTYRALKKANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVI---NSSDSDALE  224 (339)
T ss_pred             cCeeeEeeehhhcCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCcEEE---EcCCchhhH
Confidence            334444444333444 48999999998 99977777666699999999999998766544 4443322   333444444


Q ss_pred             HHHHHHHHHcCCccEEEECcc
Q 022418           97 DAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        97 ~~~~~~~~~~g~id~li~~ag  117 (297)
                      ++-+       ..|.+|..++
T Consensus       225 ~~~~-------~~d~ii~tv~  238 (339)
T COG1064         225 AVKE-------IADAIIDTVG  238 (339)
T ss_pred             HhHh-------hCcEEEECCC
Confidence            3333       2799999887

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.25  E-value=0.024  Score=58.18  Aligned_cols=79  Identities=20%  Similarity=0.272  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCC-Ce-------------EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNG-AK-------------VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G-~~-------------Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   97 (297)
                      -+.|.|+|.|+ |.+|+..++.|++.. +.             |++++++.+..++..+.. ..+..++.|++|.+++.+
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-~~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-ENAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-CCCceEEeecCCHHHHHH
Confidence            45779999997 999999999999753 23             888899988877776654 246789999999988877


Q ss_pred             HHHHHHHHcCCccEEEECccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~  119 (297)
                      +++       ++|+||++....
T Consensus       645 ~v~-------~~DaVIsalP~~  659 (1042)
T PLN02819        645 YVS-------QVDVVISLLPAS  659 (1042)
T ss_pred             hhc-------CCCEEEECCCch
Confidence            766       589999988653

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.22  E-value=0.027  Score=50.09  Aligned_cols=80  Identities=23%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|+|+++++|.+++..+...|++|+.++++.++.+.. ++++.. .  ..|..+.+..+++.+..  ...++|.
T Consensus       141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~-~--~~~~~~~~~~~~~~~~~--~~~~~d~  214 (324)
T cd08244         141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGAD-V--AVDYTRPDWPDQVREAL--GGGGVTV  214 (324)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCC-E--EEecCCccHHHHHHHHc--CCCCceE
Confidence            3478999999999999999999999999999999888776554 445432 1  12333433333333221  1126999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++++.|
T Consensus       215 vl~~~g  220 (324)
T cd08244         215 VLDGVG  220 (324)
T ss_pred             EEECCC
Confidence            998876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.14  E-value=0.038  Score=48.85  Aligned_cols=79  Identities=15%  Similarity=0.235  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||.+.|.|.++-+|+.++..|.++|++|++..|....+++..++    ..++..=+.+++.+...+  +     +.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----ADIVIsavg~~~~v~~~~--i-----k~  223 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----ADIVVAAVGRPRLIDADW--L-----KP  223 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----CCEEEEecCChhcccHhh--c-----cC
Confidence            489999999999999999999999999999999998776655555443    233444445555554433  1     45


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      ..+|-..|+.
T Consensus       224 GaiVIDvgin  233 (301)
T PRK14194        224 GAVVIDVGIN  233 (301)
T ss_pred             CcEEEEeccc
Confidence            5666667765

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.08  E-value=0.025  Score=50.33  Aligned_cols=80  Identities=14%  Similarity=0.147  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|.+++......|++++++.++.++.+...+ ++.. .++  +..+. +..+.+..... ..++|+
T Consensus       138 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~-~~~~~i~~~~~-~~~~d~  211 (324)
T cd08292         138 KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIG-PVV--STEQP-GWQDKVREAAG-GAPISV  211 (324)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCC-EEE--cCCCc-hHHHHHHHHhC-CCCCcE
Confidence            357899999999999999999999999999999888877666544 4432 222  22232 22222222211 126999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       212 v~d~~g  217 (324)
T cd08292         212 ALDSVG  217 (324)
T ss_pred             EEECCC
Confidence            998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.08  E-value=0.036  Score=49.93  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|.+++|+|+ |++|...+..+...|++ |+++++++++.+.. ++++...   ..|..+.+ .+++.+ ... ..++|
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~---~i~~~~~~-~~~~~~-~~~-~~~~d  233 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADF---VINSGQDD-VQEIRE-LTS-GAGAD  233 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EEcCCcch-HHHHHH-HhC-CCCCC
Confidence            34889999986 89999999998889999 99999988876554 5555421   23444433 333322 211 12699


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.+.|.
T Consensus       234 ~vid~~g~  241 (339)
T cd08239         234 VAIECSGN  241 (339)
T ss_pred             EEEECCCC
Confidence            99988873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.08  E-value=0.024  Score=49.48  Aligned_cols=81  Identities=20%  Similarity=0.325  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +|+|++|.||+|..|+ ++-+|++ .|++|+..+-+.++..-++.+++-+..   .|.-++..+.+++++...+  .||+
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~a---fNYK~e~~~~~aL~r~~P~--GIDi  226 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDA---FNYKEESDLSAALKRCFPE--GIDI  226 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhccCCccc---eeccCccCHHHHHHHhCCC--cceE
Confidence            5699999999999995 5666666 699999999999988888887753321   1333333556666654322  7999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      .+-|.|..
T Consensus       227 YfeNVGG~  234 (343)
T KOG1196|consen  227 YFENVGGK  234 (343)
T ss_pred             EEeccCcH
Confidence            99999854

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.01  E-value=0.26  Score=41.09  Aligned_cols=69  Identities=17%  Similarity=0.242  Sum_probs=47.2

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhC--------------CCeeEEEecCCCHHHHHHHHH
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELG--------------PNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~--------------~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      .....||+|.||.+++++|++.|++|++..|+. +..+...+.++              .++.++..-+   +.+..+++
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~   78 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLA   78 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHH
Confidence            455677889999999999999999999885555 45555555442              2344433333   55677777


Q ss_pred             HHHHHcC
Q 022418          101 FTISKHN  107 (297)
Q Consensus       101 ~~~~~~g  107 (297)
                      ++.+.++
T Consensus        79 ~l~~~~~   85 (211)
T COG2085          79 ELRDALG   85 (211)
T ss_pred             HHHHHhC
Confidence            7777664

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.98  E-value=0.078  Score=42.46  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=32.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ   72 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~   72 (297)
                      ...+.||+++|.|- |.+|+.+|++|...|++|+++..++-..-
T Consensus        18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            35689999999998 89999999999999999999999885433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.97  E-value=0.034  Score=44.73  Aligned_cols=81  Identities=15%  Similarity=0.127  Sum_probs=56.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHHHH--H
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAVDF--T  102 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~~~--~  102 (297)
                      +++-+.|- |-+|..+++.|+++|++|.+.+|+.++.+++.++-          -.....+..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46777887 89999999999999999999999998888776542          11235566677888888888887  6


Q ss_pred             HHHcCCccEEEECc
Q 022418          103 ISKHNQLDIMYNNA  116 (297)
Q Consensus       103 ~~~~g~id~li~~a  116 (297)
                      .....+=.++|...
T Consensus        81 ~~~l~~g~iiid~s   94 (163)
T PF03446_consen   81 LAGLRPGKIIIDMS   94 (163)
T ss_dssp             GGGS-TTEEEEE-S
T ss_pred             hhccccceEEEecC
Confidence            55443334555444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.94  E-value=0.06  Score=49.25  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~i  109 (297)
                      ..|.+++|+|+ |++|...+......|+ +|+++++++++.+.. ++++...   ..|..+ .+.+.+.+.++..  +.+
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~---~i~~~~~~~~~~~~v~~~~~--~g~  256 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD---CVNPNDYDKPIQEVIVEITD--GGV  256 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe---EEcccccchhHHHHHHHHhC--CCC
Confidence            35789999985 9999999888888998 699999988876655 4455422   224332 2233333333322  369


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       257 d~vid~~G~  265 (368)
T TIGR02818       257 DYSFECIGN  265 (368)
T ss_pred             CEEEECCCC
Confidence            999999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.93  E-value=0.15  Score=48.40  Aligned_cols=77  Identities=18%  Similarity=0.163  Sum_probs=51.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++++++++|.|+ |++|.++|+.|.++|++|++++++.. ......+.+ ...+.+...+-..      .       .
T Consensus        11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~-------~   76 (480)
T PRK01438         11 HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------L-------P   76 (480)
T ss_pred             ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------c-------c
Confidence            34678899999997 88999999999999999999986653 222222222 1123333222111      0       1


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                      ...|.+|..+|+.
T Consensus        77 ~~~D~Vv~s~Gi~   89 (480)
T PRK01438         77 EDTDLVVTSPGWR   89 (480)
T ss_pred             CCCCEEEECCCcC
Confidence            2579999999976

>PRK14968 putative methyltransferase; Provisional

Probab=95.90  E-value=0.15  Score=41.49  Aligned_cols=74  Identities=23%  Similarity=0.206  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCC---eeEEEecCCCHHHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPN---ATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~---v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++++-.|++.|.   ++..+++.+.+|+.++++++..+...+.+   +..   +.++.+|+.+.         ..+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            466788888888775   55666666899999999987666554433   222   77788887542         111 


Q ss_pred             cCCccEEEECccCC
Q 022418          106 HNQLDIMYNNAGVA  119 (297)
Q Consensus       106 ~g~id~li~~ag~~  119 (297)
                       +..|.++.|....
T Consensus        89 -~~~d~vi~n~p~~  101 (188)
T PRK14968         89 -DKFDVILFNPPYL  101 (188)
T ss_pred             -cCceEEEECCCcC
Confidence             2689999998765

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.90  E-value=0.061  Score=49.18  Aligned_cols=79  Identities=14%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      ..|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. ++++... +  .|..+. +++.+.+.++..  +++
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--~g~  257 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD-C--VNPKDHDKPIQQVLVEMTD--GGV  257 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE-E--EcccccchHHHHHHHHHhC--CCC
Confidence            35889999975 9999999999889999 699999998877654 4565432 1  244332 234444444432  379


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |+++.+.|
T Consensus       258 d~vid~~g  265 (368)
T cd08300         258 DYTFECIG  265 (368)
T ss_pred             cEEEECCC
Confidence            99999887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.89  E-value=0.045  Score=48.80  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+.+++|.|+++++|.+++....+.|++|+.+++++++.+.. ++++... +  .|..+. . .+.+....  .+.+|.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v--~~~~~~-~-~~~~~~~~--~~~~d~v  217 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKE-V--IPREEL-Q-EESIKPLE--KQRWAGA  217 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCE-E--EcchhH-H-HHHHHhhc--cCCcCEE
Confidence            367999999999999999999989999999999998876665 4455321 1  222222 1 12222221  2368999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       218 ld~~g  222 (326)
T cd08289         218 VDPVG  222 (326)
T ss_pred             EECCc
Confidence            88776

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.88  E-value=0.023  Score=48.14  Aligned_cols=43  Identities=19%  Similarity=0.323  Sum_probs=37.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      +++.|.||+|.+|.+++..|++.|++|++.+|++++.+...+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            4689999999999999999999999999999998887766553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.87  E-value=0.058  Score=47.88  Aligned_cols=80  Identities=14%  Similarity=0.094  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|.++++.+...|++|+++.++.++.+.. ++++.+ .  ..|..+....+++. +.. ...++|.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~--~~~~~~~~~~~~~~-~~~-~~~~~d~  210 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGAD-E--VIDSSPEDLAQRVK-EAT-GGAGARL  210 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCC-E--EecccchhHHHHHH-HHh-cCCCceE
Confidence            4578999999999999999999999999999999988776555 445432 1  12333322223322 221 1136999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       211 vl~~~g  216 (323)
T cd05282         211 ALDAVG  216 (323)
T ss_pred             EEECCC
Confidence            998887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02740 Alcohol dehydrogenase-like

Probab=95.86  E-value=0.058  Score=49.60  Aligned_cols=80  Identities=23%  Similarity=0.289  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      -.|.+++|.|+ |++|...+......|+ +|+++++++++++.. ++++... +  .|..+. +...+.+.++..  +.+
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~--i~~~~~~~~~~~~v~~~~~--~g~  269 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGITD-F--INPKDSDKPVHERIREMTG--GGV  269 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCcE-E--EecccccchHHHHHHHHhC--CCC
Confidence            45889999986 9999999998888999 599999988876665 4455422 2  243332 223333333322  269


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       270 dvvid~~G~  278 (381)
T PLN02740        270 DYSFECAGN  278 (381)
T ss_pred             CEEEECCCC
Confidence            999999884

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.86  E-value=0.068  Score=48.80  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|.|+ |++|...+......|++|++++.+.++..+..++++....   .|..+.+.+.+    .   .+.+|++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v---i~~~~~~~~~~----~---~~~~D~v  251 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF---LVSTDPEKMKA----A---IGTMDYI  251 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE---EcCCCHHHHHh----h---cCCCCEE
Confidence            6889999775 9999999998888999998888877766666566654221   13333322222    1   1358999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |.+.|
T Consensus       252 id~~g  256 (360)
T PLN02586        252 IDTVS  256 (360)
T ss_pred             EECCC
Confidence            98887

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.84  E-value=0.061  Score=48.04  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|.|+++.+|.+++......|.+|+.+.++.++.+.. ++++.+ .++  |..+ .+..+.+.....  +.+|.
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~~~~~~~~--~~vd~  210 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD-RPI--NYKT-EDLGEVLKKEYP--KGVDV  210 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc-eEE--eCCC-ccHHHHHHHhcC--CCCeE
Confidence            4578999999999999999998888999999999887766555 445432 122  3222 223333333322  36899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++++.|
T Consensus       211 v~~~~g  216 (329)
T cd08250         211 VYESVG  216 (329)
T ss_pred             EEECCc
Confidence            998776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.84  E-value=0.069  Score=48.39  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH--HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE--SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~--~~i~~~~~~~~~~~g~i  109 (297)
                      -.|.+++|.|+ |++|...+......|++|+++++++++.+.. ++++....   .|..+.  +.+.+.+.++.... ++
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~---i~~~~~~~~~~~~~~~~~t~~~-g~  238 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLT---LNPKDKSAREVKKLIKAFAKAR-GL  238 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceE---ecCccccHHHHHHHHHhhcccC-CC
Confidence            35889999999 9999999999888999999999998877654 45554322   233222  33433343332211 34


Q ss_pred             c----EEEECcc
Q 022418          110 D----IMYNNAG  117 (297)
Q Consensus       110 d----~li~~ag  117 (297)
                      |    .++-++|
T Consensus       239 d~~~d~v~d~~g  250 (349)
T TIGR03201       239 RSTGWKIFECSG  250 (349)
T ss_pred             CCCcCEEEECCC
Confidence            4    6777776

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.83  E-value=0.039  Score=48.62  Aligned_cols=79  Identities=24%  Similarity=0.343  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.. .+.+.. ..+  +..+.+..++ +..... ...+|.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~-i~~~~~-~~~~d~v  212 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGAD-HVI--DYRDPDLRER-VKALTG-GRGVDVV  212 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCc-eee--ecCCccHHHH-HHHHcC-CCCcEEE
Confidence            578999999999999999999999999999999987765554 334332 122  2222222222 222211 1368999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            98876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.81  E-value=0.075  Score=45.29  Aligned_cols=37  Identities=30%  Similarity=0.508  Sum_probs=31.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4688999999996 8999999999999998 46666443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.80  E-value=0.074  Score=47.00  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|.+++......|++|+.+.++.++.+.. .+++..  .+..+  +. +..+.+.+.   ..++|.
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~--~~~~~--~~-~~~~~i~~~---~~~~d~  211 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGAD--EVVID--DG-AIAEQLRAA---PGGFDK  211 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCc--EEEec--Cc-cHHHHHHHh---CCCceE
Confidence            4578999999999999999999999999999999888765554 445432  22112  21 222222222   236999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       212 vl~~~~  217 (320)
T cd08243         212 VLELVG  217 (320)
T ss_pred             EEECCC
Confidence            998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.80  E-value=0.062  Score=49.43  Aligned_cols=37  Identities=32%  Similarity=0.509  Sum_probs=32.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. +++++|++
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3688999999977 8999999999999998 58888887

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.76  E-value=0.04  Score=48.42  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .+|.+++|.|+++++|.+++......|++|+.++++.++.+.. .+++.. ..+  +..+.....++. ... ....+|.
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~~~-~~~-~~~~~d~  208 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGAD-HVI--NYRDEDFVERVR-EIT-GGRGVDV  208 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCC-EEE--eCCchhHHHHHH-HHc-CCCCeeE
Confidence            3678999999999999999999999999999999888776655 445432 222  222222222222 221 1126999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++++.|
T Consensus       209 vl~~~~  214 (320)
T cd05286         209 VYDGVG  214 (320)
T ss_pred             EEECCC
Confidence            998776

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.75  E-value=0.052  Score=51.06  Aligned_cols=77  Identities=21%  Similarity=0.242  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..+...++. ..+..+..|.++++.++++-      ..+.|.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~------~~~a~~  300 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEG------IDEADA  300 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcC------CccCCE
Confidence            56789999999 99999999999999999999999998877766643 34667889999987664332      136788


Q ss_pred             EEECc
Q 022418          112 MYNNA  116 (297)
Q Consensus       112 li~~a  116 (297)
                      +|...
T Consensus       301 vi~~~  305 (453)
T PRK09496        301 FIALT  305 (453)
T ss_pred             EEECC
Confidence            87443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.07  Score=46.88  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=54.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++|.|.|.-+|+.++..|.++|++|+++.+....+++..+..  ++.+  .=+..+.-+..  +     +=+.
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~A--DIVV--~avG~~~~i~~--~-----~ik~  222 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQA--DIVV--AAVGKRNVLTA--D-----MVKP  222 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhC--CEEE--EcCCCcCccCH--H-----HcCC
Confidence            4799999999999999999999999999999998876655555544432  2222  22222222221  1     2256


Q ss_pred             cEEEECccCCC
Q 022418          110 DIMYNNAGVAC  120 (297)
Q Consensus       110 d~li~~ag~~~  120 (297)
                      +.+|-+.|+..
T Consensus       223 gavVIDVGin~  233 (285)
T PRK14189        223 GATVIDVGMNR  233 (285)
T ss_pred             CCEEEEccccc
Confidence            77888888763

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.74  E-value=0.1  Score=48.59  Aligned_cols=42  Identities=21%  Similarity=0.420  Sum_probs=37.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ   72 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~   72 (297)
                      ..+.||+++|.|. |.||+.++..+...|++|+++++++.+..
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            3579999999997 79999999999999999999999876543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.72  E-value=0.1  Score=43.58  Aligned_cols=39  Identities=21%  Similarity=0.329  Sum_probs=35.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      ..+++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            35799999999999 8999999999999999999998764

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.65  E-value=0.065  Score=46.72  Aligned_cols=115  Identities=19%  Similarity=0.219  Sum_probs=65.9

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCC----CeEEEEeCCchhHHHHHHHhCCCeeEE-EecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           37 ALITGAASGIGKATAAKFISNG----AKVVIADIQHQLGQQTAKELGPNATFI-ACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G----~~Vi~~~r~~~~~~~~~~~~~~~v~~~-~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +.|+|++|.+|..++..|+..|    .+|+++|+++++++....++..-.... ...++-..+..+.+       ...|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~-------~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAF-------KDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHh-------CCCCE
Confidence            4689998899999999999999    689999999887776655542111110 11111111112222       36899


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      +|..+|....+     ..+.   ...+..|+.-...+.+.+.++   ...+.++++|.
T Consensus        74 Vv~t~~~~~~~-----g~~r---~~~~~~n~~i~~~i~~~i~~~---~p~a~~i~~tN  120 (263)
T cd00650          74 VIITAGVGRKP-----GMGR---LDLLKRNVPIVKEIGDNIEKY---SPDAWIIVVSN  120 (263)
T ss_pred             EEECCCCCCCc-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            99999875321     1221   234444444444444444332   23466666653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.64  E-value=0.1  Score=47.92  Aligned_cols=75  Identities=13%  Similarity=0.234  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|.|+ |++|...+......|++|++++++.++..+..++++....   .|..+.+.+.   + .   .+.+|++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~---i~~~~~~~v~---~-~---~~~~D~v  246 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSF---LVTTDSQKMK---E-A---VGTMDFI  246 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEE---EcCcCHHHHH---H-h---hCCCcEE
Confidence            5889999986 8999999998888999999998877654555566654321   2333332222   1 1   1368999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      +.+.|.
T Consensus       247 id~~G~  252 (375)
T PLN02178        247 IDTVSA  252 (375)
T ss_pred             EECCCc
Confidence            998873

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.63  E-value=0.09  Score=44.32  Aligned_cols=37  Identities=27%  Similarity=0.469  Sum_probs=33.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~   67 (297)
                      ..+++++|+|.|+ ||+|..+++.|+..|.. ++++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4689999999997 89999999999999985 8888876

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.61  E-value=0.096  Score=49.19  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=36.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      +++.|.||+|.+|.++++.|.+.|++|++.+|+.+...+...+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~   43 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE   43 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence            4689999999999999999999999999999988765444443

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.61  E-value=0.15  Score=47.64  Aligned_cols=112  Identities=13%  Similarity=0.078  Sum_probs=70.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-------CC--eEEEEeCCchhHHHHHHHhCCCe----eEEEecCCCHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISN-------GA--KVVIADIQHQLGQQTAKELGPNA----TFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-------G~--~Vi~~~r~~~~~~~~~~~~~~~v----~~~~~D~s~~~~i~~~~~~  101 (297)
                      -+|.|+|++|.+|.+++..++..       |.  ++++++++.++++...-++.+-.    .-+..-..+.+.       
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~-------  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEV-------  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHH-------
Confidence            37999999999999999999988       65  68999999998776655542111    001100112222       


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC--CCCceEEEEec
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP--RRSGCILCTAS  169 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~g~iv~vss  169 (297)
                          +...|++|..||...   ++  ..+.   .+.++.|+.    +++...+.+.+  ...+.+|++|.
T Consensus       174 ----~kdaDiVVitAG~pr---kp--G~tR---~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 ----FQDAEWALLIGAKPR---GP--GMER---ADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ----hCcCCEEEECCCCCC---CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence                236899999999752   11  2233   456666666    44444444444  34567777764

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.58  E-value=0.039  Score=48.54  Aligned_cols=40  Identities=23%  Similarity=0.346  Sum_probs=36.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+++||.++|+|.+.-+|+.++..|.++|++|+++.++..
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~  193 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK  193 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            3799999999999999999999999999999999887643

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.58  E-value=0.044  Score=42.94  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=37.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ   72 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~   72 (297)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.+++++...++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~   66 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ   66 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            4899999999999999999999999999999999887654333

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.062  Score=47.54  Aligned_cols=78  Identities=18%  Similarity=0.216  Sum_probs=56.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+++||+++|.|-++-+|+.++..|.++|+.|++.. |+.+ +++..+.    ...+.+=+.+++.++..+       =+
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~~----ADIVIsavg~~~~v~~~~-------lk  221 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCRR----ADILVAAVGRPEMVKGDW-------IK  221 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHhc----CCEEEEecCChhhcchhe-------ec
Confidence            379999999999999999999999999999999985 6543 3433332    334445556666555433       14


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      ...+|-..|+.
T Consensus       222 ~GavVIDvGin  232 (296)
T PRK14188        222 PGATVIDVGIN  232 (296)
T ss_pred             CCCEEEEcCCc
Confidence            56677777776

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.56  E-value=0.093  Score=48.80  Aligned_cols=85  Identities=12%  Similarity=0.117  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHhCC-----CeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQLGQQTAKELGP-----NATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~-----~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      -.|.+++|.|++|++|...+..+...|.   +|+++++++++++...+..+.     .......|..+.++..+.+.++.
T Consensus       174 ~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t  253 (410)
T cd08238         174 KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELT  253 (410)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHh
Confidence            3567999999999999998877666654   799999999887765543211     11112234333223333333332


Q ss_pred             HHcCCccEEEECcc
Q 022418          104 SKHNQLDIMYNNAG  117 (297)
Q Consensus       104 ~~~g~id~li~~ag  117 (297)
                      . ...+|.+|.+.|
T Consensus       254 ~-g~g~D~vid~~g  266 (410)
T cd08238         254 G-GQGFDDVFVFVP  266 (410)
T ss_pred             C-CCCCCEEEEcCC
Confidence            1 126899998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.54  E-value=0.082  Score=48.09  Aligned_cols=80  Identities=18%  Similarity=0.251  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|.+++|.|+ |++|...+......|++ |+++++++++.+.. ++++.. .+  .|..+++..+.+. +... ..++|
T Consensus       175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~-~~--i~~~~~~~~~~i~-~~~~-~~g~d  247 (358)
T TIGR03451       175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGAT-HT--VNSSGTDPVEAIR-ALTG-GFGAD  247 (358)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eE--EcCCCcCHHHHHH-HHhC-CCCCC
Confidence            35789999985 99999998888889985 88888888776655 445542 11  2443333222222 2211 12589


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.+.|.
T Consensus       248 ~vid~~g~  255 (358)
T TIGR03451       248 VVIDAVGR  255 (358)
T ss_pred             EEEECCCC
Confidence            99988873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.52  E-value=0.086  Score=47.12  Aligned_cols=78  Identities=18%  Similarity=0.262  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++++++||++++|...+......|++|++++++.++.+... +++... ++  |..+.+-.++ +.+... ..++|+++
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~-~i--~~~~~~~~~~-v~~~~~-~~~~d~vi  217 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEY-VL--NSSDPDFLED-LKELIA-KLNATIFF  217 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcE-EE--ECCCccHHHH-HHHHhC-CCCCcEEE
Confidence            345555699999999998877788999999999887766554 354332 22  3323222222 222221 12689999


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      .+.|
T Consensus       218 d~~g  221 (324)
T cd08291         218 DAVG  221 (324)
T ss_pred             ECCC
Confidence            8887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.51  E-value=0.11  Score=47.45  Aligned_cols=79  Identities=19%  Similarity=0.289  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      -.|.+++|.|+ +++|...+......|+ +|+++++++++.+.. ++++... +  .|..+. +++.+.+.++..  +.+
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~-~--i~~~~~~~~~~~~v~~~~~--~~~  258 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTE-F--VNPKDHDKPVQEVIAEMTG--GGV  258 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-E--EcccccchhHHHHHHHHhC--CCC
Confidence            35789999985 9999999888888998 799999998876654 4555421 1  133321 234444444432  369


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |+++.+.|
T Consensus       259 d~vid~~G  266 (369)
T cd08301         259 DYSFECTG  266 (369)
T ss_pred             CEEEECCC
Confidence            99999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.51  E-value=0.5  Score=42.52  Aligned_cols=119  Identities=16%  Similarity=0.251  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++.+++.|.|+ |.+|..++..++..|. +|+++|.+++.++...-++       +.... +.. .+|.++       + 
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~-~~d~~~-------l-   72 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIG-TNNYED-------I-   72 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEE-CCCHHH-------h-
Confidence            45578999995 8899999999999995 8999999988543221111       11111 111 123221       1 


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEeccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVT  171 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~  171 (297)
                         ...|++|+.+|....+.  ..+.++. -.+.+..|+.    +.+.+.+.+.+. ..+.++++|.-.
T Consensus        73 ---~~aDiVI~tag~~~~~~--~~~~~~~-r~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 ---AGSDVVIVTAGLTKRPG--KSDKEWN-RDDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             ---CCCCEEEECCCCCCCCC--CCcCCCC-HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence               26799999999763221  1111111 1445555654    344444444433 345677776544

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.51  E-value=0.69  Score=39.82  Aligned_cols=81  Identities=17%  Similarity=0.254  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+|||--|.||+|..+++.+-..|.+++.+..+.++.+..++. +.   ....|.+.++-+.++.+ +. ...++|+
T Consensus       145 kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken-G~---~h~I~y~~eD~v~~V~k-iT-ngKGVd~  218 (336)
T KOG1197|consen  145 KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN-GA---EHPIDYSTEDYVDEVKK-IT-NGKGVDA  218 (336)
T ss_pred             CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc-CC---cceeeccchhHHHHHHh-cc-CCCCcee
Confidence            4678999999999999999999999999999999888877766553 21   12346655544433333 21 1236888


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +.-..|.
T Consensus       219 vyDsvG~  225 (336)
T KOG1197|consen  219 VYDSVGK  225 (336)
T ss_pred             eeccccc
Confidence            8766663

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.51  E-value=0.17  Score=39.26  Aligned_cols=34  Identities=32%  Similarity=0.571  Sum_probs=27.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ++++++|.|+ |++|.++++.|+..|. +++++|.+
T Consensus         1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            3578999988 8999999999999998 57776543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.47  E-value=0.11  Score=47.77  Aligned_cols=47  Identities=23%  Similarity=0.251  Sum_probs=39.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      ..+.+++|+|+++++|.+++......|+++++++++.++.+... +++
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G  238 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALG  238 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcC
Confidence            45789999999999999999988889999988888887766554 455

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.43  E-value=0.2  Score=45.03  Aligned_cols=118  Identities=17%  Similarity=0.139  Sum_probs=65.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCc--hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-------KVVIADIQH--QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      -++.|+|++|.+|..++..++..|.       .++++|.+.  ++++...-++.+-.....-+..-....   .+    .
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~---~~----~   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDP---EE----A   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecCh---HH----H
Confidence            3789999999999999999998874       799999965  334444333311110000011000001   11    1


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      ...-|++|..||...   ++  ..+   -.+.++.|+.-.-.+.+.+.++-  .+.+.++++|.
T Consensus        77 ~~daDvVVitAG~~~---k~--g~t---R~dll~~Na~i~~~i~~~i~~~~--~~~~iiivvsN  130 (323)
T TIGR01759        77 FKDVDAALLVGAFPR---KP--GME---RADLLSKNGKIFKEQGKALNKVA--KKDVKVLVVGN  130 (323)
T ss_pred             hCCCCEEEEeCCCCC---CC--CCc---HHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEEeCC
Confidence            236799999999752   11  223   34566667664444444444322  12566666664

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.43  E-value=0.079  Score=47.65  Aligned_cols=79  Identities=24%  Similarity=0.306  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .+.+++|.|+++++|.+++..+.+.|.+|+.+.+++++.+.. ++++.+.   ..+..+.+...++.+..  ..+.+|.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~~~--~~~~vd~v  238 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADA---FVDFKKSDDVEAVKELT--GGGGAHAV  238 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcE---EEcCCCccHHHHHHHHh--cCCCCCEE
Confidence            478999999999999999999999999999999998776654 4554321   12333332223322221  12369999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.42  E-value=0.11  Score=46.22  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|.|+++++|.+++..+...|++++++.++.++.+.. ..++.. .+  .|..+.+...+.+..... ...+|.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~~~~~~~~~~~~-~~~~d~~  214 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAI-IL--IRYPDEEGFAPKVKKLTG-EKGVNLV  214 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc-EE--EecCChhHHHHHHHHHhC-CCCceEE
Confidence            568999999999999999999999999988888888766665 345432 12  222222212222222221 1258999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +++.|
T Consensus       215 i~~~~  219 (334)
T PTZ00354        215 LDCVG  219 (334)
T ss_pred             EECCc
Confidence            98875

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.41  E-value=0.038  Score=44.34  Aligned_cols=47  Identities=26%  Similarity=0.362  Sum_probs=36.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      .+++||+++|.|.|.-+|+.++..|.++|+.|.++......+++..+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            46999999999999999999999999999999998877655555444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.40  E-value=0.12  Score=43.13  Aligned_cols=37  Identities=30%  Similarity=0.578  Sum_probs=33.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ..++.++|+|.|+ ||+|..+++.|++.|. +++++|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999 8999999999999999 59998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.38  E-value=0.11  Score=44.88  Aligned_cols=38  Identities=24%  Similarity=0.476  Sum_probs=32.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|..+++.|+..|. +++++|.+.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            4689999999999 9999999999999997 577776543

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.34  E-value=0.11  Score=47.14  Aligned_cols=80  Identities=20%  Similarity=0.293  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC--HHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK--ESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~--~~~i~~~~~~~~~~~g~i  109 (297)
                      .|.+++|+| ++++|..++......|+ +|+++++++++.+.. ++++... ++  |..+  .....+.+.+... ..++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~-vi--~~~~~~~~~~~~~i~~~~~-~~~~  250 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADA-TI--DIDELPDPQRRAIVRDITG-GRGA  250 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCe-EE--cCcccccHHHHHHHHHHhC-CCCC
Confidence            688999997 59999999998888999 899998887766544 4454321 11  2221  1111122222221 1368


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |+++.+.|.
T Consensus       251 d~vid~~g~  259 (361)
T cd08231         251 DVVIEASGH  259 (361)
T ss_pred             cEEEECCCC
Confidence            999998873

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.34  E-value=0.095  Score=47.60  Aligned_cols=75  Identities=24%  Similarity=0.403  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ---HQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ..|++++|+|+ |++|...+..+...|++|++++|+   +++.+ .+++++..  .  .|..+ +...+ .    ...+.
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~Ga~--~--v~~~~-~~~~~-~----~~~~~  238 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELGAT--Y--VNSSK-TPVAE-V----KLVGE  238 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCE--E--ecCCc-cchhh-h----hhcCC
Confidence            36889999986 999999998888899999999984   44444 44556543  2  23333 22222 1    12247


Q ss_pred             ccEEEECccC
Q 022418          109 LDIMYNNAGV  118 (297)
Q Consensus       109 id~li~~ag~  118 (297)
                      +|++|.++|.
T Consensus       239 ~d~vid~~g~  248 (355)
T cd08230         239 FDLIIEATGV  248 (355)
T ss_pred             CCEEEECcCC
Confidence            9999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.17  Score=44.48  Aligned_cols=79  Identities=11%  Similarity=0.186  Sum_probs=54.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||.++|.|-|.-+|+.++..|.++|++|+++.+....+++..+..    .++..=+..+.-+..  +     +=+.
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~A----DIvi~avG~p~~v~~--~-----~vk~  223 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNA----DLLVVAVGKPGFIPG--E-----WIKP  223 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhC----CEEEEcCCCcccccH--H-----HcCC
Confidence            4799999999999999999999999999999999888766555554432    222222323332221  2     2256


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      +.+|-..|+.
T Consensus       224 gavVIDvGin  233 (285)
T PRK10792        224 GAIVIDVGIN  233 (285)
T ss_pred             CcEEEEcccc
Confidence            6777777765

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.29  E-value=0.17  Score=45.56  Aligned_cols=75  Identities=21%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|+|+++++|.+++......|++|+++.++ ++ .+..++++.. .  ..|..+.+....+    .. .+.+|.+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~g~~-~--~~~~~~~~~~~~l----~~-~~~vd~v  231 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSLGAD-D--VIDYNNEDFEEEL----TE-RGKFDVI  231 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHhCCc-e--EEECCChhHHHHH----Hh-cCCCCEE
Confidence            48999999999999999999988999998887765 33 3344544432 1  2233333322222    22 2479999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       232 i~~~g  236 (350)
T cd08248         232 LDTVG  236 (350)
T ss_pred             EECCC
Confidence            98876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.29  E-value=0.15  Score=40.79  Aligned_cols=38  Identities=26%  Similarity=0.286  Sum_probs=33.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI   66 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r   66 (297)
                      -..+++||.++|.|| |-+|...++.|.+.|++|++++.
T Consensus         7 ~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          7 LMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            346899999999998 78999999999999999988853

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.28  E-value=0.16  Score=46.41  Aligned_cols=38  Identities=21%  Similarity=0.370  Sum_probs=32.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4689999999998 8999999999999998 477776553

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.28  E-value=0.11  Score=46.90  Aligned_cols=79  Identities=25%  Similarity=0.369  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+++|+|+ +++|..++..+...|+ +|++++++.++.+.. .+++...   ..|..+.+-.+++.+ .. ..+.+|.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~~~~~l~~-~~-~~~~~d~  244 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATI---VLDPTEVDVVAEVRK-LT-GGGGVDV  244 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EECCCccCHHHHHHH-Hh-CCCCCCE
Confidence            5789999985 8999999999999999 788888888776544 4454322   224444332222222 21 1125999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      ++.+.|.
T Consensus       245 vid~~g~  251 (351)
T cd08233         245 SFDCAGV  251 (351)
T ss_pred             EEECCCC
Confidence            9999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.27  E-value=0.097  Score=44.58  Aligned_cols=37  Identities=38%  Similarity=0.586  Sum_probs=34.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCe---EEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAK---VVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~---Vi~~~r~   67 (297)
                      .++++++++|.|+ |+.|++++..|.+.|.+   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3689999999999 99999999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.25  E-value=0.066  Score=51.96  Aligned_cols=71  Identities=13%  Similarity=0.151  Sum_probs=54.2

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      .++|.|+ |.+|+++++.|.++|++|+++++++++.++..+   .....+..|.+|++.++++=      ..+.|.++..
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~------i~~a~~viv~  488 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAH------LDCARWLLLT  488 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcC------ccccCEEEEE
Confidence            5666666 889999999999999999999999988777754   35778899999987665421      1256766644


Q ss_pred             c
Q 022418          116 A  116 (297)
Q Consensus       116 a  116 (297)
                      .
T Consensus       489 ~  489 (558)
T PRK10669        489 I  489 (558)
T ss_pred             c
Confidence            3

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.25  E-value=0.17  Score=46.39  Aligned_cols=37  Identities=24%  Similarity=0.470  Sum_probs=32.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ..+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4688999999998 8999999999999997 68887665

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.22  E-value=0.14  Score=46.87  Aligned_cols=78  Identities=22%  Similarity=0.337  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+++|+|+ |++|...+......|+ +|+++++++++.+.. ++++...   ..|..+++-.++ +.+..  .+++|+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~---~i~~~~~~~~~~-i~~~~--~~g~d~  262 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATA---TVNAGDPNAVEQ-VRELT--GGGVDY  262 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCce---EeCCCchhHHHH-HHHHh--CCCCCE
Confidence            5789999985 8999998888888999 598899888876644 4555421   123333322222 22222  136899


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.+.|.
T Consensus       263 vid~~G~  269 (371)
T cd08281         263 AFEMAGS  269 (371)
T ss_pred             EEECCCC
Confidence            9998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.21  E-value=0.092  Score=38.77  Aligned_cols=38  Identities=24%  Similarity=0.347  Sum_probs=32.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      .+++||.++|.|| |.+|..=++.|.+.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4789999999999 8999999999999999999999885

>PLN02928 oxidoreductase family protein

Probab=95.20  E-value=0.091  Score=47.79  Aligned_cols=39  Identities=23%  Similarity=0.268  Sum_probs=35.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .++.||++.|.|- |.||+++++.+...|++|++.+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            5799999999998 99999999999999999999998753

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.19  E-value=0.15  Score=44.69  Aligned_cols=48  Identities=19%  Similarity=0.196  Sum_probs=40.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      .+++||.++|.|.|.-+|+-++..|.++|++|+++.+....+.+..+.
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~  201 (282)
T PRK14180        154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTK  201 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhh
Confidence            479999999999999999999999999999999887766555554443

>PLN02494 adenosylhomocysteinase

Probab=95.13  E-value=0.1  Score=48.98  Aligned_cols=40  Identities=33%  Similarity=0.525  Sum_probs=35.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG   71 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~   71 (297)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+.
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            479999999999 5999999999999999999999887653

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.12  E-value=0.17  Score=45.68  Aligned_cols=41  Identities=27%  Similarity=0.336  Sum_probs=36.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      ...++||++.|.|. |.||+++|+.|...|++|++.+|+.+.
T Consensus       141 ~~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        141 SKPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            35799999999987 889999999999999999999988653

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.09  E-value=0.061  Score=44.11  Aligned_cols=42  Identities=24%  Similarity=0.357  Sum_probs=34.3

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      +|.|.|+ |.+|..+|..++..|++|.+.+++.+.++...+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i   42 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI   42 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence            4778888 99999999999999999999999998876655443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.07  E-value=0.19  Score=46.06  Aligned_cols=80  Identities=18%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      ..|.+++|.| .+++|.+++..+...|. +|++++++.++.+.. ++++.. .++  +..+. +...+.+.++..  +++
T Consensus       189 ~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~-~~i--~~~~~~~~~~~~v~~~~~--~~~  261 (373)
T cd08299         189 TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGAT-ECI--NPQDYKKPIQEVLTEMTD--GGV  261 (373)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEe--cccccchhHHHHHHHHhC--CCC
Confidence            3478999996 59999999999999999 799999988876666 445542 111  22221 123333333322  369


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |.++.+.|.
T Consensus       262 d~vld~~g~  270 (373)
T cd08299         262 DFSFEVIGR  270 (373)
T ss_pred             eEEEECCCC
Confidence            999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.07  E-value=0.12  Score=48.72  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=36.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG   71 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~   71 (297)
                      ...+.||+++|.|.+ .||+.+++.+...|++|+++++++...
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            357999999999985 699999999999999999998876543

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.03  E-value=0.39  Score=45.94  Aligned_cols=126  Identities=17%  Similarity=0.220  Sum_probs=69.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++++|.++|.|. |+.|.++|+.|.++|++|.+.|.+... ..+..+..+..+.+...+.. ++    .+       ..
T Consensus         3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~-~~----~~-------~~   69 (498)
T PRK02006          3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFD-PA----LL-------DG   69 (498)
T ss_pred             cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCc-hh----Hh-------cC
Confidence            4577889999996 689999999999999999999976532 11112222222333222221 11    11       14


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHH--HHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccccc
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQ--VMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGL  173 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~  173 (297)
                      .|.+|..+|+....    .+.. ..+.+  ...+.+.+-..++..++..+..+. ...+|-|++.-|-
T Consensus        70 ~d~vv~sp~I~~~~----~~~~-~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         70 VDLVALSPGLSPLE----AALA-PLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             CCEEEECCCCCCcc----cccC-HHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence            69999999976210    0011 12222  234555655555544444332221 1257777765543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.01  E-value=0.35  Score=43.23  Aligned_cols=115  Identities=20%  Similarity=0.189  Sum_probs=67.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCC---CeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGP---NATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++.|+|++|.+|.+++..++..|.  .++++|.+  .++...-++.+   .+....+. .+ +++.+       .....
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~y~-------~~~da   69 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EELKK-------ALKGA   69 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-CchHH-------hcCCC
Confidence            4789999999999999999998884  68999987  22222111211   11111110 00 11111       22378


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      |++|..||....+     ..+   =.+.++.|..-.-.+.+.+.++   ...+.++++|.-.
T Consensus        70 DivvitaG~~~k~-----g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRKP-----GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            9999999975211     123   2556777777655555555543   2357788777655

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.99  E-value=0.11  Score=46.35  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++.+|.+++......|++|+.++++.++.+.. ++++.. .++  +..+. +..+.+..... ...+|+
T Consensus       139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~~~~~~~-~~~~d~  212 (327)
T PRK10754        139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAW-QVI--NYREE-NIVERVKEITG-GKKVRV  212 (327)
T ss_pred             CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCC-EEE--cCCCC-cHHHHHHHHcC-CCCeEE
Confidence            4678999999999999999988888999999998887766544 445432 222  22222 22222222221 135899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       213 vl~~~~  218 (327)
T PRK10754        213 VYDSVG  218 (327)
T ss_pred             EEECCc
Confidence            987765

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.98  E-value=0.12  Score=41.72  Aligned_cols=46  Identities=24%  Similarity=0.284  Sum_probs=36.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      ..+...+++|+|+ |-.|...++.|...|++|+..+.+.+..++...
T Consensus        16 ~~~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~   61 (168)
T PF01262_consen   16 GGVPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLES   61 (168)
T ss_dssp             TEE-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH
T ss_pred             CCCCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc
Confidence            4577789999995 899999999999999999999998877666543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PLN02827 Alcohol dehydrogenase-like

Probab=94.98  E-value=0.2  Score=46.08  Aligned_cols=80  Identities=16%  Similarity=0.249  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      ..|.+++|.|+ |++|...+......|++ |+++++++++.+.. ++++... +  .|..+. +...+.+.++..  +.+
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--~g~  264 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTD-F--INPNDLSEPIQQVIKRMTG--GGA  264 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcE-E--EcccccchHHHHHHHHHhC--CCC
Confidence            45889999985 99999999888889985 77777777765544 5555421 1  233332 234444444322  369


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       265 d~vid~~G~  273 (378)
T PLN02827        265 DYSFECVGD  273 (378)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.97  E-value=0.14  Score=45.07  Aligned_cols=47  Identities=26%  Similarity=0.309  Sum_probs=40.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      .|.+++|.|+++++|.+++..+.+.|++|+.++++.++.+...+ ++.
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~  178 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGA  178 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC
Confidence            58999999999999999999999999999999998877666544 543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.14  Score=44.94  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=52.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||.+.|.|-|+-+|+.++..|.++|++|+++......+++..+.    ..++..=+.+++.+...+  +     +.
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~----ADIVI~avg~~~~v~~~~--i-----k~  222 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARK----ADILVVAIGRGHFVTKEF--V-----KE  222 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhh----CCEEEEecCccccCCHHH--c-----cC
Confidence            479999999999999999999999999999999874444444444333    222333334444343322  1     44


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      ..+|-..|+.
T Consensus       223 GavVIDvgin  232 (284)
T PRK14179        223 GAVVIDVGMN  232 (284)
T ss_pred             CcEEEEecce
Confidence            5666666665

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.17  Score=44.26  Aligned_cols=48  Identities=21%  Similarity=0.318  Sum_probs=40.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      .+++||.++|.|-|.-+|+-++..|.++|++|+++.+....+.+..+.
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~  201 (278)
T PRK14172        154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKK  201 (278)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh
Confidence            389999999999999999999999999999999887666555555443

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.96  E-value=0.11  Score=45.43  Aligned_cols=77  Identities=22%  Similarity=0.241  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++++|.|+ |++|...+..+...|++ |+++++++++.+. .++++....   .|..+.   .+.+.+... ...+|+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~Ga~~~---i~~~~~---~~~~~~~~~-~~g~d~  190 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSFGATAL---AEPEVL---AERQGGLQN-GRGVDV  190 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCCcEe---cCchhh---HHHHHHHhC-CCCCCE
Confidence            6889999986 89999999888889997 8888877776544 444554221   122221   122222211 125899


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.+.|.
T Consensus       191 vid~~G~  197 (280)
T TIGR03366       191 ALEFSGA  197 (280)
T ss_pred             EEECCCC
Confidence            9998873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.95  E-value=0.12  Score=36.71  Aligned_cols=36  Identities=33%  Similarity=0.554  Sum_probs=31.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISN-GAKVVIADI   66 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r   66 (297)
                      .++++|+++|.|+ |.+|+.++..+.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5689999999999 99999999999998 567777776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.92  E-value=0.22  Score=40.52  Aligned_cols=32  Identities=25%  Similarity=0.404  Sum_probs=27.8

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCc
Q 022418           36 VALITGAASGIGKATAAKFISNGAK-VVIADIQH   68 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~   68 (297)
                      +|+|.|+ ||+|..+++.|+..|.. ++++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678886 89999999999999995 99988876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.92  E-value=0.42  Score=45.42  Aligned_cols=73  Identities=19%  Similarity=0.254  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +.+|.++|.| .|+.|+++++.|.++|+.|.+.+++.....+..++.+  +.+...+ .+.+.+           ...|.
T Consensus        13 ~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~g--i~~~~~~-~~~~~~-----------~~~d~   77 (473)
T PRK00141         13 ELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTG--VADISTA-EASDQL-----------DSFSL   77 (473)
T ss_pred             ccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcC--cEEEeCC-CchhHh-----------cCCCE
Confidence            6678899999 5899999999999999999999987654433333322  2222210 111111           25799


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|..+|+.
T Consensus        78 vV~Spgi~   85 (473)
T PRK00141         78 VVTSPGWR   85 (473)
T ss_pred             EEeCCCCC
Confidence            99999986

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.89  E-value=0.22  Score=44.75  Aligned_cols=76  Identities=18%  Similarity=0.313  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+++|.| ++.+|.+++..+...|++|+.+++++++.+.. ++++.+ +++  |..+.+ ..+.+...    +.+|.
T Consensus       162 ~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~-~~i--~~~~~~-~~~~~~~~----~~~d~  231 (333)
T cd08296         162 KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAH-HYI--DTSKED-VAEALQEL----GGAKL  231 (333)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCc-EEe--cCCCcc-HHHHHHhc----CCCCE
Confidence            3578999999 79999999999889999999999988776655 555542 122  332222 22222222    36899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       232 vi~~~g  237 (333)
T cd08296         232 ILATAP  237 (333)
T ss_pred             EEECCC
Confidence            997765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.88  E-value=0.2  Score=45.70  Aligned_cols=80  Identities=19%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~i  109 (297)
                      ..|.+++|.|+ +++|...+......|+ +|+++++++++.+.. ++++... ++  |..+. ..+.+.+.+...  +.+
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~~~~~~~--~g~  255 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATD-FI--NPKDSDKPVSEVIREMTG--GGV  255 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCc-Ee--ccccccchHHHHHHHHhC--CCC
Confidence            45789999975 9999999988888998 698999988776655 4455321 11  22221 122233333322  369


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.+.|.
T Consensus       256 d~vid~~g~  264 (365)
T cd08277         256 DYSFECTGN  264 (365)
T ss_pred             CEEEECCCC
Confidence            999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.22  Score=43.83  Aligned_cols=48  Identities=23%  Similarity=0.308  Sum_probs=40.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      .+++||.++|.|.|.-+|+.++..|.++|++|+++......+++..+.
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~  207 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLD  207 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhh
Confidence            479999999999999999999999999999999988766555554443

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.87  E-value=0.23  Score=45.97  Aligned_cols=48  Identities=25%  Similarity=0.263  Sum_probs=39.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      ..|.+++|+|+++++|.+++..+...|+++++++++.++.+... +++.
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~  235 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGA  235 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCC
Confidence            35789999999999999999998899999988888777655544 3543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.86  E-value=0.14  Score=46.18  Aligned_cols=79  Identities=27%  Similarity=0.311  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|++++|+| ++++|...+......|++ |++++++.++.+.. ++++.. .++  |..+.. ..++.+.. . ..++|
T Consensus       159 ~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~-~~i--~~~~~~-~~~~~~~~-~-~~~~d  230 (347)
T PRK10309        159 CEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAM-QTF--NSREMS-APQIQSVL-R-ELRFD  230 (347)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCc-eEe--cCcccC-HHHHHHHh-c-CCCCC
Confidence            3578999997 599999999888889997 67788888776654 555532 222  222211 22222222 1 12577


Q ss_pred             -EEEECccC
Q 022418          111 -IMYNNAGV  118 (297)
Q Consensus       111 -~li~~ag~  118 (297)
                       ++|.++|.
T Consensus       231 ~~v~d~~G~  239 (347)
T PRK10309        231 QLILETAGV  239 (347)
T ss_pred             eEEEECCCC
Confidence             77887773

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.85  E-value=0.15  Score=42.67  Aligned_cols=58  Identities=17%  Similarity=0.233  Sum_probs=43.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVT   90 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s   90 (297)
                      .+++||.++|.|| |.+|..-++.|++.|++|++++.... .+.++.++  .++.++.-+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~   63 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ--GGITWLARCFD   63 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCC
Confidence            4689999999998 88999999999999999999987654 33333332  25666555554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.83  E-value=0.29  Score=43.50  Aligned_cols=84  Identities=24%  Similarity=0.329  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.++||.|| |-||.......-..|+ +|++++-.+.+++-.++ ++.++......-++.+.+.+.++...... .+|+
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-~~d~  245 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQELAELVEKALGKK-QPDV  245 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHHHHHHHHhhcccc-CCCe
Confidence            4678999998 8899888887777887 49999999988887666 87766655555546666666666665432 4999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      .|.+.|.-
T Consensus       246 ~~dCsG~~  253 (354)
T KOG0024|consen  246 TFDCSGAE  253 (354)
T ss_pred             EEEccCch
Confidence            99999854

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.22  Score=43.62  Aligned_cols=47  Identities=26%  Similarity=0.263  Sum_probs=39.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      .+++||.++|.|.|.-+|+-++..|.++|+.|.++......+.+..+
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~  199 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTK  199 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHh
Confidence            48999999999999999999999999999999977655544554444

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.80  E-value=0.23  Score=43.60  Aligned_cols=48  Identities=31%  Similarity=0.387  Sum_probs=40.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      .+++||.++|.|-|.-+|+-++..|.++|++|+++......+++..+.
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~  200 (284)
T PRK14170        153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKE  200 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh
Confidence            489999999999999999999999999999998876665555555443

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.79  E-value=0.18  Score=45.39  Aligned_cols=77  Identities=19%  Similarity=0.252  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|.+++......|++|+.++++. +.+. .++++..  .+ .+. +.....+ ....  ....+|+
T Consensus       176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~-~~~~g~~--~~-~~~-~~~~~~~-~~~~--~~~~~d~  246 (350)
T cd08274         176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEA-VRALGAD--TV-ILR-DAPLLAD-AKAL--GGEPVDV  246 (350)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHH-HHhcCCe--EE-EeC-CCccHHH-HHhh--CCCCCcE
Confidence            3578999999999999999999999999998888654 4333 3555542  21 122 1122222 1111  1236999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|.+.|
T Consensus       247 vi~~~g  252 (350)
T cd08274         247 VADVVG  252 (350)
T ss_pred             EEecCC
Confidence            998876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=94.79  E-value=0.13  Score=44.81  Aligned_cols=163  Identities=10%  Similarity=0.088  Sum_probs=90.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEE-EeCCchhHHH-----------HHHHhCCCeeEEEecCCCHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVI-ADIQHQLGQQ-----------TAKELGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~-~~r~~~~~~~-----------~~~~~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++.|+|++|.+|+.+++.+.+. +..++. ++++.+....           ..+-+. .+. +..|++.++...+.+..
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~-~~D-vVid~t~p~~~~~~~~~   79 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLA-DAD-VLIDFTTPEATLENLEF   79 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhcc-CCC-EEEECCCHHHHHHHHHH
Confidence            47899999999999999988864 677655 5555432211           111111 122 45799999888888877


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHH----------Hhhh----HHHHHHHHHHHhccCCCCceEEEE
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR----------INVR----GVVAGIKHSTRVMIPRRSGCILCT  167 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~----------~n~~----~~~~l~~~~~~~l~~~~~g~iv~v  167 (297)
                      ..+.  ++++++-..|..           .++.+++.+          .|+.    -...+++.+.+.+.     . -.+
T Consensus        80 al~~--G~~vvigttG~s-----------~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l~-----~-~d~  140 (257)
T PRK00048         80 ALEH--GKPLVIGTTGFT-----------EEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYLG-----D-YDI  140 (257)
T ss_pred             HHHc--CCCEEEECCCCC-----------HHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhcC-----C-CCE
Confidence            7765  677886655433           333333222          1222    22233333333331     0 111


Q ss_pred             ecccccccCCCCccchhhHHHHHHHHHHHHHHH---------------ccCCcEEEEEeCCCccCc
Q 022418          168 ASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL---------------CEYGIRINCISPFAIPTP  218 (297)
Q Consensus       168 ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el---------------~~~~i~v~~v~pG~v~t~  218 (297)
                      .=...+...+--.+-+.++.-.+.+......++               .+.+|.+.+++-|-+-++
T Consensus       141 ei~E~HH~~K~DaPSGTA~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~R~g~~~g~  206 (257)
T PRK00048        141 EIIEAHHRHKVDAPSGTALKLAEAIAEARGRDLKEVAVYGREGATGARVKGEIGIHSVRGGDIVGE  206 (257)
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHhhcccccccceeccCCccCCcCCCCccEEEEEcCCceEE
Confidence            112333333444455777766666665543221               013688999998877665

>smart00829 PKS_ER Enoylreductase

Probab=94.78  E-value=0.15  Score=43.96  Aligned_cols=82  Identities=20%  Similarity=0.177  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|..++......|++|+.++++.++.+.. ++++..... ..|..+++..++ +...... .++|.
T Consensus       103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~-~~~d~  178 (288)
T smart00829      103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL-RELGIPDDH-IFSSRDLSFADE-ILRATGG-RGVDV  178 (288)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhh-eeeCCCccHHHH-HHHHhCC-CCcEE
Confidence            3578999999999999999988888999999999988876655 444431011 112222222222 2222111 25888


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       179 vi~~~~  184 (288)
T smart00829      179 VLNSLA  184 (288)
T ss_pred             EEeCCC
Confidence            887665

Enoylreductase in Polyketide synthases.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.77  E-value=0.23  Score=44.37  Aligned_cols=76  Identities=18%  Similarity=0.265  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |.+++|+|+++++|.+++...... |++|+.+.++.++.+.+ ++++.. +++  |..+  ...+.+.+.  ..+++|++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~-~~~--~~~~--~~~~~i~~~--~~~~vd~v  220 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAH-HVI--DHSK--PLKAQLEKL--GLEAVSYV  220 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCC-EEE--ECCC--CHHHHHHHh--cCCCCCEE
Confidence            789999999999999988766666 99999998888766555 445542 222  2111  222223332  12368999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       221 l~~~~  225 (336)
T TIGR02817       221 FSLTH  225 (336)
T ss_pred             EEcCC
Confidence            87654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.1  Score=45.88  Aligned_cols=40  Identities=28%  Similarity=0.415  Sum_probs=35.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.++.....
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~  192 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK  192 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence            4799999999999999999999999999999988765443

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.73  E-value=0.14  Score=39.47  Aligned_cols=84  Identities=17%  Similarity=0.170  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh-----------CCCeeEEEecCCCHHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL-----------GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~-----------~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ..++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..+.....+           -.....+.+-+.| +.+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            357888888 899999999999999998776 45554444443332           1234455555655 478888888


Q ss_pred             HHHH--cCCccEEEECccCC
Q 022418          102 TISK--HNQLDIMYNNAGVA  119 (297)
Q Consensus       102 ~~~~--~g~id~li~~ag~~  119 (297)
                      +...  +.+=.+++|++|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8754  32335899999976

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08223 hypothetical protein; Validated

Probab=94.72  E-value=0.093  Score=46.17  Aligned_cols=38  Identities=26%  Similarity=0.412  Sum_probs=32.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4689999999998 8999999999999998 477777654

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.70  E-value=0.96  Score=40.65  Aligned_cols=114  Identities=19%  Similarity=0.286  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCC--C---e-eEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGP--N---A-TFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~--~---v-~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +.+++.|+|+ |.+|..++..++..| ..++++|.+.+.++...-++..  .   . ..+.. .++.+    .+      
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~----~l------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYE----DI------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHH----Hh------
Confidence            5678999997 899999999999998 6899999988765432222210  0   0 01111 12222    11      


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEeccc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVT  171 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~  171 (297)
                       ...|++|..+|....+     ..+.   .+.+..|..    +.+.+.+.+.+. ..+.++++|.-.
T Consensus        72 -~~ADiVVitag~~~~~-----g~~r---~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 -KDSDVVVITAGVQRKE-----EMTR---EDLLTINGK----IMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             -CCCCEEEECCCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecChH
Confidence             2679999999875211     1222   445566664    344444444332 345577776533

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=94.69  E-value=0.27  Score=42.33  Aligned_cols=82  Identities=18%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..|.+++|.|+++++|..++......|++|+.++++.++.+...+ .+.... ...|..+.+..+++.+ ... ...+|.
T Consensus       107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~d~  182 (293)
T cd05195         107 QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRE-LGGPVD-HIFSSRDLSFADGILR-ATG-GRGVDV  182 (293)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-hCCCcc-eEeecCchhHHHHHHH-HhC-CCCceE
Confidence            357899999999999999998888899999999988776655543 221111 1223333322222222 211 125899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       183 vi~~~~  188 (293)
T cd05195         183 VLNSLS  188 (293)
T ss_pred             EEeCCC
Confidence            997776

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PRK05442 malate dehydrogenase; Provisional

Probab=94.68  E-value=0.19  Score=45.27  Aligned_cols=114  Identities=15%  Similarity=0.096  Sum_probs=64.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHhCCCeeEEE--ecCCCHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-------KVVIADIQHQ--LGQQTAKELGPNATFIA--CDVTKESDVSDAVDFTI  103 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~~~~~v~~~~--~D~s~~~~i~~~~~~~~  103 (297)
                      +++.|+|++|.+|..++..++..|.       .++++|.+++  +++...-++.+-.....  ..++         ....
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~---------~~~y   75 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT---------DDPN   75 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe---------cChH
Confidence            5889999999999999999988664       6889998643  23222222210000000  0011         0011


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-C-CCceEEEEec
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-R-RSGCILCTAS  169 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~g~iv~vss  169 (297)
                      +....-|++|..||...   ++  ..+.   .+.+..|+.    +++.+.+.+.+ . ..+.++++|.
T Consensus        76 ~~~~daDiVVitaG~~~---k~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 VAFKDADVALLVGARPR---GP--GMER---KDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHhCCCCEEEEeCCCCC---CC--CCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            12237899999999652   11  1233   455666665    45555555544 2 3567777764

>PRK14967 putative methyltransferase; Provisional

Probab=94.68  E-value=0.92  Score=38.38  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+..++-.|++.|.   ++..+++.|. +|++++.+...++...+..   +.++.++..|+.+.      +.     .+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence            35688999987654   3444556666 8999999987665444332   34566666676431      11     147


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|.+|.|....
T Consensus       102 fD~Vi~npPy~  112 (223)
T PRK14967        102 FDVVVSNPPYV  112 (223)
T ss_pred             eeEEEECCCCC
Confidence            89999998654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.67  E-value=0.27  Score=45.36  Aligned_cols=73  Identities=12%  Similarity=0.166  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.|+++|+|++ -+|+.+++.+.+.|++|++++.+.+.....   ..+  ..+..|..|.+.+.+++++.     ++|.+
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~ad--~~~~~~~~d~~~l~~~~~~~-----~id~v   79 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VAH--RSHVIDMLDGDALRAVIERE-----KPDYI   79 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hhh--heEECCCCCHHHHHHHHHHh-----CCCEE
Confidence            55799999874 689999999999999999998876531111   111  24567888888777776643     68988


Q ss_pred             EECc
Q 022418          113 YNNA  116 (297)
Q Consensus       113 i~~a  116 (297)
                      +...
T Consensus        80 i~~~   83 (395)
T PRK09288         80 VPEI   83 (395)
T ss_pred             EEee
Confidence            7543

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.64  E-value=0.11  Score=37.49  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=35.6

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCC---CeEEEE-eCCchhHHHHHHHhC
Q 022418           37 ALITGAASGIGKATAAKFISNG---AKVVIA-DIQHQLGQQTAKELG   79 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G---~~Vi~~-~r~~~~~~~~~~~~~   79 (297)
                      +.|. |+|.+|.++++.|.+.|   .+|.+. +|++++.++..++.+
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            3444 66999999999999999   889855 999999999888765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.64  E-value=0.57  Score=41.74  Aligned_cols=112  Identities=21%  Similarity=0.252  Sum_probs=66.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCe------eEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNA------TFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v------~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +.|.|+|+ |++|.+++..|+.++.  .++++|.+++..+-..-++.+-.      ..+..| .+.+.+           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            46889999 9999999999988764  69999999665554433331111      112222 222222           


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                      ...|++|..||...++.     .+.   .+.++.|..-.-.+.+.+.+.-   ..+.++++|.-
T Consensus        68 ~~aDiVvitAG~prKpG-----mtR---~DLl~~Na~I~~~i~~~i~~~~---~d~ivlVvtNP  120 (313)
T COG0039          68 KGADIVVITAGVPRKPG-----MTR---LDLLEKNAKIVKDIAKAIAKYA---PDAIVLVVTNP  120 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-----CCH---HHHHHhhHHHHHHHHHHHHhhC---CCeEEEEecCc
Confidence            36899999999763221     333   4556666664444444443322   24666666643

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.59  E-value=0.22  Score=45.10  Aligned_cols=40  Identities=20%  Similarity=0.189  Sum_probs=36.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      .++.||++.|.|- |.||+++|+.+...|++|++.+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            5799999999999 999999999999999999999987643

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.57  E-value=0.49  Score=39.78  Aligned_cols=84  Identities=17%  Similarity=0.164  Sum_probs=56.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhC-------------CCeeEEEecCCCHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELG-------------PNATFIACDVTKESD   94 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~-------------~~v~~~~~D~s~~~~   94 (297)
                      .-+++||.|+|.|| |.+|..=++.|++.|++|++++-.. +.+....+...             .....+.+...|++-
T Consensus         7 ~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~l   85 (210)
T COG1648           7 FLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEEL   85 (210)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHH
Confidence            35799999999999 7888889999999999999887766 44444433321             124555666666555


Q ss_pred             HHHHHHHHHHHcCCccEEEECcc
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag  117 (297)
                      -+++.+...+.    .+++|.+.
T Consensus        86 n~~i~~~a~~~----~i~vNv~D  104 (210)
T COG1648          86 NERIAKAARER----RILVNVVD  104 (210)
T ss_pred             HHHHHHHHHHh----CCceeccC
Confidence            55555555433    35565554

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.56  E-value=0.2  Score=44.44  Aligned_cols=76  Identities=20%  Similarity=0.250  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +.+++|.|+++++|.+++......|++|+++++++++.+.. .+++.. .+  .|..+.+  ....+...  .+.+|.++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~--~~~~~~~~--~~~~d~vi  218 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGAS-EV--LDREDLL--DESKKPLL--KARWAGAI  218 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCc-EE--EcchhHH--HHHHHHhc--CCCccEEE
Confidence            46899999999999999998888999999999988776655 445432 12  2222211  12222221  12589998


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      ++.|
T Consensus       219 ~~~~  222 (325)
T cd05280         219 DTVG  222 (325)
T ss_pred             ECCc
Confidence            7765

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	297
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		4e-55
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-32
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-32
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-31
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-31
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		9e-31
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-29
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-28
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-28
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-28
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-28
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		8e-28
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-27
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-27
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-27
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-27
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-27
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-27
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-27
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-27
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-27
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		6e-27
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-27
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-27
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-27
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		8e-27
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-27
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		9e-27
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-26
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-26
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-26
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-26
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-26
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-26
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-26
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		6e-26
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		8e-26
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-25
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-25
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-25
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		4e-25
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-25
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		4e-25
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-25
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		7e-25
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-24
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-24
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-24
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-24
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-24
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-24
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-24
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		5e-24
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		7e-24
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		9e-24
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-23
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		1e-23
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-23
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-23
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-23
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		2e-23
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-23
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-23
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-23
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-23
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		6e-23
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-23
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-22
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-22
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		1e-22
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-22
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-22
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-22
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-22
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-22
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-22
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		7e-22
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		8e-22
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		8e-22
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-21
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		2e-21
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-21
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		3e-21
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-21
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-21
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-21
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-21
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		6e-21
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-21
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		8e-21
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-20
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-20
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-20
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-20
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-20
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-20
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-20
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-20
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-20
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-20
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		7e-20
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		7e-20
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-20
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-19
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		1e-19
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-19
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-19
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-19
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-19
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-19
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		4e-19
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		5e-19
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		7e-19
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-19
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		1e-18
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-18
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-18
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-18
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-18
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-18
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-18
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-18
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-18
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-18
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-18
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-18
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		5e-18
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		7e-18
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		7e-18
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-17
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-17
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-17
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-17
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-17
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		9e-17
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-16
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-16
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-16
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		1e-16
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-16
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-16
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-16
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-16
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-16
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		4e-16
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-16
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		5e-16
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		5e-16
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-15
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-15
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-15
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-15
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		3e-15
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-15
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		4e-15
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		4e-15
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		4e-15
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		5e-15
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		5e-15
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		5e-15
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		6e-15
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-14
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-14
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-14
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-14
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-14
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		5e-14
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-14
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		6e-14
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		6e-14
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		6e-14
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		7e-14
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-13
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-13
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-13
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-13
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		3e-13
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		4e-13
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		6e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		9e-13
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-12
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-12
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		1e-12
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-12
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-12
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-12
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		4e-12
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-12
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-12
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-12
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-12
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		9e-12
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		1e-11
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-11
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-11
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-11
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-11
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		2e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-11
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-11
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-11
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		6e-11
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		8e-11
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-10
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-10
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-10
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-10
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-10
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		3e-10
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		8e-10
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		9e-10
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		1e-09
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		1e-09
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		2e-09
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-09
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		3e-09
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		3e-09
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		3e-09
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		4e-09
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		4e-09
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		4e-09
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		4e-09
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		4e-09
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		4e-09
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		5e-09
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		5e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		7e-09
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		1e-08
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-08
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-08
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		2e-08
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		4e-08
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		5e-08
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		5e-08
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		9e-08
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-07
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-07
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-07
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		6e-07
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-06
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		4e-06
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		6e-06
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		3e-05
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		4e-05
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-04
3l6e_A	235	Crystal Structure Of Putative Short Chain Dehydroge		3e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		6e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 169/260 (65%), Gaps = 8/260 (3%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNA-TF 84
           + + +L++KVA+ITG A GIG+ TA  F+  GAKVVIADI    GQ+    +G P+  +F
Sbjct: 9   SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISF 68
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           + CDVTK+ DV + VD TI+KH +LDIM+ N GV   TP SI++   E F +VM INV G
Sbjct: 69  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 128
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCEY 203
                KH+ RVMIP + G I+ TAS++    G    H Y+ +K A++GL  S+  EL EY
Sbjct: 129 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+NC+SP+ + +P + +       GVD+SR+ EL +    L+GT     D+A+A  YL
Sbjct: 189 GIRVNCVSPYIVASPLLTDVF-----GVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 243
Query: 264 ASDDAKYVSGHNLVVDGGFT 283
           A D++KYVSG NLV+DGG+T
Sbjct: 244 AGDESKYVSGLNLVIDGGYT 263

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 22/258 (8%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA-------KELGPNATF 84
           L+ KVAL+TGA+ GIG+A A      GA VV+    +   +Q A       K+LG +A  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIA 58
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV    DV++ V  T+    Q+DI+ NNAGV       ++ +  E +D V+  N++G
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLKG 116
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V    K  +R M+ +R G I+  ASV G+ G   Q  Y  +K+ +IGL K+ A EL    
Sbjct: 117 VFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRN 176
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           I +N I+P      F+  +M+ +      + +L+L+ +         E  DIANA  + A
Sbjct: 177 ITVNAIAP-----GFIATDMTDVLDENIKAEMLKLIPA-----AQFGEAQDIANAVTFFA 226
Query: 265 SDDAKYVSGHNLVVDGGF 282
           SD +KY++G  L VDGG 
Sbjct: 227 SDQSKYITGQTLNVDGGM 244

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK----ELGPN 81
           S+ + +  ++V LITG  SG+G+ATA +  + GAK+ + D+  + G + +K    E  P+
Sbjct: 5   SSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE-GLEASKAAVLETAPD 63
Query: 82  ATFIA--CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
           A  +    DV+ E+ V   V  T  +  ++D  +NNAG+  K            FD+V+ 
Sbjct: 64  AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVS 122
Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           IN+RGV  G++   ++M  + SG ++ TASV G+ G   Q  Y+ +K  ++GL ++ A E
Sbjct: 123 INLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 182
Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
              YGIRIN I+P AI TP V   M Q+          E +         + E  +IA  
Sbjct: 183 YGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN--PSKRYGEAPEIAAV 240
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
             +L SDDA YV+   + +DGG
Sbjct: 241 VAFLLSDDASYVNATVVPIDGG 262

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 142/262 (54%), Gaps = 20/262 (7%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA 86
           + L+ KV ++TGA SGIG+A A KF  N + VV  ++      Q  +EL   G     + 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGV 145
            DV+K+ DV + V  T   ++++D++ NNAG+    TP  + +++ E++++V+ +N+   
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP--VAEVSDELWERVLAVNLYSA 120
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               +    +M+ +  G I+ TAS+ G+ GG A   Y+V+K  +IGL +S+AA   + GI
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGV----LEGTHCEPNDIANAAL 261
           R   + P  + T            G+ +S+  EL   T      L     EP DIAN  +
Sbjct: 181 RAVAVLPGTVKTNI----------GLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIV 230
Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           +LASD+A +V+G  +VVDGG T
Sbjct: 231 FLASDEASFVNGDAVVVDGGLT 252

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 6/257 (2%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           L  +S  L ++V ++TG  SGIG+ATA  F  NGA VV+AD+      + A E+G  A  
Sbjct: 18  LYFQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG 77
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV+   D    V+ T +K  ++D++ NNAG    T  ++V +  E +D++  +NV+G
Sbjct: 78  VRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFG--TTGNVVTIPEETWDRIXSVNVKG 135
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           +    K+   V      G I+ T S T       +  Y  SK AI  L ++ A +  + G
Sbjct: 136 IFLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEG 195
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+N ++P  I +P+     ++I+A       L   ++   +        +IA A L+LA
Sbjct: 196 IRVNAVAPGTIDSPY----FTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLA 251
Query: 265 SDDAKYVSGHNLVVDGG 281
           SD +++ +G  L VDGG
Sbjct: 252 SDRSRFATGSILTVDGG 268

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  130 bits (327), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 17/253 (6%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S +L  KVAL++G A G+G +     ++ GAKVV  DI  + G+  A EL   A ++  D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT+ +    AVD  ++    L ++ NNAG+      +I D  L  + +++ +N+ GV  G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           I+   + M     G I+  +S+ GL G +A H Y+ +K A+ GL KS A EL   GIR+N
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I P  + TP                 + E ++ T +  G   EP +++N  +YLASD++
Sbjct: 180 SIHPGLVKTPMT-------------DWVPEDIFQTAL--GRAAEPVEVSNLVVYLASDES 224
Query: 269 KYVSGHNLVVDGG 281
            Y +G   VVDGG
Sbjct: 225 SYSTGAEFVVDGG 237

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 132/256 (51%), Gaps = 23/256 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S +L  KVAL++G A G G +     ++ GAKVV  DI  + G+  A EL   A ++  D
Sbjct: 2   SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLD 61
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT+ +    AVD  ++    L ++ NNAG+      +I D  L  + +++ +N+ GV  G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           I+   +       G I+  +S+ GL G +A H Y+ +K A+ GL KS A EL   GIR+N
Sbjct: 120 IRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 209 CISPFAIPTP---FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            I P  + TP   +V E++ Q   G  A                  EP +++N  +YLAS
Sbjct: 180 SIHPGLVKTPXTDWVPEDIFQTALGRAA------------------EPVEVSNLVVYLAS 221
Query: 266 DDAKYVSGHNLVVDGG 281
           D++ Y +G   VVDGG
Sbjct: 222 DESSYSTGAEFVVDGG 237

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A +VT 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNAG+       ++ +  E +  +M  N+  +    K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KSMA E+   G+ +N ++
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P AI T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 188 PGAIETDMTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 233
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 126/258 (48%), Gaps = 15/258 (5%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
           +KVAL+TGA  GIGKA A + + +G  V IAD      +  A E+   G +A  +  DV+
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS 61
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V  AV+         D++ NNAGVA  TP  I  +  E+ D+V  INV+GV+ GI+
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP--IESITPEIVDKVYNINVKGVIWGIQ 119
Query: 151 HSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
            +          G I+   S  G +G      YS SK A+ GL ++ A +L   GI +N 
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 179
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG-----VLEGTHCEPNDIANAALYLA 264
             P  + TP   E   Q    V  +    L Y T      +  G   EP D+A    YLA
Sbjct: 180 YCPGIVKTPMWAEIDRQ----VSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA 235
Query: 265 SDDAKYVSGHNLVVDGGF 282
           S D+ Y++G +L++DGG 
Sbjct: 236 SPDSDYMTGQSLLIDGGM 253

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 13/256 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE----LGPNATFIACDVT 90
           +VA++TGA+SG G A A +F++ G +V   D+  +  ++TA+            +  DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN-LEVFDQVMRINVRGVVAGI 149
            E DV+ A+  T+ +   +D++ NNAG+   +   ++    +E FD+VM +NVRG+  G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +     M+ + +G I+  ASV  L+    +  Y+ SK A++ L KS+A +    GIR N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           + P  I TP     + Q         L + V +  + +        +A+A ++LA +DA 
Sbjct: 183 VCPGMIETPMTQWRLDQ-------PELRDQVLAR-IPQKEIGTAAQVADAVMFLAGEDAT 234
Query: 270 YVSGHNLVVDGGFTSF 285
           YV+G  LV+DG +T+ 
Sbjct: 235 YVNGAALVMDGAYTAI 250

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A +VT 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNAG+       ++ +  E +  +M  N+  +    K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KSMA E+   G+ +N ++
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 188 PGFIETDMTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 233
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  120 bits (302), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 28/267 (10%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNA-TFIA 86
           S +L+ KVA+ITG   GIG A A KF+  GAKV+I D    +G++ AK +G P+   F  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D + E   +   D T      +  + NNAG+A    +S+ +     + +++ +N+ GV 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVF 118
Query: 147 AGIKHSTRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE--LCEY 203
            G +   + M  +  G  I+  +S+ G +G  +   Y+ SK A+  + KS A +  L +Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 204 GIRINCISPFAIPTPFV------MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            +R+N + P  I TP V       E MSQ                T    G   EPNDIA
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQ---------------RTKTPMGHIGEPNDIA 223
Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTS 284
              +YLAS+++K+ +G   VVDGG+T+
Sbjct: 224 YICVYLASNESKFATGSEFVVDGGYTA 250

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 19/258 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K ALITGA++GIGK  A  +   GA+V +A       Q  A E+   G  A  I CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT+   V   +D    +   +DI   NAG+   + ++++D+ LE F ++   NV GV   
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV--SVQAMLDMPLEEFQRIQDTNVTGVFLT 147
Query: 149 IKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCEYGI 205
            + + R M+ +   G I+ TAS++G +  + Q    Y  SK+A++ L K+MA EL  + I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N +SP  I T  V E ++  +A          ++   +  G    P ++    LYLAS
Sbjct: 208 RVNSVSPGYIRTELV-EPLADYHA----------LWEPKIPLGRMGRPEELTGLYLYLAS 256
Query: 266 DDAKYVSGHNLVVDGGFT 283
             + Y++G ++V+DGG+T
Sbjct: 257 AASSYMTGSDIVIDGGYT 274

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A +VT 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNAG+       ++ +  E +  +M  N+  +    K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  ++ +K+ +IG  KSMA E+   G+ +N ++
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 188 PGFIETDMTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 233
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 20/261 (7%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ K ALITG+A GIG+A A  ++  GA+V IADI  +  + TA E+GP A  IA DVT
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            ++ +   V   + +   +DI+ NNA +    P  IV++  E +D++  INV G +  ++
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFDLAP--IVEITRESYDRLFAINVSGTLFMMQ 119
Query: 151 HSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R MI   R G I+  AS  G  G      Y  +K+A+I L +S    L  +GI +N 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRL---------LELVYSTGVLEGTHCEPNDIANAA 260
           I+P  +          + + GVDA             +      V  G      D+   A
Sbjct: 180 IAPGVVD--------GEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231
Query: 261 LYLASDDAKYVSGHNLVVDGG 281
           ++LA+ +A Y+      VDGG
Sbjct: 232 IFLATPEADYIVAQTYNVDGG 252

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
           KL+ KV+L+TG+  GIG+A A K  S G+ V+I     +  +  A+E+    G  A  + 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            ++  E  ++ A +   +  + +DI+ NNAG+     +  + ++L  +++V+++N+ G  
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLTGTF 121
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              ++S R MI +R G I+  +SV G  G + Q  YS +K+ +IG  KS+A EL    + 
Sbjct: 122 LVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVL 181
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N ++P      F+  +M+ +      S  ++  Y   +  G    P ++AN  L+L S+
Sbjct: 182 VNAVAP-----GFIETDMTAVL-----SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSE 231
Query: 267 DAKYVSGHNLVVDGGF 282
            A Y++G  + V+GG 
Sbjct: 232 LASYITGEVIHVNGGM 247

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A +VT 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNA  A      ++ +  E +  +M  N+  +    K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNA--AITRDNLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KSMA E+   G+ +N ++
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 188 PGFIETDMTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 233
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
            E K+AL+TGA+ GIG+A A    + GAKV+         Q  +  LG N   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + +   ++   ++  ++DI+ NNAG+       ++ +  E ++ ++  N+  V    K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KS+A E+   GI +N ++
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        ++ + I A V A RL                  +IANA  +LASD+
Sbjct: 181 PGFIETDMTRALSDDQRAGILAQVPAGRL--------------GGAQEIANAVAFLASDE 226
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 227 AAYITGETLHVNGGM 241

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 15/264 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKELGPNATFIAC 87
           L++KV +ITG ++G+G+A A +F    AKVVI    ++      ++  +E G  A  +  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVTKE DV + V   I +   LD+M NNAGV    P    +L+L+ +++V+  N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH--ELSLDNWNKVIDTNLTGAFL 130
Query: 148 GIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           G + + +  +     G ++  +SV  ++       Y+ SK  +  + +++A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P A+ TP   E+ +      D   ++ + Y          +P ++A  A +LAS 
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYI--------GKPEEVAAVAAFLASS 242
Query: 267 DAKYVSGHNLVVDGGFTSFKNLKL 290
            A YV+G  L  DGG T + + + 
Sbjct: 243 QASYVTGITLFADGGMTKYPSFQF 266

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKELGPNATFIAC 87
           L++KV +ITG ++G+G+A A +F    AKVVI    ++      ++  +E G  A  +  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVTKE DV + V   I +   LD+M NNAGV    P    +L+L+ +++V+  N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH--ELSLDNWNKVIDTNLTGAFL 130
Query: 148 GIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           G + + +  +     G ++  +SV  ++       Y+ SK  +  + +++A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P A+ TP   E+ +      D   ++ + Y          +P ++A  A +LAS 
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYI--------GKPEEVAAVAAFLASS 242
Query: 267 DAKYVSGHNLVVDGGFTSFKNLK 289
            A YV+G  L  DGG T + + +
Sbjct: 243 QASYVTGITLFADGGMTKYPSFQ 265

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKELGPNATFIAC 87
           L++KV +ITG ++G+G+A A +F    AKVVI    ++      ++  +E G  A  +  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVTKE DV + V   I +   LD+M NNAGV    P    +L+L+ +++V+  N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH--ELSLDNWNKVIDTNLTGAFL 130
Query: 148 GIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           G + + +  +     G ++  +SV  ++       Y+ SK  +  + +++A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P A+ TP   E+ +      D   ++ + Y          +P ++A  A +LAS 
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYI--------GKPEEVAAVAAFLASS 242
Query: 267 DAKYVSGHNLVVDGGFTSFKNLK 289
            A YV+G  L  DGG T + + +
Sbjct: 243 QASYVTGITLFADGGMTKYPSFQ 265

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 17/266 (6%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATF 84
           + LE KV +ITG+++G+GK+ A +F +  AKVV+      D  + + ++  K++G  A  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAIA 61
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT ESDV + V   I +  +LD+M NNAG+A   P S  +++L  +++V+  N+ G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLA--NPVSSHEMSLSDWNKVIDTNLTG 119
Query: 145 VVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              G + + +  +     G ++  +SV   +       Y+ SK  +  + +++A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N I P AI TP   E+ +      D   ++ + Y          EP +IA  A +L
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI--------GEPEEIAAVAAWL 231
Query: 264 ASDDAKYVSGHNLVVDGGFTSFKNLK 289
           AS +A YV+G  L  DGG T + + +
Sbjct: 232 ASSEASYVTGITLFADGGMTQYPSFQ 257

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A +VT 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNA +       ++ +  E +  +M  N+  +    K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KSMA E+   G+ +N ++
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 188 PGFIETDMTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 233
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 140/263 (53%), Gaps = 23/263 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S  LE KVALITGA SG G+  A +F   GAKVVI D      ++ A E+G  A  +A D
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAAD 63
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++KE+DV  AV+  +SK  ++DI+ NNAG+  K P++   +  E FD+++ +NVRGV   
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYL- 121
Query: 149 IKHSTRVMIP--RRSG-----CILCTASVTGLLGGLAQHT---YSVSKSAIIGLVKSMAA 198
               T  +IP  + +G     C++   + TG   G  +     Y+ +K  ++ + K++A 
Sbjct: 122 ---MTSKLIPHFKENGAKGQECVILNVASTG--AGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 199 ELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           EL    IR+  ++P A  TP +   M +       S  +   +   +  G   +P+D+A 
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGE------DSEEIRKKFRDSIPMGRLLKPDDLAE 230
Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           AA +L S  A  ++G  L VDGG
Sbjct: 231 AAAFLCSPQASMITGVALDVDGG 253

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 28/267 (10%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNA-TFIA 86
           S +L+ KVA+ITG   GIG A A KF+  GAKV+I      +G++ AK +G P+   F  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D + E   +   D T      +  + NNAG+A    +S+ +     + +++ +N+ GV 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVF 118
Query: 147 AGIKHSTRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE--LCEY 203
            G +   + M  +  G  I+  +S+ G +G  +   Y+ SK A+  + KS A +  L +Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 204 GIRINCISPFAIPTPFV------MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            +R+N + P  I TP V       E MSQ                T    G   EPNDIA
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQ---------------RTKTPMGHIGEPNDIA 223
Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTS 284
              +YLAS+++K+ +G   VVDGG+T+
Sbjct: 224 YICVYLASNESKFATGSEFVVDGGYTA 250

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 17/266 (6%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATF 84
           + LE KV +ITG+++G+GK+ A +F +  AKVV+      D  + + ++  K++G  A  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAIA 61
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT ESDV + V   I +  +LD+M NNAG+  + P S  +++L  +++V+  N+ G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTG 119
Query: 145 VVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              G + + +  +     G ++  +SV   +       Y+ SK  +  + K++A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPK 179
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N I P AI TP   E+ +      D   ++ + Y          EP +IA  A +L
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI--------GEPEEIAAVAAWL 231
Query: 264 ASDDAKYVSGHNLVVDGGFTSFKNLK 289
           AS +A YV+G  L  DGG T + + +
Sbjct: 232 ASSEASYVTGITLFADGGMTLYPSFQ 257

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 128/258 (49%), Gaps = 11/258 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K  +ITG A G+G   A + ++ GA+VV+AD+  + G  TA+ELG  A +   DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E D    V +   +   +D + NNAG++  T   +   ++E F +V+ IN+ GV  G+K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKT 120
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M     G I+  +S  GL+G     +Y  SK  + GL K  A EL    IR+N + 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P    TP   E       G+   R  E  Y    +     EP +IA A + L SD + YV
Sbjct: 181 PGMTYTPMTAE------TGI---RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231
Query: 272 SGHNLVVDGGFTSFKNLK 289
           +G  L VDGG+T+   +K
Sbjct: 232 TGAELAVDGGWTTGPTVK 249

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
            E K+AL+TGA+ GIG+A A    + GAKV+         Q  +  LG N   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + +   ++   ++  ++DI+ NNAG+       ++ +  E ++ ++  N+  V    K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  ++ +K+ +IG  KS+A E+   GI +N ++
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        ++ + I A V A RL                  +IANA  +LASD+
Sbjct: 181 PGFIETDMTRALSDDQRAGILAQVPAGRL--------------GGAQEIANAVAFLASDE 226
Query: 268 AKYVSGHNLVVDGGF 282
           A Y++G  L V+GG 
Sbjct: 227 AAYITGETLHVNGGM 241

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 17/266 (6%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATF 84
           + LE KV +ITG+++G+GK+ A +F +  AKVV+      D  + + ++  K++G  A  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAIA 61
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT ESDV + V   I +  +LD+M NNAG+  + P S  +++L  +++V+  N+ G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTG 119
Query: 145 VVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              G + + +  +     G ++  +SV   +       Y+ SK  +  + +++A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N I P AI TP   E+ +      D   ++ + Y          EP +IA  A +L
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI--------GEPEEIAAVAAWL 231
Query: 264 ASDDAKYVSGHNLVVDGGFTSFKNLK 289
           AS +A YV+G  L  DGG T + + +
Sbjct: 232 ASSEASYVTGITLFADGGMTQYPSFQ 257

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K  +ITG A G+G   A + ++ GA+VV+AD+  + G  TA+ELG  A +   DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E D    V +   +   +D + NNAG++  T   +   ++E F +V+ IN+ GV  G+K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKT 120
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M     G I+  +S  GL+G     +Y  SK  + GL K  A EL    IR+N + 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P    TP   E       G+   R  E  Y    + G   EP +IA A + L SD + YV
Sbjct: 181 PGMTYTPMTAE------TGI---RQGEGNYPNTPM-GRVGEPGEIAGAVVKLLSDTSSYV 230
Query: 272 SGHNLVVDGGFTSFKNLK 289
           +G  L VDGG+T+   +K
Sbjct: 231 TGAELAVDGGWTTGPTVK 248

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 15/254 (5%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQ--QTAKELGPNATFIACDV 89
           E KVAL+TGA  GIG+  A     + + V+ I+  Q          K  G  ++  A DV
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           +K+ ++S+ ++  +++H  +DI+ NNAG+        + +  + ++ V+R N+  +    
Sbjct: 103 SKKEEISEVINKILTEHKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTNLNSLFYIT 160
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +  ++ MI  R G I+  +S+ GL G + Q  YS SK+ +IG  KS+A EL    I +N 
Sbjct: 161 QPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNA 220
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           I+P  I +    +   QI   + ++          +  G    P ++AN A +L+SD + 
Sbjct: 221 IAPGFISSDMTDKISEQIKKNIISN----------IPAGRMGTPEEVANLACFLSSDKSG 270
Query: 270 YVSGHNLVVDGGFT 283
           Y++G   V+DGG +
Sbjct: 271 YINGRVFVIDGGLS 284

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---GQQTAKELGPNATFI 85
           S+K   KV L+TGA   IG ATA +    G  + + D+  +     + + +E G  A   
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSY 61
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGV-ACKTPRSIVDLNLEVFDQVMRINVRG 144
            CDVT E  V   VD  +    ++D ++NNAG      P  + D   + F +V+ INV G
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP--VQDYPSDDFARVLTINVTG 119
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
               +K  +R MI +  G I+ TAS+ G+ G      Y  SK AII L ++ A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRL--------LELVYSTGVLEGTHCEPNDI 256
           IR+N ISP  +   F+ E   ++ A V +            +++ S  +    + + N+I
Sbjct: 180 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR--YGDINEI 237
Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
                +L  DD+ +++G NL + GG
Sbjct: 238 PGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 17/266 (6%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATF 84
           + LE KV +ITG+++G+GK+ A +F +  AKVV+      D  + + ++  K++G  A  
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAIA 61
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT ESDV + V   I +  +LD+M NNAG+  + P S  +++L  +++V+  N+ G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTG 119
Query: 145 VVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              G + + +  +     G ++  +SV   +       Y+ SK  +  + +++A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIR+N I P AI TP   E+ +      D   ++ + Y          EP +IA  A +L
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI--------GEPEEIAAVAAWL 231
Query: 264 ASDDAKYVSGHNLVVDGGFTSFKNLK 289
           AS +A YV+G  L  DGG T + + +
Sbjct: 232 ASSEASYVTGITLFADGGMTLYPSFQ 257

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 17/263 (6%)
Query: 28  ESRK-LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNAT 83
           E RK LE KVAL+T +  GIG A A +   +GA VV++  + +   +T   L   G + T
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRIN 141
              C V K  D    V   ++ H  +DI+ +NA V    P   +I+D   EV+D+++ +N
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVN 123
Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           V+  V   K     M  R  G +L  +SV           Y+VSK+A++GL K++A EL 
Sbjct: 124 VKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183
Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
              IR+NC++P  I T F     SQ+   +D +R   +  S  +       P D A    
Sbjct: 184 PRNIRVNCLAPGLIKTNF-----SQVLW-MDKARKEYMKESLRIRR--LGNPEDCAGIVS 235
Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +L S+DA Y++G  +VV GG  S
Sbjct: 236 FLCSEDASYITGETVVVGGGTAS 258

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 142/299 (47%), Gaps = 52/299 (17%)
Query: 19  ERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------- 71
           E  ++G  + + K+E KVA ITGAA G G++ A      GA ++  D+  QL        
Sbjct: 13  EAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMS 72
Query: 72  -----QQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVAC--- 120
                 +T ++   LG        DV     +  AVD  +++  +LDI+  NA +A    
Sbjct: 73  TPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT 132
Query: 121 -------KTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL 173
                  KT R ++D+NL       R+ +  ++AG          +R G I+ T+S+ GL
Sbjct: 133 RLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG----------KRGGSIVFTSSIGGL 182
Query: 174 LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD- 232
            G      Y  SK  + GL+++MA EL    IR+N + P ++ TP ++ E +      D 
Sbjct: 183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDL 242
Query: 233 ----------ASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                     ASR +       VL   + EP DI+NA L+L SDDA+Y++G +L VDGG
Sbjct: 243 ENPTVEDFQVASRQMH------VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 9/259 (3%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT 83
           G  + + +LE KVA+ITGA  GIG  T+      GA+VV+AD+        A  +G  A 
Sbjct: 1   GPGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAV 60
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
               D+T E  V   +DFTI    +LDI+ NNA  +      +  + ++V+D    +N R
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G +   K++   +I    G I+  +S T          Y+ +K+AI  L + +A +   +
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G+R N I+P  + TP +   + Q    VD       +++T  L G   EP++IA    +L
Sbjct: 181 GVRCNAIAPGLVRTPRLEVGLPQPI--VD-------IFATHHLAGRIGEPHEIAELVCFL 231
Query: 264 ASDDAKYVSGHNLVVDGGF 282
           ASD A +++G  +  D G 
Sbjct: 232 ASDRAAFITGQVIAADSGL 250

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 22/266 (8%)
Query: 23  RGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNA 82
           RG    +  L +++AL+TGA+ GIG+A A +  + GAKV + +     G          A
Sbjct: 17  RGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAV-NYASSAGAADEVVAAIAA 75
Query: 83  TFIA-----CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
                     DV++ES+V       I +  +LD++ NNAG+   T   ++ +  + +  V
Sbjct: 76  AGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL--LLRMKRDDWQSV 133
Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           + +N+ GV    + + ++M+ +RSG I+  ASV G +G   Q  YS +K+ +IGL K++A
Sbjct: 134 LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVA 193
Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            EL   GI +N ++P  I T    E        + A +LLE++       G + E  ++A
Sbjct: 194 KELASRGITVNAVAPGFIATDMTSE--------LAAEKLLEVIPL-----GRYGEAAEVA 240
Query: 258 NAALYLASDD-AKYVSGHNLVVDGGF 282
               +LA+D  A Y++G  + +DGG 
Sbjct: 241 GVVRFLAADPAAAYITGQVINIDGGL 266

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 37/289 (12%)
Query: 21  CSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-----LGQQTA 75
            +RG      +L+ KVA ITGAA G G+  A +   +GA +V  D+  Q       Q + 
Sbjct: 33  SARGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSP 92
Query: 76  KELGPNATFIACD----VTKESDVSD------AVDFTISKHNQLDIMYNNAGVACKTPRS 125
           +EL      +       + +++DV D       VD  +++   +DI+ +N G++ +    
Sbjct: 93  EELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG--E 150
Query: 126 IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-----RSGCILCTASVTGLLGGLAQH 180
           +V L  + +  +++ N+     G  H+ R ++P      + G ++  +S  GL G   Q 
Sbjct: 151 VVSLTDQQWSDILQTNL----IGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQS 206
Query: 181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM-EEMSQIY-------AGVD 232
            Y+ SK  + GL+ S+A E+  + IR+N ++P A+ T   + E++ +++          D
Sbjct: 207 HYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED 266
Query: 233 ASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
           A+   EL     +L     EP D++NA  +LASD+A+Y+ G  + VDGG
Sbjct: 267 AA---ELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIA 86
           +L+ K A++TG++ G+GKA A K  + GA +V+    A        +  K  G N     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV    DV + V   +    ++DI+ NNAG+   T   ++ ++ + +D V+  N++   
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVLNTNLKSAY 119
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              K  +++M+ ++SG I+   S+ G++G   Q  Y+ SK+ +IG  KS+A E    GI 
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIY 179
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
            N ++P  I T     +M+ +       ++ E+ Y   +       P ++AN   +LASD
Sbjct: 180 CNAVAPGIIKT-----DMTDVL----PDKVKEM-YLNNIPLKRFGTPEEVANVVGFLASD 229
Query: 267 DAKYVSGHNLVVDGGF 282
           D+ Y++G  + +DGG 
Sbjct: 230 DSNYITGQVINIDGGL 245

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 21/260 (8%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           +LE K+A++TGA+SGIG+A A  F   GAKVV+         +   E+   G  A  +A 
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAG 64
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV  E+     V+  + +   LD  +NNAG A      I  L++E + + +  N+     
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAG-ALGAMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCEYGIR 206
             K+    +     G +  T+S  G   G A    Y+ SK+ +IGLV+++A EL   GIR
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-----CEPNDIANAAL 261
           +N + P    TP      + +      +R        G +EG H       P +IA AAL
Sbjct: 184 VNALLPGGTDTP---ANFANLPGAAPETR--------GFVEGLHALKRIARPEEIAEAAL 232
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           YLASD A +V+G  L+ DGG
Sbjct: 233 YLASDGASFVTGAALLADGG 252

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 20/265 (7%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +  EKVA+ITG+++GIG+ATA  F   GAKV I     +  ++T +++        N   
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDL--NLEVFDQVMRINV 142
           +  DVT ++   + +  T+ K  +LDI+ NNAG A    +S      ++E +D  + +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           R V+A  K +   +   +   +  ++  +GL        YS++K+AI    ++ A +L +
Sbjct: 123 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 182
Query: 203 YGIRINCISPFAIPTPF-----VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           +GIR+N ISP  + T F     + EE S+ +    A+ + E V +     G   +P DIA
Sbjct: 183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT-MKECVPA-----GVMGQPQDIA 236
Query: 258 NAALYLAS-DDAKYVSGHNLVVDGG 281
               +LA    + Y+ GH LVVDGG
Sbjct: 237 EVIAFLADRKTSSYIIGHQLVVDGG 261

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 130/251 (51%), Gaps = 16/251 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K +LITGA+SGIG A A      G+KV+I+    +  +     L  N T   C++  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           + + S+     ISK + LDI+  NAG+   T    + +  + FD+V+ IN++      + 
Sbjct: 72  KEECSN----LISKTSNLDILVCNAGITSDTLA--IRMKDQDFDKVIDINLKANFILNRE 125
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           + + MI +R G I+  +S+ G+ G   Q  Y  SK+ +IG+ KS++ E+   GI +N ++
Sbjct: 126 AIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVA 185
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P      F+  +M+          +++      +  GT+  P D+A A  +LAS++A Y+
Sbjct: 186 P-----GFIKSDMTDKLNEKQREAIVQ-----KIPLGTYGIPEDVAYAVAFLASNNASYI 235
Query: 272 SGHNLVVDGGF 282
           +G  L V+GG 
Sbjct: 236 TGQTLHVNGGM 246

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           + +L+ KVAL+TG ASG+G       +  GAKV  +DI    GQQ A ELG  + F+  D
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHD 60
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+ E+D +  +     +   L+++ NNAG+    P  +    LE F ++++IN   V  G
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILL--PGDMETGRLEDFSRLLKINTESVFIG 118
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE---YGI 205
            +     M     G I+  ASV+  L       YS SK+A+  L ++ AA  C    Y I
Sbjct: 119 CQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRA-AALSCRKQGYAI 176
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYL 263
           R+N I P  I TP +   + +   GV      E+V     L   G    P  IA   L+L
Sbjct: 177 RVNSIHPDGIYTPMMQASLPK---GVSK----EMVLHDPKLNRAGRAYMPERIAQLVLFL 229
Query: 264 ASDDAKYVSGHNLVVD 279
           ASD++  +SG  L  D
Sbjct: 230 ASDESSVMSGSELHAD 245

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  KVA++TGA +GIG A A +    G  V+ ADI        A ++G  A     DV+ 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E  +   VD  ++    +D +  NAGV      S++D  +E FD+V+ IN+RG     KH
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDFDRVIAINLRGAWLCTKH 144
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   MI R  G I+  +S+ G +       Y +SK+ II L +  AAEL   GIR N + 
Sbjct: 145 AAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLL 204
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  + TP     M+     + A     ++     L+G    P ++A   ++L SDDA  +
Sbjct: 205 PAFVDTPMQQTAMAMFDGALGAGGARSMIAR---LQGRMAAPEEMAGIVVFLLSDDASMI 261
Query: 272 SGHNLVVDGG 281
           +G   + DGG
Sbjct: 262 TGTTQIADGG 271

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIACDVT 90
           K AL+TGA+ GIG++ A +    G  V +    +  + +   +  K  G ++  I  +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
              +V   +   +S+   LD++ NNAG+       ++ +  + +D V+  N++GV   I+
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGIT--RDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +T  M+ +RSG I+  +SV G +G   Q  Y  +K+ +IGL KS A EL   GI +N +
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P      F++ +M+   +     ++L     T +      +  DIAN   +LASD AKY
Sbjct: 189 AP-----GFIVSDMTDALSDELKEQML-----TQIPLARFGQDTDIANTVAFLASDKAKY 238
Query: 271 VSGHNLVVDGGF 282
           ++G  + V+GG 
Sbjct: 239 ITGQTIHVNGGM 250

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 25/258 (9%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L++K  LITGAA GIG+AT   F   GA++V  DI+    ++ A+ +G +   +  DV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP--VVXDVA 59
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVA-----CKTPRSIVDLNLEVFDQVMRINVRGV 145
             + V       ++   +LD + + AG+       K P       LE ++ V+R+N+ G 
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXP-------LEDWELVLRVNLTGS 112
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               K ++     +  G I+ TAS    LG L Q  Y+ S + ++GL +++A EL  +GI
Sbjct: 113 FLVAKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGI 171
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N ++P  I T    +   ++     A+  L          G   +P ++A AAL+L S
Sbjct: 172 RVNTLAPGFIETRXTAKVPEKVREKAIAATPL----------GRAGKPLEVAYAALFLLS 221
Query: 266 DDAKYVSGHNLVVDGGFT 283
           D++ +++G  L VDGG T
Sbjct: 222 DESSFITGQVLFVDGGRT 239

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 28/266 (10%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           ++LE K ALITG+A GIG+A A  ++  GA V IADI  +  +Q A E+GP A  +  DV
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDV 63
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T++  +  A+  T+     LDI+ NNA +    P  IV++  E ++++  INV G +  +
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFDLAP--IVEITRESYEKLFAINVAGTLFTL 121
Query: 150 KHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + + R  I + R G I+  AS  G  G      Y  +K+A+I L +S   +L ++ I +N
Sbjct: 122 QAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 209 CISPFAIPTPFVMEEMSQIYAGVDA-------------SRLLELVYSTGVLEGTHCEPND 255
            I+P  +          + + GVDA              RL+       V  G      D
Sbjct: 182 AIAPGVVD--------GEHWDGVDALFARYENRPRGEKKRLV----GEAVPFGRXGTAED 229
Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +   A++LAS ++ Y+      VDGG
Sbjct: 230 LTGXAIFLASAESDYIVSQTYNVDGG 255

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNAT 83
           T    L  KVAL+T +  GIG A A +   +GA VV++  + Q   Q    L   G + T
Sbjct: 8   TRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVT 67
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRIN 141
              C V K  D    V   +  H  +DI+ +NA V    P   SI+D+  EV+D+ + IN
Sbjct: 68  GTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAV---NPFFGSIMDVTEEVWDKTLDIN 124
Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           V+      K     M  R  G ++  +S+           Y+VSK+A++GL K++A EL 
Sbjct: 125 VKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELA 184
Query: 202 EYGIRINCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
              IR+NC++P  I T F   +  +  +  +  +  R+  L            EP D A 
Sbjct: 185 PRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRL-----------GEPEDCAG 233
Query: 259 AALYLASDDAKYVSGHNLVVDGGFTS 284
              +L S+DA Y++G  +VV GG  S
Sbjct: 234 IVSFLCSEDASYITGETVVVGGGTPS 259

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 27/262 (10%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA-KELGPNATFIAC 87
           +++L++K+A+ITG A+GIG+A A +F   GA + IAD+      + A + LG     + C
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKC 61
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV----- 142
           DV++  DV       IS   + DI+ NNAG+    P    +L  E + +   INV     
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFD--ELTFEQWKKTFEINVDSGFL 119
Query: 143 --RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
             +  V G+K +         G I+   S T  L   A   Y  +K+A IG  +++A++L
Sbjct: 120 MAKAFVPGMKRNGW-------GRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA-SRLLELVYSTGVLEGTHCEPNDIANA 259
            + GI +N I+P  + T     E S + A  D    +L+ +    V       P D+  A
Sbjct: 173 GKDGITVNAIAPSLVRT--ATTEASALSAMFDVLPNMLQAIPRLQV-------PLDLTGA 223
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
           A +LASDDA +++G  L VDGG
Sbjct: 224 AAFLASDDASFITGQTLAVDGG 245

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 17/249 (6%)
Query: 32  LEEKVALITGAA-SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP----NATFIA 86
           L+ KV L+T AA +GIG  TA + +  GA VVI+D   +   +T  +L          + 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDVT    V   +  T+ K  +LD++ NNAG+  +TP  +VD+  E +D+V+ + +  V+
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP--VVDMTDEEWDRVLNVTLTSVM 137
Query: 147 AGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              + + R        G I+  ASV G     +Q  Y+ +K+ ++ L +  A E  E+G+
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           RIN +SP +I     +E+ S       +S LL+ + S     G   EP ++A    +LAS
Sbjct: 198 RINAVSP-SIARHKFLEKTS-------SSELLDRLASDEAF-GRAAEPWEVAATIAFLAS 248
Query: 266 DDAKYVSGH 274
           D + Y++G 
Sbjct: 249 DYSSYMTGE 257

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 11/259 (4%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
             + +++L  K+A+ITGA SGIG A A +F++ GA+V I   +  +      E+G  A  
Sbjct: 20  FQSXTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG 79
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I  D    +++    +   ++  ++D+++ NAG     P  + ++  E +D     NV+G
Sbjct: 80  IQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLP--LGEVTEEQYDDTFDRNVKG 137
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+  ++ +  ++   R   ++ T S  G  G  A   Y+ SK+A+    ++   +L + G
Sbjct: 138 VLFTVQKALPLLA--RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRG 195
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAALY 262
           IRIN +SP    T  ++E      AG D  +   L+   +  V  G      ++A AAL+
Sbjct: 196 IRINTLSPGPTETTGLVE-----LAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALF 250
Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASDD+ +V+G  L VDGG
Sbjct: 251 LASDDSSFVTGAELFVDGG 269

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 54  FISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY 113
           F+++GA+VVI D     G+   +EL P A FI CDVT+E DV   V  TI +  +LD + 
Sbjct: 29  FVNSGARVVICDKDESGGRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87
Query: 114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP--RRS-GCILCTASV 170
           NNAG     P+   + + + F Q++ +N+ G        T++ +P  R+S G ++  +S+
Sbjct: 88  NNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYT----LTKLALPYLRKSQGNVINISSL 142
Query: 171 TGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG 230
            G +G      Y  +K A+  + K++A +   YG+R+NCISP  I TP   EE++ +   
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL-WEELAALMPD 201
Query: 231 VDASRLLELVYSTGVLE---GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
             AS         G+L    G   +P ++  AA++LAS +A + +G  L+V GG
Sbjct: 202 PRAS------IREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 27/283 (9%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------ 71
           G  + + KLE +VA ITGAA G G+A A +  + GA ++  DI  +L             
Sbjct: 1   GPGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDD 60
Query: 72  -QQTAKEL-GPNATFIACDV-TKESD-VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIV 127
             +T + +   N   +A  V T++ D +   VD  ++   +LDI+  NAGVA   P++  
Sbjct: 61  LSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA--PQAWD 118
Query: 128 DLNLEVFDQVMRINVRG----VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS 183
           D+  E F  VM INV G    V+AG   + R++   R G I+  +S  G+        Y+
Sbjct: 119 DITPEDFRDVMDINVTGTWNTVMAG---APRIIEGGRGGSIILISSAAGMKMQPFMIHYT 175
Query: 184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM-SQIYAGVDASRLLELVYS 242
            SK A+ GL ++ AAEL ++ IR+N + P  + TP    +M + +   ++ +  L  V  
Sbjct: 176 ASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL- 234
Query: 243 TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF 285
           T  L     EP DIA+   +LASD+++ V+   + VD G T +
Sbjct: 235 TPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY 277

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 9/250 (3%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K  L+TG A GIG+A A  F   GA V + D++ + G++ A+ +G    F   D+  E +
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDLEDERE 63
Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
               V+       ++D++ NNA +A   P S + + L  + +V+ +N+   +     + R
Sbjct: 64  RVRFVEEAAYALGRVDVLVNNAAIAA--PGSALTVRLPEWRRVLEVNLTAPMHLSALAAR 121
Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            M     G I+  ASV GL        Y+ SK  ++ L +S+A +L    IR+N ++P A
Sbjct: 122 EMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGA 181
Query: 215 IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH 274
           I T  V+E ++         R  E +++   L     +P ++A A L+LAS+ A +++G 
Sbjct: 182 IATEAVLEAIALSPDPERTRRDWEDLHALRRL----GKPEEVAEAVLFLASEKASFITGA 237
Query: 275 NLVVDGGFTS 284
            L VDGG T+
Sbjct: 238 ILPVDGGMTA 247

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  107 bits (267), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 130/268 (48%), Gaps = 31/268 (11%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPN 81
            ++++ +L+ K A+ITGA +GIGK  A  F + GA VV++DI          E   LG  
Sbjct: 2   FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A    CD+T E ++S   DF ISK  ++DI+ NNAG     P    D+ +  F +   +N
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP---FDMPMADFRRAYELN 118
Query: 142 VRGVVAGIKHSTRVMIPRRS----GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           V        H ++++ P       G IL   S+      +   +Y+ SK+A   LV++MA
Sbjct: 119 VFSFF----HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMA 174
Query: 198 AELCEYGIRINCISPFAIPT----PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
            +L E  IR+N I+P AI T      +  E+ Q        R L              +P
Sbjct: 175 FDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL-------------GQP 221
Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGG 281
            DIANAAL+L S  A +VSG  L V GG
Sbjct: 222 QDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 27/251 (10%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
            E K+AL+TGA+ GIG+A A    + GAKV+         Q  +  LG N   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + +   ++   ++  ++DI+ NNAG+       ++ +  E ++ ++  N+  V    K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+        +GG  Q  Y+ +K+ +IG  KS+A E+   GI +N ++
Sbjct: 121 VMRAMMKKRHGRIIT-------IGG--QANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  I T    ++ + I A V A RL                  +IANA  +LASD+A Y+
Sbjct: 172 PGFIETSD--DQRAGILAQVPAGRL--------------GGAQEIANAVAFLASDEAAYI 215
Query: 272 SGHNLVVDGGF 282
           +G  L V+GG 
Sbjct: 216 TGETLHVNGGM 226

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--CDVTKESDV 95
           L+TG   GIG A A  F   G KV I          T +   P   F+A  CD+T    V
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAI----------TYRSGEPPEGFLAVKCDITDTEQV 74
Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
             A       H  ++++  NAGV     + ++ ++ E F  V+  N+ G    +K + R 
Sbjct: 75  EQAYKEIEETHGPVEVLIANAGVT--KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA 132
Query: 156 MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI 215
           M+  + G ++  +SV GLLG   Q  Y+ SK+ ++G  +S+A EL    I  N ++P   
Sbjct: 133 MLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAP--- 189
Query: 216 PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN 275
              FV  +M+++      + ++     + V  G +  P +IA    +LASDDA Y++G  
Sbjct: 190 --GFVDTDMTKVLTDEQRANIV-----SQVPLGRYARPEEIAATVRFLASDDASYITGAV 242
Query: 276 LVVDGGF 282
           + VDGG 
Sbjct: 243 IPVDGGL 249

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 114/254 (44%), Gaps = 20/254 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N    A +VT 
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN 66
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              +   +     +   +DI+ NNAG+       +     E +  +   N+  +    K 
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LXRXKEEEWSDIXETNLTSIFRLSKA 124
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R    +R G I+   SV G  G   Q  Y+ +K+ +IG  KS A E+   G+ +N ++
Sbjct: 125 VLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVA 184
Query: 212 PFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I T        E+ +   A V A RL               +P +IA+A  +LAS +
Sbjct: 185 PGFIETDXTKALNDEQRTATLAQVPAGRL--------------GDPREIASAVAFLASPE 230
Query: 268 AKYVSGHNLVVDGG 281
           A Y++G  L V+GG
Sbjct: 231 AAYITGETLHVNGG 244

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 136/266 (51%), Gaps = 20/266 (7%)
Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATF 84
           E  +L+ +VA++TG A  IG A        GA+V+IAD+   +  +  ++L   G + + 
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT    V +AV     +  ++DI+   AG+ C +     D+    + + + IN+ G
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQVDINLNG 125
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAELCE 202
           +    +   R+M+ ++ G I+   S++GL+    Q    Y+ SK+ +   ++S+AAE   
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185
Query: 203 YGIRINCISPFAIPTP---FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           +GIR N ++P  I T    F ME+  ++Y   DA       +  G   G   +P+++A+ 
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEK-PELY---DA-------WIAGTPMGRVGQPDEVASV 234
Query: 260 ALYLASDDAKYVSGHNLVVDGGFTSF 285
             +LASD A  ++G  + VD GFT +
Sbjct: 235 VQFLASDAASLMTGAIVNVDAGFTVW 260

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           ++   R ++  VA+ITG ASG+G ATA + +  GA  V+ D+ +  G+  AK+LG N  F
Sbjct: 1   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVF 60
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP----RSIVDLNLEVFDQVMRI 140
              DVT E DV  A+     K  ++D+  N AG+A  +     +      LE F +V+ +
Sbjct: 61  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 141 NVRG------VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           N+ G      +VAG           + G I+ TASV    G + Q  YS SK  I+G+  
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 195 SMAAELCEYGIRINCISPFAIPTPFV 220
            +A +L   GIR+  I+P    TP +
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLL 206

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           ++   R ++  VA+ITG ASG+G ATA + +  GA  V+ D+ +  G+  AK+LG N  F
Sbjct: 3   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVF 62
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP----RSIVDLNLEVFDQVMRI 140
              DVT E DV  A+     K  ++D+  N AG+A  +     +      LE F +V+ +
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 141 NVRG------VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           N+ G      +VAG           + G I+ TASV    G + Q  YS SK  I+G+  
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182
Query: 195 SMAAELCEYGIRINCISPFAIPTPFV 220
            +A +L   GIR+  I+P    TP +
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPLL 208

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           ++   R ++  VA+ITG ASG+G ATA + +  GA  V+ D+ +  G+  AK+LG N  F
Sbjct: 1   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVF 60
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP----RSIVDLNLEVFDQVMRI 140
              DVT E DV  A+     K  ++D+  N AG+A  +     +      LE F +V+ +
Sbjct: 61  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 141 NVRG------VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           N+ G      +VAG           + G I+ TASV    G + Q  YS SK  I+G+  
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 195 SMAAELCEYGIRINCISPFAIPTPFV 220
            +A +L   GIR+  I+P    TP +
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLL 206

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---GQQTAKELGPN 81
            S +   L+ K+AL+TGA+ GIG A A+ +   GA +V  DI  +L   G    K  G N
Sbjct: 25  FSLDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN 84
Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A    CDVT E  +   V    S+   +DI+ NNAG+  + P  ++++    F QV+ I+
Sbjct: 85  AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVP--MIEMTAAQFRQVIDID 142
Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +       K     MI +  G I+   S+   LG      Y+ +K  +  L K++A+E  
Sbjct: 143 LNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG 202
Query: 202 EYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRL-LELVYSTGVLEGTHCEPNDIAN 258
           E  I+ N I P  I TP    + E+ +     D SR   +             E  D+  
Sbjct: 203 EANIQCNGIGPGYIATPQTAPLRELQK-----DGSRHPFDQFIIAKTPAARWGEAEDLMG 257
Query: 259 AALYLASDDAKYVSGHNLVVDGGFTSF 285
            A++LASD + +V+GH L VDGG  ++
Sbjct: 258 PAVFLASDASNFVNGHILYVDGGILAY 284

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  + A++TG + GIG A A      GA V IAD+     Q     L      +  DVTK
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK 69
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + V  A+   I      D++  NAGV+  T R  VD+  E +D    +N RGV    + 
Sbjct: 70  RASVDAAMQKAIDALGGFDLLCANAGVS--TMRPAVDITDEEWDFNFDVNARGVFLANQI 127
Query: 152 STRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           + R  +   + G I+ TAS+   +G      YS SK A+ G  +++A E+    IR+NC+
Sbjct: 128 ACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCV 187
Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELV---YSTGVLEGTHCEPNDIANAALYLASDD 267
            P  + T   M+E   I+         E V   Y +    G   EP D+A+  ++LASD 
Sbjct: 188 CPGFVKT--AMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDA 245
Query: 268 AKYVSGHNLVVDGG 281
           A++++G  + V GG
Sbjct: 246 ARFMTGQGINVTGG 259

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L +KV ++TGA+ GIG+A A +F+  G+KV+   I H  G+            I CDVT 
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI-HDPGEAKYDH-------IECDVTN 57
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  ++D    ++  + ++ NNAG+  ++   I  +++  + +++ +N+ G     K 
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYASKF 115
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   MI  R   I+  +SV   +       Y  SK A+IGL KS+A +     +R N + 
Sbjct: 116 AIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVC 174
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH--CEPNDIANAALYLASDDAK 269
           P  I TP V  + +++  G D  R+ + +   G         +P ++A+A  +LAS +A 
Sbjct: 175 PATIDTPLV-RKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREAS 233
Query: 270 YVSGHNLVVDGGFT 283
           +++G  L VDGG +
Sbjct: 234 FITGTCLYVDGGLS 247

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L +KV ++TGA+ GIG+A A +F+  G+KV+   I H  G+            I CDVT 
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI-HDPGEAKYDH-------IECDVTN 64
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  ++D    ++  + ++ NNAG+  ++   I  +++  + +++ +N+ G     K 
Sbjct: 65  PDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYASKF 122
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   MI  R   I+  +SV   +       Y  SK A+IGL KS+A +     +R N + 
Sbjct: 123 AIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVC 181
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH--CEPNDIANAALYLASDDAK 269
           P  I TP V  + +++  G D  R+ + +   G         +P ++A+A  +LAS +A 
Sbjct: 182 PATIDTPLV-RKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREAS 240
Query: 270 YVSGHNLVVDGGFT 283
           +++G  L VDGG +
Sbjct: 241 FITGTCLYVDGGLS 254

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 13/253 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           + AL+TG++ G+G+A A      GA+++I         QT +E    G +A  +A DVT 
Sbjct: 27  RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS 86
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           ES++ +A      +   +DI+ NNAG+  + P  +++L    + +V+  N+       + 
Sbjct: 87  ESEIIEAFARLDEQGIDVDILVNNAGIQFRKP--MIELETADWQRVIDTNLTSAFMIGRE 144
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           + + MIPR  G I+   S+T  L       Y+V+K  I  L ++MAAE  +YGI+ N I 
Sbjct: 145 AAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 204
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P      +++ +M+Q  A +D       V +    +    +P ++   A++L++  + YV
Sbjct: 205 P-----GYMLTDMNQ--ALIDNPEFDAWVKARTPAK-RWGKPQELVGTAVFLSASASDYV 256
Query: 272 SGHNLVVDGGFTS 284
           +G  + VDGG  S
Sbjct: 257 NGQIIYVDGGMLS 269

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 30/285 (10%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI---------QHQLGQQT 74
           G  + + ++E KVA +TGAA G G++ A +    GA ++  DI            +   T
Sbjct: 1   GPGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPAST 60
Query: 75  AKELGPNATFIACD----VTKESDVSD------AVDFTISKHNQLDIMYNNAGVACKTPR 124
            ++L   A  +       VT E DV D      AVD  + +  +LDI+  NAG+      
Sbjct: 61  PEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-D 119
Query: 125 SIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYS 183
           ++   + E + +++ IN+ GV   +K     MI   R G I+ T+SV GL        Y 
Sbjct: 120 TLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYV 179
Query: 184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS-QIY------AGVDASRL 236
            +K  ++GL+++   EL ++ IR+N + P  + TP +  E + +++       G D    
Sbjct: 180 AAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP 239
Query: 237 LELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
           +  ++ T  L     EP DI+NA L+ ASD+A+Y++G  L +D G
Sbjct: 240 ICQMFHT--LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 19/253 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDVT 90
           V ++TGA+ GIGKA A      G KV++     A    ++ +Q     G   TF   DV+
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF-GGDVS 61
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           KE+DV   +   I     +D++ NNAG+   T   ++ +    +D+V+ +N+ GV    +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQ 119
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +T++M+ +R G I+  ASV GL+G + Q  Y+ +K+ +IG  K+ A E     I +N +
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179
Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA-SDDAK 269
            P      F+  +M+         ++L  +       G   +P ++A    +LA S  A 
Sbjct: 180 CP-----GFIASDMTAKLGEDMEKKILGTIPL-----GRTGQPENVAGLVEFLALSPAAS 229
Query: 270 YVSGHNLVVDGGF 282
           Y++G    +DGG 
Sbjct: 230 YITGQAFTIDGGI 242

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 136/254 (53%), Gaps = 13/254 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ KV ++T AA GIG+A A  F   GAKV+  DI     Q+  K  G     +  DVT
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL--DVT 60
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           K+  +    D   ++  +LD+++N AG       +++D   + +D  M +NVR +   IK
Sbjct: 61  KKKQI----DQFANEVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCEYGIRINC 209
                M+ ++SG I+  +SV   + G+     YS +K+A+IGL KS+AA+  + GIR NC
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           + P  + TP + E + Q     + +R   L        G      +IA   +YLASD++ 
Sbjct: 175 VCPGTVDTPSLQERI-QARGNPEEARNDFLKRQK---TGRFATAEEIAMLCVYLASDESA 230
Query: 270 YVSGHNLVVDGGFT 283
           YV+G+ +++DGG++
Sbjct: 231 YVTGNPVIIDGGWS 244

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 20/253 (7%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFIACDVT 90
           K AL+TGA+ GIG++ A +    G  V +    +  + +   +  K  G ++  I  +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV-FDQVMRINVRGVVAGI 149
              +V   +   +S+   LD++ NNAG+   T  +++    E  +D V+  N++GV   I
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGI---TRDNLLXRXKEQEWDDVIDTNLKGVFNCI 121
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           + +T   + +RSG I+  +SV G +G   Q  Y  +K+ +IGL KS A EL   GI +N 
Sbjct: 122 QKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNA 181
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDA-SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
           ++P      F++ + +      DA S  L+    T +      +  DIAN   +LASD A
Sbjct: 182 VAP-----GFIVSDXT------DALSDELKEQXLTQIPLARFGQDTDIANTVAFLASDKA 230
Query: 269 KYVSGHNLVVDGG 281
           KY++G  + V+GG
Sbjct: 231 KYITGQTIHVNGG 243

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           R ++  VA+ITG ASG+G +TA + +  GA  V+ D+ +  G+  AK+LG N  F   +V
Sbjct: 5   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANV 64
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN----LEVFDQVMRINVRG- 144
           T E +V  A+     K  ++D+  N AG+A          N    LE F +V+ +N+ G 
Sbjct: 65  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGT 124
Query: 145 -----VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
                +VAG+          + G I+ TASV    G + Q  YS SK  I+G+   +A +
Sbjct: 125 FNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 184
Query: 200 LCEYGIRINCISPFAIPTPFV 220
           L   GIR+  I+P    TP +
Sbjct: 185 LAPIGIRVVTIAPGLFATPLL 205

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           R ++  VA+ITG ASG+G +TA + +  GA  V+ D+ +  G+  AK+LG N  F   +V
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANV 65
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN----LEVFDQVMRINVRG- 144
           T E +V  A+     K  ++D+  N AG+A          N    LE F +V+ +N+ G 
Sbjct: 66  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGT 125
Query: 145 -----VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
                +VAG+          + G I+ TASV    G + Q  YS SK  I+G+   +A +
Sbjct: 126 FNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 200 LCEYGIRINCISPFAIPTPFV 220
           L   GIR+  I+P    TP +
Sbjct: 186 LAPIGIRVVTIAPGLFATPLL 206

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           R ++  VA+ITG ASG+G +TA + +  GA  V+ D+ +  G+  AK+LG N  F   +V
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANV 65
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN----LEVFDQVMRINVRG- 144
           T E +V  A+     K  ++D+  N AG+A          N    LE F +V+ +N+ G 
Sbjct: 66  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGT 125
Query: 145 -----VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
                +VAG+          + G I+ TASV    G + Q  YS SK  I+G+   +A +
Sbjct: 126 FNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 200 LCEYGIRINCISPFAIPTPFV 220
           L   GIR+  I+P    TP +
Sbjct: 186 LAPIGIRVVTIAPGLFATPLL 206

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           + +L  K AL+TGAA GIGKA AA+  ++GA V+++DI  +  +  A  +G  A  IA D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++    V        +    +DI+ NNA +         D++L+ + +++ +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWD--DVDLDHWRKIIDVNLTGTFIV 118
Query: 149 IKHSTRVM-IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +  T  M    ++G ++  AS T   G      Y  +K  +IG  +++A EL +Y I  
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I +  V           +A   +E++ +   ++G   +P  IA+   +LASDD
Sbjct: 179 NAVTPGLIESDGVKASPHN-----EAFGFVEMLQA---MKG-KGQPEHIADVVSFLASDD 229
Query: 268 AKYVSGHNLVVDGGF 282
           A++++G  L VD G 
Sbjct: 230 ARWITGQTLNVDAGM 244

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 18/260 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN-ATFIACDV 89
           +L+   A +TGA SGIG      F ++GA++++ D +     + A+ELG   A  I  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T +++   A          + I+ N+AG+A       ++ +   + QVM +NV G+    
Sbjct: 68  T-DAEAMTAAAAEAEAVAPVSILVNSAGIA--RLHDALETDDATWRQVMAVNVDGMFWAS 124
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAELCEYGIRI 207
           +   R M+ R +G I+   S++G +    Q   +Y  SK A+  L +++AAE    G+R+
Sbjct: 125 RAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRV 184
Query: 208 NCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           N ++P  + T     M E  +++        L++        G   EP++IA AAL+LAS
Sbjct: 185 NALAPGYVATEMTLKMRERPELF-----ETWLDMTPM-----GRCGEPSEIAAAALFLAS 234
Query: 266 DDAKYVSGHNLVVDGGFTSF 285
             A YV+G  L VDGG+T +
Sbjct: 235 PAASYVTGAILAVDGGYTVW 254

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 26/262 (9%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI 85
           S + E KV ++TG+  GIG+A A      GA VV+ADI  +  +  AK++   G  A  +
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISV 63
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-IVDLNLEVFDQVMRINVRG 144
           A DV+         D T+++   +D + NNA +        ++ ++ E + + M +N+ G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
            +   +   + M  R  G I+  +S       L  + Y ++K  I GL + ++ EL    
Sbjct: 124 ALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRN 180
Query: 205 IRINCISPFAIPTP-----FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           IRIN I+P  I T         E +  I  G+  SR+           GT   P+D+   
Sbjct: 181 IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRM-----------GT---PDDLVGM 226
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
            L+L SD+A +++G    VDGG
Sbjct: 227 CLFLLSDEASWITGQIFNVDGG 248

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 13/256 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKEL---GPNATFIACDV 89
           KVA++TG A GIG+  + K  ++G  + +AD+  Q  Q  +T K +      A F+  DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T +++   A+D    K    D++ NNAG+A   P  ++++  E   Q+  +NV  V  GI
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKP--LLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 150 KHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + ++R        G I+  AS+  + G      YS +K A+ GL ++ A EL   G  +N
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 209 CISPFAIPTPFVME---EMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
             +P  + T    +   E+S+I          E  YS+ +  G    P D+A    +LAS
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKE--YSSSIALGRPSVPEDVAGLVSFLAS 238
Query: 266 DDAKYVSGHNLVVDGG 281
           +++ YV+G  ++VDGG
Sbjct: 239 ENSNYVTGQVMLVDGG 254

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKELGPNATF 84
           S KL+ K  LITG  SGIG+A +  F   GA + IA +  +      +Q  ++ G     
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD-LNLEVFDQVMRINVR 143
           +  D++ E    D V  T+ +   L+I+ NN  VA + P+  ++ +  E  ++  RIN+ 
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNN--VAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 144 GVVAGIKHSTRVMIP--RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                  H T+  +   ++   I+ TAS+    G      YS +K AI+   +S++  L 
Sbjct: 160 SYF----HVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLV 215
Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           + GIR+N ++P  I TP        I +  D  ++ +  + + V      +P ++A A +
Sbjct: 216 QKGIRVNGVAPGPIWTPL-------IPSSFDEKKVSQ--FGSNVPXQRPGQPYELAPAYV 266
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           YLAS D+ YV+G  + V+GG
Sbjct: 267 YLASSDSSYVTGQXIHVNGG 286

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKELGPNATF 84
           S KL+ K  LITG  SGIG+A +  F   GA + IA +  +      +Q  ++ G     
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD-LNLEVFDQVMRINVR 143
           +  D++ E    D V  T+ +   L+I+ NN  VA + P+  ++ +  E  ++  RIN+ 
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNN--VAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 144 GVVAGIKHSTRVMIP--RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                  H T+  +   ++   I+ TAS+    G      YS +K AI+   +S++  L 
Sbjct: 160 SYF----HVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLV 215
Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           + GIR+N ++P  I TP        I +  D  ++ +  + + V      +P ++A A +
Sbjct: 216 QKGIRVNGVAPGPIWTPL-------IPSSFDEKKVSQ--FGSNVPMQRPGQPYELAPAYV 266
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           YLAS D+ YV+G  + V+GG
Sbjct: 267 YLASSDSSYVTGQMIHVNGG 286

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L  K  L+TGAASGIG+A    F   GA +V  D + +L  +    L   A  +  DV+
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 62
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V       + +  +L  + + AGVA        +L LE +++V+R+N+ G     +
Sbjct: 63  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSW--NLPLEAWEKVLRVNLTGSFLVAR 120
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +  V+     G ++ T SV G LG      Y+  K  ++GL +++A EL   G+R+N +
Sbjct: 121 KAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 177
Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
            P  I TP        + AG+      + V ++ +  G    P ++A AAL+L S+++ Y
Sbjct: 178 LPGLIQTP--------MTAGLPPWAWEQEVGASPL--GRAGRPEEVAQAALFLLSEESAY 227
Query: 271 VSGHNLVVDGG 281
           ++G  L VDGG
Sbjct: 228 ITGQALYVDGG 238

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 11/261 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFI 85
           L+ KVA++TG+ SGIG   A    + GA +V+      A+I+ ++    A + G    + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYD 60
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D++K   V   VD  + +  ++DI+ NNAG+  +    I D   E +D ++ +N+  V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G   +   M  +  G I+  AS  GL+    +  Y  +K  ++G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 206 RINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
             N I P  + TP V +++S +    GVD       + S          P  +   A++L
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           ASD A  ++G  + VDGG+T+
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           + +L  K AL+TGAA GIGKA AA+  ++GA V+++DI  +  +  A  +G  A  IA D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++    V        +    +DI+ NNA +         D++L+ + +++ +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWD--DVDLDHWRKIIDVNLTGTFIV 118
Query: 149 IKHST-RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +  T +     ++G ++  AS T   G      Y  +K  +IG  +++A EL +Y I  
Sbjct: 119 TRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT--HCEPNDIANAALYLAS 265
           N ++P  I +            GV AS   E       L+      +P  IA+   +LAS
Sbjct: 179 NAVTPGLIESD-----------GVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLAS 227
Query: 266 DDAKYVSGHNLVVDGG 281
           DDA++++G  L VD G
Sbjct: 228 DDARWITGQTLNVDAG 243

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  + AL+TGA  G+G+A A    + GA V +   + +  ++ A ELG        +++ 
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 67
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V         +   +DI+ NNAG+        V ++ E +D V+ +N+  V    + 
Sbjct: 68  REAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDWDAVLTVNLTSVFNLTRE 125
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            T  M+ RR+G I+   S+ G+ G   Q  Y  SK+ +IG  KS+A E+    + +NCI+
Sbjct: 126 LTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIA 185
Query: 212 PFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I +        ++   I   +   R+       GV         DIA A +YLASD+
Sbjct: 186 PGFIESAMTGKLNEKQKDAIMGNIPMKRM-------GV-------GADIAAAVVYLASDE 231
Query: 268 AKYVSGHNLVVDGGF 282
           A YV+G  L V+GG 
Sbjct: 232 AAYVTGQTLHVNGGM 246

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  + AL+TGA  G+G+A A    + GA V +   + +  ++ A ELG        +++ 
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 64
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V         +   +DI+ NNAG+        V ++ E +D V+ +N+  V    + 
Sbjct: 65  REAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDWDAVLTVNLTSVFNLTRE 122
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
            T  M+ RR+G I+   S+ G+ G   Q  Y  SK+ +IG  KS+A E+    + +NCI+
Sbjct: 123 LTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIA 182
Query: 212 PFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P  I +        ++   I   +   R+       GV         DIA A +YLASD+
Sbjct: 183 PGFIESAMTGKLNEKQKDAIMGNIPMKRM-------GV-------GADIAAAVVYLASDE 228
Query: 268 AKYVSGHNLVVDGGF 282
           A YV+G  L V+GG 
Sbjct: 229 AAYVTGQTLHVNGGM 243

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL  + AL+TGA  GIG+A A  F + GA V +   +    ++ A +LG +    + +++
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS 83
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +    +    +   +DI+ NNAG+        V +  + +D V+ +N+       +
Sbjct: 84  DRKSIKQLAEVAEREMEGIDILVNNAGIT--RDGLFVRMQDQDWDDVLAVNLTAASTLTR 141
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
                M+ RR G I+   S+ G++G   Q  Y  +K+ +IG  K++A E+    I +NCI
Sbjct: 142 ELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCI 201
Query: 211 SPFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +P  I +        ++   I A +   R+       G+ E       +IA A +YLASD
Sbjct: 202 APGFIKSAMTDKLNEKQKEAIMAMIPMKRM-------GIGE-------EIAFATVYLASD 247
Query: 267 DAKYVSGHNLVVDGGF 282
           +A Y++G  L ++GG 
Sbjct: 248 EAAYLTGQTLHINGGM 263

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 34/278 (12%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-----QHQLGQQTAKELGPNATFI 85
           ++  KVA I+GAA G G++ A +    GA ++  DI            T ++L   A  +
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 86  A-CD---VTKESDVSD------AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
              D   VT + DV D      AVD  + +  +LDI+  NAGV     R +  +   V+ 
Sbjct: 72  KDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDG-RKLHKIRDNVWQ 130
Query: 136 QVMRINVRGVV----AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG 191
            ++ IN+ GV     AG+ H   V+   R G I+ T+SV G         Y  +K  +IG
Sbjct: 131 DMIDINLTGVWHTVKAGVPH---VLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIG 187
Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--------QIYAGVDASRLLELVYST 243
           L+++ A EL  + IR+N + P  + T  VM + +        +     D + + +++++ 
Sbjct: 188 LMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTL 247
Query: 244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
            V      + +DI+NA L+LASD+++YV+G +L VD G
Sbjct: 248 PV---PWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 11/261 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFI 85
           L+ KVA++TG+ SGIG   A    + GA +V+      A+I+ ++    A + G    + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYD 60
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D++K   V   VD  + +  ++DI+ NNAG+  +    I D   E +D ++ +N+  V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G   +   M  +  G I+  AS  GL+    +  Y  +K  ++G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 206 RINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
             N I P  + +P V +++S +    GVD       + S          P  +   A++L
Sbjct: 179 TANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           ASD A  ++G  + VDGG+T+
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 17/268 (6%)
Query: 19  ERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ----T 74
           E  ++G  +  + L+++VA++TGA+ GIG+A A +    GA +VI     + G +     
Sbjct: 13  EAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAA 71
Query: 75  AKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
            K+ G        +V   + V   V+ T+ +   L+++ NNAG+     +  + +  + +
Sbjct: 72  FKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD--QLAMRMKDDEW 129
Query: 135 DQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           D V+  N++ V    +   R M+  R G I+   SV G  G   Q  Y+ +K+ + G+ +
Sbjct: 130 DAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTR 189
Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
           ++A E+   GI +NC++P      F+  +M++   G+   +  +    T +  G    P 
Sbjct: 190 ALAREIGSRGITVNCVAP-----GFIDTDMTK---GLPQEQ--QTALKTQIPLGRLGSPE 239
Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGF 282
           DIA+A  +LAS  A Y++G  L V+GG 
Sbjct: 240 DIAHAVAFLASPQAGYITGTTLHVNGGM 267

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 128/280 (45%), Gaps = 44/280 (15%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ-----QTAKELGPNATFIA 86
           L  KVA ITGAA G G+A A +  ++GA ++  D+  Q+        T +EL      + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 87  ----------CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQ 136
                      DV     +S A+   + +  +LDI+  NAG+A   P S  D   + +  
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA---PMSAGD---DGWHD 124
Query: 137 VMRINVRGVVAGIKHSTRVMIPR-----RSGCILCTASVTGLLG-GLAQHT---YSVSKS 187
           V+ +N+ GV     H+ +V IP        G I+  +S  GL G G A      Y  +K 
Sbjct: 125 VIDVNLTGVY----HTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKH 180
Query: 188 AIIGLVKSMAAELCEYGIRINCISPFAIPTP-----FVMEEMSQIYAGVDASRLLELVYS 242
            ++GL++  A  L    IR+N I P  + TP     F  E ++++ A  D    +     
Sbjct: 181 GVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP 240
Query: 243 TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
             VL      P D+ANA  +L SD A+Y++G  L VD GF
Sbjct: 241 VEVLA-----PEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 11/261 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFI 85
           L+ KVA++TG+ SGIG   A    + GA +V+      A+I+ ++    A + G    + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYD 60
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D++K   V   VD  + +  ++DI+ NNAG+  +    I D   E +D ++ +N+  V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G   +   M  +  G I+  AS  GL+    +  Y  +K  ++G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 206 RINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
             N I P  +  P V +++S +    GVD       + S          P  +   A++L
Sbjct: 179 TANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           ASD A  ++G  + VDGG+T+
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDV 89
           + ALITGA+ GIG+A A +   +G  + I   Q++   +   E       P    +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
            +    +  V         LD + NNAG+   T   +V +  E ++ V+  N+  V    
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDT--LLVRMKDEDWEAVLEANLSAVFRTT 119
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           + + ++M+  R G I+   SV G+LG   Q  Y  SK+ +IG  +++A E  + GI +N 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELV---YSTGVLEGTHCEPNDIANAALYLASD 266
           ++P      F+  EM++        RL + V   Y   +  G    P ++A A  +L S+
Sbjct: 180 VAP-----GFIETEMTE--------RLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSE 226
Query: 267 DAKYVSGHNLVVDGGFT 283
            A Y++G  L VDGG T
Sbjct: 227 KAGYITGQTLCVDGGLT 243

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 17/261 (6%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDV 89
           K A+ITG+ SGIG A A      GA +V+      D    +  + A            D 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADX 85
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           TK S+++D       +    DI+ NNAGV  +    I D  +E +D+++ +N+       
Sbjct: 86  TKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSF--- 140
Query: 150 KHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
            H+ R  IP    +  G I+  AS  GL+    +  Y  +K  I GL K++A E+ E G+
Sbjct: 141 -HTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGV 199
Query: 206 RINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +N I P  + TP V +++       G+   +++  V   G           +A+ ALYL
Sbjct: 200 TVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYL 259
Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           A DDA  ++G ++  DGG+T+
Sbjct: 260 AGDDAAQITGTHVSXDGGWTA 280

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 17/264 (6%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
            +  +KVA++TG +SGIG A     +  GAKVV   +  +     +            DV
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-------KIDV 62
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E +V +AV+ T  K+ ++DI+ NNAG+   +P  +     E++ +++ +NV G     
Sbjct: 63  TNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPT--EIWRRIIDVNVNGSYLMA 120
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           K++  VM+    G I+  ASV           Y  SK A++GL +S+A +     IR N 
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYLASDD 267
           + P  I TP V++  +++  G D + +   +   G     G    P ++A    +LASD 
Sbjct: 180 VCPGTIMTPMVIKA-AKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238
Query: 268 AKYVSGHNLVVDGGFTSFKNLKLP 291
           + +++G  L VDGG  S    KLP
Sbjct: 239 SSFITGACLTVDGGLLS----KLP 258

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 31/261 (11%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV---IADIQHQLGQQTAKELGPNATFIACD 88
           L EKVAL+TGA+ GIG   A    S GA VV    +    +  + + KE G  A  +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 89  VTKESDVSDAVDF--TISKHN-QLDIMYNNAGVACKTPRSIVDLNLE-VFDQVMRINVRG 144
           +   SD+    +F   I   N  +DI+ NNAG+   T  ++     E  +  V+  N+  
Sbjct: 63  I---SDIESIQNFFAEIKAENLAIDILVNNAGI---TRDNLXXRXSEDEWQSVINTNLSS 116
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           +    K   R    +R G I+   SV G  G   Q  Y  +K+ +IG  KS+A E+    
Sbjct: 117 IFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 205 IRINCISPFAIPT----PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           I +N ++P  I T        E+ S I              +T +  G   EP DIA A 
Sbjct: 177 ITVNVVAPGFIATDXTDKLTDEQKSFI--------------ATKIPSGQIGEPKDIAAAV 222
Query: 261 LYLASDDAKYVSGHNLVVDGG 281
            +LAS++AKY++G  L V+GG
Sbjct: 223 AFLASEEAKYITGQTLHVNGG 243

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 19/256 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKV-VIADIQHQLGQQTAK--ELGP-NATFIAC 87
           L  +  L+TG   GIG+  A  F   GA V V A    +L   TA+  ELG  N   +  
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD-LNLEVFDQVMRINVRGVV 146
           DV+     +DA    +     LD++  NAG+    P + +D +  E   +V+ +NV+G V
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGI---FPEARLDTMTPEQLSEVLDVNVKGTV 155
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGI 205
             ++     +     G ++ T+S+TG + G    + Y  SK+A +G +++ A EL   G+
Sbjct: 156 YTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            +N I P  I T  +++   +  +G+  S  + ++ S          P DI + A +LA+
Sbjct: 216 TVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGS----------PVDIGHLAAFLAT 265
Query: 266 DDAKYVSGHNLVVDGG 281
           D+A Y++G  +VVDGG
Sbjct: 266 DEAGYITGQAIVVDGG 281

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNAT-FIACDV 89
           KVAL+TGAA GIG+A A   +  GAKV + D   + G Q      ++  P  T FI CDV
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 67
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             +  + D     +    +LDI+ NNAGV           N + +++ ++IN+  V++G 
Sbjct: 68  ADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLVSVISGT 117
Query: 150 KHSTRVMIPR---RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS--MAAELCEYG 204
                 M  +     G I+  +S+ GL+    Q  Y  SK  I+G  +S  +AA L   G
Sbjct: 118 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 177
Query: 205 IRINCISPFAIPTPFV-----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           +R+N I P  + T  +      E M Q     D   + +++   G+L     +P  IAN 
Sbjct: 178 VRLNAICPGFVNTAILESIEKEENMGQYIEYKD--HIKDMIKYYGIL-----DPPLIANG 230
Query: 260 ALYLASDDA 268
            + L  DDA
Sbjct: 231 LITLIEDDA 239

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 36/276 (13%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--------PNA 82
           +L   +AL+TGA SGIG+A + +    GA V   D+     Q+T + LG        P  
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 83  TFIACDVTKESDVSDA---------VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV 133
              A     ++DVS+A         V    S+     ++ + AG+       ++ ++ + 
Sbjct: 64  NHAAF----QADVSEARAARCLLEQVQACFSRPP--SVVVSCAGI--TQDEFLLHMSEDD 115
Query: 134 FDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
           +D+V+ +N++G     + + + ++     G I+  +S+ G +G + Q  Y+ SK+ +IGL
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGL 175
Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            ++ A EL  +GIR N + P  I TP   +   ++   VD  ++ E++       G   +
Sbjct: 176 TQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV---VD--KITEMIPM-----GHLGD 225
Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL 288
           P D+A+   +LAS+D+ Y++G ++ V GG    +NL
Sbjct: 226 PEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL 261

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 36/257 (14%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L++KV LITGA +G+GK  A  F   GAKVV+ D +     +T  E+   G  A     D
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHD 377
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V K+S+    +   I K+  +DI+ NNAG+     RS   ++ + +D V ++++ G    
Sbjct: 378 VAKDSEA--IIKNVIDKYGTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + +    + ++ G I+   S +G+ G   Q  YS SK+ I+GL K+MA E  +  I++N
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 209 CISPF---AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            ++P    A+    + E+   +Y     + LL                       +YL +
Sbjct: 494 IVAPHAETAMTLSIMREQDKNLYHADQVAPLL-----------------------VYLGT 530
Query: 266 DDAKYVSGHNLVVDGGF 282
           DD   V+G    + GG+
Sbjct: 531 DDVP-VTGETFEIGGGW 546

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 24/247 (9%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           L+TG +SGIG A A +F   GA+VV       LG        P    I     +E D++D
Sbjct: 15  LVTGGSSGIGAAIAMQFAELGAEVV------ALGLDADGVHAPRHPRIR---REELDITD 65
Query: 98  A--VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
           +  +        +LD++ NNAG++    R   + +L  F++V+R+N+   +       R 
Sbjct: 66  SQRLQRLFEALPRLDVLVNNAGIS----RDREEYDLATFERVLRLNLSAAMLA-SQLARP 120
Query: 156 MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI 215
           ++ +R G IL  AS+    G   +  YS SK AI+ L +S+A E     IR+N I+P  I
Sbjct: 121 LLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWI 180
Query: 216 PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN 275
            TP      + + A V+A+R   ++  T +      E  ++A+AA +L    A +V+G  
Sbjct: 181 DTPL----GAGLKADVEATR--RIMQRTPL--ARWGEAPEVASAAAFLCGPGASFVTGAV 232
Query: 276 LVVDGGF 282
           L VDGG+
Sbjct: 233 LAVDGGY 239

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 14/255 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K AL+TG+A G+G A A    + GA+V++ DI+  L  ++   L   G +A  +A D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E  +  A     ++   +DI+ NNAG+  + P  +V+L LE + +V+  N+      
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP--MVELELENWQKVIDTNLTSAFLV 124
Query: 149 IKHSTRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            + + + MI R SG  I+   S+T          Y+ +K  I  L  SMAAE  ++ I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I P      +++ +M+   A ++  +    V S+   +     P ++   A++L+S  
Sbjct: 185 NAIGP-----GYILTDMNT--ALIEDKQFDSWVKSSTPSQ-RWGRPEELIGTAIFLSSKA 236
Query: 268 AKYVSGHNLVVDGGF 282
           + Y++G  + VDGG+
Sbjct: 237 SDYINGQIIYVDGGW 251

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 13/254 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L  + A++TGA SGIG+A A  +   GA V+       + ++ A E+          V 
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVA 86
Query: 91  KESDVSDAVDFT--ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
             +D+  A +    ++   ++D++ NNAG+  + P    +++L  + +V+ +N+      
Sbjct: 87  DLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAE--EVSLGRWREVLTVNLDAAWVL 144
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +     M+   SG I+  AS+    GG     Y+ SK A++GL +++A+E    G+ +N
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204
Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            ++P  +    V    + + A  D  R  E+     +  G    P D+   A++LASD A
Sbjct: 205 ALAPGYV----VTANTAALRA--DDERAAEITAR--IPAGRWATPEDMVGPAVFLASDAA 256
Query: 269 KYVSGHNLVVDGGF 282
            YV G  L VDGG+
Sbjct: 257 SYVHGQVLAVDGGW 270

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 17/264 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFI 85
           L+ K A++TG+ SGIG A A +    GA VVI       DI+ +     +K  G  A ++
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESK-FGVKAYYL 60
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D++      D +         LDI+ NNAG+    P  I +  ++ ++ ++ +N+  V
Sbjct: 61  NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAP--IEEFPVDKWNAIIALNLSAV 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G   +  +M  +  G I+  AS  GL+  + +  Y  +K  ++GL K  A E    GI
Sbjct: 119 FHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGI 178
Query: 206 RINCISPFAIPTPFVMEEMSQI--YAGVD---ASRLLELVYSTGVLEGTHCEPNDIANAA 260
             N I P  + TP V +++  I    G+D   A+R L L      L+     P  +  AA
Sbjct: 179 TCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAAREL-LAEKQPSLQ--FVTPEQLGGAA 235
Query: 261 LYLASDDAKYVSGHNLVVDGGFTS 284
           ++L+S  A  ++G  L +DGG+T+
Sbjct: 236 VFLSSAAADQMTGTTLSLDGGWTA 259

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L  +VAL+TG + G+G   A      G  VV+A    +   + A++L    G       C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+   +V   ++    K  +LD + N AG+  + P    +  L+ F QV+ +N+ G   
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAE--EFPLDEFRQVIEVNLFGTYY 136
Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCEYGIR 206
             + +  ++    +  I+   S+T     +     Y+ SK  +  L K++A E   YGIR
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I+P    T       S      D  +L  ++    +  G    P D+   A++LAS+
Sbjct: 197 VNVIAPGWYRTKMTEAVFS------DPEKLDYMLKRIPL--GRTGVPEDLKGVAVFLASE 248
Query: 267 DAKYVSGHNLVVDGGFTS 284
           +AKYV+G  + VDGG+T+
Sbjct: 249 EAKYVTGQIIFVDGGWTA 266

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 36/268 (13%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           ++ E   A+++G A G+G+AT  +  ++G  VVIAD+  + G+  A ELG  A F++ +V
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV 85
Query: 90  TKESDVSDAVDFTISKHNQLD------IMYNNAGVACK-TPRSIVDLNLEVFDQVMRINV 142
           T E    D+V   I   NQL       + +   GVA +   R     ++  F + + + +
Sbjct: 86  TSE----DSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141
Query: 143 RG---VVAGIKHSTRVMIPRRS---GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
            G   V   +  S     PR +   G ++ TAS+ G  G + Q  Y+ +K+ +IGL  + 
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201
Query: 197 AAELCEYGIRINCISPFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
           A +L   GIR+N I+P  + TP +     E +++  A +   + L          GT   
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRL----------GT--- 248
Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDG 280
           P++ A+AA +L ++   Y++G  + +DG
Sbjct: 249 PDEFADAAAFLLTNG--YINGEVMRLDG 274

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDV 89
           K  LITGA+ GIG   A    S G KV I     A++   L +   +E G  A  I  D 
Sbjct: 30  KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADAL-KNELEEKGYKAAVIKFDA 88
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             ESD  +A+   +     L  + NNAGV     +  + +  E F  V+  N+     G 
Sbjct: 89  ASESDFIEAIQTIVQSDGGLSYLVNNAGVV--RDKLAIKMKTEDFHHVIDNNLTSAFIGC 146
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           + + +VM   R G ++  AS+ G  G + Q  YS SK  +I + KS A E     IR N 
Sbjct: 147 REALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNS 206
Query: 210 ISPFAIPTPF---VMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           ++P  I T     + +E+   Y   +  +RL                  ++A A  +L S
Sbjct: 207 VTPGFIETDMNANLKDELKADYVKNIPLNRL--------------GSAKEVAEAVAFLLS 252
Query: 266 DDAKYVSGHNLVVDGGF 282
           D + Y++G  L V+GG 
Sbjct: 253 DHSSYITGETLKVNGGL 269

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 34/278 (12%)
Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------------QQT 74
           ++  L+ +VA ITGAA G G++ A +  + GA ++  DI   +               +T
Sbjct: 9   QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDET 68
Query: 75  AK---ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL 131
           A+   + G  A     DV  ++ + + V   + +  +LD++  NAGV       + +L  
Sbjct: 69  ARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWG--RVWELTD 126
Query: 132 EVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAII 190
           E +D V+ +N+ G    ++ +   MI     G I+  +S  GL        YS SK  + 
Sbjct: 127 EQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLT 186
Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYSTGVLEGT 249
            L  ++A EL EYGIR+N I P+++ TP +  E M +I+A     R    V+S       
Sbjct: 187 ALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFA-----RHPSFVHS---FPPM 238
Query: 250 HCEPN------DIANAALYLASDDAKYVSGHNLVVDGG 281
             +PN      ++A+   +LA D +  ++G  + VD G
Sbjct: 239 PVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATF-- 84
           +   K  +ITG+++GIG++ A  F   GA+V I     D   +  QQ  K   P      
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT+ S   D ++ T++K  ++DI+ NNAG       +  D  +E++ +  ++N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+   + +   +I  +   +  ++ V G         Y+ +K+A+    +  A +L ++G
Sbjct: 143 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 202
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG-VLEGTHC-EPNDIANAALY 262
           +R+N +SP A+ T F M  M       D  +L   + S    +   HC +P +IAN  ++
Sbjct: 203 VRVNSVSPGAVATGF-MGAMGLPETASD--KLYSFIGSRKECIPVGHCGKPEEIANIIVF 259
Query: 263 LASDD-AKYVSGHNLVVDGGFT 283
           LA  + + Y+ G ++V DGG T
Sbjct: 260 LADRNLSSYIIGQSIVADGGST 281

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVT 90
           KVA+ITG++SGIG A A  F   GA +V+     D  H+  +   ++ G     +A DV 
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA 67
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRSIVDLNLEVFDQVMRINV----RGV 145
               V   V+   S     DI+ NNAG    +T     D   + + +++ +      RG+
Sbjct: 68  TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGL 127
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V G++        R  G I+  AS+  +     +  Y+V+K+A++   K++A E+ +  I
Sbjct: 128 VPGMR-------ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 206 RINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           R+NCI+P  I TP  ++   ++    G D    L+ V            P ++AN  ++L
Sbjct: 181 RVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFL 240
Query: 264 ASDDAKYVSGHNLVVDGG 281
            S+ A Y  G    VDGG
Sbjct: 241 CSERATYSVGSAYFVDGG 258

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 22/260 (8%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVT 90
           KVA+ITG++SGIG A A  F   GA +V+     D  H+  +   ++ G     +A DV 
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA 67
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV-------R 143
               V   V+   S     DI+ NNAG       +I++   E +     ++V       R
Sbjct: 68  TPEGVDAVVESVRSSFGGADILVNNAGTGSN--ETIMEAADEKWQFYWELHVMAAVRLAR 125
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G+V G++        R  G I+  AS+  +     +  Y+V+K+A++   K++A E+ + 
Sbjct: 126 GLVPGMR-------ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKD 178
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            IR+NCI+P  I TP  ++   ++    G D    L+ V            P ++AN  +
Sbjct: 179 NIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV 238
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           +L S+ A Y  G    VDGG
Sbjct: 239 FLCSERATYSVGSAYFVDGG 258

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 31/257 (12%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
           L+TG + GIGKA     + N    VI  DIQ     +       N  FI  D+TK+ D++
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE-------NLKFIKADLTKQQDIT 60
Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG---VVAGIKHST 153
           + +D  I K+   D ++ NAG+  K   SI D+++E   +V+ +NV      + G++++ 
Sbjct: 61  NVLD--IIKNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIKGLENNL 116
Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
           +V        I+   S    +       Y++SK AI    KS+A +L +Y IR+N + P 
Sbjct: 117 KV-----GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPG 171
Query: 214 AIPTPFVMEEMSQIYA---GV---DASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            + T  +   + Q YA   G+   +A +  E  +    +     +P +IA   ++L SD 
Sbjct: 172 TVDTD-LYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI----AQPQEIAELVIFLLSDK 226
Query: 268 AKYVSGHNLVVDGGFTS 284
           +K+ +G  + +DGG+T+
Sbjct: 227 SKFXTGGLIPIDGGYTA 243

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 40/255 (15%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATF-IACDVTKESDV 95
           L+TG   GIG A A +  ++G KV +          T +  G P   F +  DVT     
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAV----------THRGSGAPKGLFGVEVDVTD---- 84
Query: 96  SDAVD--FTISKHNQ--LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           SDAVD  FT  + +Q  ++++ +NAG++      ++ +  E F++V+  N+ G     + 
Sbjct: 85  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGAFRVAQR 142
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           ++R M   + G ++  ASV+GL G   Q  Y+ SK+ +IG+ +S+A EL +  +  N ++
Sbjct: 143 ASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 202
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE----PNDIANAALYLASDD 267
           P  I T              D +R L+     G L+    +    P ++A    +LAS+D
Sbjct: 203 PGYIDT--------------DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED 248
Query: 268 AKYVSGHNLVVDGGF 282
           A Y+SG  + VDGG 
Sbjct: 249 ASYISGAVIPVDGGM 263

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 22/256 (8%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           E+ AL+TG + GIG+A A   ++ G +V IA    +   + A+ LG  A  +  D+ K+ 
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLG--AVPLPTDLEKD- 55
Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           D    V   +     L ++ + A V  + P   ++L+ E + +V+ +++       + + 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVNVRKP--ALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 154 RVMIPRRSGCILCTASVTGLLGG--LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             M     G +L   SVT    G  +    Y+ +K+A++GL +++A E    GIR+N + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173
Query: 212 PFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           P  + T F +   +  ++Y  + A           +  G    P +IA  A  L  D+A+
Sbjct: 174 PGYVETEFTLPLRQNPELYEPITAR----------IPMGRWARPEEIARVAAVLCGDEAE 223
Query: 270 YVSGHNLVVDGGFTSF 285
           Y++G  + VDGGF ++
Sbjct: 224 YLTGQAVAVDGGFLAY 239

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 40/255 (15%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATF-IACDVTKESDV 95
           L+TG   GIG A A +  ++G KV +          T +  G P   F + CDVT     
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAV----------THRGSGAPKGLFGVECDVTD---- 64
Query: 96  SDAVD--FTISKHNQ--LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           SDAVD  FT  + +Q  ++++ +NAG++      ++ +  E F++V+  N+ G     + 
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGAFRVAQR 122
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           ++R M   + G ++   SV+G  G   Q  Y+ SK+ +IG+ +S+A EL +  +  N ++
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 182
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE----PNDIANAALYLASDD 267
           P  I T              D +R L+     G L+    +    P ++A    +LAS+D
Sbjct: 183 PGYIDT--------------DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED 228
Query: 268 AKYVSGHNLVVDGGF 282
           A Y+SG  + VDGG 
Sbjct: 229 ASYISGAVIPVDGGM 243

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 16/261 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL+ +  LITG ASG+G+A   +F++ GAKV + D   +   +   + G N   I  DV 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVR 61
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLE----VFDQVMRINVRGVV 146
              D   A    +++  ++D +  NAG+      ++VDL  E     FD+V  INV+G +
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGI-WDYSTALVDLPEESLDAAFDEVFHINVKGYI 120
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             +K     ++  R G ++ T S  G         Y+ +K AI+GLV+ +A EL  Y +R
Sbjct: 121 HAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VR 178
Query: 207 INCISPFAIPT----PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +N +    I +    P  +   S+  + V  + +L+ V   G +     E  +   A ++
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMP----EVEEYTGAYVF 234
Query: 263 LAS-DDAKYVSGHNLVVDGGF 282
            A+  DA   +G  L  DGG 
Sbjct: 235 FATRGDAAPATGALLNYDGGL 255

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 40/255 (15%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATF-IACDVTKESDV 95
           L+TG   GIG A A +  ++G KV +          T +  G P   F +  DVT     
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAV----------THRGSGAPKGLFGVEVDVTD---- 64
Query: 96  SDAVD--FTISKHNQ--LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           SDAVD  FT  + +Q  ++++ +NAG++      ++ +  E F++V+  N+ G     + 
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGAFRVAQR 122
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           ++R M   + G ++   SV+GL G   Q  Y+ SK+ +IG+ +S+A EL +  +  N ++
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 182
Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE----PNDIANAALYLASDD 267
           P  I T              D +R L+     G L+    +    P ++A    +LAS+D
Sbjct: 183 PGYIDT--------------DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED 228
Query: 268 AKYVSGHNLVVDGGF 282
           A Y+SG  + VDGG 
Sbjct: 229 ASYISGAVIPVDGGM 243

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 203 NAVCPGFVETPMAASVREHFSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 260
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 261 GPGAAAVTAQALNVCGGLGNY 281

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 203 NAVCPGWVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 260
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 261 GPGAAAVTAQALNVCGGLGNY 281

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 138
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 199 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 256
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 257 GPGAAAVTAQALNVCGGLGNY 277

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 260
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 261 GPGAAAVTAQALNVCGGLGNY 281

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 64
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 122
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 123 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 182
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 183 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 240
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 241 GPGAAAVTAQALNVCGGLGNY 261

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K   +TGA  GIG ATA  F+  GAKV   D      Q   +E  P AT +  DV   + 
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFD------QAFTQEQYPFATEV-MDVADAAQ 60
Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V+      +++  +LD + N AG+          L+ E + Q   +NV G     + +  
Sbjct: 61  VAQVCQRLLAETERLDALVNAAGILRMGATD--QLSKEDWQQTFAVNVGGAFNLFQQTMN 118
Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
               +R G I+  AS       +    Y  SK+A+  L  S+  EL   G+R N +SP +
Sbjct: 119 QFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGS 178
Query: 215 IPTPFVMEEMSQIYAGVDASRLLEL--VYSTGVLEGTHCEPNDIANAALYLASDDAKYVS 272
             T   M+    +    +  R+      +  G+  G    P +IAN  L+LASD A +++
Sbjct: 179 TDTD--MQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHIT 236
Query: 273 GHNLVVDGGFT 283
             ++VVDGG T
Sbjct: 237 LQDIVVDGGST 247

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S ++ + VA++TG ASG+G AT  + +  GA+VV+ DI+   G+    +LG  A F A D
Sbjct: 4   SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAAD 60
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGV-------------ACKTPRSIVDLNLEVFD 135
           VT E+ V+ A+D        L I+ N AG              +    R IVD+NL    
Sbjct: 61  VTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 136 QVMRINVRGVVAGIKHSTRVMIP--RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
            V+R+    +       T  + P     G I+ TASV    G + Q  YS SK  ++G+ 
Sbjct: 120 NVLRLAAERIA-----KTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMT 174
Query: 194 KSMAAELCEYGIRINCISPFAIPTPFV 220
             +A +L  + IR+  I+P    TP +
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLL 201

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 260
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 261 GPGAAAVTAQALNVCGGLGNY 281

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG--ATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 260
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 261 GPGAAAVTAQALNVCGGLGNY 281

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDV 89
           + +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG--ATAELADELWLDVVETNLTGVFRVT 138
Query: 150 KHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
           K   +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 208 NCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           N + P  + TP    V E  S I+  V      + + +  V  G + +P+++A    YL 
Sbjct: 199 NAVCPGFVETPMAASVREHYSDIWE-VSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLI 256
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
              A  V+   L V GG  ++
Sbjct: 257 GPGAAAVTAQALNVCGGLGNY 277

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL  +VALITG ASG+G+A   +F++ GA+V + D   +  ++     G NA  +  DV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR 61
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVA------CKTPRSIVDLNLEVFDQVMRINVRG 144
              D   A +  ++   ++D +  NAG+          P   +D     FD +  +NV+G
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKID---AAFDDIFHVNVKG 118
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
            +  +K     ++  R G ++ T S  G         Y+ +K A++GLV+ MA EL  + 
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH- 176
Query: 205 IRINCISPFAIPT 217
           +R+N ++P  + T
Sbjct: 177 VRVNGVAPGGMNT 189

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
            + + A++TG ASGIG ATA +F   GA++V++D+     +Q    L   G +A  + CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V    ++    D        +D++++NAG+    P  +  +N + +  V+ I++ G +  
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP--LAQMNHDDWRWVIDIDLWGSI-- 144
Query: 149 IKHSTRVMIPR-----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
             H+    +PR       G I  TAS  GL+      TY V+K  ++GL +++A E+   
Sbjct: 145 --HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202
Query: 204 GIRINCISPFAIPTPFV 220
           GI ++ + P  + T  V
Sbjct: 203 GIGVSVLCPMVVETKLV 219

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 23/256 (8%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT----AKELGPNATFIAC 87
           LE + AL+TGA +G+G+A A    + GA+VV A    +   +T    AK+ G NA+ +  
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCA--ARRAPDETLDIIAKD-GGNASALLI 63
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D        D+  FT +     DI+ NNAG+  +     V+ +   +D+VM +N++ +  
Sbjct: 64  DFADPLAAKDS--FTDAG---FDILVNNAGIIRRADS--VEFSELDWDEVMDVNLKALFF 116
Query: 148 GIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             +   + ++ + RSG ++  AS+    GG+   +Y+ +K  + GL K +A E    GI 
Sbjct: 117 TTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGIN 176
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I+P  I T         + A  DA+R   ++         H E  DIA AA++L+S 
Sbjct: 177 VNAIAPGYIET----NNTEALRA--DAARNKAILERIPAGRWGHSE--DIAGAAVFLSSA 228
Query: 267 DAKYVSGHNLVVDGGF 282
            A YV G  L VDGG+
Sbjct: 229 AADYVHGAILNVDGGW 244

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 15/252 (5%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIACDV 89
           ++VA +TG   G+G A + +    G  V ++  +      T     ++ G +    A DV
Sbjct: 25  KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV 84
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
                     +  ++   ++D++ NNAG+      + + +    +D VMR ++  +    
Sbjct: 85  ADFESCERCAEKVLADFGKVDVLINNAGITRDA--TFMKMTKGDWDAVMRTDLDAMFNVT 142
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           K     M+ RR G I+   SV G  G   Q  Y+ +K+ I G  K++A E  + GI +N 
Sbjct: 143 KQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNT 202
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           +SP  + T  V E + Q         +LE      +  G    P+++A    +L SDDA 
Sbjct: 203 VSPGYLATAMV-EAVPQ--------DVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAG 253
Query: 270 YVSGHNLVVDGG 281
           +V+G +L ++GG
Sbjct: 254 FVTGADLAINGG 265

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 138/284 (48%), Gaps = 28/284 (9%)
Query: 14  IALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ 73
           +A  A+  S G S  S+ L  KVAL TGA  GIG+  A +    GA VV+         +
Sbjct: 1   MAPSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE 60
Query: 74  TA----KELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAG--VACKTPRSIV 127
                 K+LG     I  D++K S+V    D  +S    LD + +N+G  V C      +
Sbjct: 61  EVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE----L 116
Query: 128 DLNLEVFDQVMRINVRG----VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-Y 182
           ++  E+FD+V  +N RG       G+KH       RR G I+ T+S+  ++ G+  H  Y
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHC------RRGGRIILTSSIAAVMTGIPNHALY 170
Query: 183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-----GVDASRLL 237
           + SK+A+ G  ++ A +    G+ +NCI+P  + T  + +E S  YA     G+   ++ 
Sbjct: 171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD-MFDENSWHYAPGGYKGMPQEKID 229
Query: 238 ELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
           E + +   L+     P DI  A   L  +++++++G  + + GG
Sbjct: 230 EGLANMNPLKRIG-YPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 24/267 (8%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +   K  +ITG+++GIG+ TA  F   GA V I     +  ++T + +            
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSI----VDLNLEVFDQVMRI 140
           +  DVT E      ++ T+ +  ++D++ NNAG A   P +      D  ++++ + +++
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI--PDAFGTTGTDQGIDIYHKTLKL 120
Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N++ V+   K     ++  +   +  ++ V G         Y+++K+A+    +S A +L
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180
Query: 201 CEYGIRINCISPFAIPTPF-----VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
            ++GIR+N +SP  + T F     + ++ SQ +    AS      +   +  G   +P  
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS------HKECIPIGAAGKPEH 234
Query: 256 IANAALYLASDD-AKYVSGHNLVVDGG 281
           IAN  L+LA  + + Y+ G ++V DGG
Sbjct: 235 IANIILFLADRNLSFYILGQSIVADGG 261

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIACDVTKES 93
           L+TGA+ GIG+A A +  ++G  + +   +   G Q+T   +   G N   ++ DV    
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANRE 89
Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
              + ++  I++H     + +NAG+A     +   L+ + +D V+  N+      I+   
Sbjct: 90  QCREVLEHEIAQHGAWYGVVSNAGIARDA--AFPALSNDDWDAVIHTNLDSFYNVIQPCI 147
Query: 154 RVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
             MI  R+ G I+  +SV+G++G   Q  YS +K+ IIG  K++A EL +  I +NCI+P
Sbjct: 148 MPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAP 207
Query: 213 FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS 272
             I T  +  E S +   +    +  +            +  ++A  A YL SD A YV+
Sbjct: 208 GLIDTGMIEMEESALKEAMSMIPMKRM-----------GQAEEVAGLASYLMSDIAGYVT 256
Query: 273 GHNLVVDGGF 282
              + ++GG 
Sbjct: 257 RQVISINGGM 266

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           ++ +V ++TGA  GIG+A A  F + GA+VV+ DI   L    A   G  A  +  ++T 
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASG-GSAAQSVVDEITA 83
Query: 92  E-----SDVSDAVDF---------TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
                 +D S+  D+          +     LD++ NNAG+     R I + + E FD V
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAV 141
Query: 138 MRINVRGVVAGIKHSTRVMIPRR------SGCILCTASVTGLLGGLAQHTYSVSKSAIIG 191
           + ++++G  A ++H+               G I+ T+S  GL G + Q  YS +K+ I  
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIAT 201
Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY----STGVLE 247
           L    AAE+  YG+ +N I+P A                   +R+ E V+    +T   +
Sbjct: 202 LTLVGAAEMGRYGVTVNAIAPSA------------------RTRMTETVFAEMMATQDQD 243
Query: 248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                P +++   ++L S +A+ V+G    V+GG
Sbjct: 244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 42/280 (15%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------ 78
           L  +S  LE KVAL+TGA  GIG+  A +    G KV+   + +    ++A+E+      
Sbjct: 20  LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVI---VNYANSTESAEEVVAAIKK 76
Query: 79  -GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
            G +A  +  +V    D+    +  +    +LDI+ +N+GV   +   + D+  E FD+V
Sbjct: 77  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRV 134
Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSM 196
             IN RG     + + + +     G ++   S+TG    + +H  YS SK AI    + M
Sbjct: 135 FTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 197 AAELCEYGIRINCISPFAIPTPFVM---------------EEMSQIYAGVDASRLLELVY 241
           A ++ +  I +N ++P  I T                   EE+ + YA V  S L  +  
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE-YAAVQWSPLRRVGL 251
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                      P DIA    +LAS+D  +V+G  + +DGG
Sbjct: 252 -----------PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 42/280 (15%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------ 78
           L  +S  LE KVAL+TGA  GIG+  A +    G KV+   + +    ++A+E+      
Sbjct: 20  LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVI---VNYANSTESAEEVVAAIKK 76
Query: 79  -GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
            G +A  +  +V    D+    +  +    +LDI+ +N+GV   +   + D+  E FD+V
Sbjct: 77  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRV 134
Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSM 196
             IN RG     + + + +     G ++   S+TG    + +H  YS SK AI    + M
Sbjct: 135 FTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 197 AAELCEYGIRINCISPFAIPTPFVM---------------EEMSQIYAGVDASRLLELVY 241
           A ++ +  I +N ++P  I T                   EE+ + YA V  S L  +  
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE-YAAVQWSPLRRVGL 251
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                      P DIA    +LAS+D  +V+G  + +DGG
Sbjct: 252 -----------PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 45/262 (17%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D++       +TA ++G  A ++  
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL-- 266
Query: 88  DVTKESDVSDAVDFTISKH------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           DVT +    DAVD  IS+H       + DI+ NNAG+     + + +++   +D V+ +N
Sbjct: 267 DVTAD----DAVD-KISEHLRDHHGGKADILVNNAGITRD--KLLANMDDARWDAVLAVN 319
Query: 142 VRG---VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           +     +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IG+ +++A 
Sbjct: 320 LLAPLRLTEGLVGNGSIG---EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 376
Query: 199 ELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            L   GI IN ++P  I T      P    E+ +        RL  L      L+G   +
Sbjct: 377 GLAAKGITINAVAPGFIETQMTAAIPLATREVGR--------RLNSL------LQG--GQ 420
Query: 253 PNDIANAALYLASDDAKYVSGH 274
           P D+A A  Y AS  +  V+G+
Sbjct: 421 PVDVAEAIAYFASPASNAVTGN 442

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 45/262 (17%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D++       +TA ++G  A ++  
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL-- 274
Query: 88  DVTKESDVSDAVDFTISKH------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           DVT +    DAVD  IS+H       + DI+ NNAG+     + + +++   +D V+ +N
Sbjct: 275 DVTAD----DAVD-KISEHLRDHHGGKADILVNNAGITRD--KLLANMDDARWDAVLAVN 327
Query: 142 VRG---VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           +     +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IG+ +++A 
Sbjct: 328 LLAPLRLTEGLVGNGSIG---EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 384
Query: 199 ELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            L   GI IN ++P  I T      P    E+ +        RL  L      L+G   +
Sbjct: 385 GLAAKGITINAVAPGFIETQMTAAIPLATREVGR--------RLNSL------LQG--GQ 428
Query: 253 PNDIANAALYLASDDAKYVSGH 274
           P D+A A  Y AS  +  V+G+
Sbjct: 429 PVDVAEAIAYFASPASNAVTGN 450

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 45/262 (17%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D++       +TA ++G  A ++  
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL-- 287
Query: 88  DVTKESDVSDAVDFTISKH------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           DVT +    DAVD  IS+H       + DI+ NNAG+     + + +++   +D V+ +N
Sbjct: 288 DVTAD----DAVD-KISEHLRDHHGGKADILVNNAGITRD--KLLANMDDARWDAVLAVN 340
Query: 142 VRG---VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           +     +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IG+ +++A 
Sbjct: 341 LLAPLRLTEGLVGNGSIG---EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 397
Query: 199 ELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            L   GI IN ++P  I T      P    E+ +        RL  L      L+G   +
Sbjct: 398 GLAAKGITINAVAPGFIETQMTAAIPLATREVGR--------RLNSL------LQG--GQ 441
Query: 253 PNDIANAALYLASDDAKYVSGH 274
           P D+A A  Y AS  +  V+G+
Sbjct: 442 PVDVAEAIAYFASPASNAVTGN 463

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA--DI------QHQLGQQTAKELGPNA 82
           +L+ K ALITGA  GIG   A  F + GA++V++  D+      +  LG+Q     G + 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ----FGTDV 72
Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
             +A D+ +    ++           LD++ NNAG++   P+ +VD + ++FD  + +N+
Sbjct: 73  HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS--HPQPVVDTDPQLFDATIAVNL 130
Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELC 201
           R          + M+    G  + T +    L  L  H  Y  SK+ ++   K +A EL 
Sbjct: 131 RAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190
Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            +GIR N + P       V+ EM Q   G D ++   ++    +  G    P+++++A +
Sbjct: 191 PHGIRANSVCPT-----VVLTEMGQRVWG-DEAKSAPMIAR--IPLGRFAVPHEVSDAVV 242
Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           +LASD A  ++G ++ VDGG+T
Sbjct: 243 WLASDAASMINGVDIPVDGGYT 264

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 45/262 (17%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D++       +TA ++G  A ++  
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL-- 250
Query: 88  DVTKESDVSDAVDFTISKH------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           DVT +    DAVD  IS+H       + DI+ NNAG+     + + +++   +D V+ +N
Sbjct: 251 DVTAD----DAVD-KISEHLRDHHGGKADILVNNAGITRD--KLLANMDDARWDAVLAVN 303
Query: 142 VRG---VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           +     +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IG+ +++A 
Sbjct: 304 LLAPLRLTEGLVGNGSIG---EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 360
Query: 199 ELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            L   GI IN ++P  I T      P    E+ +        RL  L      L+G   +
Sbjct: 361 GLAAKGITINAVAPGFIETQMTAAIPLATREVGR--------RLNSL------LQG--GQ 404
Query: 253 PNDIANAALYLASDDAKYVSGH 274
           P D+A A  Y AS  +  V+G+
Sbjct: 405 PVDVAEAIAYFASPASNAVTGN 426

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 134/260 (51%), Gaps = 29/260 (11%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--QQTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D+       ++ A ++G   T +  
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG--GTALTL 266
Query: 88  DVTKESDVSDAVDFTISKHN--QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV--- 142
           DVT + D  D +   +++H+  ++DI+ NNAG+     + + +++ + +D V+ +N+   
Sbjct: 267 DVTAD-DAVDKITAHVTEHHGGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAP 323
Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           + +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IGL +++A  L +
Sbjct: 324 QRLTEGLVGNGTIG---EGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLAD 380
Query: 203 YGIRINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            GI IN ++P      F+  +M++    A  +  R L  ++  G       +P D+A   
Sbjct: 381 KGITINAVAPG-----FIETKMTEAIPLATREVGRRLNSLFQGG-------QPVDVAELI 428
Query: 261 LYLASDDAKYVSGHNLVVDG 280
            Y AS  +  V+G+ + V G
Sbjct: 429 AYFASPASNAVTGNTIRVCG 448

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 31/262 (11%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA-----DIQ------HQLGQQTAKELGP 80
           L+ +  ++TG   GIG+  A  F   GA V +A     DI        QLG  + K +G 
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIG- 64
Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
               +  DV+  +         + +   +D++  NAGV    P  +  +  E  + +  +
Sbjct: 65  ----VQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAP--LATMTPEQLNGIFAV 118
Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAE 199
           NV G    ++     +I   SG ++ T+S+TG + G    + Y  +K+A +G +++ A E
Sbjct: 119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIE 178
Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L  + I +N I P  I T  ++E   +  A +  S          +  G    P DI + 
Sbjct: 179 LAPHKITVNAIMPGNIMTEGLLENGEEYIASMARS----------IPAGALGTPEDIGHL 228
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
           A +LA+ +A Y++G  + VDGG
Sbjct: 229 AAFLATKEAGYITGQAIAVDGG 250

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 45/262 (17%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ--QTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D++       +TA ++G  A ++  
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL-- 258
Query: 88  DVTKESDVSDAVDFTISKH------NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           DVT +    DAVD  IS+H       + DI+ NNAG+     + + +++   +D V+ +N
Sbjct: 259 DVTAD----DAVD-KISEHLRDHHGGKADILVNNAGITRD--KLLANMDDARWDAVLAVN 311
Query: 142 VRG---VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           +     +  G+  +  +      G ++  +S+ G+ G   Q  Y+ +K+ +IG+ +++A 
Sbjct: 312 LLAPLRLTEGLVGNGSIG---EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 368
Query: 199 ELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
            L   GI IN ++P  I T      P    E+ +        RL  L      L+G   +
Sbjct: 369 GLAAKGITINAVAPGFIETQMTAAIPLATREVGR--------RLNSL------LQG--GQ 412
Query: 253 PNDIANAALYLASDDAKYVSGH 274
           P D+A A  Y AS  +  V+G+
Sbjct: 413 PVDVAEAIAYFASPASNAVTGN 434

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 20/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIAC 87
           L  K A +TG + GIG A A +    GA V +  +   +  Q    E+   G  A  I  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D      +  A+  T+     LDI+ N+AG+    P  + +  +  FD+V  +N R    
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDEVXAVNFRAPFV 146
Query: 148 GIKHSTRVMIPRRSGCILCTAS-VTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            I+ ++R +     G I+   S +  L+       YS SK+A+ GL K +A +L   GI 
Sbjct: 147 AIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGIT 204
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N + P +  T     +        +A R         +  G++ EP DIA    +LA  
Sbjct: 205 VNIVHPGSTDTDXNPADGDH----AEAQRER-------IATGSYGEPQDIAGLVAWLAGP 253
Query: 267 DAKYVSGHNLVVDGG 281
             K+V+G +L +DGG
Sbjct: 254 QGKFVTGASLTIDGG 268

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKELGPNATFIACD 88
           L+ KVA +TG++ GIG A A  +   GA V I    H   +  +   K  G ++    C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRSIVDLNLEVFDQVMRINVRGVVA 147
           ++    V + +         +D+   NAGV   + P   VD N + +++++ +++ GV  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVD-NYDSWNKIISVDLNGVYY 150
Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLA--QHTYSVSKSAIIGLVKSMAAELCEYGI 205
              +  ++      G ++ T+S++G +  +   Q  Y+ +K+A   L KS+A E   +  
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA- 209
Query: 206 RINCISPFAIP---TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           R+N ISP  I    T F  ++M   +      +L  L        G      ++    LY
Sbjct: 210 RVNTISPGYIDTDITDFASKDMKAKWW-----QLTPL--------GREGLTQELVGGYLY 256
Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LAS+ + + +G ++V+DGG+T
Sbjct: 257 LASNASTFTTGSDVVIDGGYT 277

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATF 84
           +L+ KVAL+TG+  GIG A A      GAKVV+       D +  + +   K LG +A  
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE--IKALGSDAIA 72
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I  D+ +  ++    D  ++    LDI  +N+GV       + D+  E FD+V  +N RG
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG--HLKDVTEEEFDRVFSLNTRG 130
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEY 203
                + + R +     G I+ T+S T     + +H+ YS SK A+   V+  + +  + 
Sbjct: 131 QFFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 204 GIRINCISPFAIPTPFVMEEMSQIY----AGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
            I +N ++P    T  +  E+S  Y        A +  ++      L   +  P D+AN 
Sbjct: 189 KITVNAVAPGGTVTD-MFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH-RNGWPQDVANV 246
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
             +L S + ++V+G  L +DGG
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 35/245 (14%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           LITGA+ GIG+ATA    + G +V +     +  Q  A EL   A  +  DV +E D + 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-EGALPLPGDVREEGDWAR 67
Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI 157
           AV        +L  + NNAGV    P  + +L LE +  V+  N+ G   GI+H+   ++
Sbjct: 68  AVAAMEEAFGELSALVNNAGVGVMKP--VHELTLEEWRLVLDTNLTGAFLGIRHAVPALL 125
Query: 158 PRRSGCILCTASVTG---LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            R  G I+   S+ G     GG A   Y+ SK  ++GL  +   +L E  +R+  + P +
Sbjct: 126 RRGGGTIVNVGSLAGKNPFKGGAA---YNASKFGLLGLAGAAMLDLREANVRVVNVLPGS 182
Query: 215 IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGH 274
           + T F      Q +                       +P D+A A L+     A  + GH
Sbjct: 183 VDTGFAGNTPGQAW---------------------KLKPEDVAQAVLF-----ALEMPGH 216
Query: 275 NLVVD 279
            +V +
Sbjct: 217 AMVSE 221

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 28/265 (10%)
Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GPNATF 84
           L+ KV ++TGA+   G+G   A      GA V I       G ++  KEL    G  A  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
             C V         V   ++   Q+D    NAG    +   I+D ++E ++ V+++++ G
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDLNG 135
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAELCE 202
                K        R +G ++ TAS++G +    Q   +Y+V+K+  I + +S+A E  +
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRD 195
Query: 203 YGIRINCISPFAIPT---PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           +  R+N ISP  I T    FV +E  Q++  +             +  G      ++  A
Sbjct: 196 FA-RVNSISPGYIDTGLSDFVPKETQQLWHSM-------------IPMGRDGLAKELKGA 241
Query: 260 ALYLASDDAKYVSGHNLVVDGGFTS 284
            +Y ASD + Y +G +L++DGG+T+
Sbjct: 242 YVYFASDASTYTTGADLLIDGGYTT 266

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 15/253 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACD 88
           L + VA++TGAA+GIG+A A  F   GA VV+ D++ +  +  A   ++ G  A  + C+
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E      +   + +  ++ ++ NNAG     P    D+ +  F+   ++N+  +   
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP---FDMPMSDFEWAFKLNLFSLFRL 126
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + +   M     G IL  +S+ G    +   +Y  SK+A+  L +++A ++   GIR+N
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186
Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I+P AI T    + ++ +      +  +E         G   E  DIANAAL+L S  A
Sbjct: 187 AIAPGAIKT----DALATVL-----TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAA 237
Query: 269 KYVSGHNLVVDGG 281
            ++SG  L V GG
Sbjct: 238 AWISGQVLTVSGG 250

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATF 84
           +L+ KVAL+TG+  GIG A A      GAKVV+       D +  + +   K LG +A  
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE--IKALGSDAIA 72
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I  D+ +  ++    D  ++    LDI  +N+GV       + D+  E FD+V  +N RG
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG--HLKDVTEEEFDRVFSLNTRG 130
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEY 203
                + + R +     G I+ T+S T     + +H+ +S SK A+   V+  + +  + 
Sbjct: 131 QFFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDK 188
Query: 204 GIRINCISPFAIPTPFVMEEMSQIY----AGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
            I +N ++P    T  +  E+S  Y        A +  ++      L   +  P D+AN 
Sbjct: 189 KITVNAVAPGGTVTD-MFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH-RNGWPQDVANV 246
Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
             +L S + ++V+G  L +DGG
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 22/262 (8%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L+ K AL+TG+ SGIG   A      GA +V+           A  L   A      V  
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG-----DPAPALAEIARHGVKAVHH 56
Query: 92  ESDVSDAVD----FTISKH--NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            +D+SD       F +++     +DI+ NNAG+    P  +    LE +D+++ +N+  V
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLSAV 114
Query: 146 VAGIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
                H TR+ +P    R  G I+  ASV GL+G   +  Y  +K  ++GL K +  E  
Sbjct: 115 F----HGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA 170
Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
              +  N I P  + TP V +++    A G D  +    + +          P  +    
Sbjct: 171 TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230
Query: 261 LYLASDDAKYVSGHNLVVDGGF 282
           L+L S+    V G    VDGG+
Sbjct: 231 LFLCSEAGSQVRGAAWNVDGGW 252

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           ++TG   GIGK     F+  G KV   DI  +     AKE  PN  +   DV     +  
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDVADPLTLKK 64
Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIV-DLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
            V++ + K  ++D++ NN   AC+  + I+  L  E FD ++ + ++     +    R  
Sbjct: 65  FVEYAMEKLQRIDVLVNN---ACRGSKGILSSLLYEEFDYILSVGLKAPYE-LSRLCRDE 120
Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
           + +  G I+  AS            Y+ +K  I+ L  ++A  L    + +NCI+P  I 
Sbjct: 121 LIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWIN 179
Query: 217 TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNL 276
                E   +  A + A ++           GT   P DI+N  L+L   D  +++G  +
Sbjct: 180 VTEQQEFTQEDCAAIPAGKV-----------GT---PKDISNMVLFLCQQD--FITGETI 223
Query: 277 VVDGGFT 283
           +VDGG +
Sbjct: 224 IVDGGMS 230

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 28/276 (10%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIAD-------IQHQLGQQTAKELGPNATF 84
            E K ALITG A G+G++ A      GA + I D       + + L   TA +L      
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLA--TADDLAETVAL 65
Query: 85  IA-----CDVTKESDVSDAV---DFTISKHNQL---DIMYNNAGVACKTPRSIVDLNLEV 133
           +      C ++ + DV D      F     + L   DI   NAG++  T   + ++    
Sbjct: 66  VEKTGRRC-ISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVESAQ 122
Query: 134 FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
           +D+V+  N+ G    I      MI R  G I+  +S+ G     AQ +Y  SK  +IGL 
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLT 182
Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEE--MSQIYAGVDASRL--LELVYSTGVLE-G 248
           K  A +L  YGI +N ++P  I TP    +     +   ++   L  +E V+++  L+  
Sbjct: 183 KCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYA 242
Query: 249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTS 284
              +P ++  A L+L  + + +++G  L +D G T+
Sbjct: 243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 21  CSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI--QHQLGQQTA--- 75
           C       S +L+++ AL+TG  SGIG+A A  +   GA V I  +  + +  QQ     
Sbjct: 36  CGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI 95
Query: 76  KELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
           +E G  A  +  D++ ES     V         LDI+   AG     P  I DL  E F 
Sbjct: 96  EECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPE-IKDLTSEQFQ 154
Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
           Q   +NV  +   I      ++P +   I+ T+S+           Y+ +K+AI+   + 
Sbjct: 155 QTFAVNVFALF-WITQEAIPLLP-KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRG 212
Query: 196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           +A ++ E GIR+N ++P  I T        QI  G    ++ +    T +      +P +
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTAL------QISGGQTQDKIPQFGQQTPMKRA--GQPAE 264
Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +A   +YLAS ++ YV+     V GG
Sbjct: 265 LAPVYVYLASQESSYVTAEVHGVCGG 290

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----QQTAKELGPNAT 83
           +S  L+ KVAL+TGA+ GIG+A A +    GA VVI       G     +T K  G    
Sbjct: 21  QSMSLQGKVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETLKANGVEGA 79
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            +  DV+ +  V+  ++       Q  I+ NNAG+       +V +  + +  V+  N+ 
Sbjct: 80  GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNL--LVRMKDDEWFDVVNTNLN 137
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
            +    K   R M   R G I+   SV G +G   Q  Y+ +K+ + G  +++A E+   
Sbjct: 138 SLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSR 197
Query: 204 GIRINCISPFAIPTPFVME----EMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
            I +N ++P  I T    E    +   +   +   RL               +  +IA  
Sbjct: 198 AITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRL--------------GQAEEIAKV 243
Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
             +LASD A YV+G  + V+GG 
Sbjct: 244 VGFLASDGAAYVTGATVPVNGGM 266

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 27/261 (10%)
Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKE 92
           VALITGA SGIG+ATA    ++G  V          ++ A E+   G  A  +  DV+ E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGV-ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
               +AV   + K   LDI+  NAG+     P  I DL    +D+ + +N+RG    +  
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAP--IDDLKPFEWDETIAVNLRGTFLTLHL 147
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI--------IGLVKSMAAELCEY 203
           +   +  R  G I+  +S+ G        T++   +          + +V+ +A EL ++
Sbjct: 148 TVPYLKQRGGGAIVVVSSING------TRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP---NDIANAA 260
            IR+N + P AI T   + + +++    + +  +E  +  G +  T  +P    D+A   
Sbjct: 202 HIRVNAVCPGAIETN--ISDNTKLRHEEETAIPVE--WPKGQVPITDGQPGRSEDVAELI 257
Query: 261 LYLASDDAKYVSGHNLVVDGG 281
            +L S+ A++V+G  + +DGG
Sbjct: 258 RFLVSERARHVTGSPVWIDGG 278

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           + +K  L+  A+ GIG+A A      GA+V I     +L +++         ++ CD+ K
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------YVVCDLRK 70
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRGVVAGI 149
           +      +D    K  ++DI+  NAG     P++    +L  E F + +      ++  +
Sbjct: 71  D------LDLLFEKVKEVDILVLNAG----GPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120
Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           ++    M  +  G I+   S + +      +T + ++ A+ G +K+++ E+  YGI +NC
Sbjct: 121 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 180
Query: 210 ISPFAIPTPFVMEEMS-----QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           ++P    T  V E +S     Q+ + +   R+               +P +IA+   +L 
Sbjct: 181 VAPGWTETERVKELLSEEKKKQVESQIPMRRM--------------AKPEEIASVVAFLC 226
Query: 265 SDDAKYVSGHNLVVDGGFTSF 285
           S+ A Y++G  +VVDGG + F
Sbjct: 227 SEKASYLTGQTIVVDGGLSKF 247

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K A++ G   G G AT  + +  GA+V++         +  +E GP    +  D+   ++
Sbjct: 9   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNE 68
Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV--------MRINVRGVV 146
           ++            +D+++ NAGV+           LE FDQV          +N +G  
Sbjct: 69  IAVLGAAAGQTLGAIDLLHINAGVS----------ELEPFDQVSEASYDRQFAVNTKGAF 118
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++  T ++  R  G I+ T+SV    G      YS SK+A++     +AAEL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 176
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP-------NDIANA 259
           +N +SP  I TP      ++  AG+  +   E         G +  P       +++A A
Sbjct: 177 VNSVSPGFIDTP------TKGVAGITEAERAEFKTL-----GDNITPXKRNGTADEVARA 225
Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
            L+LA  +A + +G  L VDGG 
Sbjct: 226 VLFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K A++ G   G G AT  + +  GA+V++         +  +E GP    +  D+   ++
Sbjct: 8   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNE 67
Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV--------MRINVRGVV 146
           ++            +D+++ NAGV+           LE FDQV          +N +G  
Sbjct: 68  IAVLGAAAGQTLGAIDLLHINAGVS----------ELEPFDQVSEASYDRQFAVNTKGAF 117
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++  T ++  R  G I+ T+SV    G      YS SK+A++     +AAEL   GIR
Sbjct: 118 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 175
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP-------NDIANA 259
           +N +SP  I TP      ++  AG+  +   E         G +  P       +++A A
Sbjct: 176 VNSVSPGFIDTP------TKGVAGITEAERAEFKTL-----GDNITPXKRNGTADEVARA 224
Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
            L+LA  +A + +G  L VDGG 
Sbjct: 225 VLFLAF-EATFTTGAKLAVDGGL 246

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN--------AT 83
           L+ +VA++TG A+GIGKA   + +  G+ VVIA  + +  +  A EL  N          
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I C++  E +V++ V  T+    +++ + NN G    +P     ++ + +  V+  N+ 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAE--HISSKGWHAVLETNLT 133
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G     K      +    G I+     T     LA H+   +++ +  L KS+A E    
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEWACS 192
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE--------PND 255
           GIRINC++P  I +   +E                  +     EG+  +        P +
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGS--------------WGQSFFEGSFQKIPAKRIGVPEE 238
Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +++   +L S  A +++G ++ VDGG
Sbjct: 239 VSSVVCFLLSPAASFITGQSVDVDGG 264

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
           AL+TGA  GIG+ T     ++GAKVV     +      AKE  P    +  D+       
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDW---- 64
Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
           DA +  +     +D++ NNA +    P   +++  E FD+   +N+R V    +   R M
Sbjct: 65  DATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQMVARDM 122
Query: 157 IPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI 215
           I R   G I+  +S+   +      TYS +K A+  L K+MA EL  + IR+N ++P  +
Sbjct: 123 INRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVV 182
Query: 216 PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN 275
            T    +   ++ A  + +R L+  +          E  D+ N+ L+L SD +   SG  
Sbjct: 183 LT----DMGKKVSADPEFARKLKERHPL----RKFAEVEDVVNSILFLLSDRSASTSGGG 234
Query: 276 LVVDGGF 282
           ++VD G+
Sbjct: 235 ILVDAGY 241

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT----FIACD 88
           ++KV +ITGA+ GIG      +     +VV           T++ + P+A      +A D
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVV----------ATSRSIKPSADPDIHTVAGD 76
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++K       V   I +  ++D + NNAGV    P   V+   E +D  + +NV G    
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP--FVEXTQEDYDHNLGVNVAGFFHI 134
Query: 149 IKHSTRVMIPRRSGCI--LCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            + +    + + SG I  + T+ V     G      S++K  +  + +S+A E    G+R
Sbjct: 135 TQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVR 194
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N +SP  I TP    E     AG+                G   E  D+ +A LYL  +
Sbjct: 195 VNAVSPGVIKTPXHPAETHSTLAGLHPV-------------GRXGEIRDVVDAVLYL--E 239
Query: 267 DAKYVSGHNLVVDGG 281
            A +++G  L VDGG
Sbjct: 240 HAGFITGEILHVDGG 254

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---------GQQTAKELGPN 81
           + + +V L+TGA +G+G+A A  F   GA VV+ D+               +  +E+   
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
                 +     +    V   +    ++D++ NNAG+     RS   ++ E +D + R++
Sbjct: 87  GGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGIL--RDRSFARISDEDWDIIHRVH 144
Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +RG     + +   M  ++ G I+ T+S +G+ G   Q  YS +K  ++GL  S+A E  
Sbjct: 145 LRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGR 204
Query: 202 EYGIRINCISPFA 214
           +  I  N I+P A
Sbjct: 205 KSNIHCNTIAPNA 217

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIA 86
           ++ K+A++T  +SG+G A+A +   NGA++++     +  +  A  +     G     +A
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 87  CDVTKESDVSDAVDFTISKHNQL---DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            D+ +  D    +D    K   L   DI+  + G     P   ++L +E +D+  R+  R
Sbjct: 65  GDIREPGD----IDRLFEKARDLGGADILVYSTG--GPRPGRFMELGVEDWDESYRLLAR 118
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
             V   + +   M+ +  G ++   SVT L         ++ +  +IG+V+++A EL  +
Sbjct: 119 SAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH 178
Query: 204 GIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           G+ +N + P  I T  V  + E     +G+     L+ + S  +  G   +P ++A+   
Sbjct: 179 GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR-IPMGRVGKPEELASVVA 237
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           +LAS+ A +++G  + VDGG
Sbjct: 238 FLASEKASFITGAVIPVDGG 257

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 39/283 (13%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ-----TAKEL------- 78
           ++++KV L+TG A G G++ A K    GA +++ DI H +        T+++L       
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 79  ---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
              G  A     DV   + VS  +   +++  +LD++  NAG+ C        L ++ F 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI-CPLG---AHLPVQAFA 122
Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GGLAQHTYSV 184
               ++  GV+  +  +   +       I+ T SV GL+            G     YS 
Sbjct: 123 DAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180
Query: 185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLE 238
           +K  +      +AA+L    IR N I P  + T      P   +    + A   A  LL 
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA 240
Query: 239 LVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
              +   +   + E +DI+NA  +LASD+++YV+G    VD G
Sbjct: 241 FP-AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 34/265 (12%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK-------ELGPNATFI 85
           +  V L+TG + GIG A        G +V    + +   ++ A        E G  A  I
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRV---GVNYAANREAADAVVAAITESGGEAVAI 81
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV   +D++        +  +LD + NNAG+    P+ + + ++E  ++ +R+NV G 
Sbjct: 82  PGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGI-VDYPQRVDEXSVERIERXLRVNVTGS 140
Query: 146 V----AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAI----IGLVKSM 196
           +      ++  +R +   + G I+  +S   +LG   Q+  Y+ SK+AI    IGL + +
Sbjct: 141 ILCAAEAVRRXSR-LYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREV 199
Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           AAE    GIR+N + P  I T           +G    R  E   S  V       P ++
Sbjct: 200 AAE----GIRVNAVRPGIIETDLHA-------SGGLPDRAREXAPS--VPXQRAGXPEEV 246
Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A+A LYL S  A YV+G  L V GG
Sbjct: 247 ADAILYLLSPSASYVTGSILNVSGG 271

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 28/261 (10%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIAC 87
           + +++A +TG   GIG +   +   +G +VV        +     +  K LG +      
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIV--DLNLEVFDQVMRINVRGV 145
           +V        A D   ++  ++D++ NNAG+     R +V   +  E +  V+  N+  +
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT----RDVVFRKMTREDWQAVIDTNLTSL 126
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               K     M+ R  G I+  +SV G  G   Q  YS +K+ I G   S+A E+   G+
Sbjct: 127 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 186
Query: 206 RINCISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            +N +SP  I T  V     + + +I A +   RL                P++I +   
Sbjct: 187 TVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL--------------GSPDEIGSIVA 232
Query: 262 YLASDDAKYVSGHNLVVDGGF 282
           +LAS+++ + +G +  ++GG 
Sbjct: 233 WLASEESGFSTGADFSLNGGL 253

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 22/265 (8%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L +KVA ITG  SGIG   A  F+ +G   VIA          A++L    G     ++ 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV     V  AVD  + +  ++DI+ N A      P   +  N   F  VM I+  G   
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN--AFKTVMDIDTSGTF- 141
Query: 148 GIKHSTRVMIPR----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              + +RV+  +      G I+   +  G  G   Q     +K+A+  + + +A E    
Sbjct: 142 ---NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQ 198
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            IR+N ++    P P    E  +   G  AS   ++  S     G   E   IA++ LYL
Sbjct: 199 NIRVNSLA----PGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTE---IAHSVLYL 251
Query: 264 ASDDAKYVSGHNLVVDGG-FTSFKN 287
           AS  A YV+G  LV DGG + +F N
Sbjct: 252 ASPLASYVTGAVLVADGGAWLTFPN 276

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 37  ALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTKE 92
           ALIT    G+GK    K ++ G  V +         +  ++T K++     F+  DVTK+
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
            D+   V+  +S   ++D + NNAG      + +VD   + ++++++ N+  V   +K  
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV 129
Query: 153 TRVMIPRRSGCILCTA--SVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             VM  +  G I+           G + +  ++ +K  ++ L K++A E  EYGI  N +
Sbjct: 130 VPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMV 189
Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
            P  I     + EM +  A +  +R L+  ++T +  G      DIA    +L  DD+  
Sbjct: 190 CPGDI-----IGEMKE--ATIQEARQLK-EHNTPI--GRSGTGEDIARTISFLCEDDSDM 239
Query: 271 VSGHNLVVDG 280
           ++G  + V G
Sbjct: 240 ITGTIIEVTG 249

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-----LGQQTAKELGPNATFIACDV 89
           + A +TG A+G+G     + ++ G KV IADI+       L    A+  GP    +  DV
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV 68
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
                   A D   ++   + I+ NNAGV    P  I + + + +D ++ +N+ GVV G+
Sbjct: 69  ASREGFKMAADEVEARFGPVSILCNNAGVNLFQP--IEESSYDDWDWLLGVNLHGVVNGV 126
Query: 150 KHSTRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                 M+ R      + G ++ TAS+   L   +   Y+ +K A+ GL +S+   L +Y
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKY 186
Query: 204 GIRINCISP 212
            I ++ + P
Sbjct: 187 EIGVSVLCP 195

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVV-----IADIQHQLGQQTAKELGPNATFI 85
           +  +++AL+TGA+ GIG A A   +  G KVV     + +I+    +   K  G   T I
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE--CKSAGYPGTLI 86
Query: 86  A--CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
              CD++ E D+        S+H+ +DI  NNAG+A   P +++  +   +  +  +NV 
Sbjct: 87  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA--RPDTLLSGSTSGWKDMFNVNVL 144
Query: 144 GVVAGIKHSTRVMIPRR--SGCILCTASVTG--LLGGLAQHTYSVSKSAIIGLVKSMAAE 199
            +    + + + M  R    G I+   S++G  +L     H YS +K A+  L + +  E
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204
Query: 200 LCE--YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDI 256
           L E    IR  CISP  + T F  +   +     D  +      +    E   C +P D+
Sbjct: 205 LREAQTHIRATCISPGVVETQFAFKLHDK-----DPEK------AAATYEQMKCLKPEDV 253
Query: 257 ANAALYLASDDA 268
           A A +Y+ S  A
Sbjct: 254 AEAVIYVLSTPA 265

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 25/266 (9%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKV-VIADIQHQLGQQTAK--ELGPNAT 83
           ++   L+ K  L+TG   GIG A   +F   GA +   A  +++L +  +K  + G   T
Sbjct: 7   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 66
Query: 84  FIACDVTKESDVSDAVDFTISKH--NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
              CD +   +    +  T+S     +LDI+ NN G     P   +D   E F   +  N
Sbjct: 67  GSVCDASLRPEREKLMQ-TVSSMFGGKLDILINNLGAIRSKP--TLDYTAEDFSFHISTN 123
Query: 142 VRGVVAGIKHSTRVMIP--RRSGC--ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           +        H +++  P  + SGC  I+  +S+ G++       YS +K A+  L +++A
Sbjct: 124 LESAY----HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            E    GIR N ++P  I TP            V      ++V S   L G   EP +++
Sbjct: 180 CEWASDGIRANAVAPAVIATPLA--------EAVYDDEFKKVVISRKPL-GRFGEPEEVS 230
Query: 258 NAALYLASDDAKYVSGHNLVVDGGFT 283
           +   +L    A Y++G  + VDGG T
Sbjct: 231 SLVAFLCMPAASYITGQTICVDGGLT 256

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 73  QTAKELGPNATFI---ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDL 129
           Q  + LG N   I     D+T E + + AVD   + H +L  + + AG   +    I  +
Sbjct: 53  QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG-GSENIGPITQV 111
Query: 130 NLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI 189
           + E + + + +NV G +  +KH+ R M+    G  +  +S+           Y V+KSA+
Sbjct: 112 DSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 171
Query: 190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT 249
             L++  A EL    +R+N I P  I T  V        A +  S  L   Y+       
Sbjct: 172 DHLMQLAADELGASWVRVNSIRPGLIRTDLV--------AAITESAELSSDYAMCTPLPR 223
Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
             E  D+AN A++L SD A +V+G  + VDGG
Sbjct: 224 QGEVEDVANMAMFLLSDAASFVTGQVINVDGG 255

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVT 90
           L  +  L+TGA  GIG+ T     + GA+VV ++  Q  L     +E  P    +  D+ 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVREC-PGIEPVCVDLG 62
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
                 +A +  +     +D++ NNA VA   P   +++  E FD+   +N+R V+   +
Sbjct: 63  DW----EATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 151 HSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R +I R   G I+  +S            Y  +K A+  L K MA EL  + IR+N 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ++P  + T       S  +        + L        G   E   + NA L+L SD + 
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPL--------GKFAEVEHVVNAILFLLSDRSG 228
Query: 270 YVSGHNLVVDGGFTS 284
             +G  L V+GGF +
Sbjct: 229 MTTGSTLPVEGGFWA 243

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 26/259 (10%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKE---LGPNATFIACD 88
           + K AL+TG++ G+GKA A +   NG  +VI   +  +   +TA+E   LG     +  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V + + + +          +LD+  NNA  A    R +++L    +D  M IN + ++  
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNA--ASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + + ++M     G I+  +S+  +       T  VSK+A+  L + +A EL    I +N
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 209 CISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            +S  AI T      P   + +        A R++E+               D+ +   +
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEI--------------KDMVDTVEF 226
Query: 263 LASDDAKYVSGHNLVVDGG 281
           L S  A  + G  ++VDGG
Sbjct: 227 LVSSKADMIRGQTIIVDGG 245

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVT 90
           L  +  L+TGA  GIG+ T     + GA+VV ++  Q  L     +E  P    +  D+ 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVREC-PGIEPVCVDLG 62
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
                 +A +  +     +D++ NNA VA   P   +++  E FD+   +N+R V+   +
Sbjct: 63  DW----EATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 151 HSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R +I R   G I+  +S            Y  +K A+  L K MA EL  + IR+N 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ++P  + T       S  +        + L        G   E   + NA L+L SD + 
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPL--------GKFAEVEHVVNAILFLLSDRSG 228
Query: 270 YVSGHNLVVDGGFTS 284
             +G  L V+GGF +
Sbjct: 229 MTTGSTLPVEGGFWA 243

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATF--I 85
           +L+ K AL+TG+ +GIGKA A   ++ GA V+I   + +   +T KE+    P+A    +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D+  E    D ++    K+ ++DI+ NN G+    P    D+  E + ++  +N+   
Sbjct: 67  VADLGTEQGCQDVIE----KYPKVDILINNLGIF--EPVEYFDIPDEDWFKLFEVNIXSG 120
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V   +   +  I R+ G ++  AS   +        YS +K+  + L +S+A       +
Sbjct: 121 VRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNV 180
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDAS------RLLELVYSTGVLEGTHCEPNDIANA 259
            +N I P +  T  V   ++ +Y     +      R  +    T +++     P +IA+ 
Sbjct: 181 TVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRL-IRPEEIAHL 239
Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
             +L+S  +  ++G  L +DGG 
Sbjct: 240 VTFLSSPLSSAINGSALRIDGGL 262

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
           P AT++  ++  ++   DAV  TI+   +LD + NNAGV        +D   + F   + 
Sbjct: 55  PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG---LDAGRDAFVASLE 111
Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
            N+    A + H     +    G I+  +S T + G      Y  SK A + L +  A  
Sbjct: 112 RNLIHYYA-MAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVA 170
Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L E+G+R+N + P  + TP     ++      D    L  + +   L      P++IA+ 
Sbjct: 171 LREHGVRVNAVIPAEVMTPLYRNWIATFE---DPEAKLAEIAAKVPLGRRFTTPDEIADT 227
Query: 260 ALYLASDDAKYVSGHNLVVDGGFTSF 285
           A++L S  A + +G  L VDGG+T  
Sbjct: 228 AVFLLSPRASHTTGEWLFVDGGYTHL 253

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 31/258 (12%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE--LGPNATFIACDVTKE 92
           KVA++TGA+ GIG A AA+  S+G  VVI    +  G+  A E   G         +T +
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVI----NYAGKAAAAEEVAGKIEAAGGKALTAQ 83
Query: 93  SDVSDAVD----FTISKH--NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           +DVSD       F  ++     +D++ NNAG+   T  +I +    VFD+V+ +N++G  
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLT--TIAETGDAVFDRVIAVNLKGTF 141
Query: 147 AGIKHSTRVMIPRRSGCIL-CTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             ++ + + +  R  G I+  + S  GLL   +   Y+ +K+ +      ++ EL    I
Sbjct: 142 NTLREAAQRL--RVGGRIINXSTSQVGLL-HPSYGIYAAAKAGVEAXTHVLSKELRGRDI 198
Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYL 263
            +N ++P    T   +E  S          + +       LE  GT   P DIA A  +L
Sbjct: 199 TVNAVAPGPTATDLFLEGKSD--------EVRDRFAKLAPLERLGT---PQDIAGAVAFL 247
Query: 264 ASDDAKYVSGHNLVVDGG 281
           A  D  +V+G  L  +GG
Sbjct: 248 AGPDGAWVNGQVLRANGG 265

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 24/265 (9%)
Query: 35  KVALITGAASGIGKATAAKFISNG---------AKVVIADIQHQLGQQTAKELGPNATFI 85
           + A +TG +SGIG A A    + G         AK V A +         +  G +    
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVD------GLRAAGHDVDGS 78
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           +CDVT   +V  AV   + +   + I+ N+AG          DL+  ++  V+  N+ GV
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGR--NGGGETADLDDALWADVLDTNLTGV 136
Query: 146 VAGIKHSTRVMIPRRSGC--ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
               +   R    R +G   I+  AS  G  G +    Y+ SK  ++G  KS+  EL + 
Sbjct: 137 FRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           GI +N + P  + TP   E + + YA   GV    + E  ++  +  G +  P ++A   
Sbjct: 197 GITVNAVCPGYVETPMA-ERVREGYARHWGVTEQEVHER-FNAKIPLGRYSTPEEVAGLV 254
Query: 261 LYLASDDAKYVSGHNLVVDGGFTSF 285
            YL +D A  ++   L V GG  ++
Sbjct: 255 GYLVTDAAASITAQALNVCGGLGNY 279

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDV 89
           L  ++AL+TG + GIG+  A   +  GA+V I     +    TA  L    +   I  D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           + E+              +LDI+ NNAG +     ++    +  +++VM++NV  V + I
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWGA--ALESYPVSGWEKVMQLNVTSVFSCI 144
Query: 150 KHSTRVMIP--RRSGC------ILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAEL 200
           +     ++P  RRS        ++   SV G+   G   + Y  SK+A+  L + +A EL
Sbjct: 145 QQ----LLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
               I +N I+P   P+      M++  A  +  + LE   S  +  G    P ++A  A
Sbjct: 201 VGEHINVNVIAPGRFPS-----RMTRHIA--NDPQALE-ADSASIPMGRWGRPEEMAALA 252
Query: 261 LYLASDDAKYVSGHNLVVDGGF 282
           + LA     Y++G+ + +DGGF
Sbjct: 253 ISLAGTAGAYMTGNVIPIDGGF 274

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ +V ++TGA+SG+G A        GA V+  D++   G++ A ELG    F   DVT
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN----LEVFDQVMRINVRGVV 146
            E+D + A+ F   +   +  + N AG A      I+  +    L+ F + + +N+ G  
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPG--EKILGRSGPHALDSFARTVAVNLIGTF 121
Query: 147 AGIKHSTRVM------IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
             I+ +  V            G I+ TAS+    G + Q  Y+ SK  +  L    A EL
Sbjct: 122 NXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL 181
Query: 201 CEYGIRINCISPFAIPTP 218
             +GIR+  I+P    TP
Sbjct: 182 ARFGIRVVTIAPGIFDTP 199

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 25/246 (10%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  +VA++TGA+ GIG A A K  S GA+VV+     +  +   +E+   G  A   ACD
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVAC-KTPRSIVDLNLEVFDQVMRINVRGVVA 147
           ++    ++      ++ H + D++ NNAGV     P  +  +    +D ++ +N++    
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGP--LHTMKPAEWDALIAVNLKAPYL 144
Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            ++     MI  + G I+  +S+ G         Y+ SK  + GL+ S A EL ++ +R+
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204
Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD- 266
           + ++P ++ T F +        G+ A +      + G +     EP+DIA+    LA+  
Sbjct: 205 SLVAPGSVRTEFGV--------GLSAKK-----SALGAI-----EPDDIADVVALLATQA 246
Query: 267 DAKYVS 272
           D  ++S
Sbjct: 247 DQSFIS 252

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           + + +VA++TGA +G+G+  A  F   GAKVV+ D+    G  +       A  I  D  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLG---GTHSGDGASQRAADIVVDEI 72
Query: 91  KES------------DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           +++            D +  ++  I    ++DI+ NNAG+     RS+V  + + ++ V 
Sbjct: 73  RKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGIL--RDRSLVKTSEQDWNLVN 130
Query: 139 RINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
            ++++G     + +   M  +  G I+ T+S +G+ G   Q  Y+ +K  +IGL  ++A 
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAI 190
Query: 199 ELCEYGIRINCISPFA 214
           E     +  N I P A
Sbjct: 191 EGARNNVLCNVIVPTA 206

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 20/262 (7%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQ--QTAKELGPNATFIACD 88
           L+   AL+TG + GIG A   +    GA+V   +  + +L +  +  +E G N     CD
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 89  VTKESDVSDAVDFTISK--HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           +   ++  D +  T++     +L+I+ NNAGV     +   D   + ++ +M  N     
Sbjct: 79  LLSRTE-RDKLMQTVAHVFDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAY 135
Query: 147 AGIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
               H +++  P     ++G ++  +S+ G     +   YS SK AI  + KS+A E  +
Sbjct: 136 ----HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAK 191
Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             IR+N ++P  I TP V  E +          +   +  T +  G   +P +++    +
Sbjct: 192 DNIRVNSVAPGVILTPLV--ETAIKKNPHQKEEIDNFIVKTPM--GRAGKPQEVSALIAF 247
Query: 263 LASDDAKYVSGHNLVVDGGFTS 284
           L    A Y++G  +  DGGFT+
Sbjct: 248 LCFPAASYITGQIIWADGGFTA 269

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAKELGPNATFI 85
           + + +V L+TGA  G+G+A A  F   GA VV+ D+         G   A ++       
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 86  ACDVTKESDVSDA----VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
                   D  +A    V   +    ++D++ NNAG+     RS   ++ E +D + R++
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL--RDRSFSRISDEDWDIIQRVH 123
Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +RG     + +      +  G I+ TAS +G+ G   Q  YS +K  ++GL  ++  E  
Sbjct: 124 LRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 183
Query: 202 EYGIRINCISPFA 214
           +  I  N I+P A
Sbjct: 184 KNNIHCNTIAPNA 196

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKEL 78
           GL      +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE 
Sbjct: 13  GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER 72
Query: 79  GPNATFIACDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
              A     D+T      +   + ++       + D++ NNA     TP    D      
Sbjct: 73  SNTAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSN 132
Query: 135 DQVMRINVRGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT 181
            + +   V  ++      T  + P         R+ G    C     S+  L   +    
Sbjct: 133 GKTVETQVAELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187
Query: 182 ------YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDA 233
                 Y++ K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V  
Sbjct: 188 CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPL 247
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
            R                    IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 248 GR-------------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKEL 78
           GL      +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE 
Sbjct: 13  GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER 72
Query: 79  GPNATFIACDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
              A     D+T      +   + ++       + D++ NNA     TP    D      
Sbjct: 73  SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSN 132
Query: 135 DQVMRINVRGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT 181
            + +   V  ++      T  + P         R+ G    C     S+  L   +    
Sbjct: 133 GKTVETQVAELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187
Query: 182 ------YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDA 233
                 Y++ K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V  
Sbjct: 188 CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPL 247
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
            R                    IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 248 GR-------------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKEL 78
           GL      +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE 
Sbjct: 13  GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER 72
Query: 79  GPNATFIACDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
              A     D+T      +   + ++       + D++ NNA     TP    D      
Sbjct: 73  SNTAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSN 132
Query: 135 DQVMRINVRGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT 181
            + +   V  ++      T  + P         R+ G    C     S+  L   +    
Sbjct: 133 GKTVETQVAELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187
Query: 182 ------YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDA 233
                 Y++ K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V  
Sbjct: 188 XMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPL 247
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
            R                    IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 248 GR-------------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKEL 78
           GL      +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE 
Sbjct: 13  GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER 72
Query: 79  GPNATFIACDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
              A     D+T      +   + ++       + D++ NNA     TP    D      
Sbjct: 73  SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSN 132
Query: 135 DQVMRINVRGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT 181
            + +   V  ++      T  + P         R+ G    C     S+  L   +    
Sbjct: 133 GKTVETQVAELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187
Query: 182 ------YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDA 233
                 Y++ K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V  
Sbjct: 188 XMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPL 247
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
            R                    IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 248 GR-------------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           K  +K+A++TGA SG+G+A A      G  V +A  +    Q+TA E+G +A  +  DVT
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT 84
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGV-ACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
               V      T+ K  ++D+++NNAG  A   P    DL    + QV+  N+ G     
Sbjct: 85  DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXE--DLTFAQWKQVVDTNLTGPFLCT 142
Query: 150 KHSTRVMIPR--RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           + + RV   +  R G I+   S++          Y+ +K AI GL KS +
Sbjct: 143 QEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTS 192

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 69  QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD 128
           ++ ++  KE G       CDV+    V+  +    +    +  +  NAGV+   P +  +
Sbjct: 53  EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPAT--E 110
Query: 129 LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTG-------LLGGLAQH 180
           L  E F  V  +NV GV    +   ++ + ++  G I+ T+S++        L G L Q 
Sbjct: 111 LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV 170
Query: 181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV 240
            Y+ SK+A   LVK +AAE    GIR+N +SP  + T    ++ + +       + +   
Sbjct: 171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNT----DQTAHM------DKKIRDH 220
Query: 241 YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
            ++ +      +P ++   A+ L SD A Y++G    +DGG
Sbjct: 221 QASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
           +KV LITGA+ GIG+  A +    GAK+++   +    +  A E+   G  A     DVT
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V+      +    ++D++ NNAGV   +P + V   ++ +++++ +N++GV+ GI 
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV--KVDEWERMIDVNIKGVLWGIG 121
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
               +M  +RSG I+   S+  L        Y  +K A+  +   +  E     IR+ C+
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCV 179
Query: 211 SP 212
           +P
Sbjct: 180 NP 181

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-----DIQHQLGQQTAKELGPNATFI 85
            LE   AL+TG + GIG     +  S GA V        ++   L Q  +K     A+  
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS-- 63
Query: 86  ACDVTKESDVSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
            CD++  S+  + ++   +  H +L+I+ NNAG+     +   D  +E +  +M IN   
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEA 121
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                  +   +     G ++  +SV+G L    +  Y  +K A+  L + +A E  +  
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+N + P  I T  V  EM+ I        L +L+    +      EP ++A    +L 
Sbjct: 182 IRVNGVGPGVIATSLV--EMT-IQDPEQKENLNKLIDRCALRR--MGEPKELAAMVAFLC 236
Query: 265 SDDAKYVSGHNLVVDGGFTS 284
              A YV+G  + VDGG  +
Sbjct: 237 FPAASYVTGQIIYVDGGLMA 256

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 27/266 (10%)
Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-----DIQHQLGQQTAKELGPNATFI 85
            LE   AL+TG + GIG     +  S GA V        ++   L Q  +K     A+  
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS-- 62
Query: 86  ACDVTKESDVSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
            CD++  S+  + ++   +  H +L+I+ NNAG+     +   D  +E +  +M IN   
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEA 120
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                  +   +     G ++  +SV+G L    +  Y  +K A+  L + +A E  +  
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180
Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           IR+N + P  I T  V       E+   +   +D   L  +            EP ++A 
Sbjct: 181 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRM-----------GEPKELAA 229
Query: 259 AALYLASDDAKYVSGHNLVVDGGFTS 284
              +L    A YV+G  + VDGG  +
Sbjct: 230 MVAFLCFPAASYVTGQIIYVDGGLMA 255

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 48/282 (17%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIA 86
           +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE    A    
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 87  CDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
            D+T      +   + ++       + D++ NNA     TP    D       + +   V
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 143 RGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT------YS 183
             ++      T  + P         R+ G    C     S+  L   +          Y+
Sbjct: 121 AELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVY 241
           + K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V   R      
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGR------ 229
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                         IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 230 -------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 48/282 (17%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIA 86
           +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE    A    
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 87  CDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
            D+T      +   + ++       + D++ NNA     TP    D       + +   V
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 143 RGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT------YS 183
             ++      T  + P         R+ G    C     S+  L   +          Y+
Sbjct: 121 AELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 175
Query: 184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVY 241
           + K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V   R      
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGR------ 229
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                         IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 230 -------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVI----ADIQHQLGQQTAKELGPNATFI 85
           ++   +  ++ GA   IG+A A +F   GA VV+    A           ++LG +A  I
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAG--VACKTPRSIVDLNLEVFDQVMRINVR 143
             D+T  ++V  A+     K  ++  + + AG  +A KT   I +++   + QV+ +N+ 
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT---IAEMDEAFWHQVLDVNLT 120
Query: 144 GVVAGIKHSTRVMIPR--RSGCILCTASVTGL-LGGLAQHTYSVSKSAIIGLVKSMAAEL 200
            +      + +  +P+  + G I+  +S  G   GG     Y+ SK A++   + +A E+
Sbjct: 121 SLFL----TAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEV 176
Query: 201 CEYGIRINCISPFAIPTPF----VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
               IR+N + P  I T F       E+ +  AG  + +           EG+     D+
Sbjct: 177 GPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKR----------EGS---SEDV 222
Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A    +LASDDA YV+G    ++GG
Sbjct: 223 AGLVAFLASDDAAYVTGACYDINGG 247

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 48/282 (17%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIA 86
           +E   A++TGAA  IG+A A K    G +VVI     A+    L  +  KE    A    
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 87  CDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
            D+T      +   + ++       + D++ NNA     TP    D       + +   V
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 143 RGVVAGIKHSTRVMIP---------RRSG----CILCTASVTGLLGGLAQHT------YS 183
             ++      T  + P         R+ G    C     S+  L   +          Y+
Sbjct: 121 AELIG-----TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVY 241
           + K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V   R      
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGR------ 229
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                         IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 230 -------REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 28/260 (10%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ----QTAKELGPNATFIACDVT 90
           KV LITG + GIG A+A      G  V +    +        +  +E G  A  +  DV 
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           KE +V    +   ++  +L  + NNAGV  +T R +  + LE   +   INV G     +
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTR-VDGITLERLQRXFEINVFGSFLCAR 144
Query: 151 HSTRVMIPR---RSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIR 206
            + +    R     G I+  +S    LG   Q+  Y+ +K AI      +A E+   GIR
Sbjct: 145 EAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIR 204
Query: 207 INCISPFAIPTPF-----VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           +N + P  I T       +      +   V   R            GT  E   +A A +
Sbjct: 205 VNAVRPGIIETDIHASGGLPNRARDVAPQVPXQR-----------AGTARE---VAEAIV 250
Query: 262 YLASDDAKYVSGHNLVVDGG 281
           +L  D A Y +G  L V GG
Sbjct: 251 WLLGDQASYTTGALLDVTGG 270

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQH----QLGQQTAKELGPNATFIACDVT 90
           +V ++TGA+ GIG+  A +    GA V I   +H    ++  Q A+ LG     + CD +
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITG-RHLDTLRVVAQEAQSLGGQCVPVVCDSS 64
Query: 91  KESDVSDAVD-FTISKHNQLDIMYNNAGVACKT-----PRSIVDLNLEVFDQVMRINVRG 144
           +ES+V    +     +  +LD++ NNA    +T      ++  +    ++D +  + +RG
Sbjct: 65  QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRG 124
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                 +  R+M+P   G I+  +S  G L  +    Y V K+A   L    A EL  +G
Sbjct: 125 HYFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHELRRHG 183
Query: 205 IRINCISPFAIPTPFVMEEMSQ 226
           +    + P  + T  + E M++
Sbjct: 184 VSCVSLWPGIVQTELLKEHMAK 205

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF--IACDVTKESDV 95
            ITGA SG G+A A +F   G  +V+   + +  Q  A EL        +  DV   +  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           S AVD    +   L  + NNAG+A  T P    D  L+ +D  +  N++G++    +STR
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLALGTDPAQSCD--LDDWDTXVDTNIKGLL----YSTR 138
Query: 155 VMIPR-----RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +++PR         I+   SV G       H Y  +K+ +     ++  +L   G+R+  
Sbjct: 139 LLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN 198
Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-CEPNDIANAALYLASDDA 268
           + P          E S +  G D +R  +  Y+     G H  +P DIA    ++ +  A
Sbjct: 199 LEP-----GLCESEFSLVRFGGDQAR-YDKTYA-----GAHPIQPEDIAETIFWIXNQPA 247

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 10/256 (3%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L +KV +I+G    +G   A +    GA +V+A    +  +  AK++   G  A  +  D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +T ++ V+  VD T+  + ++D++ NNA     + +   +   E     + + V G +  
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNA-FRVPSMKPFANTTFEHMRDAIELTVFGALRL 127
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           I+  T  +     G ++   S+           Y ++KSA++ + +++A EL E GIR+N
Sbjct: 128 IQGFTPAL-EESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 209 CISP---FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            + P   +        E  +  Y G     +     +   L+    E +++A+A L++AS
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKY-GTSVEDIYNAAAAGSDLKRLPTE-DEVASAILFMAS 244
Query: 266 DDAKYVSGHNLVVDGG 281
           D A  ++G  L V+ G
Sbjct: 245 DLASGITGQALDVNCG 260

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           E+ AL+TG ASG+G+A A    + G +VV+ D++ +         G +  ++  DVT+E 
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------GEDLIYVEGDVTREE 52
Query: 94  DVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           DV  AV     +   L  + + AGV  A K         LE F +V+ +N+ G    ++ 
Sbjct: 53  DVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111
Query: 152 STRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           +   M         + G I+ TASV    G + Q  Y+ SK  ++ L    A EL  +GI
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171
Query: 206 RINCISPFAIPTPFV 220
           R+  ++P    TP +
Sbjct: 172 RVVTVAPGLFDTPLL 186

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 45/258 (17%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV---------------IADIQHQLGQQTAK 76
           L+ ++ L+TGA+ GIG+  A  +   GA V+               IAD QH   Q    
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 77  ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFD 135
           +L      + C   +   V+D +    + + +LD + +NAG+  +  P S  D   +++ 
Sbjct: 72  DL------LTCTAEECRQVADRI---AAHYPRLDGVLHNAGLLGEIGPMSEQDP--QIWQ 120
Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
            VM++NV       +    +++   +G ++ T+S  G  G      Y+ SK A  G+++ 
Sbjct: 121 DVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQV 180
Query: 196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           +A E     +R+NCI+P    T       +  +   D  +L                P D
Sbjct: 181 LADEYQNRSLRVNCINPGGTRTSM----RASAFPTEDPQKL--------------KTPAD 222
Query: 256 IANAALYLASDDAKYVSG 273
           I    L+L  DD++  +G
Sbjct: 223 IMPLYLWLMGDDSRRKTG 240

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFI--SNG-AKVVIADIQHQLGQQTAKELG---PNA 82
           + +L +K  LITGA++GIGKATA +++  SNG  K+++A  + +  ++  K +    PNA
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA 87
Query: 83  T--FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
                  D+T+   +   ++    +   +DI+ NNAG A  + R +  +  E    V   
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQIATEDIQDVFDT 146
Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           NV  ++   +    +   + SG I+   S+ G         Y  SK A+     S+  EL
Sbjct: 147 NVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKEL 206
Query: 201 CEYGIRINCISPFAIPTPFVM 221
               IR+  I+P  + T F +
Sbjct: 207 INTKIRVILIAPGLVETEFSL 227

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 26/264 (9%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATF-I 85
           S   +EKV +ITG +SG GK  A +F   GA+VVI     +  ++   E+   P     +
Sbjct: 1   SNAXKEKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV    D+   ++    K  ++DI+ NNA      P    DL++  ++ V+ I + G 
Sbjct: 61  QXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAE--DLSVNGWNSVINIVLNGT 118
Query: 146 VAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC-EY 203
               +   +  I +   G I+   +      G      + +K+ ++   K++A E   +Y
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKY 178
Query: 204 GIRINCISPFAIPTP------FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           GIR+N I+P  I         ++ EE         A R ++ V   G L GT   P +IA
Sbjct: 179 GIRVNAIAPGPIERTGGADKLWISEEX--------AKRTIQSV-PLGRL-GT---PEEIA 225
Query: 258 NAALYLASDDAKYVSGHNLVVDGG 281
             A YL SD+A Y++G     DGG
Sbjct: 226 GLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 78  LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
           LG    F+  D+   S     VD  +++  ++D + NNAG+A       +DL  E FD +
Sbjct: 77  LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI 136
Query: 138 MRINVRGVVAGIKHSTRVMI---PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           + +N+RG V   +   +  +    R S  I+   SV+ +     +  Y  SK+ +    +
Sbjct: 137 VGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQ 196
Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
            +A  L E GI +  + P  I +      +S  Y G        L+ S  V      EP 
Sbjct: 197 GLALRLAETGIAVFEVRPGIIRSD-XTAAVSGKYDG--------LIESGLVPXRRWGEPE 247
Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGFT 283
           DI N    LA     + +G  +  DGG +
Sbjct: 248 DIGNIVAGLAGGQFGFATGSVIQADGGLS 276

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 28/263 (10%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL---GPNATFIAC 87
           L+ KVAL+TGA+ GIG+A A +  ++GA V I    + +  ++T  E+   G +A  I  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 88  DVTKESDVS---DAVDFTISKH---NQLDIMYNNAGVACKTPRSIVDLNLE-VFDQVMRI 140
           ++     V     ++D  +       + DI+ NNAG+    P + ++   E  FD+ + +
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG---PGAFIEETTEQFFDRXVSV 121
Query: 141 NVRGVVAGIKHS-TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           N +     I+ + +R+    R   I   A+   L   +A   YS +K AI     ++A +
Sbjct: 122 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIA---YSXTKGAINTXTFTLAKQ 178
Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIAN 258
           L   GI +N I P  + T    E +S               Y+T +       E  DIA+
Sbjct: 179 LGARGITVNAILPGFVKTDXNAELLSDPXXK---------QYATTISAFNRLGEVEDIAD 229
Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
            A +LAS D+++V+G  + V GG
Sbjct: 230 TAAFLASPDSRWVTGQLIDVSGG 252

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ KVALITGA+SGIG+ATA    + GA V IA  + +  +    EL   G     +  D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V     V  AV  T+     LDI+ NNAG+    P  + D +   + + +  N    + G
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIXLLGP--VEDADTTDWTRXIDTN----LLG 118
Query: 149 IKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           + + TR  +P   R  G ++  +S+ G +       Y  +K  +    +++  E+ E G+
Sbjct: 119 LXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 206 RINCISPFAIPTPF 219
           R+  I P    T  
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ KVALITGA+SGIG+ATA    + GA V IA  + +  +    EL   G     +  D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V     V  AV  T+     LDI+ NNAG+    P  + D +   + +++  N+ G++  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLM-- 120
Query: 149 IKHSTRVMIP---RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             + TR  +P   R  G ++  +S+ G +       Y  +K  +    +++  E+ E G+
Sbjct: 121 --YMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 206 RINCISPFAIPTPF 219
           R+  I P    T  
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGP 80
           +S +   L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A    +E G 
Sbjct: 1   MSLKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 60
Query: 81  NATFIACDVT--KESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQV 137
              +   D+      +        +  + +LD + +NAG+     P S  + N +V+  V
Sbjct: 61  QPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMS--EQNPQVWQDV 118
Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           M+INV       +    +++   +G ++ T+S  G  G      Y+ SK A  G+++ +A
Sbjct: 119 MQINVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 178
Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            E  +  +R+NCI+P    T       +  +   D  +L                P DI 
Sbjct: 179 DEYQQR-LRVNCINPGGTRTAM----RASAFPTEDPQKLK--------------TPADIM 219
Query: 258 NAALYLASDDAKYVSG 273
              L+L  DD++  +G
Sbjct: 220 PLYLWLMGDDSRRKTG 235

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 24/266 (9%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-------ADIQHQLGQQTAKELG 79
           T+   L+ KV +I G    +G  TA  F      +V+       +D  ++L  +  ++ G
Sbjct: 4   TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-EDQG 62
Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
                   D++ E +V+   DF   +  ++DI  N  G   K P  IV+ +   FD +  
Sbjct: 63  AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKP--IVETSEAEFDAMDT 120
Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           IN +     IK + + M P      + T+ +    G  +  TY+ +K+ +    ++ + E
Sbjct: 121 INNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYS--TYAGNKAPVEHYTRAASKE 178
Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-CEPNDIAN 258
           L +  I +N I+P  + T F   + ++       S+ +          G    +  DIA 
Sbjct: 179 LMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAM----------GNQLTKIEDIAP 228
Query: 259 AALYLASDDAKYVSGHNLVVDGGFTS 284
              +L + D  +++G  +  +GG+T+
Sbjct: 229 IIKFLTT-DGWWINGQTIFANGGYTT 253

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 15/230 (6%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           +K+ +ITGA+SGIG+A A +F   G  +++  +  ++ +  A  L PN      DVT + 
Sbjct: 16  KKLVVITGASSGIGEAIARRFSEEGHPLLL--LARRVERLKALNL-PNTLCAQVDVTDKY 72
Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
               A+      +   D + NNAG+         + N   + ++  +NV G++ G++   
Sbjct: 73  TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN--EWQRMFDVNVLGLLNGMQAVL 130
Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
             M  R  G I+  +S+ G         Y  +K A+  + +++  E+    +R+  I+P 
Sbjct: 131 APMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPS 190
Query: 214 AIPTPFVMEEMS-QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           A+ T  +    S QI  G DA R    V   GVL       +D+A A L+
Sbjct: 191 AVKTELLSHTTSQQIKDGYDAWR----VDMGGVLAA-----DDVARAVLF 231

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNAT 83
           + + LITGA  GIG+A A +F          +    L  +TA +L          G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD 61
Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I  D++  +DV       + ++  +D + NNAGV      ++ DL  E FD  M  N++
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLK 119
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G     +    +M  + SG I    SV           Y +SK    GLV++M     + 
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 179
Query: 204 GIRINCISPFAIPTP 218
            +RI  + P A+ TP
Sbjct: 180 NVRITDVQPGAVYTP 194

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVV---------------IADIQHQLGQQTAK 76
           L+ ++ L+TGA+ GIG+  A  +   GA V+               IAD QH   Q    
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 77  ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFD 135
           +L      + C   +   V+D +    + + +LD + +NAG+  +  P S  D   +++ 
Sbjct: 73  DL------LTCTAEECRQVADRI---AAHYPRLDGVLHNAGLLGEIGPXSEQDP--QIWQ 121
Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
            V ++NV       +    +++   +G ++ T+S  G  G      Y+ SK A  G  + 
Sbjct: 122 DVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQV 181
Query: 196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           +A E     +R+NCI+P    T       +  +   D  +L                P D
Sbjct: 182 LADEYQNRSLRVNCINPGGTRT----SXRASAFPTEDPQKLK--------------TPAD 223
Query: 256 IANAALYLASDDAKYVSG 273
           I    L+L  DD++  +G
Sbjct: 224 IXPLYLWLXGDDSRRKTG 241

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A    +E G    +   
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 88  DV---TKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVR 143
           D+   T E+    A    ++ + +LD + +NAG+     P S  + N +V+  VM++NV 
Sbjct: 70  DLLTCTSENCQQLAQRIAVN-YPRLDGVLHNAGLLGDVCPMS--EQNPQVWQDVMQVNVN 126
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                 +    +++   +G ++ T+S  G  G      Y+ SK A  G+++ +A E  + 
Sbjct: 127 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQ 185
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +R+NCI+P    T       +  +   D  +L                P DI    L+L
Sbjct: 186 RLRVNCINPGGTRTAM----RASAFPTEDPQKLK--------------TPADIMPLYLWL 227
Query: 264 ASDDAKYVSG 273
             DD++  +G
Sbjct: 228 MGDDSRRKTG 237

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 25/262 (9%)
Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQ---QTAKELGPNATFIA 86
           LE K ALITG A+   I    A  F   GA++       +L +   + AK  G +   + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-VK 77
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRG 144
           CDV+ + D+ +   F       LDI+ ++   A K      ++D + E F   M I+V  
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYS 137
Query: 145 VVAGIKHSTRVMIPR---RSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAEL 200
           ++A     TR ++P    R+G I+ T S  G    +  +    ++K+A+   V+ +A ++
Sbjct: 138 LIA----LTRELLPLMEGRNGAIV-TLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDI 192
Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            ++G RIN IS   + T          Y+      L+E         G      D+ + A
Sbjct: 193 AKHGHRINAISAGPVKTL-------AAYSITGFHLLMEHTTKVNPF-GKPITIEDVGDTA 244
Query: 261 LYLASDDAKYVSGHNLVVDGGF 282
           ++L SD A+ ++G  + VD G+
Sbjct: 245 VFLCSDWARAITGEVVHVDNGY 266

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLEVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ---HQLGQQTAKELGPNATFIACD 88
           L  + AL+TG++ GIG A A      GA V++  ++       QQ     G  A  +A D
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +++    +D ++        +DI+  NA        S +  N   F   + +N+   V  
Sbjct: 91  LSEAGAGTDLIE-RAEAIAPVDILVINASAQINATLSALTPNDLAFQ--LAVNLGSTVDM 147
Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           ++ +   M+ R+ G ++   S+  L        Y+ +K+A   L++S A +     + +N
Sbjct: 148 LQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLN 207
Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            ++P  + T    +  +Q   G D     E V +   + G    P ++  AAL+LAS+  
Sbjct: 208 TLAPGLVDTDRNADRRAQDPEGWD-----EYVRTLNWM-GRAGRPEEMVGAALFLASEAC 261
Query: 269 KYVSGHNLVVDGGF 282
            +++G  + + GG+
Sbjct: 262 SFMTGETIFLTGGY 275

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTK 91
           ++ LITGA  GIG+ TA +F    +K+V+ DI     ++TA   K LG        D + 
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN 91
Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             D+  +     ++   + I+ NNAGV   +   +        ++   +NV       K 
Sbjct: 92  REDIYSSAKKVKAEIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFWTTKA 149
Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY---GIRIN 208
               M     G I+  AS  G +       Y  SK A +G  K++  EL      G++  
Sbjct: 150 FLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTT 209
Query: 209 CISPFAIPTPFV 220
           C+ P  + T F+
Sbjct: 210 CLCPNFVNTGFI 221

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 28/249 (11%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A    +E G    +   
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 88  DVT--KESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVRG 144
           D+      D           + +LD + +NAG+     P S  D   +V+  VM++NV  
Sbjct: 72  DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQD--PQVWQDVMQVNVNA 129
Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                +    +++   +G ++ T+S  G  G      Y+ SK A  G+++ +A E  +  
Sbjct: 130 TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR- 188
Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +R+NCI+P    T       +  +   D  +L                P DI    L+L 
Sbjct: 189 LRVNCINPGGTRTAM----RASAFPTEDPQKLK--------------TPADIMPLYLWLM 230
Query: 265 SDDAKYVSG 273
            DD++  +G
Sbjct: 231 GDDSRRKTG 239

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 36  VALITGAASGIGKATAAKFISNGAKV--VIADIQHQLGQQTAKELGPNATFIACDV---- 89
           V LITG +SGIG   A +  S+ ++   V A ++     +T   L   A  +AC      
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLE 60
Query: 90  TKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           T + DV D+     ++      ++D++  NAG+    P  +  L  +    V+ +NV G 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGT 118
Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178
Query: 206 RINCISPFAIPTPFV 220
            ++ I    + T F+
Sbjct: 179 HLSLIECGPVHTAFM 193

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDV 95
           + L+TGA +G G+    +FI  G KV+    + +  Q+   ELG N      DV   + +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61
Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV 155
            + +    ++   +DI+ NNAG+A     +    ++E ++ ++  N +G+V   +     
Sbjct: 62  EEMLASLPAEWCNIDILVNNAGLALGMEPAH-KASVEDWETMIDTNNKGLVYMTRAVLPG 120
Query: 156 MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
           M+ R  G I+   S  G       + Y  +K+ +     ++  +L    +R+  I P
Sbjct: 121 MVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           KV L+TGA+SG G+A A   ++ G  V+    + +            A  I+ DVT    
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGER 65
Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           +       ++++ ++D++ NNAG      R+ V    E  ++ +R      V G    TR
Sbjct: 66  IDVVAADVLARYGRVDVLVNNAG------RTQVGAFEETTERELRDLFELHVFGPARLTR 119
Query: 155 VMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            ++P    R SG ++  +S  G L       YS +K+A+  L + +A E+  +GI++  +
Sbjct: 120 ALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIV 179
Query: 211 SPFAIPT 217
            P A  T
Sbjct: 180 EPGAFRT 186

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A    +E G    +   
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 88  DV---TKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVR 143
           D+   T E +        +  + +LD + +NAG+     P S  + N +V+  V +INV 
Sbjct: 91  DLLTCTSE-NCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXS--EQNPQVWQDVXQINVN 147
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                 +    +++   +G ++ T+S  G  G      Y+ SK A  G  + +A E  + 
Sbjct: 148 ATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR 207
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +R+NCI+P    T       +  +   D  +L                P DI    L+L
Sbjct: 208 -LRVNCINPGGTRT----AXRASAFPTEDPQKLK--------------TPADIXPLYLWL 248
Query: 264 ASDDAKYVSG 273
             DD++  +G
Sbjct: 249 XGDDSRRKTG 258

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 17/263 (6%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQQTA-KELGPNATFIA-- 86
           L E VA++TG +SGIG AT    +  GA V     D +     ++A ++  P A   A  
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV     V    +          I+ NNAG    +  +  +   E + + +++    V+
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS--TFAETTDEAWSEELQLKFFSVI 123
Query: 147 AGIKHSTRVMIP----RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
               H  R  +P    R    I+C  S+            S +++ +  LV+SMA E   
Sbjct: 124 ----HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAP 179
Query: 203 YGIRINCISPFAIPT-PFVMEEMSQIYAGVDASRLL-ELVYSTGVLEGTHCEPNDIANAA 260
            G+R+N I    + +  +     ++    +D ++   +L  +  +  G   +P + A A 
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239
Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
           L+LAS  + Y +G ++ V GG +
Sbjct: 240 LFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVI------ADIQHQLGQQTAKELGPNATFI 85
           L+ K  LITG++ GIG ATA  F   GAKV +      A+I   +    A + G  A F 
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-DGGDAAFFA 63
Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNA-GVACKTPRSIVDLNLEVFDQVMRINVRG 144
           A   T E+     VD  ++K   +D++ NNA G+  + P   +D     +D VM  N+R 
Sbjct: 64  ADLATSEA-CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF--YDAVMDANIRS 120
Query: 145 VVAGIKHSTRVMIPR---------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
           VV     +T+  +P          ++  ++ T S+ G  GG        +  A +  V  
Sbjct: 121 VVM----TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHK 176
Query: 196 MAAEL-CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
              +   + G+R N +SP  + T F  ++   +   +          S G+  G      
Sbjct: 177 NWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRI----------SNGIPMGRFGTAE 226
Query: 255 DIANAALYLASDDAK-YVSGHNLVVDGG 281
           ++A A L+ AS  A  Y++G  L ++GG
Sbjct: 227 EMAPAFLFFASHLASGYITGQVLDINGG 254

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 30/250 (12%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA----KELGPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A    +E G    +   
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 88  DV---TKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVR 143
           D+   T E+    A    ++ + +LD + +NAG+     P S  + N +V+  V ++NV 
Sbjct: 70  DLLTCTSENCQQLAQRIAVN-YPRLDGVLHNAGLLGDVCPXS--EQNPQVWQDVXQVNVN 126
Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                 +    +++   +G ++ T+S  G  G      Y+ SK A  G  + +A E  + 
Sbjct: 127 ATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR 186
Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +R+NCI+P    T       +  +   D  +L                P DI    L+L
Sbjct: 187 -LRVNCINPGGTRTAM----RASAFPTEDPQKLK--------------TPADIXPLYLWL 227
Query: 264 ASDDAKYVSG 273
             DD++  +G
Sbjct: 228 XGDDSRRKTG 237

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S + ++ +A+ITGA+ GIG   AA   ++G +VV+     Q  ++   E+  +   +   
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP 61
Query: 89  VTKESDVSDAV--DFTI----SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
           +    D++D    D  I     K+  +DI+ N A        S     ++ F ++  INV
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLS---EPVDNFRKIXEINV 118
Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                 +K  T +   +++G I   AS     G      Y  +K A++GL +S+  EL  
Sbjct: 119 IAQYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178
Query: 203 YGIRINCISPFAIP--------TPFVMEEMSQ 226
            GIR+  + P  +         TPF  EE  Q
Sbjct: 179 LGIRVTTLCPGWVNTDXAKKAGTPFKDEEXIQ 210

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV-- 89
            E KVAL+TGAA GIG A      + GA+V +AD                   IA D+  
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA--------------VAGIAADLHL 71
Query: 90  ---TKESDVSDAVDFTISKH-NQLDIMYNNAGVACK---TPRSIVDLNLEVFDQVMRINV 142
               +E+  +D +   ++    +LDI+ NNAGV  +   T  +  D +L      + +NV
Sbjct: 72  PGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS-----LGVNV 126
Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                  + +  +      G I+  AS  GL  G     Y ++K+A+  L +    +   
Sbjct: 127 EAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAP 186
Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            GIRIN + P  + TP +    ++   G D  R +  +  T V  G   EP DIA+  L+
Sbjct: 187 QGIRINAVCPNEVNTPXLRTGFAK--RGFDPDRAVAELGRT-VPLGRIAEPEDIADVVLF 243
Query: 263 LASDDAKYVSGHNLVVDGG 281
           LASD A+Y+ G  + V+GG
Sbjct: 244 LASDAARYLCGSLVEVNGG 262

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY 241
           Y+ SK+A+   V+  AA   E G+R+N I+P A  TP        + AG+   R  E + 
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL-------LQAGLQDPRYGESIA 207
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
                 G   EP+++A+   +L S  A YV G  +V+DGG 
Sbjct: 208 KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQ-----LGQ-QTAKE----LGPNATFIAC 87
            ITGA+ GIGKA A K   +GA +VIA    Q     LG   TA E    +G  A     
Sbjct: 49  FITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV 108
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV  E  +S AV+  I K   +DI+ NNA     T  + +D   +  D +M +N RG   
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRLDLMMNVNTRGTYL 166
Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQH-TYSVSKSAIIGLVKSMAAELCEYGI 205
             K     +   +   IL  +    L      QH  Y+++K  +   V  MA E  +  I
Sbjct: 167 ASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGEI 225
Query: 206 RINCISP 212
            +N + P
Sbjct: 226 AVNALWP 232

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 86/218 (39%), Gaps = 18/218 (8%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---------- 78
           S  L  K   ITGA+ GIG A A +   +GA V IA        +    +          
Sbjct: 1   SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60
Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           G     + CD+ +E  V  AV  T+     +DI+ NNA       R  +D   + FD   
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL--RGTLDTPXKRFDLXQ 118
Query: 139 RINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHT-YSVSKSAIIGLVKSM 196
           ++N RG     +     ++   +  IL  A    L       HT Y+++K     +   +
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGL 178
Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS 234
           AAE    G+ IN + P  +    +  +      GVDA+
Sbjct: 179 AAEFGPQGVAINALWPRTV----IATDAINXLPGVDAA 212

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 116/289 (40%), Gaps = 54/289 (18%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--QQTAKELGPNATF 84
           T     E   A+ITG A  IG + A +    G +VV+   +H  G  Q+   EL  NA  
Sbjct: 4   TSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVV-HYRHSEGAAQRLVAEL--NAAR 60
Query: 85  IACDVTKESD----------VSDAVDFTISKHNQLDIMYNNAGVACKTP----------- 123
               V  + D            D +D +     + D++ NNA     TP           
Sbjct: 61  AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 120
Query: 124 --RSIVDLNLEVFDQ-------VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL 174
             + I     E+F         ++R   R    G    +R +    S   LC A     L
Sbjct: 121 DAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL----SVVNLCDAMTDLPL 176
Query: 175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP-FAIPTPFVMEEMSQIYAGVDA 233
            G     Y+++K A+ GL ++ A EL    IR+N ++P  ++  P + +E  + Y     
Sbjct: 177 PGFC--VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEY----- 229
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
            R + L    G  E +  +   IA+A  +L S DA Y++G  L VDGG 
Sbjct: 230 RRKVPL----GQSEASAAQ---IADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 114/289 (39%), Gaps = 54/289 (18%)
Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--QQTAKELGPNATF 84
           T     E   A+ITG A  IG + A +    G +VV+   +H  G  Q+   EL  NA  
Sbjct: 4   TSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVV-HYRHSEGAAQRLVAEL--NAAR 60
Query: 85  IACDVTKESD----------VSDAVDFTISKHNQLDIMYNNAGVACKTP----------- 123
               V  + D            D +D +     + D++ NNA     TP           
Sbjct: 61  AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 120
Query: 124 --RSIVDLNLEVFDQ-------VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL 174
             + I     E+F         ++R   R    G    +R +    S   LC A     L
Sbjct: 121 DAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL----SVVNLCDAXTDLPL 176
Query: 175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP-FAIPTPFVMEEMSQIYAGVDA 233
            G     Y+ +K A+ GL ++ A EL    IR+N ++P  ++  P   +E  + Y     
Sbjct: 177 PGFC--VYTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAXPQETQEEY----- 229
Query: 234 SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
            R + L    G  E +  +   IA+A  +L S DA Y++G  L VDGG 
Sbjct: 230 RRKVPL----GQSEASAAQ---IADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 14/255 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIAC 87
            + KVA ITG  +G+GK       S GA+ VIA    D+     +Q + + G     I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV-V 146
           DV     V + V   I      +I+ NNA     +P   +  N   +  +  I + G   
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN--AWKTITDIVLNGTAF 141
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++   +++  ++    L   ++    G       + +K+ +  + KS+AAE  +YG+R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
            N I P  I T          ++ +D +   E      +  G      ++AN A +L SD
Sbjct: 202 FNVIQPGPIKT-------KGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSD 254
Query: 267 DAKYVSGHNLVVDGG 281
            A +++G  +  DGG
Sbjct: 255 YASWINGAVIKFDGG 269

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 14/255 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIAC 87
            + KVA ITG  +G+GK       S GA+ VIA    D+     +Q + + G     I C
Sbjct: 24  FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV-V 146
           DV     V + V   I      +I+ NNA     +P   +  N   +  +  I + G   
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN--AWKTITDIVLNGTAF 141
Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++   +++  ++    L   ++    G       + +K+ +    KS+AAE  +YG R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXR 201
Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
            N I P  I T          ++ +D +   E      +  G      ++AN A +L SD
Sbjct: 202 FNVIQPGPIKT-------KGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSD 254
Query: 267 DAKYVSGHNLVVDGG 281
            A +++G  +  DGG
Sbjct: 255 YASWINGAVIKFDGG 269

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 14/256 (5%)
Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG-PNATFIACDVT 90
           L  K ALIT    G G AT + F+  GA+V        L    A+  G P   F+  D+T
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQV--------LTTARARPEGLPEELFVEADLT 60
Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            +   +   + T  +   +D++ +  G +         L+ + +   + +N+   V   +
Sbjct: 61  TKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDR 120
Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV-KSMAAELCEYGIRINC 209
                 + R SG ++   S+  +L      T   +  A +    K+ + E+   G+R+  
Sbjct: 121 QLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKGVRVVR 180
Query: 210 ISPFAIPTP--FVMEEMSQIYAGVDASRLLELVYST--GVLEGTHCEPNDIANAALYLAS 265
           +SP  I T     + E     AG D     +++     G+  G   +P ++AN   +LAS
Sbjct: 181 VSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANLIAFLAS 240
Query: 266 DDAKYVSGHNLVVDGG 281
           D A  ++G    +DGG
Sbjct: 241 DRAASITGAEYTIDGG 256

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY 241
           Y+ SK A+  L +    +    G+R+N ++P A+ TP +    +    G    R +  + 
Sbjct: 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL- 211
Query: 242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK 289
                 G   EP ++A A  +L    A ++ G  L VDGG  +    K
Sbjct: 212 ------GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRAK 253

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP--FAIP--TPFVMEEMSQIYAGVD 232
           L    Y+++K A+ GL +S A EL    IR+N +SP    +P   PF ++E        D
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQE--------D 241
Query: 233 ASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
             R + L       E       ++++  ++L S  AKY++G  + VDGG++
Sbjct: 242 YRRKVPLYQRNSSAE-------EVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATF 84
           S  LE KVA+ITGA+ GIG+A A     +G  + +     D   ++  +  +E G    +
Sbjct: 19  SHMLEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFY 78
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
              DV+K   V +     + +   +D++  NAG+     + + +L+ E F +++ +N+ G
Sbjct: 79  HHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLG 136
Query: 145 VVAGIKHSTRVMIPRRSG--CILCTASVTGLL---GGLAQHTYSVSKSAIIGLVKSMAAE 199
           V   +K     +  +R+G   ++ T+ V+  L   GG     Y  +K A   LV++   E
Sbjct: 137 VWRTLKAFLDSL--KRTGGLALVTTSDVSARLIPYGG----GYVSTKWAARALVRTFQIE 190
Query: 200 LCEYGIRINCISPFAIPTPF 219
             +  +R   + P A+ T F
Sbjct: 191 NPD--VRFFELRPGAVDTYF 208

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACD 88
           E KVA+ITGA+ GIG+A A     +G  + +     D   ++  +  +E G    +   D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60
Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+K   V +     + +   +D++  NAG+     + + +L+ E F +++ +N+ GV   
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRT 118
Query: 149 IKHSTRVMIPRRSG--CILCTASVTGLL---GGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           +K     +  +R+G   ++ T+ V+  L   GG     Y  +K A   LV++   E  + 
Sbjct: 119 LKAFLDSL--KRTGGLALVTTSDVSARLIPYGG----GYVSTKWAARALVRTFQIENPD- 171
Query: 204 GIRINCISPFAIPTPF 219
            +R   + P A+ T F
Sbjct: 172 -VRFFELRPGAVDTYF 186

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATF 84
           L+ K  ++ G A+   I    A    + GAK++      +L ++  +EL     G  +  
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERL-ERNVRELADTLEGQESLV 62
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR-----SIVDLNLEVFDQVMR 139
           + CDVT + +++   + TI +  ++  ++  A       R       VD + + F     
Sbjct: 63  LPCDVTNDEELTACFE-TIKQ--EVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQN 119
Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV---SKSAIIGLVKSM 196
           I+   + A  + + +VM     G IL   ++T L G      Y+V   +K+++   VK +
Sbjct: 120 ISAFSLTAVAREAKKVMTE--GGNIL---TLTYLGGERVVKNYNVMGVAKASLEASVKYL 174
Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           A +L ++GIR+N IS   I T      +S    G D + +L  +     L  T  +  ++
Sbjct: 175 ANDLGQHGIRVNAISAGPIRT------LSAKGVG-DFNSILREIEERAPLRRTTTQE-EV 226
Query: 257 ANAALYLASDDAKYVSGHNLVVDGGF 282
            + A++L SD A+ V+G N+ VD G+
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATF 84
           L+ K  ++ G A+   I    A    + GAK++      +L ++  +EL     G  +  
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERL-ERNVRELADTLEGQESLV 62
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR-----SIVDLNLEVFDQVMR 139
           + CDVT + +++   + TI +  ++  ++  A       R       VD + + F     
Sbjct: 63  LPCDVTNDEELTACFE-TIKQ--EVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQN 119
Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV---SKSAIIGLVKSM 196
           I+   + A  + + +VM     G IL   ++T L G      Y+V   +K+++   VK +
Sbjct: 120 ISAFSLTAVAREAKKVMTE--GGNIL---TLTYLGGERVVKNYNVMGVAKASLEASVKYL 174
Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           A +L ++GIR+N IS   I T      +S    G D + +L  +     L  T  +  ++
Sbjct: 175 ANDLGQHGIRVNAISAGPIRT------LSAKGVG-DFNSILREIEERAPLRRTTTQE-EV 226
Query: 257 ANAALYLASDDAKYVSGHNLVVDGGF 282
            + A++L SD A+ V+G N+ VD G+
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           ++TGA SG+G+A     +  G +V     ++Q  QQ    LG     I  D+    DV  
Sbjct: 7   IVTGAGSGLGRALTIGLVERGHQVSXXGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDV 66
Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI--KHSTRV 155
           A    +      +++ + AG     P     + +   +Q+ R+    +V+ I     T  
Sbjct: 67  AFAAAVEWGGLPELVLHCAGTGEFGP-----VGVYTAEQIRRVXESNLVSTILVAQQTVR 121
Query: 156 MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI 215
           +I  R G +    S    +G   +  Y  SK    G ++S+ AEL +  +R+  + P  I
Sbjct: 122 LIGERGGVLANVLSSAAQVGKANESLYCASKWGXRGFLESLRAELKDSPLRLVNLYPSGI 181
Query: 216 PTPF 219
            + F
Sbjct: 182 RSEF 185

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG----PNATFIACDVT 90
           + A++TG   GIG     +  SNG  VV+       G +  ++L      N  F   DVT
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72
Query: 91  KE-SDVSDAVDFTISKHNQLDIMYNNAGVA 119
              + +S   DF  +   +LDI+ NNAGVA
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVA 102

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT---------AKELGPNATF 84
           +K+ LITGA+SG G+ TA      G + V A  +  +G+           A++   +   
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHR-VYASXRDIVGRNASNVEAIAGFARDNDVDLRT 63
Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV  +  V  A+D  I +  ++D++ +NAG     P        E F ++  IN   
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEA--FTPEQFAELYDIN--- 118
Query: 145 VVAGIKHSTRVMIP---RRSGCILCTASVTGLLGGLAQH--TYSVSKSAIIGLVKSMAAE 199
            V   +   R  +P   R+   +L   S +   GG   +   Y  +K+A   +    A E
Sbjct: 119 -VLSTQRVNRAALPHXRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAXDAIAVQYARE 177
Query: 200 LCEYGIRINCISPFAI 215
           L  +GI  + I P A 
Sbjct: 178 LSRWGIETSIIVPGAF 193

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	297
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-124
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-107
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-98
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	4e-98
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	8e-94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-92
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-89
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-89
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-88
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-88
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-87
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-86
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-86
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-85
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-84
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-84
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	6e-83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-83
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-83
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	7e-83
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-82
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-81
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	7e-81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-79
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	9e-79
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-78
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-78
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-77
1xhl_A	297	Short-chain dehydrogenase/reductase family member	6e-77
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-77
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-76
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-76
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-76
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-76
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	6e-76
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	7e-76
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-76
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-75
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	6e-75
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-74
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-74
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-73
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-73
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	5e-73
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-73
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-73
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-72
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-71
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-71
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-70
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	7e-70
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	9e-70
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-69
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-69
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-68
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-68
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	5e-68
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-67
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-67
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-67
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-67
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-67
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-67
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-67
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	6e-67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	7e-67
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	8e-67
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-66
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-66
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-66
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-65
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-65
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-65
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-65
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-65
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	8e-65
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-65
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-64
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-64
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-64
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	9e-64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-63
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-63
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-63
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-62
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-62
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	9e-62
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-61
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-61
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-61
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-60
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	4e-60
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-60
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	7e-60
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-59
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-59
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-59
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-59
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-59
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-59
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-59
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	7e-59
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-58
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-58
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-58
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-58
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	6e-58
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-57
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-57
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-57
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	6e-57
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-56
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-56
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-56
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-56
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-56
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	8e-56
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	9e-56
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-55
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-55
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-55
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-55
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-55
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-55
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-54
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-54
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-54
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-54
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-54
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-53
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-52
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-52
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	5e-52
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	5e-52
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-51
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-51
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-51
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-51
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-51
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-50
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-50
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-49
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	5e-49
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	5e-49
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-48
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-48
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-42
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-47
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-47
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-44
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-41
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	9e-41
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-40
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-40
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-40
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-39
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-38
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	9e-38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-37
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-36
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-32
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-32
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-28
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-27
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-24
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-16
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	5e-16
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	6e-16
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-15
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-15
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-14
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-14
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-14
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	6e-14
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-13
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	5e-10
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	7e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-09
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	7e-09
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-07
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-06
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	7e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	4e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-04
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	5e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  354 bits (912), Expect = e-124
 Identities = 122/273 (44%), Positives = 170/273 (62%), Gaps = 9/273 (3%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN--AT 83
            + + +L++KVA+ITG A GIG+ TA  F+  GAKVVIADI    GQ+    +G     +
Sbjct: 8   DSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVIS 67

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
           F+ CDVTK+ DV + VD TI+KH +LDIM+ N GV   TP SI++   E F +VM INV 
Sbjct: 68  FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCE 202
           G     KH+ RVMIP + G I+ TAS++    G    H Y+ +K A++GL  S+  EL E
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGE 187

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           YGIR+NC+SP+ + +P     +     GVD+SR+ EL +    L+GT     D+A+A  Y
Sbjct: 188 YGIRVNCVSPYIVASP-----LLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY 242

Query: 263 LASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQ 295
           LA D++KYVSG NLV+DGG+T   N   P  ++
Sbjct: 243 LAGDESKYVSGLNLVIDGGYTR-TNPAFPTALK 274

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  312 bits (802), Expect = e-107
 Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 17/268 (6%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S +L  KVAL++G A G+G +     ++ GAKVV  DI  + G+  A EL   A ++  D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT+ +    AVD  ++    L ++ NNAG+      +I D  L  + +++ +N+ GV  G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLG 119

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           I+   + M     G I+  +S+ GL G +A H Y+ +K A+ GL KS A EL   GIR+N
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I P  + TP   + + +        R                EP +++N  +YLASD++
Sbjct: 180 SIHPGLVKTPMT-DWVPEDIFQTALGRA--------------AEPVEVSNLVVYLASDES 224

Query: 269 KYVSGHNLVVDGGFTSFKNLKLPAPVQV 296
            Y +G   VVDGG  +         V+V
Sbjct: 225 SYSTGAEFVVDGGTVAGLAHNDFGAVEV 252

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  289 bits (742), Expect = 1e-98
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 10/257 (3%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           + +L+ KVAL+TG ASG+G       +  GAKV  +DI    GQQ A ELG  + F+  D
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+ E+D +  +     +   L+++ NNAG+    P  +    LE F ++++IN   V  G
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE--YGIR 206
            +     M     G I+  ASV+  L       YS SK+A+  L ++ A    +  Y IR
Sbjct: 119 CQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P  I TP     M Q       S+ + L        G    P  IA   L+LASD
Sbjct: 178 VNSIHPDGIYTP-----MMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASD 232

Query: 267 DAKYVSGHNLVVDGGFT 283
           ++  +SG  L  D    
Sbjct: 233 ESSVMSGSELHADNSIL 249

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  288 bits (740), Expect = 4e-98
 Identities = 82/258 (31%), Positives = 123/258 (47%), Gaps = 5/258 (1%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFI 85
           S     L  KVA++TGA +GIG A A +    G  V+ ADI        A ++G  A   
Sbjct: 21  SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAAC 80

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV+ E  +   VD  ++    +D +  NAGV      S++D  +E FD+V+ IN+RG 
Sbjct: 81  RVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV--HLASLIDTTVEDFDRVIAINLRGA 138

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               KH+   MI R  G I+  +S+ G +       Y +SK+ II L +  AAEL   GI
Sbjct: 139 WLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R N + P  + TP     M+     + A     ++     L+G    P ++A   ++L S
Sbjct: 199 RSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI---ARLQGRMAAPEEMAGIVVFLLS 255

Query: 266 DDAKYVSGHNLVVDGGFT 283
           DDA  ++G   + DGG  
Sbjct: 256 DDASMITGTTQIADGGTI 273

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  281 bits (722), Expect = 1e-95
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 19/262 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K  +ITG A G+G   A + ++ GA+VV+AD+  + G  TA+ELG  A +   DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E D    V +   +   +D + NNAG++  T   +   ++E F +V+ IN+ GV  G+K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKT 120

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M     G I+  +S  GL+G     +Y  SK  + GL K  A EL    IR+N + 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 212 PFAIPTPFVMEEMSQIYAGVDAS----RLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P    TP   E   +   G   +    R+           G   EP +IA A + L SD 
Sbjct: 181 PGMTYTPMTAETGIRQGEGNYPNTPMGRV-----------GN--EPGEIAGAVVKLLSDT 227

Query: 268 AKYVSGHNLVVDGGFTSFKNLK 289
           + YV+G  L VDGG+T+   +K
Sbjct: 228 SSYVTGAELAVDGGWTTGPTVK 249

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  279 bits (717), Expect = 1e-94
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 6/264 (2%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           L  +S  L ++V ++TG  SGIG+ATA  F  NGA VV+AD+      + A E+G  A  
Sbjct: 18  LYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG 77

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV+   D    V+ T +K  ++D++ NNAG        +V +  E +D++M +NV+G
Sbjct: 78  VRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGN--VVTIPEETWDRIMSVNVKG 135

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           +    K+   VM     G I+ T S T       +  Y  SK AI  L ++MA +  + G
Sbjct: 136 IFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEG 195

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+N ++P  I +P+  +  ++                   +        +IA A L+LA
Sbjct: 196 IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRM----GTAEEIAEAMLFLA 251

Query: 265 SDDAKYVSGHNLVVDGGFTSFKNL 288
           SD +++ +G  L VDGG +   +L
Sbjct: 252 SDRSRFATGSILTVDGGSSIGNHL 275

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  277 bits (711), Expect = 8e-94
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 11/262 (4%)

Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNAT 83
           G  + + +LE KVA+ITGA  GIG  T+      GA+VV+AD+        A  +G  A 
Sbjct: 1   GPGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAV 60

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
               D+T E  V   +DFTI    +LDI+ NNA  +      +  + ++V+D    +N R
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G +   K++   +I    G I+  +S T          Y+ +K+AI  L + +A +   +
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180

Query: 204 GIRINCISPFAIPTPFVMEEMSQ-IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           G+R N I+P  + TP +   + Q I        L           G   EP++IA    +
Sbjct: 181 GVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA----------GRIGEPHEIAELVCF 230

Query: 263 LASDDAKYVSGHNLVVDGGFTS 284
           LASD A +++G  +  D G  +
Sbjct: 231 LASDRAAFITGQVIAADSGLLA 252

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  273 bits (700), Expect = 4e-92
 Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 8/263 (3%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GP 80
           S+ + +  ++V LITG  SG+G+ATA +  + GAK+ + D+  +  + +   +       
Sbjct: 5   SSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA 64

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
                  DV+ E+ V   V  T  +  ++D  +NNAG+  K            FD+V+ I
Sbjct: 65  EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSI 123

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+RGV  G++   ++M  + SG ++ TASV G+ G   Q  Y+ +K  ++GL ++ A E 
Sbjct: 124 NLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEY 183

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
             YGIRIN I+P AI TP V   M Q+          E +         + E  +IA   
Sbjct: 184 GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS--KRYGEAPEIAAVV 241

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
            +L SDDA YV+   + +DGG +
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQS 264

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  272 bits (698), Expect = 6e-92
 Identities = 85/259 (32%), Positives = 132/259 (50%), Gaps = 11/259 (4%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S  LE KVALITGA SG G+  A +F   GAKVVI D      ++ A E+G  A  +A D
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAAD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++KE+DV  AV+  +SK  ++DI+ NNAG+    P++   +  E FD+++ +NVRGV   
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIG-HKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 149 IKHSTRVMIPRRSG----CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                       +      IL  AS            Y+ +K  ++ + K++A EL    
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAK 182

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+  ++P A  TP     +   + G D+  + +    +  + G   +P+D+A AA +L 
Sbjct: 183 IRVVALNPVAGETP-----LLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLC 236

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           S  A  ++G  L VDGG +
Sbjct: 237 SPQASMITGVALDVDGGRS 255

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  265 bits (681), Expect = 4e-89
 Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 21/262 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           +LE K+A++TGA+SGIG+A A  F   GAKVV+         +   E+   G  A  +A 
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAG 64

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV  E+     V+  + +   LD  +NNAG        I  L++E + + +  N+     
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFL 123

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIR 206
             K+    +     G +  T+S  G   G A    Y+ SK+ +IGLV+++A EL   GIR
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-----CEPNDIANAAL 261
           +N + P    TP     +                     +EG H       P +IA AAL
Sbjct: 184 VNALLPGGTDTPANFANLPGAAPETRGF-----------VEGLHALKRIARPEEIAEAAL 232

Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           YLASD A +V+G  L+ DGG +
Sbjct: 233 YLASDGASFVTGAALLADGGAS 254

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  264 bits (678), Expect = 5e-89
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA 86
           + L+ KV ++TGA SGIG+A A KF  N + VV  ++      Q  +EL   G     + 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+K+ DV + V  T   ++++D++ NNAG+       + +++ E++++V+ +N+    
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIM-DGVTPVAEVSDELWERVLAVNLYSAF 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              +    +M+ +  G I+ TAS+ G+ GG A   Y+V+K  +IGL +S+AA   + GIR
Sbjct: 122 YSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
              + P  + T      +    +      +  L     +      EP DIAN  ++LASD
Sbjct: 182 AVAVLPGTVKTN-----IGLGSSKPSELGMRTLTKLMSLS-SRLAEPEDIANVIVFLASD 235

Query: 267 DAKYVSGHNLVVDGGFT 283
           +A +V+G  +VVDGG T
Sbjct: 236 EASFVNGDAVVVDGGLT 252

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  264 bits (676), Expect = 2e-88
 Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 8/257 (3%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
               +   KV ++TG   GIG      F+++GA+VVI D     G+   +EL   A FI 
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFIL 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDVT+E DV   V  TI +  +LD + NNAG     P+   + + + F Q++ +N+ G  
Sbjct: 61  CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTY 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              K +   +  +  G ++  +S+ G +G      Y  +K A+  + K++A +   YG+R
Sbjct: 120 TLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 178

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +NCISP  I TP   E  + +     + R   L    G +     +P ++  AA++LAS 
Sbjct: 179 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRM----GQPAEVGAAAVFLAS- 233

Query: 267 DAKYVSGHNLVVDGGFT 283
           +A + +G  L+V GG  
Sbjct: 234 EANFCTGIELLVTGGAE 250

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  262 bits (673), Expect = 4e-88
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 10/262 (3%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI 85
           S+K   KV L+TGA   IG ATA +    G  + + D+  +  ++    +   G  A   
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSY 61

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            CDVT E  V   VD  +    ++D ++NNAG        + D   + F +V+ INV G 
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-GAFAPVQDYPSDDFARVLTINVTGA 120

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              +K  +R MI +  G I+ TAS+ G+ G      Y  SK AII L ++ A +L  Y I
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG-VLEGTH-----CEPNDIANA 259
           R+N ISP  +   F+ E   ++ A V +             + G+       + N+I   
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV 240

Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
             +L  DD+ +++G NL + GG
Sbjct: 241 VAFLLGDDSSFMTGVNLPIAGG 262

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  260 bits (666), Expect = 7e-87
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 13/264 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
            +  +KVA++TG +SGIG A     +  GAKVV   +  +     +            DV
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-------HFKIDV 62

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T E +V +AV+ T  K+ ++DI+ NNAG+   +P  +     E++ +++ +NV G     
Sbjct: 63  TNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSP--LHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           K++  VM+    G I+  ASV           Y  SK A++GL +S+A +     IR N 
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYLASDD 267
           + P  I TP V  + +++  G D + +   +   G     G    P ++A    +LASD 
Sbjct: 180 VCPGTIMTPMV-IKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238

Query: 268 AKYVSGHNLVVDGGFTSFKNLKLP 291
           + +++G  L VDGG  S   +  P
Sbjct: 239 SSFITGACLTVDGGLLSKLPISTP 262

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  258 bits (661), Expect = 2e-86
 Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 13/254 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT 90
           +VA++TGA+SG G A A +F++ G +V   D+  +  ++TA+            +  DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-IVDLNLEVFDQVMRINVRGVVAGI 149
            E DV+ A+  T+ +   +D++ NNAG+   +    +    +E FD+VM +NVRG+  G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           +     M+ + +G I+  ASV  L+    +  Y+ SK A++ L KS+A +    GIR N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           + P  I TP     +       D   L + V +             +A+A ++LA +DA 
Sbjct: 183 VCPGMIETPMTQWRL-------DQPELRDQVLARIPQ-KEIGTAAQVADAVMFLAGEDAT 234

Query: 270 YVSGHNLVVDGGFT 283
           YV+G  LV+DG +T
Sbjct: 235 YVNGAALVMDGAYT 248

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  257 bits (660), Expect = 2e-86
 Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 26/266 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIA 86
           S +L+ KVA+ITG   GIG A A KF+  GAKV+I      +G++ AK +G      F  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D + E   +   D T      +  + NNAG+A    +S+ +     + +++ +N+ GV 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 147 AGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE--Y 203
            G +   + M  +  G  I+  +S+ G +G  +   Y+ SK A+  + KS A +     Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 204 GIRINCISPFAIPTPFV-----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
            +R+N + P  I TP V      EE            +               EPNDIA 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHI--------------GEPNDIAY 224

Query: 259 AALYLASDDAKYVSGHNLVVDGGFTS 284
             +YLAS+++K+ +G   VVDGG+T+
Sbjct: 225 ICVYLASNESKFATGSEFVVDGGYTA 250

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  256 bits (656), Expect = 2e-85
 Identities = 74/255 (29%), Positives = 130/255 (50%), Gaps = 7/255 (2%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           +++L  K+A+ITGA SGIG A A +F++ GA+V I   +  +      E+G  A  I  D
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD 83

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
               +++    +   ++  ++D+++ NAG     P  + ++  E +D     NV+GV+  
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLP--LGEVTEEQYDDTFDRNVKGVLFT 141

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           ++ +  ++   R   ++ T S  G  G  A   Y+ SK+A+    ++   +L + GIRIN
Sbjct: 142 VQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRIN 199

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            +SP    T  ++E   +    V    LL  + +   + G      ++A AAL+LASDD+
Sbjct: 200 TLSPGPTETTGLVELAGK--DPVQQQGLLNALAAQVPM-GRVGRAEEVAAAALFLASDDS 256

Query: 269 KYVSGHNLVVDGGFT 283
            +V+G  L VDGG  
Sbjct: 257 SFVTGAELFVDGGSA 271

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  256 bits (656), Expect = 3e-85
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
                VALITGA SGIG+ATA    ++G  V          ++ A E+   G  A  +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+ E  + +AV   + K   LDI+  NAG+       I DL    +D+ + +N+RG   
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGIN-GVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGL--LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
            +  +   +  R  G I+  +S+ G           Y+ +K+A + +V+ +A EL ++ I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N + P AI T    +     +    A  +        + +G      D+A    +L S
Sbjct: 204 RVNAVCPGAIETNIS-DNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS 262

Query: 266 DDAKYVSGHNLVVDGGFT 283
           + A++V+G  + +DGG  
Sbjct: 263 ERARHVTGSPVWIDGGQG 280

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  253 bits (650), Expect = 1e-84
 Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
               K  L+TG A GIG+A A  F   GA V + D++ + G++ A+ +G    F   D+ 
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDLE 59

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E +    V+       ++D++ NNA +A   P S + + L  + +V+ +N+   +    
Sbjct: 60  DERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSA 117

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            + R M     G I+  ASV GL        Y+ SK  ++ L +S+A +L    IR+N +
Sbjct: 118 LAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV 177

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P AI T  V+E ++         R  E +++   L     +P ++A A L+LAS+ A +
Sbjct: 178 APGAIATEAVLEAIALSPDPERTRRDWEDLHALRRL----GKPEEVAEAVLFLASEKASF 233

Query: 271 VSGHNLVVDGGFT 283
           ++G  L VDGG T
Sbjct: 234 ITGAILPVDGGMT 246

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  253 bits (650), Expect = 1e-84
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 6/257 (2%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           ++LE K ALITG+A GIG+A A  ++  GA V IADI  +  +Q A E+GP A  +  DV
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV 63

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T++  +  A+  T+     LDI+ NNA +    P  IV++  E ++++  INV G +  +
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFDLAP--IVEITRESYEKLFAINVAGTLFTL 121

Query: 150 KHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + + R MI + R G I+  AS  G  G      Y  +K+A+I L +S   +L ++ I +N
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAALYLASD 266
            I+P  +      + +  ++A  +     E        V  G      D+   A++LAS 
Sbjct: 182 AIAPGVVDGEH-WDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA 240

Query: 267 DAKYVSGHNLVVDGGFT 283
           ++ Y+      VDGG  
Sbjct: 241 ESDYIVSQTYNVDGGNW 257

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  250 bits (641), Expect = 6e-83
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 6/257 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL  +VALITG ASG+G+A   +F++ GA+V + D   +  ++     G NA  +  DV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVRGVVA 147
              D   A +  ++   ++D +  NAG+   +        D     FD +  +NV+G + 
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIH 121

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +K     ++  R G ++ T S  G         Y+ +K A++GLV+ MA EL    +R+
Sbjct: 122 AVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRV 179

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  + T         +     +S  L  +  + +  G      +   A ++ A+  
Sbjct: 180 NGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG 239

Query: 268 A-KYVSGHNLVVDGGFT 283
                +G  L  DGG  
Sbjct: 240 DSLPATGALLNYDGGMG 256

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  249 bits (638), Expect = 6e-83
 Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 25/266 (9%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNA 82
           ++++ +L+ K A+ITGA +GIGK  A  F + GA VV++DI          E+   G  A
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA 62

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
               CD+T E ++S   DF ISK  ++DI+ NNAG          D+ +  F +   +NV
Sbjct: 63  FACRCDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYELNV 119

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                  +     M     G IL   S+      +   +Y+ SK+A   LV++MA +L E
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179

Query: 203 YGIRINCISPFAIPTPFVMEEMS-----QIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
             IR+N I+P AI T  +   ++     ++       RL               +P DIA
Sbjct: 180 KNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL--------------GQPQDIA 225

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFT 283
           NAAL+L S  A +VSG  L V GG  
Sbjct: 226 NAALFLCSPAASWVSGQILTVSGGGV 251

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  250 bits (640), Expect = 6e-83
 Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 19/268 (7%)

Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----- 78
           G  +     +++  L+TG  SGIGK  AA  ++ GA V+I            +EL     
Sbjct: 1   GPGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA 60

Query: 79  -GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQV 137
            G    +   D+T E + + AVD   + H +L  + + AG + +    I  ++ E + + 
Sbjct: 61  NGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-ENIGPITQVDSEAWRRT 119

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA 197
           + +NV G +  +KH+ R M+    G  +  +S+           Y V+KSA+  L++  A
Sbjct: 120 VDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAA 179

Query: 198 AELCEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
            EL    +R+N I P  I T  V  + E +++ +       L              E  D
Sbjct: 180 DELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL----------PRQGEVED 229

Query: 256 IANAALYLASDDAKYVSGHNLVVDGGFT 283
           +AN A++L SD A +V+G  + VDGG  
Sbjct: 230 VANMAMFLLSDAASFVTGQVINVDGGQM 257

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  248 bits (637), Expect = 7e-83
 Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 13/254 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ KV ++T AA GIG+A A  F   GAKV+  DI     Q+  K  G        DVT
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVT 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           K+  +    +    +  +LD+++N AG       +++D   + +D  M +NVR +   IK
Sbjct: 61  KKKQIDQFAN----EVERLDVLFNVAGFV--HHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINC 209
                M+ ++SG I+  +SV   + G+     YS +K+A+IGL KS+AA+  + GIR NC
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           + P  + TP + E +       +A         TG          +IA   +YLASD++ 
Sbjct: 175 VCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRF----ATAEEIAMLCVYLASDESA 230

Query: 270 YVSGHNLVVDGGFT 283
           YV+G+ +++DGG++
Sbjct: 231 YVTGNPVIIDGGWS 244

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  247 bits (634), Expect = 3e-82
 Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L +KV ++TGA+ GIG+A A +F+  G+KV+   I                  I CDVT 
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH--------DPGEAKYDHIECDVTN 57

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  ++D    ++  + ++ NNAG+       I  +++  + +++ +N+ G     K 
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIESYGK--IESMSMGEWRRIIDVNLFGYYYASKF 115

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           +   MI  R   I+  +SV   +       Y  SK A+IGL KS+A +     +R N + 
Sbjct: 116 AIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVC 174

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIANAALYLASDDAK 269
           P  I TP V  + +++  G D  R+ + +   G         +P ++A+A  +LAS +A 
Sbjct: 175 PATIDTPLV-RKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREAS 233

Query: 270 YVSGHNLVVDGGFTSFKNLKLP 291
           +++G  L VDGG +    +  P
Sbjct: 234 FITGTCLYVDGGLSIRAPISTP 255

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  246 bits (631), Expect = 1e-81
 Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 12/263 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +  EKVA+ITG+++GIG+ATA  F   GAKV I     +  ++T +++        N   
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINV 142
           +  DVT ++   + +  T+ K  +LDI+ NNAG A    +S      ++E +D  + +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELC 201
           R V+A  K +   +     G I+  +S+   L        YS++K+AI    ++ A +L 
Sbjct: 123 RSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           ++GIR+N ISP  + T F                 +  +       G   +P DIA    
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAEVIA 240

Query: 262 YLASDD-AKYVSGHNLVVDGGFT 283
           +LA    + Y+ GH LVVDGG +
Sbjct: 241 FLADRKTSSYIIGHQLVVDGGSS 263

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  244 bits (625), Expect = 7e-81
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNAT 83
              + LE KVAL+T +  GIG A A +   +GA VV++  + +   +T   L   G + T
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
              C V K  D    V   ++ H  +DI+ +NA V      +I+D   EV+D+++ +NV+
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVN-PFFGNIIDATEEVWDKILHVNVK 125

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
             V   K     M  R  G +L  +SV           Y+VSK+A++GL K++A EL   
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185

Query: 204 GIRINCISPFAIPTPF--VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
            IR+NC++P  I T F  V+         +  S  +               P D A    
Sbjct: 186 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI----------RRLGNPEDCAGIVS 235

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +L S+DA Y++G  +VV GG  S
Sbjct: 236 FLCSEDASYITGETVVVGGGTAS 258

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  240 bits (614), Expect = 3e-79
 Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 8/263 (3%)

Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP 80
           G  +    L +KV +I+G    +G   A +    GA +V+A    +  +  AK++   G 
Sbjct: 1   GPGSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR 60

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
            A  +  D+T ++ V+  VD T+  + ++D++ NNA       +   +   E     + +
Sbjct: 61  RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIEL 119

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
            V G +  I+  T  +     G ++   S+           Y ++KSA++ + +++A EL
Sbjct: 120 TVFGALRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATEL 178

Query: 201 CEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
            E GIR+N + P  I    +    E      G     +     +   L       +++A+
Sbjct: 179 GEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDEVAS 237

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           A L++ASD A  ++G  L V+ G
Sbjct: 238 AILFMASDLASGITGQALDVNCG 260

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  239 bits (613), Expect = 9e-79
 Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 26/278 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----------------QQT 74
           ++E KVA +TGAA G G++ A +    GA ++  DI   +                  +T
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 75  A---KELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL 131
           A   K           DV     +  AVD  + +  +LDI+  NAG+      ++   + 
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI-GNGGDTLDKTSE 126

Query: 132 EVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAII 190
           E + +++ IN+ GV   +K     MI   R G I+ T+SV GL        Y  +K  ++
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV 186

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASR-----LLELVYSTGV 245
           GL+++   EL ++ IR+N + P  + TP +  E +      D        +  +      
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT 246

Query: 246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
           L     EP DI+NA L+ ASD+A+Y++G  L +D G  
Sbjct: 247 LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  238 bits (611), Expect = 1e-78
 Identities = 69/260 (26%), Positives = 133/260 (51%), Gaps = 14/260 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           +L+ +VA++TG A  IG A        GA+V+IAD+   +  +  ++L   G + + +  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT    V +AV     +  ++DI+   AG+   +     D+    + + + IN+ G+  
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGIC-ISEVKAEDMTDGQWLKQVDINLNGMFR 128

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLA--QHTYSVSKSAIIGLVKSMAAELCEYGI 205
             +   R+M+ ++ G I+   S++GL+      Q  Y+ SK+ +   ++S+AAE   +GI
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R N ++P  I T      +++   G++   L +   +   + G   +P+++A+   +LAS
Sbjct: 189 RANAVAPTYIETT-----LTR--FGMEKPELYDAWIAGTPM-GRVGQPDEVASVVQFLAS 240

Query: 266 DDAKYVSGHNLVVDGGFTSF 285
           D A  ++G  + VD GFT +
Sbjct: 241 DAASLMTGAIVNVDAGFTVW 260

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  238 bits (610), Expect = 2e-78
 Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 19/279 (6%)

Query: 24  GLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------ 71
           G  + + KLE +VA ITGAA G G+A A +  + GA ++  DI  +L             
Sbjct: 1   GPGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDD 60

Query: 72  -QQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIV 127
             +T +              D      +   VD  ++   +LDI+  NAGVA   P++  
Sbjct: 61  LSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA--APQAWD 118

Query: 128 DLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSK 186
           D+  E F  VM INV G    +      +I   R G I+  +S  G+        Y+ SK
Sbjct: 119 DITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASK 178

Query: 187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL 246
            A+ GL ++ AAEL ++ IR+N + P  + TP    +M         +        T  L
Sbjct: 179 HAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL 238

Query: 247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF 285
                EP DIA+   +LASD+++ V+   + VD G T +
Sbjct: 239 PDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY 277

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  235 bits (601), Expect = 4e-77
 Identities = 75/253 (29%), Positives = 111/253 (43%), Gaps = 13/253 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
             E KVAL+TGAA GIG A      + GA+V +AD         A         +  D+ 
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADR--------AVAGIAADLHLPGDLR 76

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           + +          +   +LDI+ NNAGV  +    I +     +   + +NV       +
Sbjct: 77  EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGR--ITETTDADWSLSLGVNVEAPFRICR 134

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +  +M     G I+  AS  GL  G     Y ++K+A+  L + M  +    GIRIN +
Sbjct: 135 AAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAV 194

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
            P  + TP  M        G D  R +  +  T  L G   EP DIA+  L+LASD A+Y
Sbjct: 195 CPNEVNTP--MLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAARY 251

Query: 271 VSGHNLVVDGGFT 283
           + G  + V+GG  
Sbjct: 252 LCGSLVEVNGGKA 264

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  235 bits (602), Expect = 6e-77
 Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 10/261 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +   K  +ITG+++GIG++ A  F   GA+V I        ++T +++            
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT+ S   D ++ T++K  ++DI+ NNAG       +  D  +E++ +  ++N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEY 203
           V+   + +   +I +  G I+  +S+       + +  Y+ +K+A+    +  A +L ++
Sbjct: 143 VIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G+R+N +SP A+ T F+        A       +        + G   +P +IAN  ++L
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIVFL 260

Query: 264 ASDD-AKYVSGHNLVVDGGFT 283
           A  + + Y+ G ++V DGG T
Sbjct: 261 ADRNLSSYIIGQSIVADGGST 281

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  233 bits (597), Expect = 7e-77
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKELGPNATFIACDVTKES 93
              L+TG + GIGKA     + N    VI  DIQ     +  K       FI  D+TK+ 
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-------FIKADLTKQQ 57

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           D+++ +D    K+   D ++ NAG+      SI D+++E   +V+ +NV   +  IK   
Sbjct: 58  DITNVLDII--KNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
             +  +    I+   S    +       Y++SK AI  + KS+A +L +Y IR+N + P 
Sbjct: 114 NNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG 171

Query: 214 AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH-----CEPNDIANAALYLASDDA 268
            + T      + Q YA        E        E         +P +IA   ++L SD +
Sbjct: 172 TVDTDLY-RNLIQKYANNVGISFDEAQKQ---EEKEFPLNRIAQPQEIAELVIFLLSDKS 227

Query: 269 KYVSGHNLVVDGGFT 283
           K+++G  + +DGG+T
Sbjct: 228 KFMTGGLIPIDGGYT 242

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  233 bits (596), Expect = 3e-76
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 12/263 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +   K  +ITG+++GIG+ TA  F   GA V I     +  ++T + +            
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRINV 142
           +  DVT E      ++ T+ +  ++D++ NNAG A       +  D  ++++ + +++N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTAS-VTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           + V+   K     ++    G I+  +S V G         Y+++K+A+    +S A +L 
Sbjct: 123 QAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           ++GIR+N +SP  + T F         A       +        + G   +P  IAN  L
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANIIL 240

Query: 262 YLASDDA-KYVSGHNLVVDGGFT 283
           +LA  +   Y+ G ++V DGG +
Sbjct: 241 FLADRNLSFYILGQSIVADGGTS 263

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  233 bits (596), Expect = 4e-76
 Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 20/277 (7%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------------Q 72
           + ++  L+ +VA ITGAA G G++ A +  + GA ++  DI   +               
Sbjct: 7   AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66

Query: 73  QTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDL 129
           +TA+     G  A     DV  ++ + + V   + +  +LD++  NAGV   +   + +L
Sbjct: 67  ETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL--SWGRVWEL 124

Query: 130 NLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSA 188
             E +D V+ +N+ G    ++ +   MI     G I+  +S  GL        YS SK  
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHG 184

Query: 189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG 248
           +  L  ++A EL EYGIR+N I P+++ TP +  E          S +        V   
Sbjct: 185 LTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP-PMPVQPN 243

Query: 249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF 285
                +++A+   +LA D +  ++G  + VD G   +
Sbjct: 244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALKY 280

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  232 bits (594), Expect = 4e-76
 Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 8/261 (3%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
                L  + A++TG + GIG A A      GA V IAD+     Q     L      + 
Sbjct: 5   AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVTK + V  A+   I      D++  NAGV+   P   VD+  E +D    +N RGV 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP--AVDITDEEWDFNFDVNARGVF 122

Query: 147 AGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              + + R  +   + G I+ TAS+   +G      YS SK A+ G  +++A E+    I
Sbjct: 123 LANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV---YSTGVLEGTHCEPNDIANAALY 262
           R+NC+ P  + T   M+E   I+         E V   Y +    G   EP D+A+  ++
Sbjct: 183 RVNCVCPGFVKTA--MQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF 240

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           LASD A++++G  + V GG  
Sbjct: 241 LASDAARFMTGQGINVTGGVR 261

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  232 bits (594), Expect = 4e-76
 Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 24/265 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNAT 83
           +  +  KVAL+TGAA GIG+A A   +  GAKV + D   + G Q    L          
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
           FI CDV  +  + D     +    +LDI+ NNAGV           N + +++ ++IN+ 
Sbjct: 62  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLV 111

Query: 144 GVVAGIKHSTRVMIPRRSG---CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMA--A 198
            V++G       M  +  G    I+  +S+ GL+    Q  Y  SK  I+G  +S A  A
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171

Query: 199 ELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
            L   G+R+N I P  + T  +     +   G        +            +P  IAN
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY--YGILDPPLIAN 229

Query: 259 AALYLASDDAKYVSGHNLVVDGGFT 283
             + L  DDA  ++G  + +     
Sbjct: 230 GLITLIEDDA--LNGAIMKITTSKG 252

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  231 bits (592), Expect = 6e-76
 Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 9/253 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
             + K A++ G   G+G AT  + +  GA+V++         +  +E GP    +  D+ 
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA 64

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             ++++            +D+++ NAGV+   P     ++   +D+   +N +G    ++
Sbjct: 65  DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP--FDQVSEASYDRQFAVNTKGAFFTVQ 122

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             T ++  R  G I+ T+SV    G      YS SK+A++     +AAEL   GIR+N +
Sbjct: 123 RLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSV 180

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           SP  I TP   + ++ I     A         T +    +   +++A A L+LA  +A +
Sbjct: 181 SPGFIDTP--TKGVAGITEAERAEFKTLGDNITPM--KRNGTADEVARAVLFLAF-EATF 235

Query: 271 VSGHNLVVDGGFT 283
            +G  L VDGG  
Sbjct: 236 TTGAKLAVDGGLG 248

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  232 bits (595), Expect = 7e-76
 Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 22/283 (7%)

Query: 22  SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----------- 70
           ++G  + + K+E KVA ITGAA G G++ A      GA ++  D+  QL           
Sbjct: 16  TQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPD 75

Query: 71  -GQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSI 126
              +T ++   LG        DV     +  AVD  +++  +LDI+  NA +       +
Sbjct: 76  DLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL-ASEGTRL 134

Query: 127 VDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVS 185
             ++ + +  ++ +N+ G     + +   ++  +R G I+ T+S+ GL G      Y  S
Sbjct: 135 NRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIAS 194

Query: 186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL-----ELV 240
           K  + GL+++MA EL    IR+N + P ++ TP ++ E +      D             
Sbjct: 195 KHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS 254

Query: 241 YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
               VL   + EP DI+NA L+L SDDA+Y++G +L VDGG  
Sbjct: 255 RQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  231 bits (592), Expect = 7e-76
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 25/261 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L + VA++TGAA+GIG+A A  F   GA VV+ D++ +  +  A  +   G  A  + C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +VT E      +   + +  ++ ++ NNAG          D+ +  F+   ++N+  +  
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGG---GGPKPFDMPMSDFEWAFKLNLFSLFR 125

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +   M     G IL  +S+ G    +   +Y  SK+A+  L +++A ++   GIR+
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRV 185

Query: 208 NCISPFAIPTPFVMEEMS-----QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           N I+P AI T  +   ++      +       RL       G       E  DIANAAL+
Sbjct: 186 NAIAPGAIKTDALATVLTPEIERAMLKHTPLGRL-------G-------EAQDIANAALF 231

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           L S  A ++SG  L V GG  
Sbjct: 232 LCSPAAAWISGQVLTVSGGGV 252

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  230 bits (588), Expect = 2e-75
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 26/264 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI 85
           S + E KV ++TG+  GIG+A A      GA VV+ADI  +  +  AK++   G  A  +
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISV 63

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT-PRSIVDLNLEVFDQVMRINVRG 144
           A DV+         D T+++   +D + NNA +        ++ ++ E + + M +N+ G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
            +   +   + M  R  G I+  +S    L     + Y ++K  I GL + ++ EL    
Sbjct: 124 ALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---SNYYGLAKVGINGLTQQLSRELGGRN 180

Query: 205 IRINCISPFAIPTPFVMEEMS-----QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           IRIN I+P  I T              I  G+  SR+                P+D+   
Sbjct: 181 IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRM--------------GTPDDLVGM 226

Query: 260 ALYLASDDAKYVSGHNLVVDGGFT 283
            L+L SD+A +++G    VDGG  
Sbjct: 227 CLFLLSDEASWITGQIFNVDGGQI 250

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  228 bits (585), Expect = 6e-75
 Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 9/256 (3%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
           +KVAL+TGA  GIGKA A + + +G  V IAD      +  A E+   G +A  +  DV+
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V  AV+         D++ NNAGVA  TP  I  +  E+ D+V  INV+GV+ GI+
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP--IESITPEIVDKVYNINVKGVIWGIQ 119

Query: 151 HSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
            +          G I+   S  G +G      YS SK A+ GL ++ A +L   GI +N 
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 179

Query: 210 ISPFAIPTP--FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
             P  + TP    ++      AG          ++  +  G   EP D+A    YLAS D
Sbjct: 180 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAE-FAKRITLGRLSEPEDVAACVSYLASPD 238

Query: 268 AKYVSGHNLVVDGGFT 283
           + Y++G +L++DGG  
Sbjct: 239 SDYMTGQSLLIDGGMV 254

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  227 bits (582), Expect = 2e-74
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L+ K ALITGA  GIG   A  F + GA++V++           + L    G +   +A 
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+ +    ++           LD++ NNAG++   P  +VD + ++FD  + +N+R    
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP--VVDTDPQLFDATIAVNLRAPAL 135

Query: 148 GIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                 + M+     G I+  AS   L      + Y  SK+ ++   K +A EL  +GIR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 207 INCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            N + P  + T           + + + A +   R                 P+++++A 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRF--------------AVPHEVSDAV 241

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
           ++LASD A  ++G ++ VDGG+T
Sbjct: 242 VWLASDAASMINGVDIPVDGGYT 264

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  228 bits (583), Expect = 2e-74
 Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 30/267 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+   AL+TG + GIG A   +    GA+V       +   +  +     G N     CD
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +   ++    +       + +L+I+ NNAGV         D   + ++ +M  N      
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYH 136

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +  ++   ++G ++  +S+ G     +   YS SK AI  + KS+A E  +  IR+
Sbjct: 137 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 196

Query: 208 NCISPFAIPTPFV----------MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           N ++P  I TP V           EE+          R                +P +++
Sbjct: 197 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRA--------------GKPQEVS 242

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTS 284
               +L    A Y++G  +  DGGFT+
Sbjct: 243 ALIAFLCFPAASYITGQIIWADGGFTA 269

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  225 bits (576), Expect = 1e-73
 Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 26/258 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L +++ L+TGA+ GIG+  A  +   GA V++     +  +Q A  +    G    +   
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 88  D--VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           D       +           + +LD + +NAG+       + + N +V+  VM++NV   
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL-GDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               +    +++   +G ++ T+S  G  G      Y+ SK A  G+++ +A E  +  +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRL 187

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+NCI+P    T   M   +  +   D  +L                P DI    L+L  
Sbjct: 188 RVNCINPGGTRTA--M--RASAFPTEDPQKL--------------KTPADIMPLYLWLMG 229

Query: 266 DDAKYVSGHNLVVDGGFT 283
           DD++  +G       G  
Sbjct: 230 DDSRRKTGMTFDAQPGRK 247

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  225 bits (575), Expect = 4e-73
 Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 25/262 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L  K ALITGA++GIGK  A  +   GA+V +A       Q  A E+   G  A  I C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT+   V   +D    +   +DI   NAG+       ++D+ LE F ++   NV GV  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTGVFL 146

Query: 148 GIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCEYG 204
             + + R M+ +   G I+ TAS++G +  + Q    Y  SK+A++ L K+MA EL  + 
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206

Query: 205 IRINCISPFAIPTP---FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           IR+N +SP  I T     + +  +     +   R+                P ++    L
Sbjct: 207 IRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRM--------------GRPEELTGLYL 252

Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           YLAS  + Y++G ++V+DGG+T
Sbjct: 253 YLASAASSYMTGSDIVIDGGYT 274

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  224 bits (573), Expect = 5e-73
 Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 31  KLEEKVALITGAA-SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFI 85
            L+ KV L+T AA +GIG  TA + +  GA VVI+D   +   +T  +L          +
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            CDVT    V   +  T+ K  +LD++ NNAG+  +TP  +VD+  E +D+V+ + +  V
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP--VVDMTDEEWDRVLNVTLTSV 136

Query: 146 VAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           +   + + R        G I+  ASV G     +Q  Y+ +K+ ++ L +  A E  E+G
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFG 196

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +RIN +SP      F+            +S LL+ + S     G   EP ++A    +LA
Sbjct: 197 VRINAVSPSIARHKFL--------EKTSSSELLDRLASDEAF-GRAAEPWEVAATIAFLA 247

Query: 265 SDDAKYVSGHNLVVDGG 281
           SD + Y++G  + V   
Sbjct: 248 SDYSSYMTGEVVSVSSQ 264

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  224 bits (573), Expect = 5e-73
 Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIA 86
           L E VA++TG +SGIG AT    +  GA V       +  +     L     G       
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV     V    +          I+ NNAG    +     +   E + + +++    V+
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVST--FAETTDEAWSEELQLKFFSVI 123

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++     +  R    I+C  S+            S +++ +  LV+SMA E    G+R
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVR 183

Query: 207 INCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +N I    + +       E  +      A    +L  +  +  G   +P + A A L+LA
Sbjct: 184 VNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA 243

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           S  + Y +G ++ V GG +
Sbjct: 244 SPLSAYTTGSHIDVSGGLS 262

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  224 bits (574), Expect = 7e-73
 Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 24/262 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L+ KVA +TG++ GIG A A  +   GA V I    H   ++        G ++    C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +++    V + +         +D+   NAGV       I   N + +++++ +++ GV  
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLG--GLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
              +  ++      G ++ T+S++G +      Q  Y+ +K+A   L KS+A E   +  
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA- 209

Query: 206 RINCISPFAIPTP---FVMEEMSQ-IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           R+N ISP  I T    F  ++M    +      R                   ++    L
Sbjct: 210 RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGRE--------------GLTQELVGGYL 255

Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           YLAS+ + + +G ++V+DGG+T
Sbjct: 256 YLASNASTFTTGSDVVIDGGYT 277

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  223 bits (570), Expect = 1e-72
 Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 11/256 (4%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIAC 87
           +++L++K+A+ITG A+GIG+A A +F   GA + IAD+      +   + LG     + C
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKC 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV++  DV       IS   + DI+ NNAG+         +L  E + +   INV     
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFL 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             K     M     G I+   S T  L   A   Y  +K+A IG  +++A++L + GI +
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 179

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I+P  + T             V  + L  +             P D+  AA +LASDD
Sbjct: 180 NAIAPSLVRTATTEASALSAMFDVLPNMLQAI--------PRLQVPLDLTGAAAFLASDD 231

Query: 268 AKYVSGHNLVVDGGFT 283
           A +++G  L VDGG  
Sbjct: 232 ASFITGQTLAVDGGMV 247

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  222 bits (568), Expect = 2e-72
 Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 11/256 (4%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL--GQQTAKEL---GPNATFIACDV 89
           KVA++TG A GIG+  + K  ++G  + +AD+  Q     +T K +      A F+  DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T +++   A+D    K    D++ NNAG+A    + ++++  E   Q+  +NV  V  GI
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGIA--QIKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 150 KHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           + ++R        G I+  AS+  + G      YS +K A+ GL ++ A EL   G  +N
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAALYLASD 266
             +P  + T  + E++    + ++   + E    YS+ +  G    P D+A    +LAS+
Sbjct: 181 AYAPGIVGTG-MWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE 239

Query: 267 DAKYVSGHNLVVDGGF 282
           ++ YV+G  ++VDGG 
Sbjct: 240 NSNYVTGQVMLVDGGM 255

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  222 bits (568), Expect = 5e-72
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 26/273 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------QQTAKE- 77
            L  KVA ITGAA G G+A A +  ++GA ++  D+  Q+               T K  
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 78  --LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
             +G        DV     +S A+   + +  +LDI+  NAG+A       +    + + 
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA------PMSAGDDGWH 123

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHT----YSVSKSAII 190
            V+ +N+ GV   IK +   ++ + + G I+  +S  GL G  +       Y  +K  ++
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVV 183

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH 250
           GL++  A  L    IR+N I P  + TP +  E ++ +    A+           +    
Sbjct: 184 GLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEV 243

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
             P D+ANA  +L SD A+Y++G  L VD GF 
Sbjct: 244 LAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  220 bits (564), Expect = 1e-71
 Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 30/273 (10%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATF 84
            + LE KV +ITG+++G+GK+ A +F +  AKVV+     +       +E+   G  A  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT ESDV + V   I +  +LD+M NNAG+         +++L  +++V+  N+ G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS--SHEMSLSDWNKVIDTNLTG 119

Query: 145 VVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              G + + +  +     G ++  +SV   +       Y+ SK  +  + +++A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 204 GIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           GIR+N I P AI TP         E+ + + + +    +       G       EP +IA
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI-------G-------EPEEIA 225

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFT---SFKN 287
             A +LAS +A YV+G  L  DGG T   SF+ 
Sbjct: 226 AVAAWLASSEASYVTGITLFADGGMTLYPSFQA 258

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  219 bits (560), Expect = 4e-71
 Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 11/257 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           LE   AL+TG + GIG     +  S GA V       +       +    G       CD
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           ++  S+  + ++   +  + +L+I+ NNAG+         D  +E +  +M IN      
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE--AKDYTVEDYSLIMSINFEAAYH 124

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
               +   +     G ++  +SV+G L    +  Y  +K A+  L + +A E  +  IR+
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N + P  I T  V           +    L  +     L     EP ++A    +L    
Sbjct: 185 NGVGPGVIATSLV----EMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFPA 239

Query: 268 AKYVSGHNLVVDGGFTS 284
           A YV+G  + VDGG  +
Sbjct: 240 ASYVTGQIIYVDGGLMA 256

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  220 bits (562), Expect = 5e-71
 Identities = 65/284 (22%), Positives = 115/284 (40%), Gaps = 37/284 (13%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------QQTAKE- 77
           ++++KV L+TG A G G++ A K    GA +++ DI H +             ++   E 
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 78  --LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
              G  A     DV   + VS  +   +++  +LD++  NAG+          L ++ F 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC----PLGAHLPVQAFA 122

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-----------YSV 184
               ++  GV+  +  +   +       I+ T SV GL+                  YS 
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180

Query: 185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP-----FVMEEMSQIYAGVDASRLLEL 239
           +K  +      +AA+L    IR N I P  + T       +  +          +  L  
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA 240

Query: 240 VYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
             +   +   + E +DI+NA  +LASD+++YV+G    VD G  
Sbjct: 241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  217 bits (554), Expect = 2e-70
 Identities = 70/253 (27%), Positives = 104/253 (41%), Gaps = 9/253 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
               K   +TGA  GIG ATA  F+  GAKV   D       Q   +          DV 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD-------QAFTQEQYPFATEVMDVA 56

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + V+      +++  +LD + N AG+          L+ E + Q   +NV G     +
Sbjct: 57  DAAQVAQVCQRLLAETERLDALVNAAGILRMGA--TDQLSKEDWQQTFAVNVGGAFNLFQ 114

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +      +R G I+  AS       +    Y  SK+A+  L  S+  EL   G+R N +
Sbjct: 115 QTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVV 174

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           SP +  T           A     R     +  G+  G    P +IAN  L+LASD A +
Sbjct: 175 SPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASH 234

Query: 271 VSGHNLVVDGGFT 283
           ++  ++VVDGG T
Sbjct: 235 ITLQDIVVDGGST 247

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  216 bits (552), Expect = 7e-70
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 27/269 (10%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L  K  L+TGAASGIG+A    F   GA +V  D + +L  +    L   A  +  DV+
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V       + +  +L  + + AGVA        +L LE +++V+R+N+ G     +
Sbjct: 63  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL--SWNLPLEAWEKVLRVNLTGSFLVAR 120

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +  V+     G ++ T SV G LG      Y+  K  ++GL +++A EL   G+R+N +
Sbjct: 121 KAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 177

Query: 211 SPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
            P  I TP  M          Q        R        G        P ++A AAL+L 
Sbjct: 178 LPGLIQTP--MTAGLPPWAWEQEVGASPLGRA-------G-------RPEEVAQAALFLL 221

Query: 265 SDDAKYVSGHNLVVDGGFTSFKNLKLPAP 293
           S+++ Y++G  L VDGG +      LP  
Sbjct: 222 SEESAYITGQALYVDGGRSIVGPPGLPPG 250

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  216 bits (553), Expect = 9e-70
 Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 30/265 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           + E   A+++G A G+G+AT  +  ++G  VVIAD+  + G+  A ELG  A F++ +VT
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT 86

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVRGVVA 147
            E  V  A++           +  + G         R     ++  F + + + + G   
Sbjct: 87  SEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYN 146

Query: 148 GIKHSTRVMIPRR------SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
             +     +           G ++ TAS+ G  G + Q  Y+ +K+ +IGL  + A +L 
Sbjct: 147 VARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS 206

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS-----RLLELVYSTGVLEGTHCEPNDI 256
             GIR+N I+P  + TP +     +  A   A+     RL       G        P++ 
Sbjct: 207 SAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRL-------G-------TPDEF 252

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A+AA +L ++   Y++G  + +DG 
Sbjct: 253 ADAAAFLLTNG--YINGEVMRLDGA 275

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  214 bits (548), Expect = 2e-69
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 24/263 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDV 89
           +L+   A +TGA SGIG      F ++GA++++ D +     + A+EL    A  I  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           T    ++ A          + I+ N+AG+A       ++ +   + QVM +NV G+    
Sbjct: 68  TDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHD--ALETDDATWRQVMAVNVDGMFWAS 124

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGLVKSMAAELCEYGIRI 207
           +   R M+ R +G I+   S++G +    Q    Y  SK A+  L +++AAE    G+R+
Sbjct: 125 RAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRV 184

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAALY 262
           N ++P  + T     EM+              +  T     G       EP++IA AAL+
Sbjct: 185 NALAPGYVAT-----EMTLKMRE-RPELFETWLDMTPMGRCG-------EPSEIAAAALF 231

Query: 263 LASDDAKYVSGHNLVVDGGFTSF 285
           LAS  A YV+G  L VDGG+T +
Sbjct: 232 LASPAASYVTGAILAVDGGYTVW 254

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  214 bits (547), Expect = 5e-69
 Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 27/256 (10%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           + ++KV +ITGA+ GIG      +     +VV                 P+   +A D++
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSI------KPSADPDIHTVAGDIS 78

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           K       V   I +  ++D + NNAGV    P   V++  E +D  + +NV G     +
Sbjct: 79  KPETADRIVREGIERFGRIDSLVNNAGVFLAKP--FVEMTQEDYDHNLGVNVAGFFHITQ 136

Query: 151 HSTRVMIPRRSGCILCTASVTGLLG--GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +   M+ + SG I+   +        G+     S++K  +  + +S+A E    G+R+N
Sbjct: 137 RAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVN 196

Query: 209 CISPFAIPTPFVMEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
            +SP  I TP    E  S +       R+           G      D+ +A LYL  + 
Sbjct: 197 AVSPGVIKTPMHPAETHSTLAGLHPVGRM-----------GE---IRDVVDAVLYL--EH 240

Query: 268 AKYVSGHNLVVDGGFT 283
           A +++G  L VDGG  
Sbjct: 241 AGFITGEILHVDGGQN 256

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  213 bits (544), Expect = 1e-68
 Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 28/264 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           ++EKV +ITG +SG+GK  A +F   GA+VVI     +  ++   E+         +  D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V    D+   ++    K  ++DI+ NNA      P    DL++  ++ V+ I + G    
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICP--AEDLSVNGWNSVINIVLNGTFYC 121

Query: 149 IKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL-CEYGIR 206
            +   +  I     G I+   +      G      + +K+ ++ + K++A E   +YGIR
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181

Query: 207 INCISPFAIPTPFVMEEMS-------QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           +N I+P  I      +++        +    V   RL           GT   P +IA  
Sbjct: 182 VNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRL-----------GT---PEEIAGL 227

Query: 260 ALYLASDDAKYVSGHNLVVDGGFT 283
           A YL SD+A Y++G  + +DGG  
Sbjct: 228 AYYLCSDEAAYINGTCMTMDGGQH 251

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  213 bits (545), Expect = 1e-68
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 9/265 (3%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-----QHQLGQQTAKELGP 80
           +   + +  K A+ITG+ SGIG A A      GA +V+           +  + A     
Sbjct: 17  NLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG 76

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
                  D+TK S+++D +     +    DI+ NNAGV       I D  +E +D+++ +
Sbjct: 77  TVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEK--IEDFPVEQWDRIIAV 134

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+      I+ +   M  +  G I+  AS  GL+    +  Y  +K  I+GL K++A E+
Sbjct: 135 NLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEV 194

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIAN 258
            E G+ +N I P  + TP V +++       G+   +++  V   G           +A+
Sbjct: 195 AESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVAS 254

Query: 259 AALYLASDDAKYVSGHNLVVDGGFT 283
            ALYLA DDA  ++G ++ +DGG+T
Sbjct: 255 LALYLAGDDAAQITGTHVSMDGGWT 279

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  211 bits (540), Expect = 3e-68
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  +  L+TGA  GIG+ T     + GA+VV             +E  P    +  D+  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-CPGIEPVCVDLGD 63

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                +A +  +     +D++ NNA VA   P   +++  E FD+   +N+R V+   + 
Sbjct: 64  W----EATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 152 STRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             R +I R   G I+  +S            Y  +K A+  L K MA EL  + IR+N +
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAALYLAS 265
           +P  + T       S      D  +   ++                E   + NA L+L S
Sbjct: 178 NPTVVMTSMGQATWS------DPHKAKTMLNRIPLGKFA-------EVEHVVNAILFLLS 224

Query: 266 DDAKYVSGHNLVVDGGFT 283
           D +   +G  L V+GGF 
Sbjct: 225 DRSGMTTGSTLPVEGGFW 242

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  212 bits (541), Expect = 4e-68
 Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 32/271 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
               K  ++TG   GIG A      + GA V +         +  +++    G       
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV+    V+  +    +    +  +  NAGV+   P    +L  E F  V  +NV GV 
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVF 128

Query: 147 AGIKHSTRVMIPR-RSGCILCTASVTG-------LLGGLAQHTYSVSKSAIIGLVKSMAA 198
              +   ++ + + + G I+ T+S++        L G L Q  Y+ SK+A   LVK +AA
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188

Query: 199 ELCEYGIRINCISPFAIPTP---FVMEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
           E    GIR+N +SP  + T     + +++     + +  +R                +P 
Sbjct: 189 EWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRF--------------AQPE 234

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGFTSF 285
           ++   A+ L SD A Y++G    +DGG   +
Sbjct: 235 EMTGQAILLLSDHATYMTGGEYFIDGGQLIW 265

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  213 bits (544), Expect = 5e-68
 Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 23/274 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------QQTAKE- 77
           +L+ KVA ITGAA G G+  A +   +GA +V  D+  Q              ++T +  
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 78  --LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
              G        DV   + +   VD  +++   +DI+ +N G++      +V L  + + 
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS--NQGEVVSLTDQQWS 160

Query: 136 QVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
            +++ N+ G     +     MI R + G ++  +S  GL G   Q  Y+ SK  + GL+ 
Sbjct: 161 DILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLML 220

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL-----ELVYSTGVLEGT 249
           S+A E+  + IR+N ++P A+ T   + E                   EL     +L   
Sbjct: 221 SLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIP 280

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
             EP D++NA  +LASD+A+Y+ G  + VDGG  
Sbjct: 281 WVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  210 bits (537), Expect = 1e-67
 Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 10/257 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKELGPNATFIACDVT 90
           L+ K AL+TG+ SGIG   A      GA +V+                G  A     D++
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + +         +   +DI+ NNAG+    P  +    LE +D+++ +N+  V  G +
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLSAVFHGTR 119

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +   M  R  G I+  ASV GL+G   +  Y  +K  ++GL K +  E     +  N I
Sbjct: 120 LALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE----GTHCEPNDIANAALYLASD 266
            P  + TP V +   QI                 + E         P  +    L+L S+
Sbjct: 180 CPGWVLTPLVQK---QIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236

Query: 267 DAKYVSGHNLVVDGGFT 283
               V G    VDGG+ 
Sbjct: 237 AGSQVRGAAWNVDGGWL 253

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  210 bits (536), Expect = 1e-67
 Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 26/259 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
                AL+TGA  GIG+ T     ++GAKVV     +      AKE  P    +  D+  
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-CPGIEPVCVDLGD 63

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                DA +  +     +D++ NNA +    P   +++  E FD+   +N+R V    + 
Sbjct: 64  W----DATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQM 117

Query: 152 STRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             R MI R   G I+  +S+   +      TYS +K A+  L K+MA EL  + IR+N +
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 177

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAALYLAS 265
           +P  + T    +  +      D     +L                 E  D+ N+ L+L S
Sbjct: 178 NPTVVLTDMGKKVSA------DPEFARKLKERHPLRKFA-------EVEDVVNSILFLLS 224

Query: 266 DDAKYVSGHNLVVDGGFTS 284
           D +   SG  ++VD G+ +
Sbjct: 225 DRSASTSGGGILVDAGYLA 243

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  210 bits (538), Expect = 1e-67
 Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ K  L+TG   GIG A   +F   GA +           +   +    G   T   CD
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
            +   +    +    S    +LDI+ NN G     P   +D   E F   +  N+     
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLESAYH 129

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +  ++     G I+  +S+ G++       YS +K A+  L +++A E    GIR 
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189

Query: 208 NCISPFAIPTPF---VMEE--MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           N ++P  I TP    V ++     + +     R                EP ++++   +
Sbjct: 190 NAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRF--------------GEPEEVSSLVAF 235

Query: 263 LASDDAKYVSGHNLVVDGGFT 283
           L    A Y++G  + VDGG T
Sbjct: 236 LCMPAASYITGQTICVDGGLT 256

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  209 bits (535), Expect = 2e-67
 Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 8/259 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            +  KVA+ITG++SGIG A A  F   GA +V+   Q     + A+ L    G     +A
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV     V   V+   S     DI+ NNAG    +  +I++   E +     + V   V
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTG--SNETIMEAADEKWQFYWELLVMAAV 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              +     M  R  G I+  AS+  +     +  Y+V+K+A++   K++A E+ +  IR
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 207 INCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +NCI+P  I TP  ++   ++    G D    L+ V            P ++AN  ++L 
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC 241

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           S+ A Y  G    VDGG  
Sbjct: 242 SERATYSVGSAYFVDGGML 260

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  210 bits (536), Expect = 3e-67
 Identities = 69/254 (27%), Positives = 102/254 (40%), Gaps = 13/254 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L +KVA ITG  SGIG   A  F+ +G   VIA          A++L    G     ++ 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV     V  AVD  + +  ++DI+ N A      P     L+   F  VM I+  G   
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP--AGALSFNAFKTVMDIDTSGTFN 142

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             +           G I+   +  G  G   Q     +K+A+  + + +A E     IR+
Sbjct: 143 VSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I     +  +    A +           T           +IA++ LYLAS  
Sbjct: 203 NSLAPGPISGTEGLRRLGGPQASLST-------KVTASPLQRLGNKTEIAHSVLYLASPL 255

Query: 268 AKYVSGHNLVVDGG 281
           A YV+G  LV DGG
Sbjct: 256 ASYVTGAVLVADGG 269

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  209 bits (535), Expect = 4e-67
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           K  +K+A++TGA SG+G+A A      G  V +A  +    Q+TA E+G +A  +  DVT
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT 84

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V      T+ K  ++D+++NNAG        + DL    + QV+  N+ G     +
Sbjct: 85  DPDSVRALFTATVEKFGRVDVLFNNAGTG-APAIPMEDLTFAQWKQVVDTNLTGPFLCTQ 143

Query: 151 HSTRVMIPR--RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            + RVM  +  R G I+   S++          Y+ +K AI GL KS + +   + I   
Sbjct: 144 EAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203

Query: 209 CISPFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            I      TP        + Q    +    ++              +   +A+A +Y+AS
Sbjct: 204 QIDIGNADTPMAQKMKAGVPQADLSIKVEPVM--------------DVAHVASAVVYMAS 249

Query: 266 D-DAKYVSGHNL 276
                 V    +
Sbjct: 250 LPLDANVQFMTI 261

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  208 bits (533), Expect = 4e-67
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 30/265 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIAC 87
           L+ K  LITG++ GIG ATA  F   GAKV +          +T   +   G +A F A 
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+         VD  ++K   +D++ NNAG      + + +++   +D VM  N+R VV 
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVM 123

Query: 148 GIKHSTRVMIPR-----RSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELC 201
             K +   +        ++  ++ T S+ G  GG      Y  +K+ +  + K+      
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT 183

Query: 202 EYGIRINCISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           + G+R N +SP  + T F      +   +I  G+   R            GT     ++A
Sbjct: 184 KDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRF-----------GT---AEEMA 229

Query: 258 NAALYLASDDA-KYVSGHNLVVDGG 281
            A L+ AS  A  Y++G  L ++GG
Sbjct: 230 PAFLFFASHLASGYITGQVLDINGG 254

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  208 bits (531), Expect = 6e-67
 Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 9/249 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
            +AL+T A    G A       +G  VV  D       +  +    N          E  
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP---GTIALAEQK 58

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRS-IVDLNLEVFDQVMRINVRGVVAGIKHST 153
               VD T+     +D + +N  +     R  +   +     Q+        +  ++ + 
Sbjct: 59  PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
             +       ++   S  G         Y  +++A + LV+S A  L   GI +  I P 
Sbjct: 119 APLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPN 178

Query: 214 AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG 273
               P          +  + +  L       V  G    P+++     +LAS  A  + G
Sbjct: 179 FFNNP-----TYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVG 233

Query: 274 HNLVVDGGF 282
                 GG+
Sbjct: 234 QFFAFTGGY 242

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  210 bits (536), Expect = 7e-67
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 17/260 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--------GPNAT 83
           L+ +VA++TG A+GIGKA   + +  G+ VVIA  + +  +  A EL             
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I C++  E +V++ V  T+    +++ + NN G    +P     ++ + +  V+  N+ 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEHISSKGWHAVLETNLT 133

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G     K      +    G I+    V    G         +++ +  L KS+A E    
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIV-NIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GIRINC++P  I +     + +    G       E  +   +       P ++++   +L
Sbjct: 193 GIRINCVAPGVIYS-----QTAVENYGSWGQSFFEGSFQK-IPAKRIGVPEEVSSVVCFL 246

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
            S  A +++G ++ VDGG +
Sbjct: 247 LSPAASFITGQSVDVDGGRS 266

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  207 bits (530), Expect = 8e-67
 Identities = 62/252 (24%), Positives = 97/252 (38%), Gaps = 26/252 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI--- 85
           L+ +V L+TGAA GIG A A  + ++GA VV+         + + ++   G     I   
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             +        +       +  +LD + +NA +       +  L  E F QVM +NV   
Sbjct: 72  NLENATAQQYRELAARVEHEFGRLDGLLHNASII-GPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC-EYG 204
               +    ++       I  T+S  G  G      Y VSK A  GL++++A EL     
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +R N I+P A  T       +Q Y   +                    P DI    LYL 
Sbjct: 191 VRANSINPGATRTGM----RAQAYPDENPLNNP--------------APEDIMPVYLYLM 232

Query: 265 SDDAKYVSGHNL 276
             D+  ++G  L
Sbjct: 233 GPDSTGINGQAL 244

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  207 bits (529), Expect = 2e-66
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 9/259 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADI-----QHQLGQQTAKELGPNATFIA 86
           L+ KVA++TG+ SGIG   A    + GA +V+          ++    A + G    +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D++K   V   VD  + +  ++DI+ NNAG+       I D   E +D ++ +N+  V 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            G   +   M  +  G I+  AS  GL+    +  Y  +K  ++G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 207 INCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
            N I P  + TP V +++S +    GVD       + S          P  +   A++LA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           SD A  ++G  + VDGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  207 bits (530), Expect = 2e-66
 Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 25/266 (9%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPN 81
           +      E ++AL+TG  +G+G+  A    + G  VVI   +  +    A E+    G  
Sbjct: 25  AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI 84

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
              + CDV     V+       ++  +LD++ NNAG     P  + ++  E ++ ++  N
Sbjct: 85  VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN-VPPVPLEEVTFEQWNGIVAAN 143

Query: 142 VRGVVAGIKHSTRVMIPR--RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           + G     +H+ R+M  +  R G I+   S++          Y+ +K AI GL KS A +
Sbjct: 144 LTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALD 203

Query: 200 LCEYGIRINCISPFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
              + I    I      T         + Q    V A   +                  I
Sbjct: 204 GRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTI--------------PIEHI 249

Query: 257 ANAALYLASD-DAKYVSGHNLVVDGG 281
           A A +Y+AS   +  V    ++    
Sbjct: 250 AEAVVYMASLPLSANVLTMTVMATRM 275

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  207 bits (529), Expect = 3e-66
 Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 30/267 (11%)

Query: 31  KLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL----GPNAT 83
            L+ KV ++TGA    G+G   A      GA V I      Q  ++  KEL    G  A 
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
              C V         V   ++   Q+D    NAG    +   I+D ++E ++ V+++++ 
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG--ILDGSVEAWNHVVQVDLN 134

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--GLAQHTYSVSKSAIIGLVKSMAAELC 201
           G     K        R +G ++ TAS++G +      Q +Y+V+K+  I + +S+A E  
Sbjct: 135 GTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR 194

Query: 202 EYGIRINCISPFAIPTP---FVMEEM-SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           ++  R+N ISP  I T    FV +E     ++ +   R                   ++ 
Sbjct: 195 DF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRD--------------GLAKELK 239

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTS 284
            A +Y ASD + Y +G +L++DGG+T+
Sbjct: 240 GAYVYFASDASTYTTGADLLIDGGYTT 266

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  207 bits (529), Expect = 3e-66
 Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 25/263 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L  +VAL+TG + G+G   A      G  VV+A    +   + A++L    G       C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+   +V   ++    K  +LD + N AG+  + P    +  L+ F QV+ +N+ G   
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYY 136

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIR 206
             + +  ++    +  I+   S+T     +   + Y+ SK  +  L K++A E   YGIR
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAAL 261
           +N I+P    T     +M++     D  +L  ++        G        P D+   A+
Sbjct: 197 VNVIAPGWYRT-----KMTEAVFS-DPEKLDYMLKRIPLGRTG-------VPEDLKGVAV 243

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +LAS++AKYV+G  + VDGG+T+
Sbjct: 244 FLASEEAKYVTGQIIFVDGGWTA 266

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  207 bits (528), Expect = 4e-66
 Identities = 64/268 (23%), Positives = 102/268 (38%), Gaps = 32/268 (11%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------QQTAKEL--- 78
           S  L  K   ITGA+ GIG A A +   +GA V IA                 A  +   
Sbjct: 1   SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           G     + CD+ +E  V  AV  T+     +DI+ NNA          +D  ++ FD + 
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG--TLDTPMKRFDLMQ 118

Query: 139 RINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQHT-YSVSKSAIIGLVKSM 196
           ++N RG     +     ++   +  IL  A    L       HT Y+++K  +  +   +
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGL 178

Query: 197 AAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           AAE    G+ IN +     P   +  +   +  GVDA+                  P  +
Sbjct: 179 AAEFGPQGVAINALW----PRTVIATDAINMLPGVDAAAC-----------RR---PEIM 220

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGFTS 284
           A+AA  + + +A    G  L+ D     
Sbjct: 221 ADAAHAVLTREAAGFHGQFLIDDEVLAQ 248

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  206 bits (526), Expect = 2e-65
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 28/264 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
            + KVA ITG  +G+GK       S GA+ VIA  +  + + TA+++    G     I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV     V + V   I      +I+ NNA     +P     L+   +  +  I + G   
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP--TERLSPNAWKTITDIVLNGTAF 141

Query: 148 GIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                 + +I  ++    L   ++    G       + +K+ +  + KS+AAE  +YG+R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201

Query: 207 INCISPFAIPTPFVM-------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
            N I P  I T               ++   +   RL           GT     ++AN 
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRL-----------GT---VEELANL 247

Query: 260 ALYLASDDAKYVSGHNLVVDGGFT 283
           A +L SD A +++G  +  DGG  
Sbjct: 248 AAFLCSDYASWINGAVIKFDGGEE 271

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  204 bits (521), Expect = 3e-65
 Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 22/258 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIAC 87
            + K AL+TG++ G+GKA A +   NG  +VI   + +    +TA+E+   G     +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +V + + + +          +LD+  NNA      P  +++L    +D  M IN + ++ 
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP--VMELEETHWDWTMNINAKALLF 119

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + + ++M     G I+  +S+  +       T  VSK+A+  L + +A EL    I +
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT----HCEPNDIANAALYL 263
           N +S  AI T     +  + +   +              + T      E  D+ +   +L
Sbjct: 180 NAVSGGAIDT-----DALKHFPNREDLL-------EDARQNTPAGRMVEIKDMVDTVEFL 227

Query: 264 ASDDAKYVSGHNLVVDGG 281
            S  A  + G  ++VDGG
Sbjct: 228 VSSKADMIRGQTIIVDGG 245

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  204 bits (522), Expect = 4e-65
 Identities = 68/273 (24%), Positives = 108/273 (39%), Gaps = 22/273 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG------------QQTAKE- 77
             E K ALITG A G+G++ A      GA + I D                   +T    
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 78  --LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD 135
              G        DV   + +   V         +DI   NAG++  T   + ++    +D
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVESAQWD 124

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS 195
           +V+  N+ G    I      MI R  G I+  +S+ G     AQ +Y  SK  +IGL K 
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184

Query: 196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA-----SRLLELVYSTGVLEGTH 250
            A +L  YGI +N ++P  I TP    +        D        +  +  S  +     
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
            +P ++  A L+L  + + +++G  L +D G T
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  203 bits (519), Expect = 5e-65
 Identities = 40/267 (14%), Positives = 84/267 (31%), Gaps = 35/267 (13%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
                   K  L+ G +  +G      F S     +  D          +E         
Sbjct: 15  VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF---------RENPNADHSFT 65

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
              + E ++   ++   SK  ++D     AG          D  L+    ++ +N+    
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAF 124

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYG 204
           A      +++   + G  + T +   L        Y  +K+A   ++K +A+E      G
Sbjct: 125 ASAHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAG 182

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL-YL 263
                I P  + TP   + MS      +                     +++A     + 
Sbjct: 183 STSLGILPVTLDTPTNRKYMSD----ANFDDW--------------TPLSEVAEKLFEWS 224

Query: 264 ASDDAKYVSGHNLVVD--GGFTSFKNL 288
            + D++  +G  +  +     T++ NL
Sbjct: 225 TNSDSRPTNGSLVKFETKSKVTTWTNL 251

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  203 bits (520), Expect = 8e-65
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 16/260 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIA 86
           +    VA++TG   GIG   A    ++G  + I  I    G      EL   G    F+ 
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D+   S     VD  +++  ++D + NNAG+A       +DL  E FD ++ +N+RG V
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTV 145

Query: 147 AGIKHSTRVMI---PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
              +   + M+    R S  I+   SV+ ++    +  Y +SK+ +    + +A  L E 
Sbjct: 146 FFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAET 205

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           GI +  + P  I +     +M+       + +   L+ S  V      EP DI N    L
Sbjct: 206 GIAVFEVRPGIIRS-----DMTA----AVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGL 256

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
           A     + +G  +  DGG +
Sbjct: 257 AGGQFGFATGSVIQADGGLS 276

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  203 bits (518), Expect = 9e-65
 Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 24/262 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  K AL+TG+A G+G A A    + GA+V++ DI+  L  ++   L   G +A  +A D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT E  +  A     ++   +DI+ NNAG+  + P  +V+L LE + +V+  N+      
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP--MVELELENWQKVIDTNLTSAFLV 124

Query: 149 IKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            + + + MI R S G I+   S+T          Y+ +K  I  L  SMAAE  ++ I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAALY 262
           N I P  I T     +M+      D      +  ST     G        P ++   A++
Sbjct: 185 NAIGPGYILT-----DMNTALIE-DKQFDSWVKSSTPSQRWG-------RPEELIGTAIF 231

Query: 263 LASDDAKYVSGHNLVVDGGFTS 284
           L+S  + Y++G  + VDGG+ +
Sbjct: 232 LSSKASDYINGQIIYVDGGWLA 253

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  202 bits (516), Expect = 1e-64
 Identities = 43/250 (17%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADI--QHQLGQQTAKELGPNATFIACDVTKE 92
           KV L+TG + GIGK+      S     V+  +       ++  ++ G    ++  D+T++
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITED 62

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
           S +   V+  +  H ++D +  NAGV  +  +++ ++++  + ++  IN   +V+ +  +
Sbjct: 63  SVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKKLYDINFFSIVSLVGIA 121

Query: 153 TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
              +  + +G ++  +S    +   +   Y  SK+A+     ++A E  E  ++   ++P
Sbjct: 122 LPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAP 178

Query: 213 FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD-AKYV 271
             + T   +     +     ++  L++ +          + +  A     LA       V
Sbjct: 179 GIVDTDMQVNIRENVGPSSMSAEQLKM-FRGLKENNQLLDSSVPATVYAKLALHGIPDGV 237

Query: 272 SGHNLVVDGG 281
           +G  L  +  
Sbjct: 238 NGQYLSYNDP 247

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  201 bits (513), Expect = 4e-64
 Identities = 43/251 (17%), Positives = 86/251 (34%), Gaps = 10/251 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
             A++T      G  +A +    G  V   D   +   +         T+       E +
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA---ETYPQLKPMSEQE 58

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRGVVAGIKHS 152
            ++ ++   S + Q+D++ +N       P    I    +E +   +        A +   
Sbjct: 59  PAELIEAVTSAYGQVDVLVSNDIF---APEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 153 TRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISP 212
              M  R+SG I+   S T         TY+ +++    L  +++ EL EY I +  I P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 213 FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS 272
             + +              +   +  +   T +         ++     +LAS    Y++
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL--QRLGTQKELGELVAFLASGSCDYLT 233

Query: 273 GHNLVVDGGFT 283
           G    + GGF 
Sbjct: 234 GQVFWLAGGFP 244

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  200 bits (511), Expect = 9e-64
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 31/263 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            L+ +  ++TG   GIG+  A  F   GA V +A            +L          + 
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMRINVRGV 145
            DV+  +         + +   +D++  NAGV    P   +  +  E  + +  +NV G 
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGV---FPDAPLATMTPEQLNGIFAVNVNGT 123

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCEYG 204
              ++     +I   SG ++ T+S+TG + G      Y  +K+A +G +++ A EL  + 
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I +N I P  I T          E ++ +   + A  L                P DI +
Sbjct: 184 ITVNAIMPGNIMTE--GLLENGEEYIASMARSIPAGAL--------------GTPEDIGH 227

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
            A +LA+ +A Y++G  + VDGG
Sbjct: 228 LAAFLATKEAGYITGQAIAVDGG 250

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  200 bits (510), Expect = 1e-63
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 12/256 (4%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           + +L  K AL+TGAA GIGKA AA+  ++GA V+++DI  +  +  A  +G  A  IA D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           ++    V        +    +DI+ NNA +         D++L+ + +++ +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA--WDDVDLDHWRKIIDVNLTGTFIV 118

Query: 149 IKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +  T  M    ++G ++  AS T   G      Y  +K  +IG  +++A EL +Y I  
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I +     +          +     V     +     +P  IA+   +LASDD
Sbjct: 179 NAVTPGLIES-----DGV---KASPHNEAFGFVEMLQAM-KGKGQPEHIADVVSFLASDD 229

Query: 268 AKYVSGHNLVVDGGFT 283
           A++++G  L VD G  
Sbjct: 230 ARWITGQTLNVDAGMV 245

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  201 bits (512), Expect = 2e-63
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA 86
              + + A++TG ASGIG ATA +F   GA++V++D+     +Q    L   G +A  + 
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDV    ++    D        +D++++NAG+    P  +  +N + +  V+ I++ G +
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP--LAQMNHDDWRWVIDIDLWGSI 144

Query: 147 AGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             ++     ++ +   G I  TAS  GL+      TY V+K  ++GL +++A E+   GI
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            ++ + P  + T  V        A    S   E  +     +      +D+A        
Sbjct: 205 GVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL 264

Query: 266 DDAKYVSGH 274
            +  Y+  H
Sbjct: 265 ANRLYILPH 273

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  198 bits (506), Expect = 6e-63
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 32/254 (12%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  +VA++TGA+ GIG A A K  S GA+VV+     +  +   +E+   G  A   ACD
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRGVV 146
           ++    ++      ++ H + D++ NNAGV         +  +    +D ++ +N++   
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGV---GWFGGPLHTMKPAEWDALIAVNLKAPY 143

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             ++     MI  + G I+  +S+ G         Y+ SK  + GL+ S A EL ++ +R
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203

Query: 207 INCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           ++ ++P ++ T F   +  + S + A                      EP+DIA+    L
Sbjct: 204 VSLVAPGSVRTEFGVGLSAKKSALGAI---------------------EPDDIADVVALL 242

Query: 264 ASDDAKYVSGHNLV 277
           A+   +      LV
Sbjct: 243 ATQADQSFISEVLV 256

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  198 bits (507), Expect = 7e-63
 Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 25/260 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L  + A++TGA SGIG+A A  +   GA V+       + ++ A E+   G +A  +  D
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVAD 87

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +      ++  +  ++   ++D++ NNAG+  + P    +++L  + +V+ +N+      
Sbjct: 88  LADLEGAANVAE-ELAATRRVDVLVNNAGIIARAP--AEEVSLGRWREVLTVNLDAAWVL 144

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +     M+   SG I+  AS+    GG     Y+ SK A++GL +++A+E    G+ +N
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANAALYL 263
            ++P  + T       +      D  R  E+                  P D+   A++L
Sbjct: 205 ALAPGYVVT-----ANTAALRA-DDERAAEITARIPAGRWA-------TPEDMVGPAVFL 251

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
           ASD A YV G  L VDGG+ 
Sbjct: 252 ASDAASYVHGQVLAVDGGWL 271

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  196 bits (501), Expect = 2e-62
 Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 30/260 (11%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           E+ AL+TG + GIG+A A   ++ G +V IA       ++ A+ LG  A  +  D+ K+ 
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRN---PEEAAQSLG--AVPLPTDLEKD- 55

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
           D    V   +     L ++ + A V  + P   ++L+ E + +V+ +++       + + 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVNVRKP--ALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 154 RVMIPRRSGCILCTASVTGLLGG--LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             M     G +L   SVT    G  +    Y+ +K+A++GL +++A E    GIR+N + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 212 PFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           P  + T F +      E    I A +   R                 P +IA  A  L  
Sbjct: 174 PGYVETEFTLPLRQNPELYEPITARIPMGRW-------A-------RPEEIARVAAVLCG 219

Query: 266 DDAKYVSGHNLVVDGGFTSF 285
           D+A+Y++G  + VDGGF ++
Sbjct: 220 DEAEYLTGQAVAVDGGFLAY 239

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  196 bits (501), Expect = 8e-62
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 31/263 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            L  +  L+TG   GIG+  A  F   GA V +A    +       EL      N   + 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP-RSIVDLNLEVFDQVMRINVRGV 145
            DV+     +DA    +     LD++  NAG+    P   +  +  E   +V+ +NV+G 
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGI---FPEARLDTMTPEQLSEVLDVNVKGT 154

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCEYG 204
           V  ++     +     G ++ T+S+TG + G      Y  SK+A +G +++ A EL   G
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRG 214

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           + +N I P  I T          E +S +   +    L           G+   P DI +
Sbjct: 215 VTVNAILPGNILTE--GLVDMGEEYISGMARSIPMGML-----------GS---PVDIGH 258

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
            A +LA+D+A Y++G  +VVDGG
Sbjct: 259 LAAFLATDEAGYITGQAIVVDGG 281

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  195 bits (498), Expect = 9e-62
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 31/265 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ +V ++TGA+SG+G A        GA V+  D++   G++ A ELG    F   DVT
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
            E+D + A+ F   +   +  + N AG     K         L+ F + + +N+ G    
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNM 123

Query: 149 IKHSTRVMIPRR------SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           I+ +  VM           G I+ TAS+    G + Q  Y+ SK  +  L    A EL  
Sbjct: 124 IRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELAR 183

Query: 203 YGIRINCISPFAIPTPFVMEEMSQ-IYAGVDAS-----RLLELVYSTGVLEGTHCEPNDI 256
           +GIR+  I+P    TP +M  M Q +   + AS     RL       G          + 
Sbjct: 184 FGIRVVTIAPGIFDTP-MMAGMPQDVQDALAASVPFPPRL-------G-------RAEEY 228

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A    ++  +    ++G  + +DG 
Sbjct: 229 AALVKHICENT--MLNGEVIRLDGA 251

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  195 bits (498), Expect = 1e-61
 Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 29/265 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDV 89
           L  ++AL+TG + GIG+  A   +  GA+V I     +    TA  L    +   I  D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV---- 145
           + E+              +LDI+ NNAG +      +    +  +++VM++NV  V    
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSVFSCI 144

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
              +    R         ++   SV G+   G   + Y  SK+A+  L + +A EL    
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEH 204

Query: 205 IRINCISPFAIPTPF------VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I +N I+P   P+          + +    A +   R            G    P ++A 
Sbjct: 205 INVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRW-----------GR---PEEMAA 250

Query: 259 AALYLASDDAKYVSGHNLVVDGGFT 283
            A+ LA     Y++G+ + +DGGF 
Sbjct: 251 LAISLAGTAGAYMTGNVIPIDGGFH 275

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  194 bits (496), Expect = 2e-61
 Identities = 55/254 (21%), Positives = 88/254 (34%), Gaps = 13/254 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
            V  ITG+ASGIG A        G  V+  D      +      G   T +A  + +   
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 95  VSD-----AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           V D     A     + ++ L +  N  GV+         L+       + +         
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
                ++    +G       +     G     Y+ SK A+  L +    +    G+R+N 
Sbjct: 122 AAELPMVEAMLAGDEARAIELAE-QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           ++P A+ TP     + Q  A     R  E         G   EP ++A A  +L    A 
Sbjct: 181 VAPGAVETP-----LLQ--ASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQAS 233

Query: 270 YVSGHNLVVDGGFT 283
           ++ G  L VDGG  
Sbjct: 234 FIHGSVLFVDGGMD 247

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  194 bits (495), Expect = 3e-61
 Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 25/269 (9%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF 84
           ++   R ++  VA+ITG ASG+G ATA + +  GA  V+ D+ +  G+  AK+LG N  F
Sbjct: 3   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVF 62

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN------LEVFDQVM 138
              DVT E DV  A+     K  ++D+  N AG+A        +L       LE F +V+
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIA--VASKTYNLKKGQTHTLEDFQRVL 120

Query: 139 RINVRGVVAGIKHSTRVMI------PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
            +N+ G    I+     M         + G I+ TASV    G + Q  YS SK  I+G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
              +A +L   GIR+  I+P    TP ++  + +        ++   + S         +
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTP-LLTSLPE--------KVCNFLASQVPFPSRLGD 231

Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDGG 281
           P + A+    +  +   +++G  + +DG 
Sbjct: 232 PAEYAHLVQAIIENP--FLNGEVIRLDGA 258

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  192 bits (491), Expect = 3e-60
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 26/263 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA--DIQHQLGQQTAK---ELGPNAT 83
           S +L+++ AL+TG  SGIG+A A  +   GA V I     + +  QQ      E G  A 
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAV 103

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            +  D++ ES     V         LDI+   AG     P  I DL  E F Q   +NV 
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIP-EIKDLTSEQFQQTFAVNVF 162

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
            +    + +  ++   +   I+ T+S+           Y+ +K+AI+   + +A ++ E 
Sbjct: 163 ALFWITQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIAN 258
           GIR+N ++P  I T        QI  G    ++ +    T     G       +P ++A 
Sbjct: 221 GIRVNIVAPGPIWTAL------QISGGQTQDKIPQFGQQTPMKRAG-------QPAELAP 267

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
             +YLAS ++ YV+     V GG
Sbjct: 268 VYVYLASQESSYVTAEVHGVCGG 290

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  192 bits (490), Expect = 4e-60
 Identities = 69/289 (23%), Positives = 107/289 (37%), Gaps = 38/289 (13%)

Query: 20  RCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL 78
             S GL      +E   A++TGAA  IG+A A K    G +VVI            A EL
Sbjct: 9   HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68

Query: 79  ----GPNATFIACDVTKE----SDVSDAVDFTISKHNQLDIMYNNAGVACKTP------- 123
                  A     D+T      +   + ++       + D++ NNA     TP       
Sbjct: 69  NKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHE 128

Query: 124 -RSIVDLNLEVFDQVMRINVRGV------VAGIKHSTRVMIPRRSGCILCTASVTGLLGG 176
             S          +++  N           A  +  T       +  I+           
Sbjct: 129 DNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC 188

Query: 177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDAS 234
           +A   Y++ K A++GL +S A EL  YGIR+N ++P     P  M  EE  +    V   
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLG 248

Query: 235 RLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
           R             +      IA+A ++L S  A+Y++G  + VDGG +
Sbjct: 249 RRE----------AS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  192 bits (489), Expect = 4e-60
 Identities = 61/267 (22%), Positives = 100/267 (37%), Gaps = 30/267 (11%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------QQTAKE---L 78
           S  L  K   I+G + GIG A A +  ++GA V +     +            AKE    
Sbjct: 4   SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA 63

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           G  A  I  D+     V+ AV  T+ +   +DI  NNA         I ++ L+ FD + 
Sbjct: 64  GGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGS--IEEVPLKRFDLMN 121

Query: 139 RINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMA 197
            I VRG  A  +     M  R +  IL  +    L     + T Y ++K  +      +A
Sbjct: 122 GIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIA 181

Query: 198 AELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            EL + GI  N + P        ++ +      +  SR                +P   A
Sbjct: 182 EELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSR----------------KPEVYA 225

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTS 284
           +AA  + +  +   +G+ L+ +     
Sbjct: 226 DAAYVVLNKPS-SYTGNTLLCEDVLLE 251

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  190 bits (486), Expect = 7e-60
 Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 24/274 (8%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVI---ADIQHQLGQQTAKEL---G 79
            T+   L+ KV +I G    +G  TA  F      +V+            +   EL   G
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG 62

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
                   D++ E +V+   DF   +  ++DI  N  G   K P  IV+ +   FD +  
Sbjct: 63  AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKP--IVETSEAEFDAMDT 120

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           IN +     IK + + M    +G I+  A+           TY+ +K+ +    ++ + E
Sbjct: 121 INNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLE--GTHCEPNDIA 257
           L +  I +N I+P  + T F        + G +         S  +        +  DIA
Sbjct: 179 LMKQQISVNAIAPGPMDTSF--------FYGQETKESTAFHKSQAMGNQLT---KIEDIA 227

Query: 258 NAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP 291
               +L + D  +++G  +  +GG+T+ +     
Sbjct: 228 PIIKFLTT-DGWWINGQTIFANGGYTTREGHHHH 260

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  189 bits (483), Expect = 1e-59
 Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 18/244 (7%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFI 85
           S         + GA   IG   A KF + G  V       +       E+   G      
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           + D   E +V+  ++     H  L++   N G        I++    VF +V  +     
Sbjct: 62  SLDARNEDEVTAFLN-AADAHAPLEVTIFNVGAN--VNFPILETTDRVFRKVWEMACWAG 118

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
               + S R+M+    G I  T +   L GG     ++ +K  +  + +SMA EL    I
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 206 RI-NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
            + + I    + T +V E   Q++     +    L+            P  +A A   L 
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLM-----------PPAAVAGAYWQLY 227

Query: 265 SDDA 268
               
Sbjct: 228 QQPK 231

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  189 bits (482), Expect = 2e-59
 Identities = 51/259 (19%), Positives = 85/259 (32%), Gaps = 29/259 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
            L  K  +   A  GIG  T+ + +    K  +   + +     A+        N TF  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 87  CDVT-KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            DVT   ++    +     +   +DI+ N AG+          L+    ++ + IN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI----------LDDHQIERTIAINFTGL 111

Query: 146 VAGIKHSTRVMIPRRSG---CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           V            R+ G    I    SVTG         YS SK+A++    S+A     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            G+    I+P    TP V    S +      + LL    +                  + 
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT--------QTSEQCGQNFVK 223

Query: 263 LASDDAKYVSGHNLVVDGG 281
               +    +G    +D G
Sbjct: 224 AIEANK---NGAIWKLDLG 239

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  189 bits (483), Expect = 2e-59
 Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 18/259 (6%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFI 85
           ++   +  ++ GA   IG+A A +F   GA VV+      +       E+   G +A  I
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D+T  ++V  A+     K  ++  + + AG        I +++   + QV+ +N+  +
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLTSL 122

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYG 204
               K +   M   + G I+  +S  G  GG      Y+ SK A++   + +A E+    
Sbjct: 123 FLTAKTALPKM--AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-K 179

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           IR+N + P  I T F                   +  +T +         D+A    +LA
Sbjct: 180 IRVNAVCPGMISTTF-------HDTFTKPEVRERVAGATSL--KREGSSEDVAGLVAFLA 230

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           SDDA YV+G    ++GG  
Sbjct: 231 SDDAAYVTGACYDINGGVL 249

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  190 bits (485), Expect = 2e-59
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAK---ELGPNATF 84
           S KL+ K  LITG  SGIG+A +  F   GA + IA + +     +T +   + G     
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  D++ E    D V  T+ +   L+I+ NN          +  +  E  ++  RIN+  
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQ-GLEYITAEQLEKTFRINIFS 160

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                K +   +  ++   I+ TAS+    G      YS +K AI+   +S++  L + G
Sbjct: 161 YFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIANA 259
           IR+N ++P  I TP        I +  D  ++ +   +      G       +P ++A A
Sbjct: 219 IRVNGVAPGPIWTPL-------IPSSFDEKKVSQFGSNVPMQRPG-------QPYELAPA 264

Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
            +YLAS D+ YV+G  + V+GG
Sbjct: 265 YVYLASSDSSYVTGQMIHVNGG 286

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  188 bits (480), Expect = 2e-59
 Identities = 53/252 (21%), Positives = 96/252 (38%), Gaps = 23/252 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           +     ++TGA SG+G+A     +  G +V +   ++Q  QQ    LG     I  D+  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             DV  A    +      +++ + AG     P  +     E   +VM  N+   +   + 
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGP--VGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           + R++   R G +    S    +G   +  Y  SK  + G ++S+ AEL +  +R+  + 
Sbjct: 119 TVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLY 177

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY-LASDDAKY 270
           P  I + F           VD S  +               P D A   L  L +  + +
Sbjct: 178 PSGIRSEF-----WDNTDHVDPSGFM--------------TPEDAAAYMLDALEARSSCH 218

Query: 271 VSGHNLVVDGGF 282
           V+   +  + G 
Sbjct: 219 VTDLFIGRNEGH 230

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  188 bits (479), Expect = 5e-59
 Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 27/246 (10%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNA 82
           S + ++ +A+ITGA+ GIG   AA   ++G +VV+     Q  ++   E+          
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEP 61

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
             +  D+T  +     +     K+  +DI+ N A +        +   ++ F ++M INV
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAM---FMDGSLSEPVDNFRKIMEINV 118

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
                 +K  T +M  +++G I   AS     G      Y  +K A++GL +S+  EL  
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            GIR+  + P  + T               A +         ++     +P+D+ N    
Sbjct: 179 LGIRVTTLCPGWVNTDM-------------AKKAGTPFKDEEMI-----QPDDLLNTIRC 220

Query: 263 LASDDA 268
           L +   
Sbjct: 221 LLNLSE 226

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  187 bits (478), Expect = 6e-59
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 39/263 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L++K  LITGAA GIG+AT   F   GA++V  DI+    ++ A+ +G  A  +  DV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVA 59

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVRG 144
             + V       ++   +LD + + AG        I   N       E ++ V+R+N+ G
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAG--------ITRDNFHWKMPLEDWELVLRVNLTG 111

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                K ++  M  +  G I+ TAS    LG L Q  Y+ S + ++GL +++A EL  +G
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWG 170

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           IR+N ++P  I T   M      +   +  A     R            G    P ++A 
Sbjct: 171 IRVNTLAPGFIETR--MTAKVPEKVREKAIAATPLGRA-----------GK---PLEVAY 214

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           AAL+L SD++ +++G  L VDGG
Sbjct: 215 AALFLLSDESSFITGQVLFVDGG 237

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  187 bits (477), Expect = 7e-59
 Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 31/254 (12%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAK-------VVIADIQHQLGQQTAKEL---GPNAT 83
           + + LITGA  GIG+A A +F             +V++       ++ + E    G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD 61

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I  D++  +DV       + ++  +D + NNAGV       + DL  E FD  M  N++
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTNLK 119

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           G     +    +M  + SG I    SV           Y +SK    GLV++M     + 
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 179

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +RI  + P A+ T      M         + ++               P DIA   +  
Sbjct: 180 NVRITDVQPGAVYT-----PMWGKVDDEMQALMM--------------MPEDIAAPVVQA 220

Query: 264 ASDDAKYVSGHNLV 277
               ++ V    ++
Sbjct: 221 YLQPSRTVVEEIIL 234

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  188 bits (480), Expect = 1e-58
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 12/267 (4%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GP 80
           L  +S  LE KVAL+TGA  GIG+  A +    G KV++         ++    +   G 
Sbjct: 20  LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 79

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
           +A  +  +V    D+    +  +    +LDI+ +N+GV       + D+  E FD+V  I
Sbjct: 80  DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTI 137

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAE 199
           N RG     + + + +     G ++   S+TG    + +H  YS SK AI    + MA +
Sbjct: 138 NTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAID 195

Query: 200 LCEYGIRINCISPFAIPT---PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           + +  I +N ++P  I T     V  E       +    + E              P DI
Sbjct: 196 MADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 255

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGFT 283
           A    +LAS+D  +V+G  + +DGG  
Sbjct: 256 ARVVCFLASNDGGWVTGKVIGIDGGAC 282

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  186 bits (474), Expect = 4e-58
 Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 16/257 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIACD 88
           +  +V ++TGA+ GIG+  A +    GA V I        +  A+E   LG     + CD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 89  VTKESDVSDAVDFTIS-KHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQVMRINV 142
            ++ES+V    +     +  +LD++ NNA    +T  +       +    ++D +  + +
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           RG      +  R+M+P   G I+  +S    L  +    Y V K+A   L    A EL  
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHELRR 181

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +G+    + P  + T     E+ + +   +      ++        +           + 
Sbjct: 182 HGVSCVSLWPGIVQT-----ELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVA 236

Query: 263 LASD-DAKYVSGHNLVV 278
           LA+D +   +SG  L  
Sbjct: 237 LATDPNILSLSGKVLPS 253

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  186 bits (474), Expect = 5e-58
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 18  AERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAK 76
            +  +  L  +S     KVA++TGA+ GIG A AA+  S+G  VVI         ++ A 
Sbjct: 11  VDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG 70

Query: 77  EL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV 133
           ++   G  A     DV+  + V             +D++ NNAG+   T   I +    V
Sbjct: 71  KIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTT--IAETGDAV 128

Query: 134 FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
           FD+V+ +N++G    ++ + + +  R  G I+  ++    L   +   Y+ +K+ +  + 
Sbjct: 129 FDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMT 186

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
             ++ EL    I +N ++P    T     ++   +    +  + +       L      P
Sbjct: 187 HVLSKELRGRDITVNAVAPGPTAT-----DL---FLEGKSDEVRDRFAKLAPL-ERLGTP 237

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGGF 282
            DIA A  +LA  D  +V+G  L  +GG 
Sbjct: 238 QDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  185 bits (472), Expect = 6e-58
 Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 37/267 (13%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           ++ + VA++TG ASG+G AT  + +  GA+VV+ DI+   G+    +LG  A F A DVT
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVT 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
            E+ V+ A+D        L I+ N AG   A +        +L  F +++ IN+ G    
Sbjct: 63  DEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNV 121

Query: 149 IKHSTRVMI--------PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           ++ +   +             G I+ TASV    G + Q  YS SK  ++G+   +A +L
Sbjct: 122 LRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDL 181

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQ-IYAGVDAS-----RLLELVYSTGVLEGTHCEPN 254
             + IR+  I+P    TP ++  + +   A +        RL       G        P+
Sbjct: 182 ASHRIRVMTIAPGLFDTP-LLASLPEEARASLGKQVPHPSRL-------G-------NPD 226

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           +    A+++  +    ++G  + +DG 
Sbjct: 227 EYGALAVHIIENP--MLNGEVIRLDGA 251

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  186 bits (474), Expect = 6e-58
 Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 14/265 (5%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKE---LGPN 81
           S  S+ L  KVAL TGA  GIG+  A +    GA VV+         ++   E   LG  
Sbjct: 13  SDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ 72

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
              I  D++K S+V    D  +S    LD + +N+G+        +++  E+FD+V  +N
Sbjct: 73  GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD--ELEVTQELFDKVFNLN 130

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAEL 200
            RG     +   +    RR G I+ T+S+  ++ G+  H  Y+ SK+A+ G  ++ A + 
Sbjct: 131 TRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 188

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT----HCEPNDI 256
              G+ +NCI+P  + T    E       G       E +   G+           P DI
Sbjct: 189 GAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI-DEGLANMNPLKRIGYPADI 247

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
             A   L  +++++++G  + + GG
Sbjct: 248 GRAVSALCQEESEWINGQVIKLTGG 272

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  184 bits (470), Expect = 2e-57
 Identities = 46/253 (18%), Positives = 91/253 (35%), Gaps = 20/253 (7%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L     LITGA+  +G   A + + +G +V+I+           ++ G  A  +  D +
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--AVALYGDFS 81

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E+ +   +D   ++ + L  + +NA               + F ++  +++        
Sbjct: 82  CETGIMAFIDLLKTQTSSLRAVVHNASE---WLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           H   ++       I+  +      G      Y  +K+ +  L  S AA      +++N I
Sbjct: 139 HCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGI 197

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P  +      ++ +   A   A   L          G       I  +  YL    + Y
Sbjct: 198 APALLMFQ--PKDDAAYRANALAKSAL----------GIEPGAEVIYQSLRYLLD--STY 243

Query: 271 VSGHNLVVDGGFT 283
           V+G  L V+GG  
Sbjct: 244 VTGTTLTVNGGRH 256

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  184 bits (470), Expect = 2e-57
 Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 38/283 (13%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GP 80
            T     E   A+ITG A  IG + A +    G +VV+     +   Q+   EL      
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62

Query: 81  NATFIACDVTKESDVSDA----VDFTISKHNQLDIMYNNAGVACKTP---------RSIV 127
           +A     D++  S + D     +D +     + D++ NNA     TP          +  
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADA 122

Query: 128 DLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-----RRSGCILCTASVTGLLGGLAQHTY 182
                   ++   N    +  I+   R          R+  ++        L       Y
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY 182

Query: 183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE--MSQIYAGVDASRLLELV 240
           +++K A+ GL ++ A EL    IR+N ++P     P  M +    +    V   +     
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE--- 239

Query: 241 YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                   +      IA+A  +L S DA Y++G  L VDGG  
Sbjct: 240 -------AS---AAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  183 bits (468), Expect = 3e-57
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 28/263 (10%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----QQTAKELGPNATFIA 86
               + ALIT    G+GK    K ++ G  V +            ++T K++     F+ 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DVTK+ D+   V+  +S   ++D + NNAG      + +VD   + ++++++ N+  V 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 147 AGIKHSTRVMIPRRSGCI--LCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
             +K    VM  +  G I            G + +  ++ +K  ++ L K++A E  EYG
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG 183

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I  N + P  I     M      E            R            GT     DIA 
Sbjct: 184 ITANMVCPGDIIGE--MKEATIQEARQLKEHNTPIGRS-----------GT---GEDIAR 227

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
              +L  DD+  ++G  + V G 
Sbjct: 228 TISFLCEDDSDMITGTIIEVTGA 250

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  183 bits (468), Expect = 4e-57
 Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 13/265 (4%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPN 81
           +    +L+ KVAL+TG+  GIG A A      GAKVV+         ++   E+   G +
Sbjct: 10  TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD 69

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
           A  I  D+ +  ++    D  ++    LDI  +N+GV       + D+  E FD+V  +N
Sbjct: 70  AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH--LKDVTEEEFDRVFSLN 127

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAEL 200
            RG     + + R +     G I+ T+S T     + +H+ YS SK A+   V+  + + 
Sbjct: 128 TRGQFFVAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDC 185

Query: 201 CEYGIRINCISPFAIPT---PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
            +  I +N ++P    T     V            A +  ++      L   +  P D+A
Sbjct: 186 GDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQDVA 244

Query: 258 NAALYLASDDAKYVSGHNLVVDGGF 282
           N   +L S + ++V+G  L +DGG 
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDGGA 269

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  182 bits (465), Expect = 6e-57
 Identities = 85/267 (31%), Positives = 124/267 (46%), Gaps = 36/267 (13%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
           ++   LE KVAL+TGA+ GIGKA A      GAKV+         Q  +  LG N   +A
Sbjct: 2   SQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRI 140
            +VT    +   +     +   +DI+ NNAG        I   NL      E +  +M  
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAG--------ITRDNLLMRMKEEEWSDIMET 113

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+  +    K   R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KSMA E+
Sbjct: 114 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 173

Query: 201 CEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
              G+ +N ++P  I T   M      E+ +   A V A RL           G    P 
Sbjct: 174 ASRGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRL-----------GD---PR 217

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           +IA+A  +LAS +A Y++G  L V+GG
Sbjct: 218 EIASAVAFLASPEAAYITGETLHVNGG 244

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  182 bits (463), Expect = 1e-56
 Identities = 36/261 (13%), Positives = 79/261 (30%), Gaps = 30/261 (11%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           +   E +  L+ G    +G      F +    V   D+      +  +        +   
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDV-----VENEEASASVIVKMTDS 56

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
            T+++D   A    +    ++D +   AG       +      +  D + + ++      
Sbjct: 57  FTEQADQVTAEVGKLLGDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIR 206
              +T+ +  +  G +    +   L G      Y ++K A+  L +S+A +      G  
Sbjct: 116 SHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 173

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
              + P  + TP   + M +     D S                     +        + 
Sbjct: 174 AIAVLPVTLDTPMNRKSMPEA----DFSSW--------------TPLEFLVETFHDWITG 215

Query: 267 DAKYVSGHNLVV--DGGFTSF 285
           + +  SG  + V    G T  
Sbjct: 216 NKRPNSGSLIQVVTTDGKTEL 236

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  182 bits (465), Expect = 1e-56
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 36/263 (13%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL  + AL+TGA  GIG+A A  F + GA V +   +    ++ A +LG +    + +++
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS 83

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVRG 144
               +    +    +   +DI+ NNAG        I    L      + +D V+ +N+  
Sbjct: 84  DRKSIKQLAEVAEREMEGIDILVNNAG--------ITRDGLFVRMQDQDWDDVLAVNLTA 135

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                +     M+ RR G I+   S+ G++G   Q  Y  +K+ +IG  K++A E+    
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRN 195

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I +NCI+P  I +   M      ++   I A +   R+           G      +IA 
Sbjct: 196 ITVNCIAPGFIKSA--MTDKLNEKQKEAIMAMIPMKRM-----------GI---GEEIAF 239

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           A +YLASD+A Y++G  L ++GG
Sbjct: 240 ATVYLASDEAAYLTGQTLHINGG 262

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  183 bits (467), Expect = 2e-56
 Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 15/258 (5%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATF 84
           +    + A +TG A+G+G     + ++ G KV IADI+     +    L     GP    
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV        A D   ++   + I+ NNAGV    P  I + + + +D ++ +N+ G
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQP--IEESSYDDWDWLLGVNLHG 121

Query: 145 VVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAA 198
           VV G+      M+ R      + G ++ TAS+   L   +   Y+ +K A+ GL +S+  
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHY 181

Query: 199 ELCEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
            L +Y I ++ + P  + +      +       G         V     +     EP+ I
Sbjct: 182 SLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI 241

Query: 257 ANAALYLASDDAKYVSGH 274
               +     +  ++  H
Sbjct: 242 GARVIEAMKANRLHIFSH 259

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  181 bits (463), Expect = 2e-56
 Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 20/262 (7%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNA 82
             S  L  K A +TG + GIG A A +    GA V +  +      Q    E+   G  A
Sbjct: 24  MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRA 83

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
             I  D      +  A+  T+     LDI+ N+AG+    P  + +  +  FD+VM +N 
Sbjct: 84  VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDEVMAVNF 141

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTAS-VTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           R     I+ ++R +     G I+   S +  L+       YS SK+A+ GL K +A +L 
Sbjct: 142 RAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG 199

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
             GI +N + P +  T     +M+            E         G++ EP DIA    
Sbjct: 200 PRGITVNIVHPGSTDT-----DMNP-----ADGDHAEAQRERIAT-GSYGEPQDIAGLVA 248

Query: 262 YLASDDAKYVSGHNLVVDGGFT 283
           +LA    K+V+G +L +DGG  
Sbjct: 249 WLAGPQGKFVTGASLTIDGGAN 270

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  181 bits (461), Expect = 4e-56
 Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 15/273 (5%)

Query: 20  RCSRGLSTESR---KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK 76
             S GL          + +VAL+TGA SGIG   A +    G +V +     +  + T K
Sbjct: 5   HHSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK 64

Query: 77  EL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV 133
           EL   G  A    CDV    ++   V   + ++  +D++ NNAG          +L  E+
Sbjct: 65  ELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA--TAELADEL 122

Query: 134 FDQVMRINVRGVVAGIKHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG 191
           +  V+  N+ GV    K   +   M+ R +G I+  AS  G  G +    YS SK  ++G
Sbjct: 123 WLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVG 182

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV---YSTGVLEG 248
             K++  EL   GI +N + P  + TP  M    + +         E      +  V  G
Sbjct: 183 FTKALGLELARTGITVNAVCPGFVETP--MAASVREHYSDIWEVSTEEAFDRITARVPIG 240

Query: 249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
            + +P+++A    YL    A  V+   L V GG
Sbjct: 241 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  180 bits (459), Expect = 8e-56
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 28  ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNAT 83
                +  V L+TG + GIG A        G +V +    ++         +   G  A 
Sbjct: 20  FQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAV 79

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
            I  DV   +D++        +  +LD + NNAG+    P+ + ++++E  ++++R+NV 
Sbjct: 80  AIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIV-DYPQRVDEMSVERIERMLRVNVT 138

Query: 144 GVVAGIKHSTRVMIPRRS---GCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAE 199
           G +     + R M    S   G I+  +S+  +LG   Q+  Y+ SK+AI      +A E
Sbjct: 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLARE 198

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           +   GIR+N + P  I T     ++    +G    R  E+  S  +       P ++A+A
Sbjct: 199 VAAEGIRVNAVRPGIIET-----DLHA--SGGLPDRAREMAPSVPM--QRAGMPEEVADA 249

Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
            LYL S  A YV+G  L V GG
Sbjct: 250 ILYLLSPSASYVTGSILNVSGG 271

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  180 bits (460), Expect = 9e-56
 Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 39/266 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
             E KVAL+TGA  GIG+  A     + + V+      +       E+   G  ++  A 
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRIN 141
           DV+K+ ++S+ ++  +++H  +DI+ NNAG        I   NL      + ++ V+R N
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAG--------ITRDNLFLRMKNDEWEDVLRTN 152

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +  +    +  ++ MI  R G I+  +S+ GL G + Q  YS SK+ +IG  KS+A EL 
Sbjct: 153 LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA 212

Query: 202 EYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
              I +N I+P  I +   M      +    I + + A R+           GT   P +
Sbjct: 213 SRNITVNAIAPGFISSD--MTDKISEQIKKNIISNIPAGRM-----------GT---PEE 256

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +AN A +L+SD + Y++G   V+DGG
Sbjct: 257 VANLACFLSSDKSGYINGRVFVIDGG 282

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  180 bits (459), Expect = 1e-55
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 10/271 (3%)

Query: 22  SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--- 78
           S  +   S     + A +TG +SGIG A A    + G  V       +        L   
Sbjct: 12  SGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA 71

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           G +    +CDVT   +V  AV   + +   + I+ N+AG          DL+  ++  V+
Sbjct: 72  GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE--TADLDDALWADVL 129

Query: 139 RINVRGVVAGIKHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSM 196
             N+ GV    +   R   M     G I+  AS  G  G +    Y+ SK  ++G  KS+
Sbjct: 130 DTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSV 189

Query: 197 AAELCEYGIRINCISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
             EL + GI +N + P  + TP    + E    + GV    + E   +   L G +  P 
Sbjct: 190 GFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPE 248

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGFTSF 285
           ++A    YL +D A  ++   L V GG  ++
Sbjct: 249 EVAGLVGYLVTDAAASITAQALNVCGGLGNY 279

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  179 bits (456), Expect = 1e-55
 Identities = 60/279 (21%), Positives = 101/279 (36%), Gaps = 59/279 (21%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
            + +I+G A+GIG AT     + G ++V  DI                  +  D++    
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI--------------RDAEVIADLSTAEG 47

Query: 95  VSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
              A+   ++K    +D +   AG+  +T          V   V+ +N  G    +    
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTK---------VLGNVVSVNYFGATELMDAFL 98

Query: 154 RVMIPRRSGCILCTASVTGLL----------------------------GGLAQHTYSVS 185
             +        +  +SV                                       Y+ S
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGV 245
           K+A+   V+  AA   E G+R+N I+P A  TP     + Q  AG+   R  E +     
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETP-----LLQ--AGLQDPRYGESIAKFVP 211

Query: 246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTS 284
             G   EP+++A+   +L S  A YV G  +V+DGG  +
Sbjct: 212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  178 bits (455), Expect = 2e-55
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 40/267 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIA 86
           +L+ K A++TG++ G+GKA A K  + GA +V+           TA+E    G N     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRI 140
            DV    DV + V   +    ++DI+ NNAG        I    L      + +D V+  
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAG--------ITRDTLMLKMSEKDWDDVLNT 113

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N++      K  +++M+ ++SG I+   S+ G++G   Q  Y+ SK+ +IG  KS+A E 
Sbjct: 114 NLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEF 173

Query: 201 CEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
              GI  N ++P  I T   M      +        +   R            GT   P 
Sbjct: 174 AAKGIYCNAVAPGIIKTD--MTDVLPDKVKEMYLNNIPLKRF-----------GT---PE 217

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           ++AN   +LASDD+ Y++G  + +DGG
Sbjct: 218 EVANVVGFLASDDSNYITGQVINIDGG 244

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  179 bits (456), Expect = 2e-55
 Identities = 60/258 (23%), Positives = 124/258 (48%), Gaps = 13/258 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIA 86
           ++ K+A++T  +SG+G A+A +   NGA++++     +  +  A  +     G     +A
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D+ +  D+    +         DI+  + G     P   ++L +E +D+  R+  R  V
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGP--RPGRFMELGVEDWDESYRLLARSAV 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
              + +   M+ +  G ++   SVT L         ++ +  +IG+V+++A EL  +G+ 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 207 INCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           +N + P  I T  V   +++  A   G+     L+ + S   + G   +P ++A+   +L
Sbjct: 182 VNAVLPSLILTDRV-RSLAEERARRSGITVEEALKSMASRIPM-GRVGKPEELASVVAFL 239

Query: 264 ASDDAKYVSGHNLVVDGG 281
           AS+ A +++G  + VDGG
Sbjct: 240 ASEKASFITGAVIPVDGG 257

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  179 bits (456), Expect = 3e-55
 Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 16/261 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATF--I 85
           +L+ K AL+TG+ +GIGKA A   ++ GA V+I   + +   +T KE+    P+A    +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D+  E    D ++    K+ ++DI+ NN G+    P    D+  E + ++  +N+   
Sbjct: 67  VADLGTEQGCQDVIE----KYPKVDILINNLGIF--EPVEYFDIPDEDWFKLFEVNIMSG 120

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V   +   + MI R+ G ++  AS   ++       YS +K+  + L +S+A       +
Sbjct: 121 VRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNV 180

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGV-----DASRLLELVYSTGVLEGTHCEPNDIANAA 260
            +N I P +  T  V   ++ +Y        +A +          +      P +IA+  
Sbjct: 181 TVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV 240

Query: 261 LYLASDDAKYVSGHNLVVDGG 281
            +L+S  +  ++G  L +DGG
Sbjct: 241 TFLSSPLSSAINGSALRIDGG 261

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  177 bits (452), Expect = 5e-55
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 39/266 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
            L EKVAL+TGA+ GIG   A    S GA VV         ++    +   G  A  +  
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRIN 141
           +++    + +      +++  +DI+ NNAG        I   NL      + +  V+  N
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAG--------ITRDNLMMRMSEDEWQSVINTN 113

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +  +    K   R M+ +R G I+   SV G  G   Q  Y  +K+ +IG  KS+A E+ 
Sbjct: 114 LSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA 173

Query: 202 EYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
              I +N ++P  I T   M      E+ S I   + + ++           G    P D
Sbjct: 174 SRNITVNVVAPGFIATD--MTDKLTDEQKSFIATKIPSGQI-----------GE---PKD 217

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           IA A  +LAS++AKY++G  L V+GG
Sbjct: 218 IAAAVAFLASEEAKYITGQTLHVNGG 243

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  178 bits (453), Expect = 5e-55
 Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 48/277 (17%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---------- 78
             +L   +AL+TGA SGIG+A + +    GA V   D+     Q+T + L          
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQ-LDIMYNNAGVACKTPRSIVDLNL------ 131
             N      DV++       ++   +  ++   ++ + AG        I           
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG--------ITQDEFLLHMSE 113

Query: 132 EVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSAII 190
           + +D+V+ +N++G     + + + ++     G I+  +S+ G +G + Q  Y+ SK+ +I
Sbjct: 114 DDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVI 173

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTG 244
           GL ++ A EL  +GIR N + P  I TP  M      + + +I   +    L       G
Sbjct: 174 GLTQTAARELGRHGIRCNSVLPGFIATP--MTQKVPQKVVDKITEMIPMGHL-------G 224

Query: 245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                  +P D+A+   +LAS+D+ Y++G ++ V GG
Sbjct: 225 -------DPEDVADVVAFLASEDSGYITGTSVEVTGG 254

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  177 bits (452), Expect = 1e-54
 Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 39/275 (14%)

Query: 22  SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--- 78
           ++G  +  + L+++VA++TGA+ GIG+A A +    GA V+         +         
Sbjct: 16  TQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA 75

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------E 132
           G        +V   + V   V+ T+ +   L+++ NNAG        I    L      +
Sbjct: 76  GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAG--------ITQDQLAMRMKDD 127

Query: 133 VFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
            +D V+  N++ V    +   R M+  R G I+   SV G  G   Q  Y+ +K+ + G+
Sbjct: 128 EWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM 187

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVL 246
            +++A E+   GI +NC++P  I T   M      E+ + +   +   RL          
Sbjct: 188 TRALAREIGSRGITVNCVAPGFIDTD--MTKGLPQEQQTALKTQIPLGRL---------- 235

Query: 247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
            G+   P DIA+A  +LAS  A Y++G  L V+GG
Sbjct: 236 -GS---PEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  176 bits (448), Expect = 2e-54
 Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 40/267 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIA 86
           KL+ KV+L+TG+  GIG+A A K  S G+ V+I     +  +  A+E+    G  A  + 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRI 140
            ++  E  ++ A +   +  + +DI+ NNAG        I    L        +++V+++
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAG--------ITRDKLFLRMSLLDWEEVLKV 115

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+ G     ++S R MI +R G I+  +SV G  G + Q  YS +K+ +IG  KS+A EL
Sbjct: 116 NLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175

Query: 201 CEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
               + +N ++P  I T   M      E   +    +   R            G+   P 
Sbjct: 176 APRNVLVNAVAPGFIETD--MTAVLSEEIKQKYKEQIPLGRF-----------GS---PE 219

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           ++AN  L+L S+ A Y++G  + V+GG
Sbjct: 220 EVANVVLFLCSELASYITGEVIHVNGG 246

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  176 bits (448), Expect = 2e-54
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 40/263 (15%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
            L  K +LITGA+SGIG A A      G+KV+I+    +  +     L  N T   C++ 
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLA 70

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVRG 144
            +    +     ISK + LDI+  NAG        I    L      + FD+V+ IN++ 
Sbjct: 71  NK----EECSNLISKTSNLDILVCNAG--------ITSDTLAIRMKDQDFDKVIDINLKA 118

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                + + + MI +R G I+  +S+ G+ G   Q  Y  SK+ +IG+ KS++ E+   G
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRG 178

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I +N ++P  I +   M      ++   I   +                G    P D+A 
Sbjct: 179 ITVNAVAPGFIKSD--MTDKLNEKQREAIVQKIPLGTY-----------GI---PEDVAY 222

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
           A  +LAS++A Y++G  L V+GG
Sbjct: 223 AVAFLASNNASYITGQTLHVNGG 245

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  175 bits (447), Expect = 3e-54
 Identities = 87/266 (32%), Positives = 129/266 (48%), Gaps = 40/266 (15%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIAC 87
           L+ KVAL+TGA+ GIG+A A      GA VV+    ++    +   E+   G +A  +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRIN 141
           DV    DV++ V  T+    Q+DI+ NNAG        +   NL      E +D V+  N
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAG--------VTKDNLLMRMKEEEWDTVINTN 113

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           ++GV    K  +R M+ +R G I+  ASV G+ G   Q  Y  +K+ +IGL K+ A EL 
Sbjct: 114 LKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELA 173

Query: 202 EYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
              I +N I+P  I T   M         +++   + A++            G      D
Sbjct: 174 SRNITVNAIAPGFIATD--MTDVLDENIKAEMLKLIPAAQF-----------GE---AQD 217

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           IANA  + ASD +KY++G  L VDGG
Sbjct: 218 IANAVTFFASDQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  175 bits (446), Expect = 4e-54
 Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 40/266 (15%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIAC 87
              K AL+TGA+ GIG++ A +    G  V +     +   +   +E+   G ++  I  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRIN 141
           +V    +V   +   +S+   LD++ NNAG        I   NL      + +D V+  N
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAG--------ITRDNLLMRMKEQEWDDVIDTN 113

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           ++GV   I+ +T  M+ +RSG I+  +SV G +G   Q  Y  +K+ +IGL KS A EL 
Sbjct: 114 LKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELA 173

Query: 202 EYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
             GI +N ++P  I +   M      E   Q+   +  +R            G      D
Sbjct: 174 SRGITVNAVAPGFIVSD--MTDALSDELKEQMLTQIPLARF-----------GQ---DTD 217

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           IAN   +LASD AKY++G  + V+GG
Sbjct: 218 IANTVAFLASDKAKYITGQTIHVNGG 243

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  178 bits (452), Expect = 6e-54
 Identities = 64/278 (23%), Positives = 103/278 (37%), Gaps = 38/278 (13%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-------QQTAKE 77
           +   + +L      ITGA+ GIGKA A K   +GA +VIA    Q            A+E
Sbjct: 36  MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE 95

Query: 78  ---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
              +G  A     DV  E  +S AV+  I K   +DI+ NNA     T    +D   +  
Sbjct: 96  IEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN--TLDTPTKRL 153

Query: 135 DQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT--YSVSKSAIIGL 192
           D +M +N RG     K     +   +   IL  +    L     +    Y+++K  +   
Sbjct: 154 DLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMY 213

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE 252
           V  MA E  +  I +N +     P   +      +  G                     +
Sbjct: 214 VLGMAEEF-KGEIAVNALW----PKTAIHTAAMDMLGGPGIESQCR-------------K 255

Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDG-----GFTSF 285
            + IA+AA  +     K  +G+ ++ +      G  +F
Sbjct: 256 VDIIADAAYSIFQ-KPKSFTGNFVIDENILKEEGIENF 292

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  173 bits (440), Expect = 3e-53
 Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 29/256 (11%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           E+ AL+TG ASG+G+A A    + G +VV+ D++           G +  ++  DVT+E 
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVLDLR---------REGEDLIYVEGDVTREE 52

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGV--ACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           DV  AV     +   L  + + AGV  A K         LE F +V+ +N+ G    ++ 
Sbjct: 53  DVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 152 STRVMI------PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           +   M         + G I+ TASV    G + Q  Y+ SK  ++ L    A EL  +GI
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+  ++P    TP +++ + +        +    + +          P + A   L++  
Sbjct: 172 RVVTVAPGLFDTP-LLQGLPE--------KAKASLAAQVPFPPRLGRPEEYAALVLHILE 222

Query: 266 DDAKYVSGHNLVVDGG 281
           +    ++G  + +DG 
Sbjct: 223 NP--MLNGEVVRLDGA 236

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  172 bits (437), Expect = 7e-53
 Identities = 40/255 (15%), Positives = 87/255 (34%), Gaps = 33/255 (12%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           +     ++ G    +G A    F  NG  V+  D+        A +   +   +  +   
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQADSNILVDGNKNW 53

Query: 92  ESDVSDAVDFTIS--KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
                  ++ T S  + +Q+D ++  AG       +     ++  D +++ +V       
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGS-ASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRI 207
           K +T  +  +  G +  T +   +    +   Y ++K+A+  L  S+AA+         +
Sbjct: 113 KLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
             I P  + TP   + M       D S                   + I+   L   ++ 
Sbjct: 171 LTIMPVTLDTPMNRKWM----PNADHSSW--------------TPLSFISEHLLKWTTET 212

Query: 268 A-KYVSGHNLVVDGG 281
           + +  SG  L +   
Sbjct: 213 SSRPSSGALLKITTE 227

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  172 bits (439), Expect = 1e-52
 Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 9/215 (4%)

Query: 13  SIALLAERCSRGLSTESRK-LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG 71
             +       +G   + RK +  ++ LITGA  GIG+ TA +F    +K+V+ DI     
Sbjct: 9   HSSGRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL 68

Query: 72  QQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD 128
           ++TA +    G        D +   D+  +     ++   + I+ NNAGV       +  
Sbjct: 69  EETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV--YTSDLFA 126

Query: 129 LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA 188
                 ++   +NV       K     M     G I+  AS  G +       Y  SK A
Sbjct: 127 TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA 186

Query: 189 IIGLVKSMAAELCEY---GIRINCISPFAIPTPFV 220
            +G  K++  EL      G++  C+ P  + T F+
Sbjct: 187 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI 221

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  171 bits (436), Expect = 2e-52
 Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 42/275 (15%)

Query: 23  RGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL--- 78
           RG    +  L +++AL+TGA+ GIG+A A +  + GAKV +          +    +   
Sbjct: 17  RGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA 76

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------E 132
           G  A  +  DV++ES+V       I +  +LD++ NNAG        I    L      +
Sbjct: 77  GGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAG--------ITRDTLLLRMKRD 128

Query: 133 VFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
            +  V+ +N+ GV    + + ++M+ +RSG I+  ASV G +G   Q  YS +K+ +IGL
Sbjct: 129 DWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGL 188

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVM-----EEMSQIYAGVDASRLLELVYSTGVLE 247
            K++A EL   GI +N ++P  I T   M      E  ++   +   R            
Sbjct: 189 TKTVAKELASRGITVNAVAPGFIATD--MTSELAAE--KLLEVIPLGRY----------- 233

Query: 248 GTHCEPNDIANAALYLASDD-AKYVSGHNLVVDGG 281
           G      ++A    +LA+D  A Y++G  + +DGG
Sbjct: 234 GE---AAEVAGVVRFLAADPAAAYITGQVINIDGG 265

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  170 bits (433), Expect = 5e-52
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 24/258 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----QQTAKELGPNATFIAC 87
           + +++A +TG   GIG +   +   +G +VV     +        +  K LG +      
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +V        A D   ++  ++D++ NNAG+          +  E +  V+  N+  +  
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV--VFRKMTREDWQAVIDTNLTSLFN 128

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             K     M+ R  G I+  +SV G  G   Q  YS +K+ I G   S+A E+   G+ +
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 188

Query: 208 NCISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           N +SP  I T  V     + + +I A +   RL           G+   P++I +   +L
Sbjct: 189 NTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL-----------GS---PDEIGSIVAWL 234

Query: 264 ASDDAKYVSGHNLVVDGG 281
           AS+++ + +G +  ++GG
Sbjct: 235 ASEESGFSTGADFSLNGG 252

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  170 bits (432), Expect = 5e-52
 Identities = 76/274 (27%), Positives = 112/274 (40%), Gaps = 46/274 (16%)

Query: 20  RCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG 79
             S GL   S     +  L+TG   GIG A A  F   G KV I           + E  
Sbjct: 9   HHSSGLVPRS--HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITY--------RSGEPP 58

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EV 133
                + CD+T    V  A       H  ++++  NAG        +    L      E 
Sbjct: 59  EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG--------VTKDQLLMRMSEED 110

Query: 134 FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
           F  V+  N+ G    +K + R M+  + G ++  +SV GLLG   Q  Y+ SK+ ++G  
Sbjct: 111 FTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFA 170

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLE 247
           +S+A EL    I  N ++P  + T   M      E+ + I + V   R            
Sbjct: 171 RSLARELGSRNITFNVVAPGFVDTD--MTKVLTDEQRANIVSQVPLGRY----------- 217

Query: 248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                P +IA    +LASDDA Y++G  + VDGG
Sbjct: 218 ---ARPEEIAATVRFLASDDASYITGAVIPVDGG 248

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  168 bits (429), Expect = 1e-51
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 41/264 (15%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GPNATFIACDV 89
           + ALITGA+ GIG+A A +   +G  + I   Q++   ++ A+E      P    +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVR 143
            +    +  V         LD + NNAG        I    L      E ++ V+  N+ 
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAG--------ITRDTLLVRMKDEDWEAVLEANLS 113

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
            V    + + ++M+  R G I+   SV G+LG   Q  Y  SK+ +IG  +++A E  + 
Sbjct: 114 AVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQR 173

Query: 204 GIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA 257
           GI +N ++P  I T   M      E        + A R            G    P ++A
Sbjct: 174 GITVNAVAPGFIETE--MTERLPQEVKEAYLKQIPAGRF-----------GR---PEEVA 217

Query: 258 NAALYLASDDAKYVSGHNLVVDGG 281
            A  +L S+ A Y++G  L VDGG
Sbjct: 218 EAVAFLVSEKAGYITGQTLCVDGG 241

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  169 bits (431), Expect = 1e-51
 Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----QQTAKELGPN 81
                   ++VA +TG   G+G A + +    G  V ++  +            ++ G +
Sbjct: 17  QGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRD 76

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
               A DV          +  ++   ++D++ NNAG+      + + +    +D VMR +
Sbjct: 77  FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDA--TFMKMTKGDWDAVMRTD 134

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +  +    K     M+ RR G I+   SV G  G   Q  Y+ +K+ I G  K++A E  
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194

Query: 202 EYGIRINCISPFAIPTPFVM---EEM--SQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           + GI +N +SP  + T  V    +++  ++I   +   RL           G    P+++
Sbjct: 195 KRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRL-----------GR---PDEV 240

Query: 257 ANAALYLASDDAKYVSGHNLVVDGG 281
           A    +L SDDA +V+G +L ++GG
Sbjct: 241 AALIAFLCSDDAGFVTGADLAINGG 265

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  168 bits (428), Expect = 2e-51
 Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 44/263 (16%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
               +  L+TG   GIG A A +  ++G KV +                     +  DVT
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--------RGSGAPKGLFGVEVDVT 63

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVRG 144
               V  A          ++++ +NAG        +           E F++V+  N+ G
Sbjct: 64  DSDAVDRAFTAVEEHQGPVEVLVSNAG--------LSADAFLMRMTEEKFEKVINANLTG 115

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                + ++R M   + G ++   SV+GL G   Q  Y+ SK+ +IG+ +S+A EL +  
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 175

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           +  N ++P  I T   M               + A R+                P ++A 
Sbjct: 176 VTANVVAPGYIDTD--MTRALDERIQQGALQFIPAKRV--------------GTPAEVAG 219

Query: 259 AALYLASDDAKYVSGHNLVVDGG 281
              +LAS+DA Y+SG  + VDGG
Sbjct: 220 VVSFLASEDASYISGAVIPVDGG 242

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  168 bits (427), Expect = 3e-51
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 41/264 (15%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL---GPNATFIACDVT 90
            V ++TGA+ GIGKA A      G KV++   +     ++ +K++   G  A     DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRINVRG 144
           KE+DV   +   I     +D++ NNAG        I    L        +D+V+ +N+ G
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAG--------ITRDTLLIRMKKSQWDEVIDLNLTG 113

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V    + +T++M+ +R G I+  ASV GL+G + Q  Y+ +K+ +IG  K+ A E     
Sbjct: 114 VFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRN 173

Query: 205 IRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN 258
           I +N + P  I +   M      +   +I   +   R            G    P ++A 
Sbjct: 174 INVNVVCPGFIASD--MTAKLGEDMEKKILGTIPLGRT-----------GQ---PENVAG 217

Query: 259 AALYLA-SDDAKYVSGHNLVVDGG 281
              +LA S  A Y++G    +DGG
Sbjct: 218 LVEFLALSPAASYITGQAFTIDGG 241

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  167 bits (425), Expect = 4e-51
 Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 24/235 (10%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +  +   LITGA+ GIG+ATA    + G +V +     +  Q  A EL   A  +  DV 
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVR 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           +E D + AV        +L  + NNAGV    P  + +L LE +  V+  N+ G   GI+
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKP--VHELTLEEWRLVLDTNLTGAFLGIR 118

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           H+   ++ R  G I+   S+ G         Y+ SK  ++GL  +   +L E  +R+  +
Sbjct: 119 HAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNV 178

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
            P ++ T F                                +P D+A A L+   
Sbjct: 179 LPGSVDTGFA----GNTPGQAWKL-----------------KPEDVAQAVLFALE 212

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  166 bits (422), Expect = 2e-50
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA--------KELGP 80
           +  L+ KVAL+TGA+ GIG+A A +  ++GA V I    H   ++          +  G 
Sbjct: 2   NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAI----HYGNRKEEAEETVYEIQSNGG 57

Query: 81  NATFIACDVTKESDVSDAVDFTISK------HNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
           +A  I  ++     V        ++        + DI+ NNAG+       I +   + F
Sbjct: 58  SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFF 115

Query: 135 DQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
           D+++ +N +     I+ +   +  R +  I+  +S    +       YS++K AI  +  
Sbjct: 116 DRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTF 173

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
           ++A +L   GI +N I P  + T     +M+     +    + +   +         E  
Sbjct: 174 TLAKQLGARGITVNAILPGFVKT-----DMNA--ELLSDPMMKQYATTISAF-NRLGEVE 225

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           DIA+ A +LAS D+++V+G  + V GG
Sbjct: 226 DIADTAAFLASPDSRWVTGQLIDVSGG 252

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  167 bits (424), Expect = 2e-50
 Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 9/205 (4%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFI 85
             L+ K  ++TGA+ GIG+  A      GA VV+     +  Q+           +A +I
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           A  +   +     V         LD++  N      T  ++   ++    + M +N    
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFLSY 141

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG- 204
           V     +   M+ + +G I+  +S+ G +       YS SK A+ G   S+  E      
Sbjct: 142 VVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 200

Query: 205 -IRINCISPFAIPTPFVMEEMSQIY 228
            + I       I T   M+ +S I 
Sbjct: 201 NVSITLCVLGLIDTETAMKAVSGIV 225

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  164 bits (417), Expect = 1e-49
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 37/259 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           + +K  L+  A+ GIG+A A      GA+V I     +L +++          + CD+  
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY------VVCDLR- 69

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR--SIVDLNLEVFDQVMRINVRGVVAGI 149
                  +D    K  ++DI+  NAG     P+     +L  E F + +      ++  +
Sbjct: 70  -----KDLDLLFEKVKEVDILVLNAGG----PKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           ++    M  +  G I+   S + +      +T + ++ A+ G +K+++ E+  YGI +NC
Sbjct: 121 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 180

Query: 210 ISPFAIPTPFVMEEMS-----QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           ++P    T  V E +S     Q+ + +   R+                P +IA+   +L 
Sbjct: 181 VAPGWTETERVKELLSEEKKKQVESQIPMRRM-----------AK---PEEIASVVAFLC 226

Query: 265 SDDAKYVSGHNLVVDGGFT 283
           S+ A Y++G  +VVDGG +
Sbjct: 227 SEKASYLTGQTIVVDGGLS 245

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  164 bits (418), Expect = 5e-49
 Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 55/295 (18%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GPNATFI 85
                VAL+TGAA  +G++ A    + G  V +   +        +  L      +A  +
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 86  ACDVTKESD-----------------VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD 128
             D++  +                   ++ V    +   + D++ NNA     TP  ++ 
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP--LLR 160

Query: 129 LNLEVFD--------------QVMRINVRGVVAGIKHSTRVMIP------RRSGCILCTA 168
            + +  +               +   N       IK     +          +  I+   
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 169 SVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY 228
                   L    Y+++K A+ GL +S A EL    IR+N + P        M       
Sbjct: 221 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVW-- 278

Query: 229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                      V     L        ++++  ++L S  AKY++G  + VDGG++
Sbjct: 279 -----EGHRSKV----PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  163 bits (415), Expect = 5e-49
 Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 55/295 (18%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL----GPNATFI 85
                VAL+TGAA  +G++ A    + G  V +   +        +  L      +A  +
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 86  ACDVTKESD-----------------VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVD 128
             D++  +                   ++ V    +   + D++ NNA     TP  ++ 
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP--LLR 123

Query: 129 LNLEVFD--------------QVMRINVRGVVAGIKHSTRVMIP------RRSGCILCTA 168
            + +  +               +   N       IK     +          +  I+   
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 169 SVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY 228
                   L    Y+++K A+ GL +S A EL    IR+N + P        M       
Sbjct: 184 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVW-- 241

Query: 229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                      V     L        ++++  ++L S  AKY++G  + VDGG++
Sbjct: 242 -----EGHRSKV----PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  165 bits (419), Expect = 5e-48
 Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 41/267 (15%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI--QHQLGQQTAKELGPNATFIAC 87
           + L+ KVA++TGAA GIG   A  F  +GA VV  D+    +  ++ A ++G  A  +  
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTA--LTL 266

Query: 88  DVTKESDVSDAVDFTISKH-NQLDIMYNNAGVACKTPRSIVDLNL------EVFDQVMRI 140
           DVT +  V          H  ++DI+ NNAG+   T R   D  L      + +D V+ +
Sbjct: 267 DVTADDAVDKITAHVTEHHGGKVDILVNNAGI---T-R---D-KLLANMDEKRWDAVIAV 318

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+       +           G ++  +S+ G+ G   Q  Y+ +K+ +IGL +++A  L
Sbjct: 319 NLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVL 378

Query: 201 CEYGIRINCISPFAIPT------PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
            + GI IN ++P  I T      P    E           +            G    P 
Sbjct: 379 ADKGITINAVAPGFIETKMTEAIPLATRE--VGRRLNSLFQG-----------GQ---PV 422

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGG 281
           D+A    Y AS  +  V+G+ + V G 
Sbjct: 423 DVAELIAYFASPASNAVTGNTIRVCGQ 449

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  161 bits (410), Expect = 6e-48
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 43/273 (15%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----------QQTAKE---L 78
           ++ +V ++TGA  GIG+A A  F + GA+VV+ DI   L           Q    E    
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVM 138
           G  A     +V      +  +   +     LD++ NNAG+     R I + + E FD V+
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV--RDRMIANTSEEEFDAVI 142

Query: 139 RINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
            ++++G  A ++H+               G I+ T+S  GL G + Q  YS +K+ I  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC- 251
               AAE+  YG+ +N I+P A                   +R+ E V++  +       
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPSA------------------RTRMTETVFAEMMATQDQDF 244

Query: 252 ---EPNDIANAALYLASDDAKYVSGHNLVVDGG 281
               P +++   ++L S +A+ V+G    V+GG
Sbjct: 245 DAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  166 bits (422), Expect = 2e-47
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 38/263 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG---------QQTAKE---LG 79
            ++KV +ITGA  G+GK  + +F   GAKVV+ D+   L               E    G
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
             A     +V    D    V+  +     + ++ NNAG+      S+  +  + +  V+ 
Sbjct: 66  GVAVADYNNVL---DGDKIVETAVKNFGTVHVIINNAGIL--RDASMKKMTEKDYKLVID 120

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           +++ G  A  K +      ++ G I+ T+S  GL G   Q  Y+ +KSA++G  +++A E
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKE 180

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
             +Y I+ N I+P A                   SR+ E +    +LE     P  +A  
Sbjct: 181 GAKYNIKANAIAPLA------------------RSRMTESIMPPPMLEKLG--PEKVAPL 220

Query: 260 ALYLASDDAKYVSGHNLVVDGGF 282
            LYL+S +   ++G    V  GF
Sbjct: 221 VLYLSSAEN-ELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  152 bits (386), Expect = 2e-42
 Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)

Query: 6   LSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD 65
           L+    ++        +      +  L++KV LITGA +G+GK  A  F   GAKVV+ D
Sbjct: 294 LNDYATLTNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVND 353

Query: 66  IQHQLGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT 122
            +     +T  E    G  A     DV K  D    +   I K+  +DI+ NNAG+    
Sbjct: 354 FKD--ATKTVDEIKAAGGEAWPDQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGIL--R 407

Query: 123 PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY 182
            RS   ++ + +D V ++++ G     + +    + ++ G I+   S +G+ G   Q  Y
Sbjct: 408 DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANY 467

Query: 183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS 242
           S SK+ I+GL K+MA E  +  I++N ++P A                   + +   +  
Sbjct: 468 SSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA------------------ETAMTLSIMR 509

Query: 243 TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
                      + +A   +YL +DD   V+G    + GG
Sbjct: 510 EQDKN--LYHADQVAPLLVYLGTDDV-PVTGETFEIGGG 545

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  157 bits (399), Expect = 4e-47
 Identities = 51/234 (21%), Positives = 86/234 (36%), Gaps = 21/234 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L++K+A++TGA  G+G         +     +      L    A+  G     I  D+ K
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEG--VEPIESDIVK 59

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E      VD  +   + +D + + A VA  T   I   ++  +   + +NV       + 
Sbjct: 60  EVLEEGGVD-KLKNLDHVDTLVHAAAVARDTT--IEAGSVAEWHAHLDLNVIVPAELSRQ 116

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               +    SGC++   S  G         Y+ SK A+ GL  +   E    GIR++ +S
Sbjct: 117 LLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVS 175

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           P    TP +   M            +              EP +IANA  ++  
Sbjct: 176 PGPTNTPMLQGLMDSQGTNFRPEIYI--------------EPKEIANAIRFVID 215

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  159 bits (403), Expect = 7e-47
 Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 44/270 (16%)

Query: 27  TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA 86
               + + +V L+TGA  G+G+A A  F   GA VV+ D    LG         ++   A
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVND----LGGDFKGVGKGSS--AA 55

Query: 87  CDVTKE------------SDVSDA---VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNL 131
             V +E              V      V   +    ++D++ NNAG+     RS   ++ 
Sbjct: 56  DKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL--RDRSFSRISD 113

Query: 132 EVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG 191
           E +D + R+++RG     + +   M  +  G I+ TAS +G+ G   Q  YS +K  ++G
Sbjct: 114 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLG 173

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC 251
           L  ++  E  +  I  N I+P A                   SR+ E V    ++E    
Sbjct: 174 LANTLVIEGRKNNIHCNTIAPNA------------------GSRMTETVMPEDLVEAL-- 213

Query: 252 EPNDIANAALYLASDDAKYVSGHNLVVDGG 281
           +P  +A   L+L  +     +G    V  G
Sbjct: 214 KPEYVAPLVLWLCHESC-EENGGLFEVGAG 242

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  149 bits (380), Expect = 2e-44
 Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 39/243 (16%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACD 88
           E KVA+ITGA+ GIG+A A     +G  + +     D   ++  +  +E G    +   D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+K   V +     + +   +D++  NAG+       + +L+ E F +++ +N+ GV   
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR--LEELSEEEFHEMIEVNLLGVWRT 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT------YSVSKSAIIGLVKSMAAELCE 202
           +K     +       ++ T+ V       +         Y  +K A   LV++   E   
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDV-------SARLIPYGGGYVSTKWAARALVRTFQIE--N 169

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
             +R   + P A+ T F                 L              +P++IA A   
Sbjct: 170 PDVRFFELRPGAVDTYFG----GSKPGKPKEKGYL--------------KPDEIAEAVRC 211

Query: 263 LAS 265
           L  
Sbjct: 212 LLK 214

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  150 bits (381), Expect = 2e-44
 Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 25/266 (9%)

Query: 29  SRKLEEKVALITGAASGIGKATA---AKFISNGAKVVIADIQHQLGQQTAKEL-----GP 80
           +  L   V ++TGA+ G G+A A   A+ +S G+ ++++     + +Q  +EL       
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 81  NATFIACDVTKESDVSDAVDFTISKHN----QLDIMYNNAGVACKTPR-SIVDLNLEVFD 135
                A D+  E+ V   +            Q  ++ NNA       +  +   +L   +
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 136 QVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
               +N+  ++     +          S  ++  +S+  L        Y   K+A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
           + +AAE  E  +R+   +P  +                  S+L +L       +G   + 
Sbjct: 181 QVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL-----KSDGALVDC 233

Query: 254 NDIANAALYLASDDAKYVSGHNLVVD 279
              A   L L   D  + SG    VD
Sbjct: 234 GTSAQKLLGLLQKDT-FQSGA--HVD 256

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  141 bits (359), Expect = 4e-41
 Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 25/245 (10%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA--------DIQHQLGQQTAKELGP 80
              L+ KVALITGA+SGIG+ATA    + GA V IA         +  +L        G 
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-----GA 56

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
               +  DV     V  AV  T+     LDI+ NNAG+    P  + D +   + +++  
Sbjct: 57  KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP--VEDADTTDWTRMIDT 114

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL 200
           N+ G++   + +   ++ R  G ++  +S+ G +       Y  +K  +    +++  E+
Sbjct: 115 NLLGLMYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEV 173

Query: 201 CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
            E G+R+  I P    T    E    I          + +     L     +  DIA A 
Sbjct: 174 TERGVRVVVIEPGTTDT----ELRGHITHTATKEMYEQRISQIRKL-----QAQDIAEAV 224

Query: 261 LYLAS 265
            Y  +
Sbjct: 225 RYAVT 229

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  142 bits (359), Expect = 9e-41
 Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 23/246 (9%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQ-TAKELGPNATFI 85
           +  +++AL+TGA+ GIG A A   +  G KVV          +L  +  +          
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            CD++ E D+        S+H+ +DI  NNAG+A      ++  +   +  +  +NV  +
Sbjct: 89  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLAL 146

Query: 146 VAGIKHSTRVMIPRR--SGCILCTASVTGLLG--GLAQHTYSVSKSAIIGLVKSMAAELC 201
               + + + M  R    G I+   S++G         H YS +K A+  L + +  EL 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206

Query: 202 EYG--IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           E    IR  CISP  + T     + +      D  +          L     +P D+A A
Sbjct: 207 EAQTHIRATCISPGVVET-----QFAFKLHDKDPEKAAATYEQMKCL-----KPEDVAEA 256

Query: 260 ALYLAS 265
            +Y+ S
Sbjct: 257 VIYVLS 262

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  148 bits (374), Expect = 1e-40
 Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 38/265 (14%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADI---------QHQLGQQTAKE---LG 79
            + +VA++TGA +G+G+  A  F   GAKVV+ D+           +       E    G
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 80  PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR 139
             A      V    D +  ++  I    ++DI+ NNAG+     RS+V  + + ++ V  
Sbjct: 77  GEAVADYNSVI---DGAKVIETAIKAFGRVDILVNNAGIL--RDRSLVKTSEQDWNLVND 131

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
           ++++G     + +   M  +  G I+ T+S +G+ G   Q  Y+ +K  +IGL  ++A E
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIE 191

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
                +  N I P A                  ASR+ E +    +      +P  IA  
Sbjct: 192 GARNNVLCNVIVPTA------------------ASRMTEGILPDILFN--ELKPKLIAPV 231

Query: 260 ALYLASDDAKYVSGHNLVVDGGFTS 284
             YL  +  +  +G  +    G+ +
Sbjct: 232 VAYLCHESCE-DNGSYIESAAGWAT 255

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  139 bits (353), Expect = 4e-40
 Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 21/241 (8%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATF 84
            R   +K+ +ITGA+SGIG+A A +F   G  +++     +    L         PN   
Sbjct: 11  GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-------LPNTLC 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
              DVT +     A+      +   D + NNAG+       I       + ++  +NV G
Sbjct: 64  AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ--IDTQEANEWQRMFDVNVLG 121

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           ++ G++     M  R  G I+  +S+ G         Y  +K A+  + +++  E+    
Sbjct: 122 LLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASN 181

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +R+  I+P A+ T    E +S   +        +         G     +D+A A L+  
Sbjct: 182 VRVMTIAPSAVKT----ELLSHTTSQQIKDG-YDAWRVDM---GGVLAADDVARAVLFAY 233

Query: 265 S 265
            
Sbjct: 234 Q 234

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  139 bits (352), Expect = 6e-40
 Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 28/242 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIA--------DIQHQLGQQTAKELGPNAT 83
           + +KV LITGA+ GIG+  A +    GAK+++          I  ++        G  A 
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-----GGTAL 56

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
               DVT    V+      +    ++D++ NNAGV   +P  +  + ++ +++++ +N++
Sbjct: 57  AQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP--LAAVKVDEWERMIDVNIK 114

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           GV+ GI     +M  +RSG I+   S+  L        Y  +K A+  +   +  E    
Sbjct: 115 GVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--ST 172

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            IR+ C++P  + +     E++      +    ++  Y    L     +P DIA A   +
Sbjct: 173 NIRVTCVNPGVVES-----ELAGTITHEETMAAMD-TYRAIAL-----QPADIARAVRQV 221

Query: 264 AS 265
             
Sbjct: 222 IE 223

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  136 bits (346), Expect = 2e-39
 Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 6/185 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
            + +ITGA+SG+G   A  + + G    +              L  N  + A D+    +
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQE 61

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           V    +      +    + ++AG        + + + E    ++  N+   +  ++   +
Sbjct: 62  VEQLFE---QLDSIPSTVVHSAGSGYFGL--LQEQDPEQIQTLIENNLSSAINVLRELVK 116

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
               +    ++   S         + TY   K A+ GL++S+  EL    ++I  + P  
Sbjct: 117 RYKDQPVN-VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175

Query: 215 IPTPF 219
           + T F
Sbjct: 176 MATEF 180

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  134 bits (341), Expect = 2e-38
 Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 20/235 (8%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTK 91
           + L+TGA +G G+    +FI  G KV+      +   +L      ELG N      DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL----KDELGDNLYIAQLDVRN 57

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + + + +    ++   +DI+ NNAG+A          ++E ++ ++  N +G+V   + 
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLA-LGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M+ R  G I+   S  G       + Y  +K+ +     ++  +L    +R+  I 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIANAALYLAS 265
           P  +       E S +    D  +  +  Y     + T    P D++ A  ++++
Sbjct: 177 PGLVGG----TEFSNVRFKGDDGKAEK-TY-----QNTVALTPEDVSEAVWWVST 221

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  133 bits (336), Expect = 3e-38
 Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 26/199 (13%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
              L+ GA+  +G A   +     A+V+ A              G ++  +  D+T    
Sbjct: 4   MKILLIGASGTLGSAVKERL-EKKAEVITA--------------GRHSGDVTVDITNIDS 48

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
           +    +    +  ++D + +  G A  +P  + +L  E     +   + G +  +     
Sbjct: 49  IKKMYE----QVGKVDAIVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLVLLGID 102

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA 214
            +     G    T  +      +   + +++  A+    KS A E+   GIRIN +SP  
Sbjct: 103 SL--NDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNV 159

Query: 215 IPTPFVMEEMSQIYAGVDA 233
           +      +++   + G   
Sbjct: 160 LEES--WDKLEPFFEGFLP 176

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  131 bits (333), Expect = 9e-38
 Identities = 31/183 (16%), Positives = 75/183 (40%), Gaps = 14/183 (7%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
            LITGA  G+G A A      G  ++++  +     + A+E+G  A  +  D+  E +  
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVG--ARALPADLADELEAK 58

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
             ++    +   LD++ +  G A     S+ +   ++ ++++  ++      +KH     
Sbjct: 59  ALLE----EAGPLDLLVHAVGKA--GRASVREAGRDLVEEMLAAHLLTAAFVLKH----A 108

Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
             ++    +   +    +       Y+ +K A+   +++   EL   G+ +  +   A+ 
Sbjct: 109 RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVA 168

Query: 217 TPF 219
           T  
Sbjct: 169 TGL 171

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  132 bits (334), Expect = 5e-37
 Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 39/258 (15%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNG---AKVVIA--------DIQHQLGQQT 74
              + +L +K  LITGA++GIGKATA +++       K+++A        +++  +    
Sbjct: 25  RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID--- 81

Query: 75  AKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF 134
            +           D+T+   +   ++    +   +DI+ NNAG A      +  +  E  
Sbjct: 82  QEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA-LGSDRVGQIATEDI 140

Query: 135 DQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK 194
             V   NV  ++   +    +   + SG I+   S+ G         Y  SK A+     
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD 200

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVM-------EEMSQIYAGVDASRLLELVYSTGVLE 247
           S+  EL    IR+  I+P  + T F +       E+   +Y                   
Sbjct: 201 SLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP-------------- 246

Query: 248 GTHCEPNDIANAALYLAS 265
                 +D+A+  +Y  S
Sbjct: 247 ---LMADDVADLIVYATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  130 bits (329), Expect = 2e-36
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 36/249 (14%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATF-- 84
                   ITGA SG G+A A +F   G  +V+     +    L    A EL        
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL----AGELSAKTRVLP 73

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV   + +S AVD    +   L  + NNAG+A  T       +L+ +D ++  N++G
Sbjct: 74  LTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTD-PAQSCDLDDWDTMVDTNIKG 132

Query: 145 VVAGIKHSTRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
           ++   +     +I   +G  I+   SV G       H Y  +K+ +     ++  +L   
Sbjct: 133 LLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 204 GIRINCISPFAIPTPFVM-------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           G+R+  + P    + F +           + YAG        +             P DI
Sbjct: 193 GVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHP-----IQ------------PEDI 235

Query: 257 ANAALYLAS 265
           A    ++ +
Sbjct: 236 AETIFWIMN 244

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  121 bits (306), Expect = 1e-32
 Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVV--------IADIQHQLGQQTAKELGPNATF 84
            +K+ LITGA+SG G+ TA      G +V               +     A++   +   
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DV  +  V  A+D  I +  ++D++ +NAG     P        E F ++  INV  
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGP--AEAFTPEQFAELYDINVLS 121

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEY 203
                + +   M  ++ G ++  +S +   G       Y  +K+A+  +    A EL  +
Sbjct: 122 TQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRW 181

Query: 204 GIRINCISPFAIPTPF 219
           GI  + I P A  +  
Sbjct: 182 GIETSIIVPGAFTSGT 197

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  120 bits (303), Expect = 1e-32
 Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 2/227 (0%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
            KV L+TGA+SG G+A A   ++ G  V+    + +            A  I+ DVT   
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGE 64

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            +       ++++ ++D++ NNAG          +        +  ++V G     +   
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFGPARLTRALL 122

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
             M  R SG ++  +S  G L       YS +K+A+  L + +A E+  +GI++  + P 
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182

Query: 214 AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           A  T    +  +       A           V      +P D A AA
Sbjct: 183 AFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAA 229

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  110 bits (276), Expect = 2e-28
 Identities = 57/324 (17%), Positives = 104/324 (32%), Gaps = 103/324 (31%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPN 81
           +  +   + + A++TG   GIG     +  SNG  VV+       G +  ++L      N
Sbjct: 4   TCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN 63

Query: 82  ATFIACDVTKESD-VSDAVDFTISKHNQLDIMYNNAGVACKTP----------------- 123
             F   DVT     +S   DF  +   +LDI+ NNAGVA  +                  
Sbjct: 64  VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSE 123

Query: 124 -----------RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG 172
                      + ++    E+ ++ ++IN  GV +  +    ++    S  I+  +S TG
Sbjct: 124 ELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTG 183

Query: 173 LLGGLAQHT-------------------------------------------YSVSKSAI 189
            L  ++  T                                           Y+ SK+ +
Sbjct: 184 SLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACL 243

Query: 190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT 249
               + +A ++     ++NC+ P  + T                    E+ Y  G     
Sbjct: 244 NAYTRVLANKI--PKFQVNCVCPGLVKT--------------------EMNYGIGNY--- 278

Query: 250 HCEPNDIANAALYLASDDAKYVSG 273
                + A   + +A       SG
Sbjct: 279 --TAEEGAEHVVRIALFPDDGPSG 300

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  108 bits (271), Expect = 1e-27
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 13/194 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAK--VVIA-----DIQHQLGQQTAKELGPNATF--I 85
            V LITG +SGIG   A +  S+ ++   V A       Q +L +       P  +   +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV     V+ A +       ++D++  NAG+       +  L  +    V+ +NV G 
Sbjct: 63  QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLG--LLGPLEALGEDAVASVLDVNVVGT 118

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 206 RINCISPFAIPTPF 219
            ++ I    + T F
Sbjct: 179 HLSLIECGPVHTAF 192

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 98.6 bits (246), Expect = 1e-24
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 29/203 (14%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKV-VIADIQHQLGQQTAKEL-GPNATFIACDVTKE 92
              ++TGA  GIG     + + +     +IA  +        K +       +   VT +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 93  SDVSDAVDFTISKH--NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV---- 146
             +   V         + L ++ NNAGV      +  + N  V  + + +N   VV    
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 147 -------AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT----------YSVSKSAI 189
                        +   +      +    +++  LG +  +T          Y +SK+AI
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAV---ITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 190 IGLVKSMAAELCEYGIRINCISP 212
               +++A +L +  + +    P
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCP 202

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 97.8 bits (244), Expect = 3e-24
 Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKV--VIA---DIQHQLGQQTAKELGPNAT 83
            R       LITG   G+G       ++       +     + +     +   +   N  
Sbjct: 16  PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIH 75

Query: 84  FIACDVTKESDVSDAVDF--TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
            +  D+         V     ++K   L++++NNAG+       I  +  +     ++ N
Sbjct: 76  ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI-APKSARITAVRSQELLDTLQTN 134

Query: 142 VRGVVAGIKH--------STRVMIPRRSGCILCTASVTGLLGGLAQHT------YSVSKS 187
               +   K         +                +++ +LG +  +T      Y  SKS
Sbjct: 135 TVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKS 194

Query: 188 AIIGLVKSMAAELCEYGIRINCISP 212
           A+    KS++ +L    I    + P
Sbjct: 195 ALNAATKSLSVDLYPQRIMCVSLHP 219

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 97.1 bits (242), Expect = 7e-24
 Identities = 44/229 (19%), Positives = 72/229 (31%), Gaps = 57/229 (24%)

Query: 35  KVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
            VAL+TG   GIG A            VV+       GQ   ++L   G +  F   D+ 
Sbjct: 5   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 64

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +    DF   ++  LD++ NNAG+A K             +  M+ N  G     +
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPF--HIQAEVTMKTNFFGT----R 118

Query: 151 HSTRVMIP--RRSGCILCTASVTGLLG--------------------------------- 175
                ++P  +  G ++  +S+  +                                   
Sbjct: 119 DVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178

Query: 176 --------GLAQHTYSVSKSAIIGLVKSMAAELCEY----GIRINCISP 212
                   G     Y V+K  +  L +  A +L E      I +N   P
Sbjct: 179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP 227

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 75.4 bits (186), Expect = 5e-16
 Identities = 56/273 (20%), Positives = 104/273 (38%), Gaps = 46/273 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           LE K  +I G A+      G+ K         GAK+V     +   +  ++  ++L    
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQ----LGAKLVFTYRKERSRKELEKLLEQLNQPE 85

Query: 83  TFIA-CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQ 136
             +   DV  + +V +  +        +D +Y++   A             + + E F  
Sbjct: 86  AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFA---NMEDLRGRFSETSREGFLL 142

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAII 190
              I+   +      + ++M     G I+   +  G      +     Y+V   +K+++ 
Sbjct: 143 AQDISSYSLTIVAHEAKKLM--PEGGSIV-ATTYLG-----GEFAVQNYNVMGVAKASLE 194

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGT 249
             VK +A +L    IR+N IS   I T            GV   + +L+ +     L   
Sbjct: 195 ANVKYLALDLGPDNIRVNAISAGPIRTLSA--------KGVGGFNTILKEIEERAPL-KR 245

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
           + +  ++   A YL SD +  V+G N+ VD GF
Sbjct: 246 NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 75.3 bits (186), Expect = 5e-16
 Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 46/273 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           LE +  ++ G A+      GI ++        GA+++     +   +   + A  L  N 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHE----AGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 83  TFIA-CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQ 136
           + I  CDVT ++++         +   +  + +    A    +       ++ N + F  
Sbjct: 61  SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFA---NKEELVGEYLNTNRDGFLL 117

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAII 190
              I+   + A +K +  +M     G I+ T +  G      +     Y+V   +K+++ 
Sbjct: 118 AHNISSYSLTAVVKAARPMM--TEGGSIV-TLTYLG-----GELVMPNYNVMGVAKASLD 169

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGT 249
             VK +AA+L +  IR+N IS   I T            G+ D + +L+ +     L   
Sbjct: 170 ASVKYLAADLGKENIRVNSISAGPIRTLSA--------KGISDFNSILKDIEERAPL-RR 220

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
              P ++ + A +L SD ++ ++G NL VD GF
Sbjct: 221 TTTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 51/276 (18%), Positives = 94/276 (34%), Gaps = 41/276 (14%)

Query: 32  LEEKVALITGAASG--IGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACD 88
           L+ K  L++G  +   I    A      GA++V+       L Q+    L   A  +  D
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 64

Query: 89  VTKESDVSDAVDFTISKH----NQLDIMYNNAGVACKT---PRSIVDLNLEVFDQVMRIN 141
           V  E  +  ++   +++     N+LD + ++ G   +T        D       + + I+
Sbjct: 65  VQNEEHL-ASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 123

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS------------VSKSAI 189
                +  K    +M     G I+                +             V+KSA+
Sbjct: 124 AYSYASMAKALLPIM--NPGGSIVGM-------------DFDPSRAMPAYNWMTVAKSAL 168

Query: 190 IGLVKSMAAELCEYGIRINCISPFAIPT---PFVMEEMSQIYAGVDASRLLELVYSTGVL 246
             + + +A E  +YG+R N ++   I T     ++       AG     L E       +
Sbjct: 169 ESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI 228

Query: 247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
                +   +A     L SD     +G  +  DGG 
Sbjct: 229 GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 74.1 bits (183), Expect = 1e-15
 Identities = 49/269 (18%), Positives = 103/269 (38%), Gaps = 40/269 (14%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L  K AL+ G  +       I           GA+V ++   +      ++ A+ LG   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKE----AGAEVALSYQAERLRPEAEKLAEALGGA- 60

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRI 140
                DVT++ ++             LD + +    A +       +D   + +   + +
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY------SVSKSAIIGLVK 194
           +   +VA  + +  ++  R  G I+ T +        ++         +++K+A+   V+
Sbjct: 121 SAYSLVAVARRAEPLL--REGGGIV-TLTYYA-----SEKVVPKYNVMAIAKAALEASVR 172

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEP 253
            +A EL   G+R+N IS   + T             +   +++ + V  T  L   +   
Sbjct: 173 YLAYELGPKGVRVNAISAGPVRTVAA--------RSIPGFTKMYDRVAQTAPL-RRNITQ 223

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGGF 282
            ++ N  L+L S  A  ++G  + VD G+
Sbjct: 224 EEVGNLGLFLLSPLASGITGEVVYVDAGY 252

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 73.0 bits (180), Expect = 4e-15
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 45/272 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           LE K ALITG A+      GI K+        GA++          +  ++ AK  G + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHR----EGAQLAFTYATPKLEKRVREIAKGFGSDL 74

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQV 137
               CDV+ + D+ +   F       LDI+ ++   A   P+      ++D + E F   
Sbjct: 75  VV-KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYA---PKEEFKGGVIDTSREGFKIA 130

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIG 191
           M I+V  ++A  +    +M   R+G I+ T S  G     A+     Y+V   +K+A+  
Sbjct: 131 MDISVYSLIALTRELLPLM-EGRNGAIV-TLSYYG-----AEKVVPHYNVMGIAKAALES 183

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTH 250
            V+ +A ++ ++G RIN IS   + T             +     L+E         G  
Sbjct: 184 TVRYLAYDIAKHGHRINAISAGPVKTLAA--------YSITGFHLLMEHTTKVNPF-GKP 234

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
               D+ + A++L SD A+ ++G  + VD G+
Sbjct: 235 ITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 72.3 bits (178), Expect = 8e-15
 Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 46/272 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L+ K  LI G A+      GI KA        GA++      D   +  +  A+ELG   
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAARE----AGAELAFTYQGDALKKRVEPLAEELGAF- 83

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQV 137
               CDV   + +    +    K  +LD + +  G +    +       +D +   F   
Sbjct: 84  VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFS---DKDELTGRYIDTSEANFTNT 140

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIG 191
           M I+V  + A  + + ++M     G IL T +  G     A+     Y+V   +K+A+  
Sbjct: 141 MLISVYSLTAVSRRAEKLM--ADGGSIL-TLTYYG-----AEKVMPNYNVMGVAKAALEA 192

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTH 250
            VK +A +L    IR+N IS   I T           +G+ D   +L+       L    
Sbjct: 193 SVKYLAVDLGPQNIRVNAISAGPIKTLAA--------SGIGDFRYILKWNEYNAPL-RRT 243

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
              +++ +  LY  SD ++ V+G     D G+
Sbjct: 244 VTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 46/272 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L+ K  LI G A+      GI ++        GA +      +   +  +  A+EL    
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFN----QGATLAFTYLNESLEKRVRPIAQELNSP- 58

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQV 137
                DV+KE       +        LD + ++   A   P+      +++ +   F+  
Sbjct: 59  YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFA---PKEALEGSLLETSKSAFNTA 115

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIG 191
           M I+V  ++        ++       +L T S  G     +      Y+V   +K+A+  
Sbjct: 116 MEISVYSLIELTNTLKPLL--NNGASVL-TLSYLG-----STKYMAHYNVMGLAKAALES 167

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTH 250
            V+ +A +L ++ IR+N +S   I T           +G+ D   +L+       L   +
Sbjct: 168 AVRYLAVDLGKHHIRVNALSAGPIRTLAS--------SGIADFRMILKWNEINAPL-RKN 218

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
               ++ NA +YL S  +  VSG    VD G+
Sbjct: 219 VSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 41/270 (15%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L  K  LITG  S      GI KA        GA++        + ++ ++   E  P  
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHR----EGAELAFTYVGQFKDRV-EKLCAEFNPA- 77

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACK---TPRSIVDLNLEVFDQVMR 139
             + CDV  + ++ D         + LD + ++   A +       I  +  E F     
Sbjct: 78  AVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHD 137

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIGLV 193
           I+     A  K    +M   R+  ++   +  G     A+     Y+    +K+++   V
Sbjct: 138 ISAYSFAALAKEGRSMM-KNRNASMV-ALTYIG-----AEKAMPSYNTMGVAKASLEATV 190

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCE 252
           +  A  L E GI++N +S   I T           +G+ +  ++L+       L   + +
Sbjct: 191 RYTALALGEDGIKVNAVSAGPIKTLAA--------SGISNFKKMLDYNAMVSPL-KKNVD 241

Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDGGF 282
             ++ N   +L SD A  ++G  + VD G+
Sbjct: 242 IMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 67/272 (24%), Positives = 106/272 (38%), Gaps = 46/272 (16%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           +E K  +I G A+      GI KA  A     GA+V +    +   +     A+ LG   
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCA----QGAEVALTYLSETFKKRVDPLAESLGVKL 83

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVDLNLEVFDQV 137
           T   CDV+    V +       +   LD + +    +    ++      VD +L  F   
Sbjct: 84  TV-PCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFS---DKNELKGRYVDTSLGNFLTS 139

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIG 191
           M I+          +  +M     G IL T S  G     A+     Y+V    K+A+  
Sbjct: 140 MHISCYSFTYIASKAEPLM--TNGGSIL-TLSYYG-----AEKVVPHYNVMGVCKAALEA 191

Query: 192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTH 250
            VK +A +L +  IR+N IS   + T           +G+ D   +L        L   +
Sbjct: 192 SVKYLAVDLGKQQIRVNAISAGPVRTLAS--------SGISDFHYILTWNKYNSPL-RRN 242

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
              +D+  AALYL SD  +  +G  + VD G+
Sbjct: 243 TTLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 69.1 bits (170), Expect = 6e-14
 Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 47/273 (17%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L  K  L+TG AS      GI +A        GA++      D      ++ A +LG + 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHR----EGAELAFTYQNDKLKGRVEEFAAQLGSD- 61

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS-----IVD-LNLEVFDQ 136
             + CDV +++ +            + D   ++ G A   P        V+ +  E F  
Sbjct: 62  IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFA---PGDQLDGDYVNAVTREGFKI 118

Query: 137 VMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAII 190
              I+    VA  K    ++       +L T S  G     A+     Y+V   +K+++ 
Sbjct: 119 AHDISSYSFVAMAKACRSML--NPGSALL-TLSYLG-----AERAIPNYNVMGLAKASLE 170

Query: 191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGT 249
             V+ MA  +   G+R+N IS   I T           +G+ D  ++L    +   +   
Sbjct: 171 ANVRYMANAMGPEGVRVNAISAGPIRTLAA--------SGIKDFRKMLAHCEAVTPI-RR 221

Query: 250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
                D+ N+A +L SD +  +SG  + VDGGF
Sbjct: 222 TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 69.2 bits (170), Expect = 8e-14
 Identities = 64/270 (23%), Positives = 103/270 (38%), Gaps = 41/270 (15%)

Query: 32  LEEKVALITGAAS------GIGKATAAKFISNGAKVVIA---DIQHQLGQQTAKELGPNA 82
           L+ K  L+TG  S      GI KA        GA++      D       + A E G   
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKR----EGAELAFTYVGDRFKDRITEFAAEFGSEL 67

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACK---TPRSIVDLNLEVFDQVMR 139
            F  CDV  ++ +        +  + LD + ++ G A +       +  L  E F     
Sbjct: 68  VF-PCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126

Query: 140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT---YSV---SKSAIIGLV 193
           I+     A  K +  ++       +L T S  G     A+     Y+    +K+A+   V
Sbjct: 127 ISAYSFPALAKAALPML--SDDASLL-TLSYLG-----AERAIPNYNTMGLAKAALEASV 178

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCE 252
           + +A  L   G+R+N IS   I T           +G+    ++L+ V S   L   +  
Sbjct: 179 RYLAVSLGAKGVRVNAISAGPIKTLAA--------SGIKSFGKILDFVESNSPL-KRNVT 229

Query: 253 PNDIANAALYLASDDAKYVSGHNLVVDGGF 282
              + NA  +L SD A  V+   + VD GF
Sbjct: 230 IEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           +  +ITGA SG+G  TA +    GA V++A    + G+  A+ +         D+   S 
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSS 76

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRS 125
           V    D      +  D++ NNAG+    P +
Sbjct: 77  VRRFAD----GVSGADVLINNAGIMA-VPYA 102

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 49/294 (16%), Positives = 106/294 (36%), Gaps = 57/294 (19%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVI---------------------ADIQH 68
           L  K A I G A   G G A A    + GA++++                     + +  
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 69  QLGQQTAKELGPNA------TFIACDVTKESDVSDAVDFTIS--------KHNQLDIMYN 114
                  K++ P          +  DV      + + ++T+             +DI+ +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL 174
           +     +  + +++ + + +   +  +    V+ + H   +M     G  +   S+T + 
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM--NPGGASI---SLTYIA 180

Query: 175 GGLAQHTY----SVSKSAIIGLVKSMAAEL-CEYGIRINCISPFAIPTPFVMEEMSQIYA 229
                  Y    S +K+A+    + +A E   +  IR+N IS   + +            
Sbjct: 181 SERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA--------K 232

Query: 230 GV-DASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
            +     ++E  Y+   ++ T    +++ NAA +L S  A  ++G  + VD G 
Sbjct: 233 AIGFIDTMIEYSYNNAPIQKT-LTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 57.9 bits (140), Expect = 7e-10
 Identities = 51/294 (17%), Positives = 102/294 (34%), Gaps = 51/294 (17%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVI-------------------------- 63
           L  + A + G A   G G A A    S GA+V +                          
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 64  --ADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS--------KHNQLDIMY 113
             + I+                 +  D+      +    +TI             +DI+ 
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPE-DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILV 125

Query: 114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL 173
           ++     +  + +++ + + +      +    V+ ++H   +M     G  +   +++ L
Sbjct: 126 HSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM--NEGGSAV---TLSYL 180

Query: 174 LGGLAQHTY----SVSKSAIIGLVKSMAAEL-CEYGIRINCISPFAIPTPFVMEEMSQIY 228
                   Y    S +K+A+    +++A E   +YG+R+N IS   + +      + +  
Sbjct: 181 AAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS-RAASAIGKSG 239

Query: 229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF 282
                   ++  Y+   L       +D+  AAL+L S  A+ VSG  L VD G 
Sbjct: 240 EKSFIDYAIDYSYNNAPLRRD-LHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 21/172 (12%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIA 86
              ++ K A++      +G  +AA     GA+VV+   +    Q  A  +         A
Sbjct: 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 173

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            +   ++  ++AV            ++    +       +  L    +     I +    
Sbjct: 174 AETADDASRAEAVK-------GAHFVFTAGAIG------LELLPQAAWQNESSIEIVADY 220

Query: 147 AGIKHS-TRVMIPRRSGCILCTASVTGLL--GGLAQHTYSVSKSAIIGLVKS 195
                     +     G         G L  GGL      + ++ I  L +S
Sbjct: 221 NAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK---LKLHRACIAKLFES 269

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 52/306 (16%), Positives = 108/306 (35%), Gaps = 62/306 (20%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVI-------------------------- 63
           L  K A + G A   G G A      + GA+V++                          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 64  --------ADIQHQLGQQTAKELGPNA------TFIACDVTKESDVSDAVDFTIS----- 104
                   A+   +       ++ P          +  +V+     +    FTIS     
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 105 ---KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS 161
                 Q+DI+ ++     +  + ++  + + +   +  +    V+ ++H   +M  +  
Sbjct: 127 VRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM--KEG 184

Query: 162 GCILCTASVTGLLGGLAQHTY----SVSKSAIIGLVKSMAAEL-CEYGIRINCISPFAIP 216
           G  L   +++ +        Y    S +K+A+    +++A E      +R+NCIS   + 
Sbjct: 185 GSAL---ALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241

Query: 217 TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNL 276
           +      + +          ++   +   L+    E +D+  AAL+L S  A+ V+G  L
Sbjct: 242 S-RAASAIGKAGDKTFIDLAIDYSEANAPLQKE-LESDDVGRAALFLLSPLARAVTGATL 299

Query: 277 VVDGGF 282
            VD G 
Sbjct: 300 YVDNGL 305

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 55/222 (24%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           L+TGAA  +G+    +       + +AD+            GPN   + CD+   + V+ 
Sbjct: 7   LVTGAAGQLGRVMRERLAPMAEILRLADL------SPLDPAGPNEECVQCDLADANAVNA 60

Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV--------AGI 149
            V          D + +  G++ + P          F+Q+++ N+ G+          G 
Sbjct: 61  MVA-------GCDGIVHLGGISVEKP----------FEQILQGNIIGLYNLYEAARAHGQ 103

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHT----------YSVSKSAIIGLVKSMAAE 199
               R++    S     +    G      +            Y VSK     L +     
Sbjct: 104 P---RIVFA--S-----SNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD- 152

Query: 200 LCEYGIRINCISPF-AIPTPFVMEEMSQIYAGVDASRLLELV 240
             ++G     +      P P     +S  ++  D   L+E V
Sbjct: 153 --KFGQETALVRIGSCTPEPNNYRMLSTWFSHDDFVSLIEAV 192

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 61/311 (19%), Positives = 98/311 (31%), Gaps = 105/311 (33%)

Query: 35  KVALITGAASG-IGKATAAKFISNGAKVVIADIQHQLGQQT---AKEL-------GPNAT 83
           K  LITGA  G IG       +  GAKVV+     +  +Q     + +       G    
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVT--TSRFSKQVTDYYQSIYAKYGAKGSTLI 534

Query: 84  FIACDVTKESDVSDAVDFTISKHN------QLDIMYNNAGVACKTPRSIVDL--NLEVFD 135
            +  +   + DV   ++F             LD +   A +  +    +  +    E   
Sbjct: 535 VVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAH 593

Query: 136 QVMRINVRGVVAGIKH--STRVMIPRRSGCILCTASVTGLLG--GLAQHTYSVSKS---- 187
           ++M  N+  ++  +K   S R +  R +  IL  +   G  G  G+    YS SK     
Sbjct: 594 RIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGM----YSESKLSLET 649

Query: 188 ------------------AIIGLVKS---------MAAELCEYGIRINCISPFAIPTPFV 220
                             AIIG  +          +A  + + G+R          T F 
Sbjct: 650 LFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVR----------T-FS 698

Query: 221 MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVD- 279
            +EM        A  LL L+ +  V+E     P                      ++ D 
Sbjct: 699 QKEM--------AFNLLGLL-TPEVVELCQKSP----------------------VMADL 727

Query: 280 -GGFTSFKNLK 289
            GG      LK
Sbjct: 728 NGGLQFVPELK 738

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 46.1 bits (109), Expect = 7e-06
 Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 36/136 (26%)

Query: 183 SVSKSAIIGLVKSMAAEL-CEYGIRINCISPFAIPT------------------------ 217
           S +K+A+    + +A  L   Y IRIN IS   + +                        
Sbjct: 187 SSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRN 246

Query: 218 -PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN----------DIANAALYLASD 266
              V   M+      +        Y+       + E            DI + A +L S 
Sbjct: 247 RHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSR 306

Query: 267 DAKYVSGHNLVVDGGF 282
           +++ ++G  + VD G 
Sbjct: 307 ESRAITGQTIYVDNGL 322

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 34   EKVALITGAASGIGKATAAKFISNGAKVVI--------ADIQHQLGQQTAKELGPNATFI 85
             K  +ITG   G G   A      GA+ ++           Q +  ++     G      
Sbjct: 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWR-RQGVQVLVS 1942

Query: 86   ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
              + +        +    ++   +  ++N A V       + +   E F  V +    G 
Sbjct: 1943 TSNASSLDGARSLIT-EATQLGPVGGVFNLAMVL--RDAVLENQTPEFFQDVSKPKYSGT 1999

Query: 146  VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA 188
               +   TR   P     ++  +SV+   G   Q  Y  + SA
Sbjct: 2000 AN-LDRVTREACPELDYFVIF-SSVSCGRGNAGQANYGFANSA 2040

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 23/107 (21%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
           L+TGAA G+G A      +   +V ++DI   LG         +   +ACD+     V D
Sbjct: 6   LVTGAAGGVGSAIRPHLGTLAHEVRLSDI-VDLG-----AAEAHEEIVACDLADAQAVHD 59

Query: 98  AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
            V          D + +  GV+ + P          ++ +++ N+ G
Sbjct: 60  LVK-------DCDGIIHLGGVSVERP----------WNDILQANIIG 89

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 22/109 (20%)

Query: 38  LITGAASGIGKATAAKFISNGAK--VVIADIQHQLGQQTAKELGPNATFIACDVTKESDV 95
           L+TG++  IG            K  V+ +DI         +       FI  DV+   ++
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIASDI--------VQRDTGGIKFITLDVSNRDEI 54

Query: 96  SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
             AV     +   +D +++ AG+   + +   D          ++N+ G
Sbjct: 55  DRAV-----EKYSIDAIFHLAGIL--SAKGEKD-----PALAYKVNMNG 91

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 42/299 (14%), Positives = 86/299 (28%), Gaps = 62/299 (20%)

Query: 35  KVALITGAASGIGKATA-AKFISNGAKVVI---------------ADIQHQLGQQTAKEL 78
           K  L+ GA+SG G A+        GA  +                         + AK  
Sbjct: 62  KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA 121

Query: 79  GPNATFIACDVTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTP-------RSIVDLN 130
           G  +  I  D   ++  +  ++   ++   Q+D++  +     +         RS +   
Sbjct: 122 GLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPI 181

Query: 131 LEVF---------DQVMRINVRGVV-AGIKHSTRVMIP----------RRSGCILCTASV 170
            + +         D +++ ++       I+ +  VM              +G +   A  
Sbjct: 182 GQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARS 241

Query: 171 TGLLGGLAQHTYSVSKSAIIGLVK--------SMAAELCEYGIRINCISPFAIPTPFVME 222
                   + T+ +     +G  K         + A L ++G   N     ++ T     
Sbjct: 242 VAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ---- 297

Query: 223 EMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG 281
             S     +     + +VY     +G H            L  +      G    VD  
Sbjct: 298 -ASAAIPVMPLY--ISMVYKIMKEKGLH---EGTIEQLDRLFRERLYRQDGQPAEVDEQ 350

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	297
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.94
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.92
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.9
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.9
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.89
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.89
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.88
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.87
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.87
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.86
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.85
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.85
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.85
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.85
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.84
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.79
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.77
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.77
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.75
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.74
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.74
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.73
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.73
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.69
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.69
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.64
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.64
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.59
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.31
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.27
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.92
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.73
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.7
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.63
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.61
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.61
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.57
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.57
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.49
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.39
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.39
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.37
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.36
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.34
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.33
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.33
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.32
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.3
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.3
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.22
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.15
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.14
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.08
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.07
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.06
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.06
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.06
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.98
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.96
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.96
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.95
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.93
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.91
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.88
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.86
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.85
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.84
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.8
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.78
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.78
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.76
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.75
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.74
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.73
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.7
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.7
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.68
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.67
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.67
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.66
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.65
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.63
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.6
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.59
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.59
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.56
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.55
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.49
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.44
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.4
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.37
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.34
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.29
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.28
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.28
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.27
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.26
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.21
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.21
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.18
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.17
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.15
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.15
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.15
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.14
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.11
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.1
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.1
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.08
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.07
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.05
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.05
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.04
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.02
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.02
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.01
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.98
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.98
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.98
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.97
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.96
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.96
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.95
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.87
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.82
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.76
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.75
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.74
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.74
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.73
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.71
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.71
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.7
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.7
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.66
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.64
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.64
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.59
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.58
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.58
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.58
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.54
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.54
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.5
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.47
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.47
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.44
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.36
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.29
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.22
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.21
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.16
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.15
1lnq_A	336	MTHK channels, potassium channel related protein;	96.13
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.11
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.1
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.08
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.03
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.03
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.94
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.92
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.91
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.89
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.85
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.83
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.83
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.81
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.8
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.79
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.76
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.75
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.75
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.74
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.72
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.71
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.69
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.68
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.68
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.68
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.65
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.64
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.62
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.58
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.55
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.5
1vm6_A	228	DHPR, dihydrodipicolinate reductase; TM1520, struc	95.5
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.47
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.45
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.44
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.42
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.4
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.4
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.37
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.33
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.27
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.27
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.24
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.24
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.2
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.17
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.16
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.08
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.07

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=8.8e-58  Score=393.56  Aligned_cols=248  Identities=33%  Similarity=0.519  Sum_probs=222.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +||+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999999999999888877765   6789999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.+...+|++||
T Consensus        83 G~iDiLVNNAGi~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 SRIDVLCNNAGIMD-GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             SCCCEEEECCCCCC-TTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             CCCCEEEECCcccC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence            99999999999763 34568899999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +++.+|+|++|.|++++|||||+|+||+|+|++.......     ......... ...++.+|+++|||+|++++||+++
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~-~~~~~~~R~g~pediA~~v~fLaSd  235 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-----SELGMRTLT-KLMSLSSRLAEPEDIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-----CHHHHHHHH-HHHTTCCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-----cHHHHHHHH-hcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999987543211     122222222 2233449999999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      .+.|+|||+|.+|||+++
T Consensus       236 ~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          236 EASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCcCCEEEeCCCccc
Confidence            999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=7.6e-57  Score=387.94  Aligned_cols=246  Identities=29%  Similarity=0.411  Sum_probs=224.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999888877665   678999999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +|++|+||||||+.  ...++.+.+.++|++.+++|+.+++.++|++.|+|.+ ++.|+||++||..+..+.+...+|++
T Consensus        84 ~G~iDiLVNNAG~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (255)
T 4g81_D           84 GIHVDILINNAGIQ--YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTA  161 (255)
T ss_dssp             TCCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             CCCCcEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHH
Confidence            99999999999987  6778999999999999999999999999999999965 46799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||+++.+|+|++|.|++++|||||+|+||+|+|++......       .+...+......|+ +|+++|||+|++++||+
T Consensus       162 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-------~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL~  233 (255)
T 4g81_D          162 AKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-------DKQFDSWVKSSTPS-QRWGRPEELIGTAIFLS  233 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-------CHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-------CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999876542       23334444555666 99999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.|+|||+|.+|||++-
T Consensus       234 S~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          234 SKASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhCCCcCCEEEECCCeEe
Confidence            99999999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.6e-55  Score=383.11  Aligned_cols=247  Identities=29%  Similarity=0.446  Sum_probs=218.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..++++.++..+++|++|+++++++++++.+++|++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|++  .|++|++||..+..+.+...+|++||+++.
T Consensus       106 iLVNNAG~~--~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~  181 (273)
T 4fgs_A          106 VLFVNAGGG--SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALR  181 (273)
T ss_dssp             EEEECCCCC--CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCC--CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHH
Confidence            999999987  6778999999999999999999999999999999964  589999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      +|+|+++.|++++|||||+|+||+|+|+++.+.......  ..+...+......|+ +|+++|||||++++||+++.++|
T Consensus       182 ~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~--~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~FLaSd~a~~  258 (273)
T 4fgs_A          182 SFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPV--QQQGLLNALAAQVPM-GRVGRAEEVAAAALFLASDDSSF  258 (273)
T ss_dssp             HHHHHHHHHTTTSCEEEEEEEECSBCC---------CHH--HHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCch--hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999987655332110  122233334455566 99999999999999999999999


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      +|||+|.+|||++.
T Consensus       259 iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          259 VTGAELFVDGGSAQ  272 (273)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             ccCCeEeECcChhh
Confidence            99999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.4e-54  Score=375.21  Aligned_cols=254  Identities=27%  Similarity=0.364  Sum_probs=216.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT--AKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~--~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+..+..  ..+.+.++.++.+|++|+++++++++++.++|
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999988764432  23336789999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|+||||||+.  ... ..+.+.++|++.+++|+.+++.++++++|+|+++ +|+||++||..+..+.+...+|++||
T Consensus        82 G~iDiLVNnAGi~--~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           82 GRLDGLVNNAGVN--DGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             SCCCEEEECCCCC--CCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCC--CCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999986  332 4478999999999999999999999999999754 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +++.+|+|+++.|++++|||||+|+||+|+|++.+.......   ..+..........|+.+|+.+|||+|++++||+++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~  234 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFE---DPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSP  234 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhccc---ChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999876543211   11222233444455546899999999999999999


Q ss_pred             CCCcccccEEEecCCcccccCCC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      .++|+|||+|.+|||++...+..
T Consensus       235 ~a~~iTG~~i~VDGG~T~l~~s~  257 (258)
T 4gkb_A          235 RASHTTGEWLFVDGGYTHLDRAL  257 (258)
T ss_dssp             GGTTCCSCEEEESTTTTTSCTTC
T ss_pred             hhcCccCCeEEECCCcchhhhhh
Confidence            99999999999999999876654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-54  Score=371.11  Aligned_cols=241  Identities=29%  Similarity=0.404  Sum_probs=213.2

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++|+||+++||||++|||+++|++|+++|++|++++|+.+ ...+..++.+.++..+++|++|+++++++++     ++
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g   78 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DA   78 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TT
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hC
Confidence            46899999999999999999999999999999999999864 3334445557889999999999999887764     57


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|+||||||+.  ...++.+.+.++|++.+++|+.++|.++|++.|+|.+++ .|+||++||..+..+.+...+|++||
T Consensus        79 ~iDiLVNNAGi~--~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           79 GFDILVNNAGII--RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             CCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            999999999987  567799999999999999999999999999999997664 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +++.+|+|++|.|++++|||||+|+||+|+|||......       .+...+......|+ +|+++|||||++++||+++
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~-------~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA-------DAARNKAILERIPA-GRWGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-------SHHHHHHHHTTCTT-SSCBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc-------CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999876542       12223333445555 9999999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      .++|+|||+|.||||++.
T Consensus       229 ~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          229 AADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCcCCeEEECccccc
Confidence            999999999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.6e-53  Score=360.01  Aligned_cols=233  Identities=29%  Similarity=0.429  Sum_probs=202.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++.   .+.++..+++|++|+++++++++    ++|++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFE----ALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHH----HCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHH----hcCCCCE
Confidence            6999999999999999999999999999999999998766532   24678999999999999887775    5799999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||||||+.  .  ++.+++.++|++.+++|+.+++.++|++.|.|+++ .|+||++||..+..+.+...+|++||+++.+
T Consensus        82 LVNNAGi~--~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~  156 (242)
T 4b79_A           82 LVNNAGIS--R--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQ  156 (242)
T ss_dssp             EEECCCCC--C--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEECCCCC--C--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHH
Confidence            99999975  2  46788999999999999999999999999999754 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      |+|+++.|++++|||||+|+||+|+|||.....       ..++..+......|+ +|+++|+|+|++++||+++.++|+
T Consensus       157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~-------~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~a~~i  228 (242)
T 4b79_A          157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK-------ADVEATRRIMQRTPL-ARWGEAPEVASAAAFLCGPGASFV  228 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCC-----C-------CCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc-------CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999999999999999876542       122223334445556 999999999999999999999999


Q ss_pred             cccEEEecCCccc
Q 022418          272 SGHNLVVDGGFTS  284 (297)
Q Consensus       272 tG~~i~vdgG~~~  284 (297)
                      |||+|.+|||+..
T Consensus       229 TG~~l~VDGG~la  241 (242)
T 4b79_A          229 TGAVLAVDGGYLC  241 (242)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCceEEECccHhh
Confidence            9999999999863

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.9e-52  Score=362.79  Aligned_cols=247  Identities=24%  Similarity=0.312  Sum_probs=214.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.++       ...+..++++|++++++++++++++.+++|+
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-------GLPEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            368999999999999999999999999999999999998652       1234557899999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~  187 (297)
                      +|+||||||.......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+ ....|++||+
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKa  158 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKA  158 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHH
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHH
Confidence            999999999875445678899999999999999999999999999999988899999999999998876 4678999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHH---HHhcCCCCCCCCCHHHHHHHHHH
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLEL---VYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      |++.|+++++.|++++|||||+|+||+|+|++.........  .....+...+.   .....|. +|+++|||+|++++|
T Consensus       159 al~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peevA~~v~f  237 (261)
T 4h15_A          159 ALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-GRPAKPEEVANLIAF  237 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999876544322  12222222222   2334455 999999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcc
Q 022418          263 LASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      |+++.++|+|||+|.+|||+.
T Consensus       238 LaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          238 LASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTCS
T ss_pred             HhCchhcCccCcEEEECCcCc
Confidence            999999999999999999974

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=7.2e-52  Score=359.29  Aligned_cols=248  Identities=23%  Similarity=0.265  Sum_probs=218.5

Q ss_pred             ccCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      +++++||+++||||++  |||+++|++|+++|++|++++|+++.+++..+.+    +.++.++++|++|+++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4789999999999875  9999999999999999999999988877766554    357899999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          103 ISKHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .+++|++|++|||||+...  ....+.+.++++|+..+++|+.+++.+++.+.+.++  +.|+||++||..+..+.+.+.
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccch
Confidence            9999999999999998632  123567788999999999999999999999998774  469999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||+++++|+|+++.|++++|||||+|+||+++|++.+...       ..+...+......|+ +|+++|||+|+++
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-------~~~~~~~~~~~~~Pl-~R~g~peevA~~v  230 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-------GFNTILKEIKERAPL-KRNVDQVEVGKTA  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-------THHHHHHHHHHHSTT-SSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-------CCHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999876432       223333444455566 9999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +||+++.++|+|||+|.+|||++.++
T Consensus       231 ~fL~Sd~a~~iTG~~i~VDGG~~avr  256 (256)
T 4fs3_A          231 AYLLSDLSSGVTGENIHVDSGFHAIK  256 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHhCchhcCccCCEEEECcCHHhcC
Confidence            99999999999999999999998653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=5.4e-52  Score=356.06  Aligned_cols=231  Identities=25%  Similarity=0.424  Sum_probs=208.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|++|||||++|||+++|++|+++|++|++++|+++.+++..++ ..++.++++|++|+++++++++++.+++|++|+||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            49999999999999999999999999999999999888777665 45788999999999999999999999999999999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      ||||..  ...++.+.+.++|++.+++|+.+++.+++++.|+|+++ +|++|++||..+..+.+...+|++||+++.+|+
T Consensus        81 NNAG~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~lt  157 (247)
T 3ged_A           81 NNACRG--SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVALT  157 (247)
T ss_dssp             ECCCCC--CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHHH
Confidence            999987  66789999999999999999999999999999999865 499999999999999999999999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      |++|.|+++ |||||+|+||+++|++..+..+.             .....|+ +|+++|+|+|++++||+++  +|+||
T Consensus       158 k~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~-------------~~~~~Pl-~R~g~pediA~~v~fL~s~--~~iTG  220 (247)
T 3ged_A          158 HALAMSLGP-DVLVNCIAPGWINVTEQQEFTQE-------------DCAAIPA-GKVGTPKDISNMVLFLCQQ--DFITG  220 (247)
T ss_dssp             HHHHHHHTT-TSEEEEEEECSBCCCC---CCHH-------------HHHTSTT-SSCBCHHHHHHHHHHHHHC--SSCCS
T ss_pred             HHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHH-------------HHhcCCC-CCCcCHHHHHHHHHHHHhC--CCCCC
Confidence            999999997 99999999999999986543221             1223444 9999999999999999984  69999


Q ss_pred             cEEEecCCcccc
Q 022418          274 HNLVVDGGFTSF  285 (297)
Q Consensus       274 ~~i~vdgG~~~~  285 (297)
                      |+|.+|||++.+
T Consensus       221 ~~i~VDGG~s~r  232 (247)
T 3ged_A          221 ETIIVDGGMSKR  232 (247)
T ss_dssp             CEEEESTTGGGC
T ss_pred             CeEEECcCHHHh
Confidence            999999999865

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.7e-49  Score=342.86  Aligned_cols=244  Identities=31%  Similarity=0.449  Sum_probs=220.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +++++||+++||||++|||++++++|+++|++|++++|+.+.+++..++++.+...+.+|++|+++++++++++.+++|+
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999999999999988888887777889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+++..|++||++
T Consensus        84 iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (248)
T 3op4_A           84 VDILVNNAGIT--RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAG  161 (248)
T ss_dssp             CSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            99999999987  4566888999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|++.++.|++++||+||+|+||+++|++.+...        .+ .........+. +++.+|+|+|++++||+++.+
T Consensus       162 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~-~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~~~  231 (248)
T 3op4_A          162 VIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN--------DE-QRTATLAQVPA-GRLGDPREIASAVAFLASPEA  231 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC--------HH-HHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC--------HH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999999999875421        11 12222233334 889999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .++||++|.+|||+++
T Consensus       232 ~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          232 AYITGETLHVNGGMYM  247 (248)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             CCccCcEEEECCCeec
Confidence            9999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.3e-49  Score=342.06  Aligned_cols=254  Identities=23%  Similarity=0.292  Sum_probs=221.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999998887776654     2358899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+.+..|+
T Consensus        83 ~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T 3lf2_A           83 RTLGCASILVNNAGQG--RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS  160 (265)
T ss_dssp             HHHCSCSEEEECCCCC--CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence            9999999999999987  56678899999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHhc--CCCCCCCCCHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYST--GVLEGTHCEPNDIANAA  260 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~dia~~~  260 (297)
                      +||++++.|++.++.|++++||+||+|+||+++|++.......... ....+.........  .+. +++++|+|+|+++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v  239 (265)
T 3lf2_A          161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKPIEAARAI  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999987765431110 11122222222221  344 8999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +||+++.+.|+||++|.+|||++..
T Consensus       240 ~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          240 LFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHHhCchhcCcCCCEEEECCCCcCC
Confidence            9999999999999999999998763

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.1e-48  Score=339.35  Aligned_cols=246  Identities=30%  Similarity=0.460  Sum_probs=219.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998887776654   67899999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||..  ...++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        86 ~~g~id~lv~nAg~~--~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (256)
T 3gaf_A           86 QFGKITVLVNNAGGG--GPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS  162 (256)
T ss_dssp             HHSCCCEEEECCCCC--CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC--CCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence            999999999999987  44456 889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|+++++.|++++||+||+|+||+++|++.....        .+..........+. +++++|+|+|++++||+
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~~p~-~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--------TPEIERAMLKHTPL-GRLGEAQDIANAALFLC  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--------CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--------CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999876432        12222223333444 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.+.++||++|++|||.+..
T Consensus       234 s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSCCC
T ss_pred             CCcccCccCCEEEECCCcccc
Confidence            999999999999999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.6e-48  Score=340.66  Aligned_cols=255  Identities=33%  Similarity=0.500  Sum_probs=225.6

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35578999999999999999999999999999999999999999988888888889999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       100 g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A          100 GRVDVLVNNAGFG--TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             SCCCEEEECCCCC--CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence            9999999999987  55668889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|++++||+||+|+||+|+|++.......   ...............+. +++++|+|+|++++||+++
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~  253 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE---AKDPAKLRSDFNARAVM-DRMGTAEEIAEAMLFLASD  253 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT---CSCHHHHHHHHHTTSTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc---ccchhHHHHHHHhcCcc-cCCcCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999985543321   11122222223333344 8899999999999999999


Q ss_pred             CCCcccccEEEecCCcccccC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      .+.++||++|.+|||++....
T Consensus       254 ~~~~itG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          254 RSRFATGSILTVDGGSSIGNH  274 (277)
T ss_dssp             GGTTCCSCEEEESSSSSSCCT
T ss_pred             ccCCCcCCEEEECCchhhhhc
Confidence            999999999999999987654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.6e-48  Score=338.72  Aligned_cols=253  Identities=31%  Similarity=0.456  Sum_probs=222.7

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999999999999888888888999999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .|++|++||..+..+.+....|++||+
T Consensus        83 id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (259)
T 4e6p_A           83 LDILVNNAALF--DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKA  160 (259)
T ss_dssp             CCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHH
Confidence            99999999987  556688899999999999999999999999999997655 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH--HhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.|++.++.|++++||+||+|+||+++|++......  ........+..........+. +++++|+|+|++++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L~s  239 (259)
T 4e6p_A          161 AVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGMAIFLAS  239 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCTHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999998765421  111111122222333333444 899999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.+.++||++|++|||+++
T Consensus       240 ~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          240 AESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCCCCCEEEECcChhc
Confidence            9999999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-48  Score=339.43  Aligned_cols=246  Identities=25%  Similarity=0.393  Sum_probs=220.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   + .++.++.+|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888777665   2 578999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y  182 (297)
                      ++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+. .+.+++..|
T Consensus        84 ~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVF--PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHSCCSEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            9999999999999987  5567889999999999999999999999999999988778999999999986 788888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|++++||+||+|+||+++|++....         .+..........+. +++.+|+|+|++++|
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~p~-~r~~~p~dva~~v~~  231 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARSIPA-GALGTPEDIGHLAAF  231 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTTSTT-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999976532         11222223333444 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      |+++.+.++||++|.+|||+++.
T Consensus       232 L~s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          232 LATKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTCC
T ss_pred             HhCccccCCcCCEEEECCCeecC
Confidence            99999999999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=8.1e-49  Score=341.99  Aligned_cols=246  Identities=27%  Similarity=0.439  Sum_probs=211.4

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999999999999999999998888888889999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       100 g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A          100 EGIDILVNNAGIT--RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             TSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred             CCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence            9999999999987  45667888999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|++++||+||+|+||+++|++.....         +..........+. +++++|+|+|++++||+++
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~p~-~r~~~~edvA~~v~~L~s~  247 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---------EKQKEAIMAMIPM-KRMGIGEEIAFATVYLASD  247 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---------HHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---------HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999865421         1222223333444 8999999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      .+.++||++|.+|||+++
T Consensus       248 ~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          248 EAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GGTTCCSCEEEESTTC--
T ss_pred             cccCccCCEEEECCCeee
Confidence            999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.7e-48  Score=340.03  Aligned_cols=248  Identities=27%  Similarity=0.419  Sum_probs=220.2

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ..+++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++++|++|+++++++++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999998877766553    678999999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCcc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~  181 (297)
                      .++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .|+||++||..+..+.+....
T Consensus        93 ~~~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGIS--HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHTSCSEEEEECCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHcCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            99999999999999987  556788899999999999999999999999999997655 689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|++++||+||+|+||+|+|++......       .+..........+. +++.+|+|+|++++
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~p~dva~~v~  242 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-------DEAKSAPMIARIPL-GRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-------SHHHHHHHHTTCTT-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-------ChHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999998764421       11222222333444 88999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ||+++.+.++||++|.+|||+++
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            99999999999999999999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5.6e-48  Score=335.24  Aligned_cols=248  Identities=25%  Similarity=0.352  Sum_probs=219.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999987 88888777766655   567899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+++..|++||++
T Consensus        83 id~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASG--VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            99999999976  5567888999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|++.++.|++++||+||+|+||+++|++......       .+..........+. +++++|+|+|++++||+++.+
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L~s~~~  232 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-------REDLLEDARQNTPA-GRMVEIKDMVDTVEFLVSSKA  232 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-------HHHHHHHHHHHCTT-SSCBCHHHHHHHHHHHTSSTT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999998764321       12222333333444 899999999999999999999


Q ss_pred             CcccccEEEecCCcccccCCCC
Q 022418          269 KYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      .++||++|.+|||++......-
T Consensus       233 ~~itG~~i~vdGG~~~~~~~~~  254 (258)
T 3oid_A          233 DMIRGQTIIVDGGRSLLVLEHH  254 (258)
T ss_dssp             TTCCSCEEEESTTGGGBCC---
T ss_pred             CCccCCEEEECCCccCCCCCCC
Confidence            9999999999999998765543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9.1e-49  Score=338.07  Aligned_cols=244  Identities=29%  Similarity=0.452  Sum_probs=219.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999999999999999999998888888889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|++|++||..+..+.+.+..|++||++
T Consensus        82 d~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  159 (247)
T 3rwb_A           82 DILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGG  159 (247)
T ss_dssp             SEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHH
Confidence            9999999987  566688999999999999999999999999999998765 6999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|++.++.|++++||+||+|+||+|+|++.......        ..........+. +++.+|+|+|+++.||+++.+
T Consensus       160 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~-~r~~~pedva~~v~~L~s~~~  230 (247)
T 3rwb_A          160 VIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN--------EAFGFVEMLQAM-KGKGQPEHIADVVSFLASDDA  230 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG--------GGHHHHHHHSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh--------HHHHHHhccccc-CCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999976543211        111112222334 888999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .++||++|.+|||++.
T Consensus       231 ~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          231 RWITGQTLNVDAGMVR  246 (247)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.4e-48  Score=341.28  Aligned_cols=248  Identities=28%  Similarity=0.422  Sum_probs=222.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999998888777665   56789999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       100 ~~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQ--FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV  177 (271)
T ss_dssp             HTCCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HCCCCCEEEECCCCC--CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH
Confidence            999999999999987  556788899999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|++.++.|++++||+||+|+||+++|++......       .+..........+. +++++|+|+|++++||+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~  249 (271)
T 4ibo_A          178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALID-------NPEFDAWVKARTPA-KRWGKPQELVGTAVFLS  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHH-------CHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhccc-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998765432       11222233334444 89999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.+.++||++|.+|||++..
T Consensus       250 s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          250 ASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CccccCCCCcEEEECCCeecc
Confidence            999999999999999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-48  Score=335.66  Aligned_cols=252  Identities=23%  Similarity=0.313  Sum_probs=222.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3589999999999999999999999999999999999998888776655   5689999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.+.+..|++||
T Consensus        87 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  164 (264)
T 3ucx_A           87 GRVDVVINNAFRVP-SMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAK  164 (264)
T ss_dssp             SCCSEEEECCCSCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHH
Confidence            99999999999853 455688899999999999999999999999999997654 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.|++.++.|++++||+||+|+||+|+|++.........  .....+..........+. +++.+|+|+|++++||+
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~  243 (264)
T 3ucx_A          165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDEVASAILFMA  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSS-SSCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCc-ccCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999876654321  112233333444444444 89999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.++||++|.+|||.++
T Consensus       244 s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          244 SDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-48  Score=338.27  Aligned_cols=256  Identities=26%  Similarity=0.374  Sum_probs=216.3

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHH---hCCCeeEEEecCCCH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ------------HQLGQQTAKE---LGPNATFIACDVTKE   92 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~------------~~~~~~~~~~---~~~~v~~~~~D~s~~   92 (297)
                      .+++++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+.   .+.++.++.+|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            3567999999999999999999999999999999999997            3344443333   367899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      ++++++++++.+++|++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCC--CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            999999999999999999999999987  556688999999999999999999999999999998878899999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hh---cCCCHHHHHHHHHhcCCCC
Q 022418          173 LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IY---AGVDASRLLELVYSTGVLE  247 (297)
Q Consensus       173 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~  247 (297)
                      ..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++.......  ..   ...................
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY  241 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence            999999999999999999999999999999999999999999999987643211  00   0111112222222222223


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       248 ~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++++|+|+|++++||+++...++||++|++|||++..
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            88999999999999999999999999999999998864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-48  Score=336.54  Aligned_cols=245  Identities=30%  Similarity=0.445  Sum_probs=218.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..++++||+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            34579999999999999999999999999999999999999999988888888899999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||........+.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  164 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKA  164 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHH
Confidence            99999999998743345677899999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|+++++.|++++||+||+|+||+++|++.....        .+..........+. +++++|+|+|++++||+++.
T Consensus       165 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~  235 (271)
T 3tzq_B          165 AIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--------PQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDR  235 (271)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999875322        11222223333334 88999999999999999999


Q ss_pred             CCcccccEEEecCC
Q 022418          268 AKYVSGHNLVVDGG  281 (297)
Q Consensus       268 ~~~~tG~~i~vdgG  281 (297)
                      +.++||++|.+|||
T Consensus       236 ~~~itG~~i~vdGG  249 (271)
T 3tzq_B          236 AAFITGQVIAADSG  249 (271)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             cCCcCCCEEEECCC
Confidence            99999999999999

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.8e-48  Score=338.76  Aligned_cols=255  Identities=28%  Similarity=0.416  Sum_probs=215.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC----------------chhHHHHHHHh---CCCeeEEEecC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ----------------HQLGQQTAKEL---GPNATFIACDV   89 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~----------------~~~~~~~~~~~---~~~v~~~~~D~   89 (297)
                      +.+++||+++||||++|||++++++|+++|++|++++|+                .+.+++..+++   +.++.++.+|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            457899999999999999999999999999999999987                45555554443   56789999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEe
Q 022418           90 TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTA  168 (297)
Q Consensus        90 s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vs  168 (297)
                      +|+++++++++++.+++|++|+||||||... ....+.+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++|
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGN-GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            9999999999999999999999999999873 222477889999999999999999999999999997654 68999999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hh---cCCCHHHHHHHH-Hh
Q 022418          169 SVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IY---AGVDASRLLELV-YS  242 (297)
Q Consensus       169 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~---~~~~~~~~~~~~-~~  242 (297)
                      |..+..+.+....|++||++++.|+++++.|++++||+||+|+||+|+|++.......  ..   ............ ..
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T 3uve_A          165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF  244 (286)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred             chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence            9999999999999999999999999999999999999999999999999988643211  11   111122222221 22


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          243 TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       243 ~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ...+ +++++|+|+|++++||+++.+.|+||++|.+|||+++.
T Consensus       245 ~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          245 HTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             CSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            2234 88999999999999999999999999999999998763

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.4e-48  Score=338.79  Aligned_cols=246  Identities=27%  Similarity=0.431  Sum_probs=218.3

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3445689999999999999999999999999999999999998877766554   5678999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|+
T Consensus       101 ~~~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (270)
T 3ftp_A          101 KEFGALNVLVNNAGIT--QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYA  178 (270)
T ss_dssp             HHHSCCCEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHH
Confidence            9999999999999987  45667889999999999999999999999999999887889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+||+|+||+|+|++.....        . ..........+. +++.+|+|+|++++||
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--------~-~~~~~~~~~~p~-~r~~~pedvA~~v~~L  248 (270)
T 3ftp_A          179 AAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP--------Q-EQQTALKTQIPL-GRLGSPEDIAHAVAFL  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC--------H-HHHHHHHTTCTT-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC--------H-HHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999875421        1 122222333344 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...++||++|++|||+.+
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          249 ASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             hCCCcCCccCcEEEECCCccc
Confidence            999999999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.6e-48  Score=338.51  Aligned_cols=252  Identities=27%  Similarity=0.374  Sum_probs=219.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      -+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999999998888777665   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHH--hccCCCCceEEEEecccccccCCCCccchhh
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR--VMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|  .|++++.|+||++||..+..+.+....|++|
T Consensus       101 ~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A          101 PIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             SCCEEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCcEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence            999999999987  556788899999999999999999999999999  5766677999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.|++.++.|++++||+||+|+||+|+|++..........  ....+..........+. +++.+|+|+|++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  257 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLVGYL  257 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999988765432111  11233333334444444 8999999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.++||++|.+|||++.+
T Consensus       258 ~s~~a~~itG~~i~vdGG~~~y  279 (279)
T 3sju_A          258 VTDAAASITAQALNVCGGLGNY  279 (279)
T ss_dssp             TSSGGGGCCSCEEEESTTCCCC
T ss_pred             hCccccCcCCcEEEECCCccCC
Confidence            9999999999999999999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.9e-48  Score=338.91  Aligned_cols=251  Identities=32%  Similarity=0.483  Sum_probs=218.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999999999998888888889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++
T Consensus       105 D~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  182 (277)
T 3gvc_A          105 DKLVANAGVV--HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGI  182 (277)
T ss_dssp             CEEEECCCCC--CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHH
Confidence            9999999987  55668889999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+|+|++.....................  ..+. +++++|+|+|++++||+++.+.
T Consensus       183 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~r~~~pedvA~~v~~L~s~~a~  259 (277)
T 3gvc_A          183 IQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI--ARLQ-GRMAAPEEMAGIVVFLLSDDAS  259 (277)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH--HHHH-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh--hccc-cCCCCHHHHHHHHHHHcCCccC
Confidence            999999999999999999999999999998765432100000000000000  1112 7889999999999999999999


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      ++||++|.+|||++..
T Consensus       260 ~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          260 MITGTTQIADGGTIAA  275 (277)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CccCcEEEECCcchhc
Confidence            9999999999998753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=6e-48  Score=338.88  Aligned_cols=250  Identities=33%  Similarity=0.470  Sum_probs=220.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999888887776   4678899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~s  185 (297)
                      +++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|++|++||..+. .+.++...|++|
T Consensus        84 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  162 (280)
T 3tox_A           84 GGLDTAFNNAGALG-AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS  162 (280)
T ss_dssp             SCCCEEEECCCCCC-SCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence            99999999999763 3456888999999999999999999999999999988888999999999988 678888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+|+|++.......     ..+..........+. +++++|+|+|++++||++
T Consensus       163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s  236 (280)
T 3tox_A          163 KAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG-----AAPETRGFVEGLHAL-KRIARPEEIAEAALYLAS  236 (280)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT-----CCTHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc-----cCHHHHHHHhccCcc-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999987542211     112222333333444 889999999999999999


Q ss_pred             CCCCcccccEEEecCCccccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +.+.++||++|.+|||++...
T Consensus       237 ~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          237 DGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             GGGTTCCSCEEEESTTGGGCC
T ss_pred             ccccCCcCcEEEECCCccccc
Confidence            999999999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.2e-48  Score=334.85  Aligned_cols=248  Identities=24%  Similarity=0.366  Sum_probs=218.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999999999999988888887889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+++..|++||+++
T Consensus        84 d~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~  159 (255)
T 4eso_A           84 DLLHINAGVS--ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAAL  159 (255)
T ss_dssp             EEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            9999999987  5567888999999999999999999999999999865  58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+++|++.......   ...............+. +++.+|+|+|++++||+++ +.
T Consensus       160 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~-~~  234 (255)
T 4eso_A          160 VSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGIT---EAERAEFKTLGDNITPM-KRNGTADEVARAVLFLAFE-AT  234 (255)
T ss_dssp             HHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSC---HHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHHT-CT
T ss_pred             HHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCC---hhhHHHHHHHHhccCCC-CCCcCHHHHHHHHHHHcCc-Cc
Confidence            9999999999999999999999999999986431100   00011122222333444 8999999999999999998 89


Q ss_pred             cccccEEEecCCccccc
Q 022418          270 YVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~  286 (297)
                      ++||++|.+|||++..-
T Consensus       235 ~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          235 FTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             TCCSCEEEESTTTTTTB
T ss_pred             CccCCEEEECCCccccC
Confidence            99999999999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.1e-47  Score=335.59  Aligned_cols=249  Identities=29%  Similarity=0.367  Sum_probs=219.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CC---CeeEEEecCCCHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP---NATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~---~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.   ++.++.+|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            456799999999999999999999999999999999999998888777665   22   688999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+....
T Consensus        85 ~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSE-NIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHcCCCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            9999999999999999743 455688899999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|++++||+||+|+||+++|++......       ............+. +++++|+|+|++++
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~~~dva~~~~  235 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE-------SAELSSDYAMCTPL-PRQGEVEDVANMAM  235 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-------CHHHHHHHHHHCSS-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc-------CHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999998765421       11222222333444 88999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ||+++.+.++||++|.+|||.++.
T Consensus       236 ~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          236 FLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHhCcccCCCCCCEEEeCCChhcc
Confidence            999999999999999999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.1e-47  Score=337.42  Aligned_cols=257  Identities=28%  Similarity=0.434  Sum_probs=215.6

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHh---CCCeeEEEecCCC
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ------------HQLGQQTAKEL---GPNATFIACDVTK   91 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~------------~~~~~~~~~~~---~~~v~~~~~D~s~   91 (297)
                      ....+++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+++   +.++.++.+|++|
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            34457999999999999999999999999999999999987            44555544433   6789999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecc
Q 022418           92 ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASV  170 (297)
Q Consensus        92 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~  170 (297)
                      +++++++++++.+++|++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALAS-EGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            99999999999999999999999999873 223478899999999999999999999999999986654 7999999999


Q ss_pred             cccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH-hh-c---CCCHHHHHHHH-HhcC
Q 022418          171 TGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ-IY-A---GVDASRLLELV-YSTG  244 (297)
Q Consensus       171 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~-~---~~~~~~~~~~~-~~~~  244 (297)
                      .+..+.+....|++||++++.|+++++.|++++||+||+|+||+|+|++....... .. .   ........... ....
T Consensus       180 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (299)
T 3t7c_A          180 GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV  259 (299)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc
Confidence            99999999999999999999999999999999999999999999999987643221 11 1   11112221111 2222


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+ +++++|+|+|++++||+++.+.|+||++|.+|||+++.
T Consensus       260 ~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          260 LP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            33 78899999999999999999999999999999998763

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-47  Score=338.14  Aligned_cols=247  Identities=28%  Similarity=0.406  Sum_probs=221.2

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC----CCeeEEEecCCCHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG----PNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ..++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.    .++.++.+|++|+++++++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999999888877762    57889999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCcc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHT  181 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~  181 (297)
                      .++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.+++..
T Consensus       114 ~~~~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~  191 (293)
T 3rih_A          114 VDAFGALDVVCANAGIF--PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSH  191 (293)
T ss_dssp             HHHHSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHH
T ss_pred             HHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHH
Confidence            99999999999999987  5566889999999999999999999999999999988788999999999986 78888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|++++||+||+|+||+|+|++.....         +..........+. +++++|+|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~p~-~r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG---------EEYISGMARSIPM-GMLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC---------HHHHHHHHTTSTT-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc---------HHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999765432         1122223333444 88999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ||+++.+.++||++|.+|||+++.
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             HHhCccccCCCCCEEEECCCccCC
Confidence            999999999999999999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=7.8e-48  Score=337.70  Aligned_cols=251  Identities=27%  Similarity=0.318  Sum_probs=220.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999988777666554    67899999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+....|++
T Consensus       102 ~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGN--FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            999999999999977  556688899999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|++.++.|++++||+||+|+||+|+|++.......     . ...........+. +++++|+|+|++++||+
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~-~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~  252 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-----P-QASLSTKVTASPL-QRLGNKTEIAHSVLYLA  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC-----C-HHHHHHHHHTSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC-----C-HHHHHHHhccCCC-CCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865432210     1 1222223333444 89999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccCC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++.+.++||++|.+|||+++..++
T Consensus       253 s~~~~~itG~~i~vdGG~~~~~~e  276 (277)
T 4fc7_A          253 SPLASYVTGAVLVADGGAWLTFPN  276 (277)
T ss_dssp             SGGGTTCCSCEEEESTTHHHHCCC
T ss_pred             CCccCCcCCCEEEECCCcccCCCC
Confidence            999999999999999999886543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-47  Score=336.69  Aligned_cols=254  Identities=28%  Similarity=0.446  Sum_probs=209.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .++++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++    +.++.++.+|++|+++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999 555666655554    467889999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .+++|++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|
T Consensus        99 ~~~~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  176 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQ--FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY  176 (281)
T ss_dssp             HHHTSSCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHCCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence            99999999999999987  5566888999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHH-HHHHHhcCCCCCCCCCHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRL-LELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ++||++++.|++.++.|++++||+||+|+||+|+|++..........  ....+.. .+...... +.+++++|+|+|++
T Consensus       177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~~edvA~~  255 (281)
T 3v2h_A          177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQ-PTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CC-TTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcC-CCCCccCHHHHHHH
Confidence            99999999999999999999999999999999999987654332110  0111111 11122233 34899999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++||+++.+.++||++|.+|||++.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=7.9e-47  Score=330.08  Aligned_cols=251  Identities=27%  Similarity=0.384  Sum_probs=215.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+.+++||++|||||++|||++++++|+++|++|++++++. +.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34579999999999999999999999999999999987654 4455544443   6789999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc-ccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT-GLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~-~~~~~~~~~~Y  182 (297)
                      ++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|++|++||.. +..+.++...|
T Consensus        92 ~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVV--SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHHSCCCEEECCCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence            9999999999999987  5667889999999999999999999999999999965  68999999988 56777888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc---CCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ++||++++.|++.++.|++++||+||+|+||+++|++..........   ....+..........+. +++.+|+|+|++
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~  246 (270)
T 3is3_A          168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQDVANV  246 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT-CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            99999999999999999999999999999999999998754322111   12233444444444455 899999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCcc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++||+++.+.|+||++|.+|||++
T Consensus       247 v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          247 VGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999999974

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1e-47  Score=336.89  Aligned_cols=253  Identities=31%  Similarity=0.427  Sum_probs=213.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHHHh---CCCeeEEEecCCCH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-------------QHQLGQQTAKEL---GPNATFIACDVTKE   92 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~~---~~~v~~~~~D~s~~   92 (297)
                      +.+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+.+   +.++.++.+|++|+
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF   85 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            45799999999999999999999999999999999998             455555554443   57889999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVT  171 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~  171 (297)
                      ++++++++++.++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVA--APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            999999999999999999999999987  456688999999999999999999999999999997755 68999999999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHhcCCCCCC
Q 022418          172 GLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYSTGVLEGT  249 (297)
Q Consensus       172 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  249 (297)
                      +..+.+....|++||++++.|++.++.|++++||+||+|+||+|+|++...........  ...+.... ......+ .+
T Consensus       164 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p-~r  241 (277)
T 3tsc_A          164 GMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH-VLTPFLP-DW  241 (277)
T ss_dssp             GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTT-TTCCSSS-CS
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHH-HhhhccC-CC
Confidence            99999999999999999999999999999999999999999999999876432110000  00000000 0111223 46


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.+|+|+|++++||+++.+.++||++|.+|||++.+
T Consensus       242 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          242 VAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            899999999999999999999999999999998763

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-47  Score=331.24  Aligned_cols=245  Identities=26%  Similarity=0.391  Sum_probs=199.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|+
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36789999999999999999999999999999999999999888887777778999999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCcc----CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEecccccccCCC
Q 022418          109 LDIMYNNAGVACKTPRSI----VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLA  178 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vss~~~~~~~~~  178 (297)
                      +|+||||||...  ...+    .+.+.++|++.+++|+.+++.+++++.|.|+++      +.|+||++||..+..+.++
T Consensus        82 id~lv~nAg~~~--~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tpc_A           82 VHGLVNCAGTAP--GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG  159 (257)
T ss_dssp             CCEEEECCCCCC--CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             CCEEEECCCCCC--CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC
Confidence            999999999873  2222    267899999999999999999999999999874      5789999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      ...|++||++++.|++.++.|++++||+||+|+||+|+|++......         ..........+..+++++|+|+|+
T Consensus       160 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~~~~p~~~r~~~~~dva~  230 (257)
T 3tpc_A          160 QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALAASVPFPPRLGRAEEYAA  230 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------------CCSSSSCSCBCHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHHhcCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999998754321         111222223333378999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++.||+++  .++||++|.+|||+++..
T Consensus       231 ~v~~l~s~--~~itG~~i~vdGG~~~~~  256 (257)
T 3tpc_A          231 LVKHICEN--TMLNGEVIRLDGALRMAP  256 (257)
T ss_dssp             HHHHHHHC--TTCCSCEEEESTTCCC--
T ss_pred             HHHHHccc--CCcCCcEEEECCCccCCC
Confidence            99999976  789999999999998753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-47  Score=337.11  Aligned_cols=254  Identities=28%  Similarity=0.438  Sum_probs=213.0

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHHHh---CCCeeEEEecCC
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-------------QHQLGQQTAKEL---GPNATFIACDVT   90 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~~---~~~v~~~~~D~s   90 (297)
                      ..+.+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+.+   +.++.++.+|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3456799999999999999999999999999999999998             555666555444   567899999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEec
Q 022418           91 KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTAS  169 (297)
Q Consensus        91 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss  169 (297)
                      |+++++++++++.++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVL--SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            99999999999999999999999999987  456688899999999999999999999999999997764 799999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH-hhcCCCHHHHHHHHHhcCCCCC
Q 022418          170 VTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ-IYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       170 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                      ..+..+.+....|++||++++.|++.++.|++++||+||+|+||+++|++....... .... ..............+ .
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~  243 (280)
T 3pgx_A          166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFAR-HPSFVHSFPPMPVQP-N  243 (280)
T ss_dssp             GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHH-CGGGGGGSCCBTTBC-S
T ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhc-CchhhhhhhhcccCC-C
Confidence            999999999999999999999999999999999999999999999999987642111 0000 000000000011122 3


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++++|+|+|++++||+++.+.++||++|.+|||++.
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            688999999999999999999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=2e-47  Score=331.58  Aligned_cols=247  Identities=26%  Similarity=0.385  Sum_probs=215.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999999888887776   4578999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      |++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|. +.+.|++|++||..+..+.+.+..|++|
T Consensus        82 g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 GRIDILINNAAGN--FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             SCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            9999999999987  556788999999999999999999999999999994 4457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc-cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELC-EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.|++.++.|++ ++||+||+|+||+|+|++....... .....     .......+. +++.+|+|+|++++||+
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-~~~~~-----~~~~~~~p~-~r~~~pedvA~~v~~L~  232 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-SEEMA-----KRTIQSVPL-GRLGTPEEIAGLAYYLC  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCS-----HHHHTTSTT-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-CHHHH-----HHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            9999999999999997 7799999999999999976532211 00111     112223344 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.+.++||++|.+|||+++.
T Consensus       233 s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          233 SDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             SGGGTTCCSCEEEESTTTTSC
T ss_pred             CchhcCccCCEEEECCCcccC
Confidence            999999999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.8e-47  Score=332.83  Aligned_cols=240  Identities=31%  Similarity=0.521  Sum_probs=214.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++.+|++|+++++++++++.++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 455555554443   568899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+.+..|++|
T Consensus       104 ~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  181 (269)
T 4dmm_A          104 WGRLDVLVNNAGIT--RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAA  181 (269)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHH
Confidence            99999999999987  5566888999999999999999999999999999988788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+|+|++......            .......+. +++++|+|+|++++||++
T Consensus       182 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------------~~~~~~~p~-~r~~~~~dvA~~v~~l~s  248 (269)
T 4dmm_A          182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA------------EKLLEVIPL-GRYGEAAEVAGVVRFLAA  248 (269)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH------------HHHGGGCTT-SSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH------------HHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998765431            112223334 889999999999999999


Q ss_pred             C-CCCcccccEEEecCCccc
Q 022418          266 D-DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~-~~~~~tG~~i~vdgG~~~  284 (297)
                      + .+.++||++|.+|||+++
T Consensus       249 ~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          249 DPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             CGGGGGCCSCEEEESTTSCC
T ss_pred             CcccCCCcCCEEEECCCeec
Confidence            8 788999999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-48  Score=338.95  Aligned_cols=252  Identities=28%  Similarity=0.376  Sum_probs=214.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888887776   45789999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc--cCCCCccc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL--GGLAQHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~--~~~~~~~Y  182 (297)
                      ++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++...|
T Consensus       102 ~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          102 KFGHLDIVVANAGING-VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HHSCCCEEEECCCCCC-CBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             HhCCCCEEEECCCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            9999999999999863 33568889999999999999999999999999999887889999999999877  77888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHH---HHHHHhcCC-CCCCCCCHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRL---LELVYSTGV-LEGTHCEPNDIAN  258 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~dia~  258 (297)
                      ++||++++.|++.++.|++++||+||+|+||+++|++.......     .....   ........+ ..+++++|+|+|+
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~  255 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLR-----HEEETAIPVEWPKGQVPITDGQPGRSEDVAE  255 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBC-----CHHHHSCCCBCTTCSCGGGTTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccc-----cchhhhhhhhhhhhcCccccCCCCCHHHHHH
Confidence            99999999999999999999999999999999999987543110     00000   000001111 1178899999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++||+++.+.++||++|.+|||+++.
T Consensus       256 ~v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          256 LIRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHcCccccCCcCCEEEECcCcccc
Confidence            999999999999999999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=3.4e-47  Score=330.49  Aligned_cols=252  Identities=33%  Similarity=0.440  Sum_probs=209.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+|++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999999999999999998888888899999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC----CceEEEEecccccccCCCCccch
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR----SGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|.+++    .+++|++||..+..+.+.+..|+
T Consensus        83 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  161 (261)
T 3n74_A           83 KVDILVNNAGIGH-KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN  161 (261)
T ss_dssp             CCCEEEECCCCCC-CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             CCCEEEECCccCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHH
Confidence            9999999999863 345677889999999999999999999999999997643    67899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+|++|+||+++|++........     .+..........+. +++++|+|+|++++||
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  235 (261)
T 3n74_A          162 ATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED-----SEEIRKKFRDSIPM-GRLLKPDDLAEAAAFL  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC-----cHHHHHHHhhcCCc-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876554221     11122222233334 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCccccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +++...++||++|++|||+++..
T Consensus       236 ~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          236 CSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             TSGGGTTCCSCEEEESTTTTC--
T ss_pred             cCCcccCcCCcEEEecCCcccCC
Confidence            99999999999999999998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=3.4e-47  Score=327.96  Aligned_cols=241  Identities=31%  Similarity=0.492  Sum_probs=212.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +.+|+++||||++|||++++++|+++|++|++++|+. +.+++..+++   +.++.++++|++|+++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999988754 5555554443   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGIT--RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            999999999987  456688899999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.|++++||+||+|+||+++|++.....         +...+......+. +++++|+|+|++++||+++.
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s~~  229 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---------DELKEQMLTQIPL-ARFGQDTDIANTVAFLASDK  229 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---------HHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---------HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999865321         1222223333444 88999999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.++||++|++|||+.+
T Consensus       230 ~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          230 AKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GTTCCSCEEEESTTSCC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            99999999999999863

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.1e-47  Score=332.72  Aligned_cols=245  Identities=22%  Similarity=0.353  Sum_probs=216.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999999999999999999998877776655   678999999999999999999999887


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                       +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++|
T Consensus       108 -g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          108 -APVDILVINASAQ--INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             -SCCCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHH
Confidence             8999999999987  4566888999999999999999999999999999988778999999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+++|++.......     ..+..........+. +++++|+|+|++++||++
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s  258 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ-----DPEGWDEYVRTLNWM-GRAGRPEEMVGAALFLAS  258 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH-----CHHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc-----ChHHHHHHHhhcCcc-CCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999987654321     122222222222244 889999999999999999


Q ss_pred             CCCCcccccEEEecCCc
Q 022418          266 DDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~  282 (297)
                      +.+.++||++|.+|||+
T Consensus       259 ~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          259 EACSFMTGETIFLTGGY  275 (275)
T ss_dssp             GGGTTCCSCEEEESSCC
T ss_pred             cccCCCCCCEEEeCCCC
Confidence            99999999999999995

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-47  Score=330.40  Aligned_cols=244  Identities=26%  Similarity=0.424  Sum_probs=211.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++||++|||||++|||++++++|+++|++|++++|+. ..++..+++   +.++.++.+|++|+++++++.+ ..++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHh
Confidence            4689999999999999999999999999999999999764 344444443   5678899999999999999954 4556


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus       104 ~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  181 (273)
T 3uf0_A          104 TRRVDVLVNNAGII--ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS  181 (273)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             cCCCcEEEECCCCC--CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHH
Confidence            78999999999987  5567888999999999999999999999999999988788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+|+|++......       .+..........+. +++++|+|+|++++||++
T Consensus       182 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          182 KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA-------DDERAAEITARIPA-GRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-------SHHHHHHHHHHSTT-SSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc-------CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998765431       11122222333444 899999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.+.++||++|.+|||++.
T Consensus       254 ~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEECcCccC
Confidence            9999999999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-47  Score=335.42  Aligned_cols=249  Identities=25%  Similarity=0.367  Sum_probs=197.7

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ..+.++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++++|++|+++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3445789999999999999999999999999999999996 666666655544   568999999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCCC
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLAQ  179 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~~  179 (297)
                      .++++++|+||||||.......++.+.+.++|++.+++|+.+++.++++++|.|.+++   .|+||++||..+..+.+..
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            9999999999999998432456788899999999999999999999999999997644   6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh-cCCCCCCCCCHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS-TGVLEGTHCEPNDIAN  258 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dia~  258 (297)
                      ..|++||++++.|++.++.|++++||+||+|+||+|+|++........         ...... ..+. +++++|+|+|+
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~~~p~-~r~~~pedvA~  251 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY---------DGLIESGLVPM-RRWGEPEDIGN  251 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------CCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH---------HHHHhhcCCCc-CCcCCHHHHHH
Confidence            999999999999999999999999999999999999999876542211         111111 2233 88999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++||+++.+.++||++|.+|||+++.
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          252 IVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             HHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             HHHHHhCccccCCCCCEEEECCCcccC
Confidence            999999999999999999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=6.2e-47  Score=331.77  Aligned_cols=243  Identities=35%  Similarity=0.502  Sum_probs=215.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888776665   567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccC--CCCccc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGG--LAQHTY  182 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~--~~~~~Y  182 (297)
                      ++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.  ++...|
T Consensus       107 ~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          107 LGGIDIAVCNAGIV--SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HSCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            99999999999987  556688899999999999999999999999999998765 4899999999987654  356789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|++++||+||+|+||+|+|++......          .........+. +++.+|+|+|++++|
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----------~~~~~~~~~p~-~r~~~pedvA~~v~f  253 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----------YHALWEPKIPL-GRMGRPEELTGLYLY  253 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----------GHHHHGGGSTT-SSCBCGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----------HHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998764311          11222333444 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++.+.++||++|.+|||++.
T Consensus       254 L~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          254 LASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HcCccccCccCcEEEECcCccC
Confidence            9999999999999999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-46  Score=335.89  Aligned_cols=256  Identities=29%  Similarity=0.451  Sum_probs=215.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHH---hCCCeeEEEecCCCH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ------------HQLGQQTAKE---LGPNATFIACDVTKE   92 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~------------~~~~~~~~~~---~~~~v~~~~~D~s~~   92 (297)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+            .+.+++..+.   .+.++.++.+|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            3457999999999999999999999999999999999886            4444444433   367899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVT  171 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~  171 (297)
                      ++++++++++.+++|++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGIS--NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            999999999999999999999999987  556688899999999999999999999999999997654 68999999999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH--HHhhc---CCCHHHHHHHHHhcCCC
Q 022418          172 GLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM--SQIYA---GVDASRLLELVYSTGVL  246 (297)
Q Consensus       172 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~  246 (297)
                      +..+.+.+..|++||++++.|+++++.|++++||+||+|+||+|+|++.....  .....   ....+............
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccC
Confidence            99999999999999999999999999999999999999999999999875321  11111   11222222222222222


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++++++|+|+|++++||+++.+.|+||++|.+|||++..
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            278899999999999999999999999999999998764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-46  Score=324.11  Aligned_cols=243  Identities=29%  Similarity=0.428  Sum_probs=218.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5688999999999999999999999999999999999998877766555   5689999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|++|||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.+++..|++||
T Consensus        81 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (247)
T 3lyl_A           81 LAIDILVNNAGIT--RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAK  158 (247)
T ss_dssp             CCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHH
Confidence            9999999999987  55667889999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|+.++||+|++|+||+++|++.....         +..........+. +++.+|+|+|+++++|+++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~dva~~i~~l~s~  228 (247)
T 3lyl_A          159 AGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---------DEQKSFIATKIPS-GQIGEPKDIAAAVAFLASE  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---------HHHHHHHHTTSTT-CCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---------HHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999876431         1122222333334 8899999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...++||++|++|||+++
T Consensus       229 ~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          229 EAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             CcCCccCCEEEECCCEec
Confidence            999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-46  Score=327.90  Aligned_cols=241  Identities=26%  Similarity=0.379  Sum_probs=201.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .|.+++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999884 4555555554443   66889999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|++|++||..+..+.+.+..|++
T Consensus       102 ~~g~iD~lvnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIM--PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             HHSCEEEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHH
Confidence            999999999999987  5667888999999999999999999999999999964  489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|+++++.|++++||+||+|+||+++|++......        +..........+. +++++|+|+|++++||+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS--------DEVRDRFAKLAPL-ERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHHHTSSTT-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC--------HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998754221        1112222333344 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCc
Q 022418          265 SDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~  282 (297)
                      ++.+.++||++|.+|||+
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             STTTTTCCSEEEEESSSC
T ss_pred             CccccCccCCEEEeCCCc
Confidence            999999999999999996

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-46  Score=327.20  Aligned_cols=251  Identities=24%  Similarity=0.367  Sum_probs=215.7

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +..+..+.+|++++++++++++   
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~---   81 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE---   81 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence            46799999999999999999999999999999999999998887776655     3467889999999999887765   


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                       +++++|++|||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|+
T Consensus        82 -~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           82 -KYPKVDILINNLGIF--EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             -HCCCCSEEEECCCCC--CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -hcCCCCEEEECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence             578999999999987  45668889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHH-HHHHHhc--CCCCCCCCCHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRL-LELVYST--GVLEGTHCEPNDIAN  258 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~-~~~~~~~--~~~~~~~~~~~dia~  258 (297)
                      +||++++.|++.++.|++++||+||+|+||+++|++...........  ...+.. .......  ..+.+++++|+|+|+
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            99999999999999999999999999999999999887665443221  111221 2222221  123489999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++||+++.+.++||++|.+|||++..
T Consensus       239 ~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          239 LVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999998764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3.2e-46  Score=326.09  Aligned_cols=255  Identities=29%  Similarity=0.433  Sum_probs=217.9

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ....+++||++|||||++|||++++++|+++|++|++++|+.+..       ...+..+.+|++|+++++++++++.+++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            345679999999999999999999999999999999999987643       2356788999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++||
T Consensus        80 g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           80 GRIDILVNNAGIE--QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             SCCCEEEECCCCC--CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHH
Confidence            9999999999987  55668889999999999999999999999999999887889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC--HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD--ASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.|++.++.|+++ ||+||+|+||+|+|++.............  .+..........+. +++++|+|+|++++||+
T Consensus       158 aa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          158 HALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999998 89999999999999988655432211111  12222223333444 89999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccCCCCCC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKNLKLPA  292 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~~~~~~  292 (297)
                      ++.+.++||++|.+|||++.......|-
T Consensus       236 s~~~~~itG~~i~vdGG~~~~~~~~~p~  263 (269)
T 3vtz_A          236 SDRSSFITGACLTVDGGLLSKLPISTPN  263 (269)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBCCCCCCC
T ss_pred             CCccCCCcCcEEEECCCccccCCCCCCC
Confidence            9999999999999999999887766553

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-46  Score=323.50  Aligned_cols=248  Identities=29%  Similarity=0.444  Sum_probs=215.3

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      +....++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            34556899999999999999999999999999999999999988777665544    66788999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc-ccccCCCCc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT-GLLGGLAQH  180 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~-~~~~~~~~~  180 (297)
                      +.++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||.. +..+.++..
T Consensus        93 ~~~~~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGIN--RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHcCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            999999999999999987  45567889999999999999999999999999999887789999999998 888888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++......      ..+ .........+. +++++|+|+|+++
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------~~~-~~~~~~~~~p~-~~~~~p~dvA~~v  242 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS------DPE-KLDYMLKRIPL-GRTGVPEDLKGVA  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT------CHH-HHHHHHHTCTT-SSCBCGGGGHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc------ChH-HHHHHHhhCCC-CCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999998764321      111 11112222333 7899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      +||+++...++||+++.+|||++
T Consensus       243 ~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          243 VFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHcCccccCCcCCeEEECCCCC
Confidence            99999988999999999999975

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.4e-46  Score=330.28  Aligned_cols=255  Identities=26%  Similarity=0.380  Sum_probs=213.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |+++||++|||||++|||++++++|+++|++|++++|+.+.+++..++.+.++.++.+|++++++++++++++.++++++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            56899999999999999999999999999999999999999988888877889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCcc----CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          110 DIMYNNAGVACKTPRSI----VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      |+||||||+... ...+    .+.+.++|++.+++|+.+++.++++++|.|.++ .|++|++||..+..+.+....|++|
T Consensus        81 D~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  158 (281)
T 3zv4_A           81 DTLIPNAGIWDY-STALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTAT  158 (281)
T ss_dssp             CEEECCCCCCCT-TCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred             CEEEECCCcCcc-ccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHHH
Confidence            999999998631 1122    244567899999999999999999999999764 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      |++++.|+++++.|+++. |+||+|+||+++|++.......... ...............+. +++.+|+|+|++++||+
T Consensus       159 Kaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~  236 (281)
T 3zv4_A          159 KHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFFA  236 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT-SSCCCGGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC-CCCCCHHHHHHHHHHhh
Confidence            999999999999999987 9999999999999986432110000 00011122223334444 89999999999999999


Q ss_pred             c-CCCCcccccEEEecCCcccccCC
Q 022418          265 S-DDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       265 ~-~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      + +.+.|+||++|.+|||+++....
T Consensus       237 s~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          237 TRGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             STTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             cccccccccCcEEEECCCCccccch
Confidence            9 78899999999999999876543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-46  Score=323.01  Aligned_cols=254  Identities=31%  Similarity=0.493  Sum_probs=215.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988777665544     567889999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .++++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|
T Consensus        87 ~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHHHSCCSEEEECCCCCC-CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HHHcCCCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            999999999999999863 2156778899999999999999999999999999987778999999999999998889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|++++||+||+|+||+++|++........... .............+. +++++|+|+|+++++
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~p~-~r~~~~~dvA~~v~~  243 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-NPRKAAEEFIQVNPS-KRYGEAPEIAAVVAF  243 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-CHHHHHHHHHTTCTT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh-hhhhHHHHHhccCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999875431110111 111111122222334 789999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++...++||++|.+|||+++
T Consensus       244 l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          244 LLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HTSGGGTTCCSCEEEESTTTTT
T ss_pred             HcCccccCCCCCEEEECCCccc
Confidence            9999889999999999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.5e-45  Score=320.57  Aligned_cols=252  Identities=29%  Similarity=0.393  Sum_probs=216.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988777665554    567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++|
T Consensus        83 ~g~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           83 FGGADILVNNAGTG--SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HSSCSEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            99999999999987  4556788899999999999999999999999999987777999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC--CHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV--DASRLLELVYST-GVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~dia~~~~~  262 (297)
                      |++++.+++.++.|++++||+||+|+||+++|++............  ..+......... .+. +++++|+|+|+++++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFVF  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998765432111100  011111212222 333 789999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++...+++|+++.+|||++.
T Consensus       240 l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          240 LCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HTSTTCTTCCSCEEEESTTCCC
T ss_pred             HcCccccCCCCcEEEECCCccc
Confidence            9999889999999999999764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.2e-46  Score=328.58  Aligned_cols=250  Identities=22%  Similarity=0.237  Sum_probs=214.2

Q ss_pred             CccCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHhCCCeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .+++++||++|||||++  |||++++++|+++|++|++++|+.+..+...   ++. ..+.++++|++|+++++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHH
Confidence            35679999999999997  9999999999999999999999976444332   333 34688999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          103 ISKHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .+++|++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+.+.
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence            99999999999999987310  156788999999999999999999999999999965  68999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|+++++.|++++||+||+|+||+|+|++......       .+..........+. +++.+|+|+|+++
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~pedvA~~v  252 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISD-------FHYILTWNKYNSPL-RRNTTLDDVGGAA  252 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHH-------HHHHHHHHHHHSTT-SSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccc-------hHHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999998754321       11122223333444 8999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccccCC
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +||+++.+.++||++|.+|||+++..-.
T Consensus       253 ~fL~s~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             HHHcCCccCCccCCEEEECCCccccCCc
Confidence            9999999999999999999999887443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.4e-46  Score=325.08  Aligned_cols=249  Identities=25%  Similarity=0.386  Sum_probs=202.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++||+++||||++|||++++++|+++|++|+++ +|+.+..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998 55666666555544   567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  184 (297)
                      +|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|++|++||..+. .+.++...|++
T Consensus        84 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a  160 (259)
T 3edm_A           84 FGEIHGLVHVAGGLI-ARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYAT  160 (259)
T ss_dssp             HCSEEEEEECCCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred             hCCCCEEEECCCccC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHH
Confidence            999999999999763 3456888999999999999999999999999999965  5899999999988 67788889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|++.++.|+++. |+||+|+||+++|++.......        ..........+. +++++|+|+|++++||+
T Consensus       161 sKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~p~-~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          161 SKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP--------EVRERVAGATSL-KREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh--------HHHHHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            9999999999999999886 9999999999999987654311        111112222333 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccCCCCC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      ++.+.++||++|.+|||++...++.-|
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~~~~~  257 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEGHHHH  257 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC------
T ss_pred             CccccCccCCEEEECCCcCCCCCCCCC
Confidence            999999999999999999988776543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=4.3e-46  Score=322.24  Aligned_cols=238  Identities=23%  Similarity=0.345  Sum_probs=210.6

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecC--CCHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDV--TKESDVSDAVDF  101 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~--s~~~~i~~~~~~  101 (297)
                      ....++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|+  +|++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            6 KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             CTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            345699999999999999999999999999999999999998887766554    34788999999  999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +.++++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+....
T Consensus        86 ~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLG-DVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA  164 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCC-CCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhCCCCCEEEECCccCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCch
Confidence            9999999999999999853 345688899999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|+++. |+||+|+||+++|++........                  ..+++.+|+|+|++++
T Consensus       165 Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~------------------~~~~~~~p~dva~~~~  225 (252)
T 3f1l_A          165 YAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTE------------------DPQKLKTPADIMPLYL  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTC------------------CGGGSBCTGGGHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCcc------------------chhccCCHHHHHHHHH
Confidence            9999999999999999999887 99999999999999865432110                  1145778999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ||+++.+.++||++|.+|||+...
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC----
T ss_pred             HHcCccccCCCCCEEEeCCCcCCC
Confidence            999999999999999999998654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-45  Score=318.08  Aligned_cols=240  Identities=33%  Similarity=0.502  Sum_probs=212.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++  +.++.+|++|+++++++++++.++++++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999999988887776653  7889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ....+.+.+.++|++.+++|+.+++.+++++.|.|++++.+++|++||.. ..+.+.+..|++||+++
T Consensus        79 d~lvn~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~  155 (245)
T 1uls_A           79 DGVVHYAGIT--RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGV  155 (245)
T ss_dssp             CEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHH
Confidence            9999999987  45567889999999999999999999999999999887789999999998 88888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+++|++....        ..+ .........+. +++++|+|+|+++++|+++...
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~-~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s~~~~  225 (245)
T 1uls_A          156 VGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--------PEK-VREKAIAATPL-GRAGKPLEVAYAALFLLSDESS  225 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--------CHH-HHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--------CHH-HHHHHHhhCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999986431        111 11112222333 7889999999999999999889


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      ++||+.+.+|||+..
T Consensus       226 ~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          226 FITGQVLFVDGGRTI  240 (245)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCcCCEEEECCCccc
Confidence            999999999999865

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.6e-47  Score=328.81  Aligned_cols=249  Identities=22%  Similarity=0.326  Sum_probs=204.7

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.   +.+++..+++   +.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999999987753   4455555544   56789999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +.++++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|+  +.|++|++||..+..+.+....
T Consensus        85 ~~~~~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~  160 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKV--LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYST  160 (262)
T ss_dssp             HHHHHCSEEEEEECCCCC--CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC
T ss_pred             HHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCch
Confidence            999999999999999987  456788899999999999999999999999999993  4689999999999988888999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|+++++.|++++||+||+|+||+|+|++......        ........... +.+++.+|+|+|++++
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~-~~~r~~~pedvA~~v~  231 (262)
T 3ksu_A          161 YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET--------KESTAFHKSQA-MGNQLTKIEDIAPIIK  231 (262)
T ss_dssp             -----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc--------hHHHHHHHhcC-cccCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999998654211        11111122222 3488999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccCCCC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      ||+++ ..++||++|.+|||+......+.
T Consensus       232 ~L~s~-~~~itG~~i~vdGg~~~~~~~~~  259 (262)
T 3ksu_A          232 FLTTD-GWWINGQTIFANGGYTTREGHHH  259 (262)
T ss_dssp             HHHTT-TTTCCSCEEEESTTCCCC-----
T ss_pred             HHcCC-CCCccCCEEEECCCccCCCcccc
Confidence            99999 89999999999999987755443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-46  Score=329.81  Aligned_cols=247  Identities=29%  Similarity=0.459  Sum_probs=205.9

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHH---hCCCeeEEEecCCC
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ------------HQLGQQTAKE---LGPNATFIACDVTK   91 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~------------~~~~~~~~~~---~~~~v~~~~~D~s~   91 (297)
                      ....+++||++|||||++|||++++++|+++|++|++++|+            .+.+++..+.   .+.++.++.+|++|
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   85 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD   85 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            34567999999999999999999999999999999999987            4455544433   36789999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecc
Q 022418           92 ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASV  170 (297)
Q Consensus        92 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~  170 (297)
                      +++++++++++.++++++|+||||||+..  ..    .+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~--~~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAP--MS----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCC--CS----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC--CC----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            99999999999999999999999999873  21    25899999999999999999999999997654 7899999999


Q ss_pred             cccccC----CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH-----HH
Q 022418          171 TGLLGG----LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL-----VY  241 (297)
Q Consensus       171 ~~~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~  241 (297)
                      .+..+.    ++...|++||++++.|++.++.|++++||+||+|+||+|+|++..........    ......     ..
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~~  235 (278)
T 3sx2_A          160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWL----AKMAAATDTPGAM  235 (278)
T ss_dssp             GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHH----HHHHHHCC--CTT
T ss_pred             HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHH----hhccchhhhhhhh
Confidence            998876    66778999999999999999999999999999999999999987643221100    000000     01


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          242 STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       242 ~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ....+ +++++|+|+|++++||+++.+.++||++|.+|||+++
T Consensus       236 ~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          236 GNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             hhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            12223 6889999999999999999999999999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1e-45  Score=323.52  Aligned_cols=251  Identities=23%  Similarity=0.348  Sum_probs=211.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988777665554   567889999999999999999999999


Q ss_pred             c-CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          106 H-NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      + +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        96 ~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (273)
T 1ae1_A           96 FDGKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA  173 (273)
T ss_dssp             TTSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCcEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHH
Confidence            9 8999999999987  455678899999999999999999999999999998777799999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|++.++.|++++||+||+|+||+++|++........  ... ...........+. +++++|+|+|+++.||+
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~-~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~  249 (273)
T 1ae1_A          174 SKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN--PHQ-KEEIDNFIVKTPM-GRAGKPQEVSALIAFLC  249 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------C-HHHHHHHHHHSTT-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc--cCc-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999865432110  001 1111122223344 78999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++...++||+++.+|||++..
T Consensus       250 s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          250 FPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CccccCcCCCEEEECCCcccC
Confidence            998899999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-46  Score=323.80  Aligned_cols=239  Identities=29%  Similarity=0.411  Sum_probs=208.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++||++|||||++|||++++++|+++|++|++++++. +.+++..+++   +.++.++.+|++|+++++++++++.++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999997665 4555554443   678899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-CCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-~~~~~~Y~~  184 (297)
                      +|++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+ .+++..|++
T Consensus       107 ~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          107 LGGLDILVNSAGIW--HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             cCCCcEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            99999999999987  5667889999999999999999999999999999954  689999999877655 678899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.|++.++.|++++||+||+|+||+|+|++.....         +. .+......+. +++++|+|+|++++||+
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---------~~-~~~~~~~~~~-~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---------DH-AEAQRERIAT-GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---------SS-HHHHHHTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---------hh-HHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999865311         00 1112223334 88999999999999999


Q ss_pred             cCCCCcccccEEEecCCcc
Q 022418          265 SDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++.+.++||++|.+|||++
T Consensus       252 s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CcccCCccCCEEEeCcCcc
Confidence            9999999999999999975

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-45  Score=321.92  Aligned_cols=244  Identities=31%  Similarity=0.470  Sum_probs=210.5

Q ss_pred             ccCCCCCEEEEEcCC-CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAA-SGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas-~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+++++|+++||||+ +|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            457999999999998 59999999999999999999999999888777665    3578999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|+++ ..+++|++||..+..+.+++..|
T Consensus        97 ~~~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  174 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLG--GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY  174 (266)
T ss_dssp             HHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHhCCCcEEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence            9999999999999987  45668889999999999999999999999999999876 67899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|++++||+||+|+||+++|++......        +..........+ .+++++|+|+|++++|
T Consensus       175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~-~~r~~~~~dva~~i~~  245 (266)
T 3o38_A          175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--------SELLDRLASDEA-FGRAAEPWEVAATIAF  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------------CCT-TSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--------HHHHHHHHhcCC-cCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998765421        111122222233 3889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcc
Q 022418          263 LASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      |+++...++||++|.+|||++
T Consensus       246 l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          246 LASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHSGGGTTCCSCEEEESSCCC
T ss_pred             HcCccccCccCCEEEEcCCcC
Confidence            999988999999999999974

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2e-45  Score=324.83  Aligned_cols=248  Identities=23%  Similarity=0.245  Sum_probs=208.7

Q ss_pred             ccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQ---TAKELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~---~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +.+++||++|||||+  +|||++++++|+++|++|++++|+.+..+.   ..++. .++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHH
Confidence            356999999999999  559999999999999999999999643332   22333 468899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          104 SKHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      ++++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+.+..
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~  182 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV  182 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence            999999999999998731  0356788999999999999999999999999999964  689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|+++++.|++++||+||+|+||+|+|++.....       ..+..........+. +++++|+|+|++++
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~pedvA~~v~  254 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-------DFRYILKWNEYNAPL-RRTVTIDEVGDVGL  254 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-------CHHHHHHHHHHHSTT-SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-------chHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999865431       112222333334444 88999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ||+++.+.++||++|.+|||+++...
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             HHcCccccCCcceEEEECCCcccCCC
Confidence            99999999999999999999998743

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2e-45  Score=319.44  Aligned_cols=247  Identities=24%  Similarity=0.355  Sum_probs=215.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999999988777665554   5578899999999999999999999999


Q ss_pred             -CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          107 -NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                       +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++|
T Consensus        85 ~g~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           85 HGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence             8999999999987  4556788999999999999999999999999999987778999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHH--HHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLL--ELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.+++.++.|++++||+||+|+||+++|++......      ......  .......+. +++++|+|+|+++++|
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l  235 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ------DPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT------SHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhcc------ChhhHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999998654321      111111  112222333 7899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...++||+++.+|||++..
T Consensus       236 ~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          236 CFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCccccCCCCCEEEECCCcccc
Confidence            9988899999999999998653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.4e-46  Score=326.34  Aligned_cols=244  Identities=30%  Similarity=0.419  Sum_probs=211.7

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.++        ....+.+|+++.+++.++++++.++++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------ADLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------CSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------hhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999999876432        124458999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        94 ~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  171 (266)
T 3uxy_A           94 RLDIVVNNAGVI--SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKA  171 (266)
T ss_dssp             CCCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHH
Confidence            999999999987  456688899999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.|++++||+||+|+||+++|++........  ....+..........+. +++++|+|+|++++||+++.
T Consensus       172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKR--GFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHT--TCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcc--cccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999876554321  12233333333344444 89999999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.++||++|.+|||+++
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          249 ARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             hcCCcCCEEEECcCEeC
Confidence            99999999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.1e-45  Score=326.27  Aligned_cols=243  Identities=28%  Similarity=0.425  Sum_probs=211.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH-HH---HHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ-TA---KELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+...+ ..   +..+.++.++.+|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998764332 22   223668899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.+....|++|
T Consensus       123 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  199 (291)
T 3ijr_A          123 LGSLNILVNNVAQQY-PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSAT  199 (291)
T ss_dssp             HSSCCEEEECCCCCC-CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHH
Confidence            999999999999863 3446778899999999999999999999999999954  5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+|+|++......       .+. ........ +.+++++|+|+|++++||++
T Consensus       200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~~-p~~r~~~p~dvA~~v~~L~s  270 (291)
T 3ijr_A          200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-------EKK-VSQFGSNV-PMQRPGQPYELAPAYVYLAS  270 (291)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-------HHH-HHHTTTTS-TTSSCBCGGGTHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-------HHH-HHHHHccC-CCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998754321       111 11222223 34889999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.+.++||++|.+|||+++
T Consensus       271 ~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          271 SDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             GGGTTCCSCEEEESSSCCC
T ss_pred             CccCCCcCCEEEECCCccc
Confidence            9999999999999999875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-45  Score=319.58  Aligned_cols=249  Identities=29%  Similarity=0.450  Sum_probs=212.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL--GQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~--~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.  +++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999999999999877  66665554   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC-ceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++. +++|++||..+..+.++...|++||
T Consensus        81 ~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           81 GFDVLVNNAGIA--QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             CCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence            999999999987  4556788999999999999999999999999999987665 8999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.|++.++.|++++||+||+|+||+++|++..........  ....+..........+. +++++|+|+|++++||+
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~  237 (258)
T 3a28_C          159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAGLVSFLA  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC-CCccCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999987643211000  00001111222222334 78999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.++||+++.+|||+.+
T Consensus       238 s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          238 SENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SGGGTTCCSCEEEESSSSCC
T ss_pred             CcccCCCCCCEEEECCCEec
Confidence            99889999999999999753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.8e-46  Score=321.35  Aligned_cols=250  Identities=29%  Similarity=0.452  Sum_probs=207.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++|+++||||++|||++++++|+++|++|++++|+.+. +++..+++    +.++.++.+|++|+++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999999877 66665544    5678899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence            9999999999986  45567888999999999999999999999999999877779999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHH-HhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELV-YSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++++.|++.++.|++++||+||+|+||+++|++..........  ....+...... ....+. +++++|+|+|++++||
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~l  238 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999987543221000  00001111111 122333 7899999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...++||+++.+|||++.
T Consensus       239 ~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhcCCCCCEEEECCCccC
Confidence            999889999999999999864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-45  Score=319.54  Aligned_cols=246  Identities=23%  Similarity=0.347  Sum_probs=211.6

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ....+.++|++|||||++|||++++++|+++|++|++++ |+.+..++..+++   +.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999988 6665555544433   567899999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .++++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|
T Consensus        86 ~~~~g~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGIT--RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HHHTCCEEEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred             HHhcCCCCEEEECCCCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence            99999999999999987  4566888999999999999999999999999999988788999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|++++||+|++|+||+++|++.....        .+. ........+. +++.+|+|+|++++|
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~-~~~~~~~~~~-~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--------PDV-LEKIVATIPV-RRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--------HHH-HHHHHHHSTT-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC--------HHH-HHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999875432        122 2222233334 889999999999999


Q ss_pred             HhcCCCCcccccEEEecCCccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+++...++||++|.+|||+++
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            9999989999999999999875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-45  Score=324.97  Aligned_cols=251  Identities=26%  Similarity=0.384  Sum_probs=208.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHH---hCCCeeEEEecCCCH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ------------HQLGQQTAKE---LGPNATFIACDVTKE   92 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~------------~~~~~~~~~~---~~~~v~~~~~D~s~~   92 (297)
                      .+++++||++|||||++|||++++++|+++|++|++++|+            .+.+++...+   .+.++.++.+|++|+
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            4567999999999999999999999999999999999997            4444444333   367899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      ++++++++++.++++++|+||||||...  ..  .+.+.++|++.+++|+.+++.++++++|.|  ++.+++|++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~--~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICP--LG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC--CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCc--cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchh
Confidence            9999999999999999999999999873  32  237889999999999999999999999999  34689999999988


Q ss_pred             cccC-----------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH--HhhcC---CCHHHH
Q 022418          173 LLGG-----------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--QIYAG---VDASRL  236 (297)
Q Consensus       173 ~~~~-----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~---~~~~~~  236 (297)
                      ..+.           ++...|++||++++.|++.++.|++++||+||+|+||+|+|++......  .....   ......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            7665           5667899999999999999999999999999999999999998864321  11111   111111


Q ss_pred             HHH-HHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          237 LEL-VYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       237 ~~~-~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ... ......+ +++++|+|+|++++||+++.+.|+||++|.+|||+++.
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            111 1222233 88999999999999999999999999999999998764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7.7e-46  Score=323.93  Aligned_cols=247  Identities=29%  Similarity=0.393  Sum_probs=210.2

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKE---LGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ....|+++||+++||||++|||++++++|+++|++|++++|+.+ ..+...+.   .+.++.++.+|++|++++.+++++
T Consensus        21 ~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           21 QSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             ---CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999544 44443333   366899999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +.+.++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...
T Consensus       101 ~~~~~g~id~li~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVV--RDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTN  178 (271)
T ss_dssp             HHHHHSSCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCcC--CCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchH
Confidence            999999999999999987  456677899999999999999999999999999998877899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.+++.++.|++++||+|++|+||+++|++.......         ......... +.+++.+|+|+|++++
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~-~~~~~~~p~dvA~~i~  248 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE---------LKADYVKNI-PLNRLGSAKEVAEAVA  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------CGGGC-TTCSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH---------HHHHHHhcC-CcCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987654221         111112223 3388999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +|+++...++||++|.+|||+.+
T Consensus       249 ~l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          249 FLLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHhCCCcCCCcCCEEEeCCCeeC
Confidence            99999999999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-45  Score=318.53  Aligned_cols=244  Identities=32%  Similarity=0.447  Sum_probs=206.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+. +.+++..++.+.++.++.+|++|+++++++++++.+++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999998 7666555555678899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||++
T Consensus        83 id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (249)
T 2ew8_A           83 CDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA  160 (249)
T ss_dssp             CCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHH
Confidence            99999999987  4556788999999999999999999999999999987778999999999999998889999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchh-hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVM-EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++.|++.++.|++++||+||+|+||+++|++.. ..... .    .+.... ..  .+. +++++|+|+|++++||+++.
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~----~~~~~~-~~--~~~-~~~~~p~dva~~~~~l~s~~  231 (249)
T 2ew8_A          161 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-M----FDVLPN-ML--QAI-PRLQVPLDLTGAAAFLASDD  231 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------C-TT--SSS-CSCCCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-h----hhHHHH-hh--Ccc-CCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999865 21100 0    000000 00  233 78999999999999999988


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..++||+++.+|||++.
T Consensus       232 ~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          232 ASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             GTTCCSCEEEESSSCCC
T ss_pred             cCCCCCcEEEECCCccC
Confidence            89999999999999753

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.1e-46  Score=323.21  Aligned_cols=243  Identities=27%  Similarity=0.407  Sum_probs=197.3

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.+   +..++++.++.++.+|++|+++++++++.+.+ ++
T Consensus         3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g   78 (257)
T 3tl3_A            3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGDRARFAAADVTDEAAVASALDLAET-MG   78 (257)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hC
Confidence            357899999999999999999999999999999999999654   33445577899999999999999999998876 89


Q ss_pred             CccEEEECccCCCCCC--CccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC--------CCCceEEEEecccccccCC
Q 022418          108 QLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP--------RRSGCILCTASVTGLLGGL  177 (297)
Q Consensus       108 ~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~g~iv~vss~~~~~~~~  177 (297)
                      ++|+||||||......  ....+.+.++|++.+++|+.+++.++++++|.|.+        ++.|++|++||..+..+.+
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI  158 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence            9999999999762100  11234789999999999999999999999999987        5678999999999999988


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ++..|++||++++.|++.++.|++++||+||+|+||+|+|++.....        .+ .........+..+++++|+|+|
T Consensus       159 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--------~~-~~~~~~~~~~~~~r~~~p~dva  229 (257)
T 3tl3_A          159 GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP--------EE-ARASLGKQVPHPSRLGNPDEYG  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C--------HH-HHHHHHHTSSSSCSCBCHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc--------HH-HHHHHHhcCCCCCCccCHHHHH
Confidence            88999999999999999999999999999999999999999876432        11 1222223333338899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++++||+++  .++||++|.+|||+++.
T Consensus       230 ~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          230 ALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            999999986  79999999999999865

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1e-45  Score=318.66  Aligned_cols=241  Identities=36%  Similarity=0.523  Sum_probs=210.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999999999 777666655544   5678899999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+....|++||
T Consensus        81 g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (246)
T 2uvd_A           81 GQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAK  158 (246)
T ss_dssp             SCCCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHH
Confidence            9999999999987  45567889999999999999999999999999999877779999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|+.++||+||+|+||+++|++....        ..... .......+. +++++|+|+|+++++|+++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~~~~-~~~~~~~p~-~~~~~~~dvA~~~~~l~s~  228 (246)
T 2uvd_A          159 AGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL--------DENIK-AEMLKLIPA-AQFGEAQDIANAVTFFASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC--------CTTHH-HHHHHTCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc--------CHHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999986431        11111 111222333 7899999999999999999


Q ss_pred             CCCcccccEEEecCCcc
Q 022418          267 DAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~  283 (297)
                      ...++||+++.+|||++
T Consensus       229 ~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          229 QSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCCCCEEEECcCcc
Confidence            88999999999999975

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=4.6e-45  Score=320.09  Aligned_cols=251  Identities=27%  Similarity=0.406  Sum_probs=216.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999999988777665554   56788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh--ccCCCCceEEEEecccccccCCCCccchhh
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.  |++++.++||++||..+..+.+....|++|
T Consensus        99 ~iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 2rhc_B           99 PVDVLVNNAGRP--GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS  176 (277)
T ss_dssp             SCSEEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHH
Confidence            999999999987  4556788999999999999999999999999998  876667999999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      |++++.|++.++.|+++.||+||+|+||+++|++.......  .......+..........+. +++++|+|+|+++++|
T Consensus       177 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dvA~~v~~l  255 (277)
T 2rhc_B          177 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYL  255 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999987654221  00111112222222223334 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...++||+++.+|||++.
T Consensus       256 ~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          256 IGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCchhcCCCCcEEEECCCccc
Confidence            999888999999999999764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.6e-45  Score=317.72  Aligned_cols=248  Identities=33%  Similarity=0.458  Sum_probs=214.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988777665544   557888999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++|
T Consensus        89 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  167 (260)
T 2zat_A           89 HGGVDILVSNAAVNP-FFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS  167 (260)
T ss_dssp             HSCCCEEEECCCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            999999999999752 2345778899999999999999999999999999987778999999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+++|++......      ..+ .........+. +++++|+|+|+++.+|++
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~-~~~~~~~~~~~-~~~~~~~dva~~v~~l~s  239 (260)
T 2zat_A          168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM------DKA-RKEYMKESLRI-RRLGNPEDCAGIVSFLCS  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS------SHH-HHHHHHHHHTC-SSCBCGGGGHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc------ChH-HHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999998754321      111 11111222233 789999999999999999


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +...+++|+++.+|||....
T Consensus       240 ~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          240 EDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTCCCC
T ss_pred             cccCCccCCEEEECCCcccc
Confidence            98899999999999998653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.9e-45  Score=318.50  Aligned_cols=238  Identities=19%  Similarity=0.244  Sum_probs=199.1

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+|++++|++|||||++|||++++++|+++|++|++++|+.+.+.+..++.+  +.++.+|++|+++++++++++.++++
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999999987666555543  78899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||...  ... .+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        99 ~iD~lv~nAg~~~--~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  175 (260)
T 3gem_A           99 SLRAVVHNASEWL--AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKA  175 (260)
T ss_dssp             CCSEEEECCCCCC--CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCccC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHH
Confidence            9999999999873  322 5677899999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.|+++ +|+||+|+||+++|++....           ..........+. +++.+|+|+|++++||+  .
T Consensus       176 a~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~-----------~~~~~~~~~~p~-~r~~~~edva~~v~~L~--~  240 (260)
T 3gem_A          176 GLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDA-----------AYRANALAKSAL-GIEPGAEVIYQSLRYLL--D  240 (260)
T ss_dssp             HHHHHHHHHHHHHTT-TCEEEEEEECTTCC--------------------------CCS-CCCCCTHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCH-----------HHHHHHHhcCCC-CCCCCHHHHHHHHHHHh--h
Confidence            999999999999998 69999999999999865311           111111222333 88999999999999999  4


Q ss_pred             CCcccccEEEecCCcccc
Q 022418          268 AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~  285 (297)
                      ..++||++|.+|||+++.
T Consensus       241 ~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          241 STYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             CSSCCSCEEEESTTTTTC
T ss_pred             CCCCCCCEEEECCCcccC
Confidence            589999999999999864

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.6e-45  Score=319.89  Aligned_cols=245  Identities=26%  Similarity=0.370  Sum_probs=214.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..|++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++++.+.
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3467999999999999999999999999999999999999988877776652  26888899999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC----ceEEEEecccccccCCCCc-
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS----GCILCTASVTGLLGGLAQH-  180 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----g~iv~vss~~~~~~~~~~~-  180 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.    ++||++||..+..+.+... 
T Consensus       103 ~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~  180 (276)
T 2b4q_A          103 SARLDILVNNAGTS--WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY  180 (276)
T ss_dssp             CSCCSEEEECCCCC--CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCT
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcc
Confidence            99999999999987  4456788899999999999999999999999999976554    8999999999988888888 


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh--cCCCCCCCCCHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--TGVLEGTHCEPNDIAN  258 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dia~  258 (297)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++.......         .......  ..+. +++++|+|+|+
T Consensus       181 ~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~p~-~r~~~p~dvA~  250 (276)
T 2b4q_A          181 AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND---------PQALEADSASIPM-GRWGRPEEMAA  250 (276)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC---------HHHHHHHHHTSTT-SSCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh---------HHHHHHhhcCCCC-CCcCCHHHHHH
Confidence            9999999999999999999999999999999999999987653211         0111111  2333 78999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++++|+++...++||++|.+|||+++
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCCCCEEEeCCCccC
Confidence            99999999889999999999999764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-45  Score=315.83  Aligned_cols=248  Identities=34%  Similarity=0.500  Sum_probs=212.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999988777665554   56788999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .+++|++||..+..+.+....|++||+++
T Consensus        82 ~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            999999986  455678889999999999999999999999999998766 68999999999999988889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +.|++.++.|++++||+||+|+||+++|++..........  ....+..........+. +++++|+|+|+++.||+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999987643211000  00011111222223334 78999999999999999998


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.++||+++.+|||+++
T Consensus       239 ~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          239 SDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            89999999999999763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=8.8e-46  Score=327.33  Aligned_cols=245  Identities=27%  Similarity=0.348  Sum_probs=209.2

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHH---HHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ--LGQQTA---KELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+  ..++..   ++.+.++.++.+|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998733  333332   3346789999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+....|+
T Consensus       124 ~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EALGGLDILALVAGKQT-AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHHTCCCEEEECCCCCC-CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence            99999999999999863 3456788999999999999999999999999999954  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+||+|+||+|+|++......      ..+. ........ +.+++++|+|+|++++||
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~------~~~~-~~~~~~~~-p~~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ------TQDK-IPQFGQQT-PMKRAGQPAELAPVYVYL  272 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS------CGGG-STTTTTTS-TTSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC------CHHH-HHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997432110      0000 01111222 338899999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++.+.++||++|.+|||+++
T Consensus       273 ~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          273 ASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            999999999999999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-44  Score=314.91  Aligned_cols=253  Identities=31%  Similarity=0.447  Sum_probs=216.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..++.++.+|++|+++++++++++.+++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            35688999999999999999999999999999999999998888777766557888999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .+++|++||..+..+.++...|++||+
T Consensus        87 iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (263)
T 3ak4_A           87 FDLLCANAGVS--TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKF  164 (263)
T ss_dssp             CCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCcC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHH
Confidence            99999999987  455678889999999999999999999999999998766 699999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh--hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.+++.++.|++++||+||+|+||+++|++........  ......+..........+. +++++|+|+|+++++|++
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s  243 (263)
T 3ak4_A          165 AVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADVVVFLAS  243 (263)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865432100  0001112222222223334 789999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...+++|+++++|||++.
T Consensus       244 ~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          244 DAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GGGTTCCSCEEEESSSSSC
T ss_pred             ccccCCCCCEEEECcCEeC
Confidence            8888999999999999753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-45  Score=315.40  Aligned_cols=248  Identities=29%  Similarity=0.444  Sum_probs=212.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+. ++..+++. . .++.+|++|+++++++++++.++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999999999887 66666654 4 788999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||+++
T Consensus        79 D~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  156 (256)
T 2d1y_A           79 DVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL  156 (256)
T ss_dssp             CEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHH
Confidence            9999999987  45567788999999999999999999999999999887789999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+++|++..........   .+..........+. +++++|+|+|+++++|+++...
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~s~~~~  232 (256)
T 2d1y_A          157 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPD---PERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKAS  232 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-----------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccC---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999986543110000   01111112222333 7899999999999999999888


Q ss_pred             cccccEEEecCCccccc
Q 022418          270 YVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~  286 (297)
                      +++|+++.+|||.+...
T Consensus       233 ~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          233 FITGAILPVDGGMTASF  249 (256)
T ss_dssp             TCCSCEEEESTTGGGBC
T ss_pred             CCCCCEEEECCCccccc
Confidence            99999999999987653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-45  Score=318.14  Aligned_cols=249  Identities=30%  Similarity=0.484  Sum_probs=213.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999988877766554   55788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||... ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++.|++|++||..+..+.+....|++||+
T Consensus        84 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           84 KIDFLFNNAGYQG-AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             CCCEEEECCCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence            9999999999752 234577889999999999999999999999999998777899999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh----cC-CC-HHH-HHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY----AG-VD-ASR-LLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~-~~-~~~-~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      +++.|++.++.|++++||+||+|+||+++|++.........    .. .. .+. .........+. +++++|+|+|+++
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v  241 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999998764311100    00 11 111 22222233344 8899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCC
Q 022418          261 LYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      +||+++.+.++||++|.+|||
T Consensus       242 ~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHcCchhcCcCCcEEecCCC
Confidence            999999889999999999998

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-46  Score=327.49  Aligned_cols=263  Identities=24%  Similarity=0.386  Sum_probs=216.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CC---CeeEEEecCCCHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP---NATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~---~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.   ++.++.+|++|++++++++++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998877766554   33   688999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCc--cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-CC
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-LA  178 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-~~  178 (297)
                      +.++++++|+||||||..  ...+  +.+.+.++|++.+++|+.+++.+++++.|.|.+++ |+||++||..+..+. ++
T Consensus       100 ~~~~~g~iD~lvnnAG~~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~  176 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGAN--LADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG  176 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC--CCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT
T ss_pred             HHHhcCCCCEEEECCCcC--cCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC
Confidence            999999999999999987  3344  77889999999999999999999999999997666 999999999998887 78


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      ...|++||++++.|++.++.|++++||+||+|+||+++|++.........................+ .+++++|+|+|+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~pedvA~  255 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-VGHCGKPEEIAN  255 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-TSSCBCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC-CCCCcCHHHHHH
Confidence            8899999999999999999999999999999999999999865431000000000111111112223 378999999999


Q ss_pred             HHHHHhcCC-CCcccccEEEecCCcccccCCCCCCCc
Q 022418          259 AALYLASDD-AKYVSGHNLVVDGGFTSFKNLKLPAPV  294 (297)
Q Consensus       259 ~~~~l~~~~-~~~~tG~~i~vdgG~~~~~~~~~~~~~  294 (297)
                      +++||+++. ..++||++|.+|||++....+....+.
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~  292 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLM  292 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHH
T ss_pred             HHHHHhCCcccCCccCcEEEECCCccccccccccchh
Confidence            999999987 889999999999999877555444333

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-45  Score=318.51  Aligned_cols=243  Identities=30%  Similarity=0.484  Sum_probs=210.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..++.++.+|++|+++++++++++.++++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999999999988888877776678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.| ++ .+++|++||..+. +.+....|++||+++
T Consensus        82 D~lvnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           82 HGVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             CEEEEGGGGT--TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred             cEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence            9999999987  45567788999999999999999999999999999 54 7999999999988 777788999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+++|++....        ..+ .........+. +++++|+|+|+.+++|+++...
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~-~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~~~  226 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--------PPW-AWEQEVGASPL-GRAGRPEEVAQAALFLLSEESA  226 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--------CHH-HHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--------CHH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999986532        111 11112222333 7899999999999999999889


Q ss_pred             cccccEEEecCCcccccC
Q 022418          270 YVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~  287 (297)
                      ++||+.+.+|||++....
T Consensus       227 ~~tG~~i~vdgG~~~~~~  244 (263)
T 2a4k_A          227 YITGQALYVDGGRSIVGP  244 (263)
T ss_dssp             TCCSCEEEESTTTTTC--
T ss_pred             CCcCCEEEECCCccccCC
Confidence            999999999999887643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=7.1e-45  Score=321.07  Aligned_cols=243  Identities=21%  Similarity=0.242  Sum_probs=209.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh----CCCeeEEEecCCCHH----------
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL----GPNATFIACDVTKES----------   93 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~----~~~v~~~~~D~s~~~----------   93 (297)
                      ++++++|+++||||++|||++++++|+++|++|++++ |+.+.+++..+++    +.++.++++|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4568999999999999999999999999999999999 9988777665544    567899999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCC--------------HHHHHHHHHHhhhHHHHHHHHH
Q 022418           94 -------DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN--------------LEVFDQVMRINVRGVVAGIKHS  152 (297)
Q Consensus        94 -------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  152 (297)
                             ++.++++++.++++++|+||||||..  ...++.+.+              .++|++++++|+.+++.+++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSF--YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC--CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCC--CCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   99999999999999999999999987  445577778              8999999999999999999999


Q ss_pred             HHhccCCC------CceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH
Q 022418          153 TRVMIPRR------SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ  226 (297)
Q Consensus       153 ~~~l~~~~------~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~  226 (297)
                      +|.|++++      .++||++||..+..+.+++..|++||++++.|++.++.|++++||+||+|+||+++|++ .  .  
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~--  236 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M--  236 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S--
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C--
Confidence            99998766      69999999999999999999999999999999999999999999999999999999998 3  2  


Q ss_pred             hhcCCCHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          227 IYAGVDASRLLELVYSTGVLEG-THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                           ..+ .........+. + ++.+|+|+|++++||+++...++||++|.+|||+++.
T Consensus       237 -----~~~-~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          237 -----PPA-VWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -----CHH-HHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -----CHH-HHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence                 111 11112223334 5 8899999999999999998899999999999998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.9e-45  Score=321.12  Aligned_cols=243  Identities=25%  Similarity=0.403  Sum_probs=209.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+++|+++||||++|||++++++|+++|++|++++ |+.+..++...+.   +.++.++.+|++|+++++++++++.+++
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999998 4555555444433   5678999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+++..|++||
T Consensus       102 g~id~li~nAg~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  179 (269)
T 3gk3_A          102 GKVDVLINNAGIT--RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAK  179 (269)
T ss_dssp             SCCSEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcC--CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHH
Confidence            9999999999987  45567889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|++++||+||+|+||+++|++..........        ....... +.+++.+|+|+|+++++|+++
T Consensus       180 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--------~~~~~~~-~~~~~~~p~dvA~~v~~L~s~  250 (269)
T 3gk3_A          180 AGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLE--------AKILPQI-PVGRLGRPDEVAALIAFLCSD  250 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCSGGGC-TTSSCBCHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHH--------HHhhhcC-CcCCccCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999987654221110        0111222 338889999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...++||++|++|||+.+
T Consensus       251 ~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          251 DAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             TCTTCCSCEEEESTTSCC
T ss_pred             CcCCeeCcEEEECCCEeC
Confidence            999999999999999875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.4e-45  Score=322.22  Aligned_cols=238  Identities=26%  Similarity=0.286  Sum_probs=209.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHH---hCCCeeEEEecCCCHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-------GQQTAKE---LGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-------~~~~~~~---~~~~v~~~~~D~s~~~~i~~   97 (297)
                      .+|++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..++   .+.++.++++|++|++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            3478999999999999999999999999999999999999763       3333333   36789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-  176 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-  176 (297)
                      +++++.++++++|+||||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.+++|++||..+..+. 
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  160 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAI--NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW  160 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCC--CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC
Confidence            9999999999999999999987  5667889999999999999999999999999999998888999999999988875 


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-CccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 022418          177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF-AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND  255 (297)
Q Consensus       177 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  255 (297)
                      +....|++||++++.|++.++.|++++||+||+|+|| +++|++.......                . .+.+++.+|+|
T Consensus       161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~----------------~-~~~~r~~~ped  223 (285)
T 3sc4_A          161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG----------------D-EAMARSRKPEV  223 (285)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS----------------C-CCCTTCBCTHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc----------------c-ccccCCCCHHH
Confidence            6778999999999999999999999999999999999 7999876543211                1 12378899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +|++++||+++.. ++||+.+.+|||+...
T Consensus       224 vA~~~~~l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          224 YADAAYVVLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHHHHHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HHHHHHHHhCCcc-cccceEEEEcCchhcc
Confidence            9999999999987 9999999999987754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-45  Score=318.48  Aligned_cols=246  Identities=17%  Similarity=0.194  Sum_probs=208.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ||+++||||++|||++++++|+++|  +.|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            6899999999999999999999985  78999999999988888887778999999999999999999999999999999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++ |++|++||..+..+.+++..|++||++++.
T Consensus        82 lvnnAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           82 LVANAGVLE-PVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEEECCCCC-CCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EEECCcccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            999999863 345688899999999999999999999999999997655 999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC-Cc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA-KY  270 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~-~~  270 (297)
                      |++.++.|+  .||+||+|+||+++|++..............+..........+. +++++|+|+|++++||+++.. .+
T Consensus       160 ~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dva~~v~~L~s~~~~~~  236 (254)
T 3kzv_A          160 FAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN-NQLLDSSVPATVYAKLALHGIPDG  236 (254)
T ss_dssp             HHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT-C----CHHHHHHHHHHHHHCCCGG
T ss_pred             HHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc-CCcCCcccHHHHHHHHHhhcccCC
Confidence            999999998  68999999999999998764322111010112222223333344 889999999999999999984 99


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      +||+.|.+|||...
T Consensus       237 itG~~i~vdg~~~~  250 (254)
T 3kzv_A          237 VNGQYLSYNDPALA  250 (254)
T ss_dssp             GTTCEEETTCGGGG
T ss_pred             CCccEEEecCcccc
Confidence            99999999999764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-45  Score=317.77  Aligned_cols=248  Identities=23%  Similarity=0.332  Sum_probs=206.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ-QTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.+|+++||||++|||++++++|+++|++|++++|+.+... ...+..   +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4667899999999999999999999999999999988765433 333332   457899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc-cc-cccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV-TG-LLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~-~~-~~~~~~~~~Y~  183 (297)
                      ++++|+||||||.......++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||. .+ ..+.++...|+
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence            99999999999954325566888999999999999999999999999999988788999999988 44 55667778999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+|++|+||+++|++........         ........+. +++++|+|+|+++++|
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~p~-~r~~~~~dva~~v~~l  232 (264)
T 3i4f_A          163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEA---------RQLKEHNTPI-GRSGTGEDIARTISFL  232 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHH---------HHC---------CCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHH---------HHHHhhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876543221         1111122233 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccC
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +++...++||++|.+|||++....
T Consensus       233 ~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          233 CEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             HSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             cCcccCCCCCcEEEEcCceeeccC
Confidence            999889999999999999998744

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.6e-45  Score=317.67  Aligned_cols=243  Identities=35%  Similarity=0.497  Sum_probs=214.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999999888887777666788999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (254)
T 1hdc_A           82 GLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVR  159 (254)
T ss_dssp             EEEECCCCC--CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHH
Confidence            999999987  445677889999999999999999999999999998777899999999999998888999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhcCCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIANAALYLASDDAK  269 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dia~~~~~l~~~~~~  269 (297)
                      .|++.++.|+.++||+||+|+||+++|++......    .... .    .....+. ++++ +|+|+|+++++|+++.+.
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~-~----~~~~~p~-~~~~~~~~dvA~~v~~l~s~~~~  229 (254)
T 1hdc_A          160 GLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI----RQGE-G----NYPNTPM-GRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC----CCST-T----SCTTSTT-SSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhhhcCeEEEEEecccCcCccccccch----hHHH-H----HHhcCCC-CCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999998654211    0000 0    0111223 6788 999999999999999888


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      +++|+.+.+|||+...
T Consensus       230 ~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          230 YVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TCCSCEEEESTTTTTS
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998763

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4e-45  Score=320.35  Aligned_cols=261  Identities=30%  Similarity=0.426  Sum_probs=202.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++      +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998887776655      24688899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCC----CHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc-cccCCCC
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDL----NLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG-LLGGLAQ  179 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~-~~~~~~~  179 (297)
                      +++++|+||||||..  ...++.+.    +.++|++.+++|+.+++.+++++.|.|++++ +++|++||..+ ..+.++.
T Consensus        83 ~~g~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAA--IPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCC--CCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            999999999999986  34456666    8999999999999999999999999997655 99999999998 8888888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC-CHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV-DASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      ..|++||++++.+++.++.|++++||+||+|+||+++|++........ ... .............+. +++++|+|+|+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~  237 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE-ETSKKFYSTMATMKECVPA-GVMGQPQDIAE  237 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHCTT-SSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc-hhhhhhhHHHHHHHhcCCC-cCCCCHHHHHH
Confidence            999999999999999999999999999999999999999865321100 000 000001111222333 78999999999


Q ss_pred             HHHHHhcCCCCc-ccccEEEecCCcccccCCCCCCCccc
Q 022418          259 AALYLASDDAKY-VSGHNLVVDGGFTSFKNLKLPAPVQV  296 (297)
Q Consensus       259 ~~~~l~~~~~~~-~tG~~i~vdgG~~~~~~~~~~~~~~~  296 (297)
                      ++++|+++...+ +||+++.+|||.....++....+.++
T Consensus       238 ~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~  276 (278)
T 1spx_A          238 VIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL  276 (278)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred             HHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence            999999887676 99999999999998877777666654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=7.8e-45  Score=316.63  Aligned_cols=242  Identities=28%  Similarity=0.431  Sum_probs=211.4

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhH-HHHH----HHhCCCeeEEEecCCCHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLG-QQTA----KELGPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~----~~~~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ++++||+++||||+  +|||++++++|+++|++|++++|+.+.. ++..    +..+.++.++.+|++|+++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            57999999999999  9999999999999999999999886543 3333    333678999999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC--CCCc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--LAQH  180 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~--~~~~  180 (297)
                      .++++++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.  ++..
T Consensus        96 ~~~~g~id~li~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           96 VADFGQIDAFIANAGAT--ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHTSCCSEEEECCCCC--CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHcCCCCEEEECCCcC--CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence            99999999999999987  4556788899999999999999999999999999988778999999999988765  4678


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|+++. |+||+|+||+++|++.....         +..........+. +++.+|+|+|+++
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~-~r~~~~~dva~~~  242 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP---------KETQQLWHSMIPM-GRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC---------HHHHHHHHTTSTT-SSCEETHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC---------HHHHHHHHhcCCC-CCCcCHHHHHhHh
Confidence            99999999999999999999887 99999999999999875321         1222223333334 8899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +||+++.+.++||++|.+|||++.
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             heeecCccccccCCEEEECCceec
Confidence            999999999999999999999976

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-45  Score=316.35  Aligned_cols=243  Identities=33%  Similarity=0.490  Sum_probs=214.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++.+.++++++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999999999888887777777889999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++ +++|++||..+..+.++...|++||++++
T Consensus        83 ~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  159 (253)
T 1hxh_A           83 VLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCC--CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHH
Confidence            999999987  455678889999999999999999999999999998777 99999999999999888999999999999


Q ss_pred             HHHHHHHHHHccC--CcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh---cCCCCCCCCCHHHHHHHHHHHhc
Q 022418          191 GLVKSMAAELCEY--GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS---TGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       191 ~~~~~la~el~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      .|++.++.|++++  ||+||+|+||+++|++......   .....    .....   ..+ .+++++|+|+|+++++|++
T Consensus       160 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~----~~~~~~~~~~p-~~~~~~~~dvA~~~~~l~s  231 (253)
T 1hxh_A          160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KGVSK----EMVLHDPKLNR-AGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TTCCH----HHHBCBTTTBT-TCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc---hhhhH----HHHhhhhccCc-cCCCCCHHHHHHHHHHHcC
Confidence            9999999999988  9999999999999998654211   01111    10111   223 3788999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...++||+.+.+|||++.
T Consensus       232 ~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          232 DESSVMSGSELHADNSILG  250 (253)
T ss_dssp             GGGTTCCSCEEEESSSCTT
T ss_pred             ccccCCCCcEEEECCCccc
Confidence            9889999999999999765

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-45  Score=317.66  Aligned_cols=246  Identities=28%  Similarity=0.434  Sum_probs=181.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999998888776665   56788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCC-CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          105 KHNQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      .++++|+||||||.... ....+.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+.   ++...|+
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            99999999999998421 3345677899999999999999999999999999988788999999999876   3456799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|+.++||+|++|+||+++|++.......        ..........+. +++.+|+|+|+++++|
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~dva~~~~~l  230 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK--------EMVDDIVKGLPL-SRMGTPDDLVGMCLFL  230 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH--------HHHHHHhccCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987543211        111111222233 7888999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...++||++|++|||..+.
T Consensus       231 ~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          231 LSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HSGGGTTCCSCEEEC-------
T ss_pred             cCccccCCCCCEEEECCCeecC
Confidence            9999899999999999998764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=4.2e-44  Score=314.84  Aligned_cols=251  Identities=27%  Similarity=0.397  Sum_probs=211.2

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---HhCCCeeEEEecCCCHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAK---ELGPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+. .++..+   ..+.++.++.+|++|+++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            34467899999999999999999999999999999999998754 333333   23567899999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC-Ccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHT  181 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~-~~~  181 (297)
                      .+.++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|  ++.+++|++||..+..+.++ ...
T Consensus       102 ~~~~g~iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~  177 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAV  177 (283)
T ss_dssp             HHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHcCCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcc
Confidence            99999999999999987  45567888999999999999999999999999999  35689999999999887664 789


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC---CCHHHHHHHHHh--cCCCCCCCCCHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG---VDASRLLELVYS--TGVLEGTHCEPNDI  256 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~di  256 (297)
                      |++||++++.|++.++.|++++||+||+|+||+++|++...........   ...+.... ...  ..+. +++++|+|+
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~-~r~~~p~dv  255 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE-YAAVQWSPL-RRVGLPIDI  255 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHH-HHHHHSCTT-CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHH-HHhhcCCCC-CCCcCHHHH
Confidence            9999999999999999999999999999999999999876532211011   01222222 222  3334 889999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      |++++||+++...++||++|.+|||++
T Consensus       256 A~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          256 ARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            999999999988999999999999975

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.3e-45  Score=316.23  Aligned_cols=250  Identities=24%  Similarity=0.363  Sum_probs=210.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988777766554     23788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++ +|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++
T Consensus        83 ~~g-id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LGG-ADILVYSTGGP--RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TTC-CSEEEECCCCC--CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hcC-CCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence            998 99999999976  455678889999999999999999999999999998777899999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc--CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ||++++.+++.++.|++++||+||+|+||+++|++..........  ....+..........+. +++++|+|+|+++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPEELASVVAF  238 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTT-SSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCC-CCccCHHHHHHHHHH
Confidence            999999999999999999999999999999999987522110000  00001001111122333 789999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcc
Q 022418          263 LASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      |+++...++||++|.+|||++
T Consensus       239 l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          239 LASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            999988999999999999975

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.7e-44  Score=311.64  Aligned_cols=250  Identities=22%  Similarity=0.283  Sum_probs=213.5

Q ss_pred             ccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHhCC-CeeEEEecCCCHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQQTA---KELGP-NATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        29 ~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~-~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      +++++||+++||||+  +|||++++++|+++|++|++++|+.+..+...   ++.+. ++.++.+|++|+++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            357899999999999  66999999999999999999999875443332   33333 7899999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          103 ISKHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .++++++|++|||||.....  ...+.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+...
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence            99999999999999987311  355778899999999999999999999999999964  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|++++||+||+|+||+|+|++.....       ..+..........+. +++.+|+|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~p~dva~~v  231 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-------DFNSILKDIEERAPL-RRTTTPEEVGDTA  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-------THHHHHHHHHHHSTT-SSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-------chHHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999875432       112222223333344 8899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccccCC
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++|+++...++||++|.+|||++.....
T Consensus       232 ~~l~s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          232 AFLFSDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             HHHcCCchhcCcCCEEEECCCeEEeeec
Confidence            9999998899999999999999887543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3.2e-44  Score=315.14  Aligned_cols=249  Identities=20%  Similarity=0.251  Sum_probs=212.8

Q ss_pred             CccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQH--QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+.++++|+++||||+  +|||+++|++|+++|++|++++|+.  +.++++.++. .++.++.+|++|+++++++++++.
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF-NPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG-CCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc-CCceEEEeecCCHHHHHHHHHHHH
Confidence            4457999999999998  7799999999999999999999987  4444444443 458899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCC--CCccCC-CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          104 SKHNQLDIMYNNAGVACKT--PRSIVD-LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      ++++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++.++++++|.|.++ .+++|++||..+..+.+.+.
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  177 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYN  177 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTH
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCch
Confidence            9999999999999987321  133444 8899999999999999999999999999765 69999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|++++||+|++|+||+|+|++.....       ..+..........+. +++++|+|+|+++
T Consensus       178 ~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~~~~~pedvA~~v  249 (280)
T 3nrc_A          178 TMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-------NFKKMLDYNAMVSPL-KKNVDIMEVGNTV  249 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-------THHHHHHHHHHHSTT-CSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-------chHHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999876432       112222223333344 8899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++|+++...++||++|.+|||+++..
T Consensus       250 ~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          250 AFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             HHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHhCcccCCcCCcEEEECCCccccC
Confidence            99999988999999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3.4e-44  Score=310.77  Aligned_cols=249  Identities=26%  Similarity=0.414  Sum_probs=209.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+  ++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999999999999999876  3333333   56788899999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+....|+++|+
T Consensus        79 ~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           79 GVDILVNNAGIQ--HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SCSEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence            999999999987  445677889999999999999999999999999998777899999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh-cCCCHHHHHHHH-HhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY-AGVDASRLLELV-YSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.+++.++.|+.++||+||+|+||+++|++......... ............ ....+ .+++++|+|+|+++++|++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~dvA~~~~~l~s  235 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQP-SLAFVTPEHLGELVLFLCS  235 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCT-TCCCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCC-CCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999998754321000 000010000111 22233 3789999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...++||+++.+|||++.
T Consensus       236 ~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          236 EAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             CccCCCCCCEEEECCCccC
Confidence            8888999999999999764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.2e-45  Score=318.35  Aligned_cols=235  Identities=26%  Similarity=0.304  Sum_probs=204.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHH---hCCCeeEEEecCCCHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-------GQQTAKE---LGPNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-------~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~   99 (297)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.       +++..++   .+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            67999999999999999999999999999999999998753       3333333   3678899999999999999999


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--CC
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--GL  177 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--~~  177 (297)
                      +++.+++|++|+||||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.|++|++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAI--WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCC--CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcc--cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            99999999999999999987  556688899999999999999999999999999999888899999999998887  67


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-CccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPF-AIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI  256 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  256 (297)
                      ....|++||++++.|++.++.|++++||+||+|+|| +++|++.....     .             . ...++.+|+|+
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----~-------------~-~~~~~~~pedv  220 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----G-------------V-DAAACRRPEIM  220 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------C-------------C-CGGGSBCTHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----c-------------c-cccccCCHHHH
Confidence            788999999999999999999999999999999999 69998763211     0             0 11456799999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      |++++||+++...++||+.| +|||++...
T Consensus       221 A~~v~~l~s~~~~~itG~~i-~~~g~~~~~  249 (274)
T 3e03_A          221 ADAAHAVLTREAAGFHGQFL-IDDEVLAQA  249 (274)
T ss_dssp             HHHHHHHHTSCCTTCCSCEE-EHHHHHHHT
T ss_pred             HHHHHHHhCccccccCCeEE-EcCcchhhc
Confidence            99999999999999999999 888876543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2e-44  Score=314.58  Aligned_cols=251  Identities=20%  Similarity=0.189  Sum_probs=209.5

Q ss_pred             cCCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++||||  ++|||++++++|+++|++|++++|+.+. +++..++++.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            3588999999999  9999999999999999999999999866 466656566678899999999999999999999999


Q ss_pred             C---CccEEEECccCCCCC---CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          107 N---QLDIMYNNAGVACKT---PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       107 g---~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      |   ++|+||||||.....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|++|++||..+ .+.+.+.
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~  159 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYN  159 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTH
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchH
Confidence            9   999999999986310   356778899999999999999999999999999965  389999999776 6777888


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCH---HHHHHHHHhcCCCCC-CCCCHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA---SRLLELVYSTGVLEG-THCEPNDI  256 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~di  256 (297)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++..........+...   +...+......+. + ++.+|+|+
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~rr~~~p~dv  238 (269)
T 2h7i_A          160 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI-GWNMKDATPV  238 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT-CCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc-ccCCCCHHHH
Confidence            99999999999999999999999999999999999999865432100000000   0111112233444 6 69999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |++++||+++.+.++||++|.+|||++.
T Consensus       239 A~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          239 AKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHhCchhccCcceEEEecCCeee
Confidence            9999999999999999999999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-45  Score=321.82  Aligned_cols=246  Identities=23%  Similarity=0.307  Sum_probs=214.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      +.+++||++|||||++|||+++|++|+++|+   +|++++|+.+.+++..+++     +.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3568999999999999999999999999998   9999999999888777665     4578899999999999999999


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      ++.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+...
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKAL-GSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhcCCCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            99999999999999999863 24567889999999999999999999999999999887889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|++++||+||+|+||+|+|++.......     ..+........     ...++|+|+|+++
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~-----~~p~~pedvA~~v  256 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-----NEEQAKNVYKD-----TTPLMADDVADLI  256 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-----CHHHHHHHHTT-----SCCEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-----cHHHHHHhhcc-----cCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999986432211     11221111111     3345899999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +||+++...+++|+++.+|||....
T Consensus       257 ~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          257 VYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             HHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             HHHhCCCCCeEecceEEeeCCCCCC
Confidence            9999999999999999999998653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-44  Score=312.56  Aligned_cols=252  Identities=22%  Similarity=0.242  Sum_probs=208.8

Q ss_pred             CCccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHhCCCeeEEEecCCCHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQLGQ---QTAKELGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ....++++|++|||||+  +|||++++++|+++|++|++++|+....+   +..++ ...+.++.+|++|++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-FGSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-cCCcEEEECCCCCHHHHHHHHHH
Confidence            34568999999999999  99999999999999999999999854333   22233 34588999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCC--CCccCC-CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC
Q 022418          102 TISKHNQLDIMYNNAGVACKT--PRSIVD-LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA  178 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~  178 (297)
                      +.++++++|+||||||.....  ...+.+ .+.++|++.+++|+.+++.++++++|.|++  .+++|++||..+..+.+.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~  163 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPN  163 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCC
Confidence            999999999999999987321  034555 899999999999999999999999999964  589999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      +..|++||++++.|++.++.|++++||+|++|+||+|+|++......       .+..........+. +++++|+|+|+
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~pedva~  235 (271)
T 3ek2_A          164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS-------FGKILDFVESNSPL-KRNVTIEQVGN  235 (271)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH-------HHHHHHHHHHHSTT-SSCCCHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc-------hHHHHHHHHhcCCc-CCCCCHHHHHH
Confidence            99999999999999999999999999999999999999998754321       11222223333444 88999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccccCCC
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      +++||+++...++||++|.+|||++...++.
T Consensus       236 ~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~  266 (271)
T 3ek2_A          236 AGAFLLSDLASGVTAEVMHVDSGFNAVVGGM  266 (271)
T ss_dssp             HHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred             HHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence            9999999988999999999999999876554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-45  Score=318.89  Aligned_cols=251  Identities=25%  Similarity=0.422  Sum_probs=212.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CC---CeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP---NATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~---~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998887766654   33   688999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCc----cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-CCC
Q 022418          105 KHNQLDIMYNNAGVACKTPRS----IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-LAQ  179 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-~~~  179 (297)
                      +++++|+||||||..  ...+    +.+.+.++|++.+++|+.+++.+++++.|.|.+++ +++|++||..+..+. ++.
T Consensus        83 ~~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAA--IPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHSCCCEEEECCCCC--CCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             hcCCCCEEEECCCCC--CCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc
Confidence            999999999999986  3344    67889999999999999999999999999997655 999999999998887 788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH--HHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM--SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ..|++||++++.|++.++.|++++||+||+|+||+++|++.....  ....  .............. +.+++++|+|+|
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~-p~~~~~~pedvA  236 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQAS--QKFYNFMASHKECI-PIGAAGKPEHIA  236 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHH--HHHHHHHHHCTTTC-TTSSCBCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccc--cchHHHHHHHHcCC-CCCCCCCHHHHH
Confidence            899999999999999999999999999999999999999865421  0000  00001111111122 337899999999


Q ss_pred             HHHHHHhcCC-CCcccccEEEecCCcccccC
Q 022418          258 NAALYLASDD-AKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       258 ~~~~~l~~~~-~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++++||+++. ..++||+++.+|||+++.-+
T Consensus       237 ~~v~~l~s~~~~~~~tG~~i~vdgG~~~~~~  267 (280)
T 1xkq_A          237 NIILFLADRNLSFYILGQSIVADGGTSLVMG  267 (280)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGCBG
T ss_pred             HHHHHhcCcccccCccCCeEEECCCcccccC
Confidence            9999999987 78999999999999887633

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-45  Score=315.67  Aligned_cols=235  Identities=26%  Similarity=0.394  Sum_probs=205.6

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+...      ..++.++.+|++|+++++++++++.+++|
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------DPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            456799999999999999999999999999999999999876432      23688999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc--cCCCCccchhh
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL--GGLAQHTYSVS  185 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~--~~~~~~~Y~~s  185 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..  +.++...|++|
T Consensus        96 ~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  173 (260)
T 3un1_A           96 RIDSLVNNAGVF--LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT  173 (260)
T ss_dssp             CCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence            999999999987  45668889999999999999999999999999999888889999999988764  44556799999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|++++||+||+|+||+++|++......            .......+ .+++++|+|+|++++||  
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~------------~~~~~~~p-~~r~~~~~dva~av~~L--  238 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH------------STLAGLHP-VGRMGEIRDVVDAVLYL--  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH------------HHHHTTST-TSSCBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH------------HHHhccCC-CCCCcCHHHHHHHHHHh--
Confidence            9999999999999999999999999999999998753211            11222233 38899999999999999  


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +...++||++|++|||++..
T Consensus       239 ~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          239 EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHCTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCCcEEEECCCeecc
Confidence            45679999999999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-44  Score=312.66  Aligned_cols=250  Identities=31%  Similarity=0.481  Sum_probs=212.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. .+.++.+|++|+++++++++++.++++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45889999999999999999999999999999999999988877776653 47889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||... ...++.+.+.++|++.+++|+.+++.+++++.|.|+++ .+++|++||..+..+.+....|++||+++
T Consensus        84 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (270)
T 1yde_A           84 DCVVNNAGHHP-PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAV  161 (270)
T ss_dssp             CEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHH
Confidence            99999999863 23567788999999999999999999999999998654 58999999999988888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.|++++||+||+|+||+++|++....... .  ..............+. +++++|+|+|+++.||+++ ..
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~-~--~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~-~~  236 (270)
T 1yde_A          162 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL-M--PDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-AN  236 (270)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT-S--SSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhc-c--cchHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHccc-CC
Confidence            9999999999999999999999999999986543210 0  0111111111122344 8899999999999999998 68


Q ss_pred             cccccEEEecCCcccccC
Q 022418          270 YVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~  287 (297)
                      ++||++|.+|||+++..+
T Consensus       237 ~itG~~i~vdGG~~~~~~  254 (270)
T 1yde_A          237 FCTGIELLVTGGAELGYG  254 (270)
T ss_dssp             TCCSCEEEESTTTTSCC-
T ss_pred             CcCCCEEEECCCeecccC
Confidence            999999999999876543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.8e-44  Score=311.64  Aligned_cols=243  Identities=28%  Similarity=0.346  Sum_probs=195.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.     +..  .+.++.+|++|+++++++++++.++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQY--PFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999998752     111  27888999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||+++
T Consensus        76 d~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  153 (250)
T 2fwm_X           76 DALVNAAGIL--RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAAL  153 (250)
T ss_dssp             CEEEECCCCC--CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcC--CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHH
Confidence            9999999987  45567888999999999999999999999999999877789999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHH---HHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE---LVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +.|++.++.|++++||+||+|+||+++|++........  ......+..   ......+. +++++|+|+|+++++|+++
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~  230 (250)
T 2fwm_X          154 KSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLASD  230 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------------CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHhhhhhcccccCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999865421100  000000000   00001223 7789999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...++||+++.+|||+++
T Consensus       231 ~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          231 LASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             cccCCCCCEEEECCCccc
Confidence            889999999999999864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=9.1e-44  Score=313.44  Aligned_cols=244  Identities=25%  Similarity=0.318  Sum_probs=204.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh----CCCeeEEEecCCC----HHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL----GPNATFIACDVTK----ESDVSDA   98 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~----~~~v~~~~~D~s~----~~~i~~~   98 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++    +.++.++.+|++|    +++++++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence            44578999999999999999999999999999999999998 7766655543    5678999999999    9999999


Q ss_pred             HHHHHHHcCCccEEEECccCCCCCCCcc-----CC-----CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC------Cc
Q 022418           99 VDFTISKHNQLDIMYNNAGVACKTPRSI-----VD-----LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR------SG  162 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g  162 (297)
                      ++++.+.++++|+||||||..  ...++     .+     .+.++|++.+++|+.+++.++++++|.|.+++      .+
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAF--YPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC--CCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHhcCCCCEEEECCCCC--CCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            999999999999999999987  33444     55     78899999999999999999999999998765      68


Q ss_pred             eEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh
Q 022418          163 CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS  242 (297)
Q Consensus       163 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      +||++||..+..+.+++..|++||++++.|++.++.|++++||+||+|+||+++|++ . ..        .+.... ...
T Consensus       175 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~--------~~~~~~-~~~  243 (288)
T 2x9g_A          175 SIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG--------EEEKDK-WRR  243 (288)
T ss_dssp             EEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC--------HHHHHH-HHH
T ss_pred             EEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC--------hHHHHH-HHh
Confidence            999999999999989999999999999999999999999999999999999999998 3 11        111111 122


Q ss_pred             cCCCCCCC-CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          243 TGVLEGTH-CEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       243 ~~~~~~~~-~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ..+. +++ .+|+|+|++++||+++.+.++||+.|.+|||+++.
T Consensus       244 ~~p~-~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          244 KVPL-GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             TCTT-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hCCC-CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            2333 777 89999999999999998899999999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-44  Score=310.48  Aligned_cols=243  Identities=30%  Similarity=0.460  Sum_probs=197.8

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +....++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..++.++.+|+++.+++.+++++    
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT----
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh----
Confidence            3455789999999999999999999999999999999999999999998888888899999999999999887764    


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      .+++|++|||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.+++..|++|
T Consensus        82 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           82 TSNLDILVCNAGIT--SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence            47899999999987  4455677888999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|+.++||+|++|+||+++|++.....        .. .........+. +++.+|+|+|+++++|++
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  229 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN--------EK-QREAIVQKIPL-GTYGIPEDVAYAVAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC--------HH-HHHHHHHHCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC--------HH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999875431        11 12222233334 889999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...++||++|++|||+.+
T Consensus       230 ~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          230 NNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCccCcEEEECCCEee
Confidence            9989999999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.3e-43  Score=311.25  Aligned_cols=244  Identities=26%  Similarity=0.435  Sum_probs=213.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++.+ +++++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~  103 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGR  103 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSE
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCC
Confidence            46899999999999999999999999999999999999999999988888888999999999999999999999 78899


Q ss_pred             ccEEEEC-ccCCCCCCCcc-----CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC------CCCceEEEEecccccccC
Q 022418          109 LDIMYNN-AGVACKTPRSI-----VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP------RRSGCILCTASVTGLLGG  176 (297)
Q Consensus       109 id~li~~-ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~g~iv~vss~~~~~~~  176 (297)
                      +|++||| +|..  ....+     .+.+.++|++.+++|+.+++.++++++|.+.+      ++.|+||++||..+..+.
T Consensus       104 id~lv~~aag~~--~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  181 (281)
T 3ppi_A          104 LRYAVVAHGGFG--VAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ  181 (281)
T ss_dssp             EEEEEECCCCCC--CCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred             CCeEEEccCccc--ccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence            9999999 5544  22222     46789999999999999999999999999976      467899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 022418          177 LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI  256 (297)
Q Consensus       177 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  256 (297)
                      +.+..|++||++++.|++.++.|++++||+|++|+||+|+|++.....        .+. ........+..+++.+|+|+
T Consensus       182 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--------~~~-~~~~~~~~~~~~~~~~pedv  252 (281)
T 3ppi_A          182 IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG--------EEA-LAKFAANIPFPKRLGTPDEF  252 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC--------HHH-HHHHHHTCCSSSSCBCHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc--------HHH-HHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999999999875432        222 22222333333789999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          257 ANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       257 a~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      |+++++|+++  .++||++|.+|||+.+..
T Consensus       253 A~~v~~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          253 ADAAAFLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHHHHHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHcC--CCcCCcEEEECCCcccCC
Confidence            9999999975  689999999999998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.7e-43  Score=306.72  Aligned_cols=247  Identities=28%  Similarity=0.454  Sum_probs=211.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.        +.++.++.+|++|+++++++++++.++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45889999999999999999999999999999999998764        3568899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+++
T Consensus        76 D~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  153 (264)
T 2dtx_A           76 SVLVNNAGIE--SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAV  153 (264)
T ss_dssp             CEEEECCCCC--CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHH
Confidence            9999999987  45567888999999999999999999999999999887789999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHH---HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS---RLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +.|++.++.|+.+. |+||+|+||+++|++......... .....   ..........+. +++++|+|+|+++++|+++
T Consensus       154 ~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~  230 (264)
T 2dtx_A          154 IGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEV-GSDPMRIEKKISEWGHEHPM-QRIGKPQEVASAVAFLASR  230 (264)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHH-CSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhccc-ccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999988 999999999999998754321110 00110   111112222333 7899999999999999999


Q ss_pred             CCCcccccEEEecCCcccccCCC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      ...+++|+.+.+|||++......
T Consensus       231 ~~~~~tG~~i~vdGG~~~~~p~~  253 (264)
T 2dtx_A          231 EASFITGTCLYVDGGLSIRAPIS  253 (264)
T ss_dssp             GGTTCCSCEEEESTTGGGCCCCC
T ss_pred             hhcCCCCcEEEECCCcccCCCCC
Confidence            88999999999999988765443

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.3e-44  Score=312.54  Aligned_cols=235  Identities=23%  Similarity=0.297  Sum_probs=200.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----C-CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----G-PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~-~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     + .++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888776654     2 678899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++++|+||||||..  ....+ +.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.++...|+
T Consensus        83 ~~~g~iD~lvnnAg~~--~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMF--MDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHHCCEEEEEECCCCC--CCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred             HhcCCCCEEEECCCcC--CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence            9999999999999987  44445 77899999999999999999999999999887789999999999998777789999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+||+|+||+++|++......                  ..+.+++++|+|+|++++||
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------------------~~~~~~~~~p~dva~~v~~l  221 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT------------------PFKDEEMIQPDDLLNTIRCL  221 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC------------------CSCGGGSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC------------------CcccccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997654221                  01226688999999999999


Q ss_pred             hcCC-CCcccccEEEecCCcccc
Q 022418          264 ASDD-AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~-~~~~tG~~i~vdgG~~~~  285 (297)
                      +++. ..++++.+|.+|||.-..
T Consensus       222 ~s~~~~~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          222 LNLSENVCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             HTSCTTEECCEEEEEEHHHHHC-
T ss_pred             HcCCCceEeeEEEEEeecccccc
Confidence            9954 567788899999997544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=6.1e-44  Score=310.15  Aligned_cols=239  Identities=35%  Similarity=0.565  Sum_probs=213.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..++.++.+|++|+++++++++++.++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35889999999999999999999999999999999999988887777665568889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||+++
T Consensus        83 D~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  160 (260)
T 1nff_A           83 HVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV  160 (260)
T ss_dssp             CEEEECCCCC--CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHH
Confidence            9999999987  45567788999999999999999999999999999877789999999999999888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.+++.++.|++++||+||+|+||+++|++..  ..       .+.+    . ..+ .+++++|+|+|+++++|+++...
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~-------~~~~----~-~~~-~~~~~~~~dvA~~v~~l~s~~~~  225 (260)
T 1nff_A          161 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WV-------PEDI----F-QTA-LGRAAEPVEVSNLVVYLASDESS  225 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TS-------CTTC----S-CCS-SSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cc-------hhhH----H-hCc-cCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999754  10       0000    0 122 37889999999999999998889


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      +++|+.+.+|||.+..
T Consensus       226 ~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          226 YSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCcCCEEEECCCeecc
Confidence            9999999999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.1e-43  Score=304.60  Aligned_cols=236  Identities=28%  Similarity=0.474  Sum_probs=204.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+..   .++++  +.++.+|+++ ++++++++++.+.++++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999999998763   33343  7888999999 999999999999999999999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC--CCCccchhhHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG--LAQHTYSVSKSAIIG  191 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~--~~~~~Y~~sK~a~~~  191 (297)
                      ||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.  ++...|++||++++.
T Consensus        76 ~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~  153 (239)
T 2ekp_A           76 HAAAVN--VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLG  153 (239)
T ss_dssp             ECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHH
T ss_pred             ECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHH
Confidence            999987  4556788899999999999999999999999999987778999999999998877  788899999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      |++.++.|++++||+||+|+||+++|++......      ..+ .........+. +++.+|+|+|+++++|+++...++
T Consensus       154 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~-~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~  225 (239)
T 2ekp_A          154 LTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ------NPE-LYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYL  225 (239)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT------CHH-HHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc------CHH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCC
Confidence            9999999999999999999999999998754310      111 11122222333 788999999999999999988999


Q ss_pred             cccEEEecCCcccc
Q 022418          272 SGHNLVVDGGFTSF  285 (297)
Q Consensus       272 tG~~i~vdgG~~~~  285 (297)
                      ||+.+.+|||++.+
T Consensus       226 tG~~~~vdgG~~~~  239 (239)
T 2ekp_A          226 TGQAVAVDGGFLAY  239 (239)
T ss_dssp             CSCEEEESTTTTTC
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.2e-43  Score=310.62  Aligned_cols=241  Identities=24%  Similarity=0.287  Sum_probs=202.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh----CCCeeEEEecCCCH----HHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL----GPNATFIACDVTKE----SDVSDAVD  100 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~----~~~v~~~~~D~s~~----~~i~~~~~  100 (297)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++    +.++.++.+|++|+    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            3578999999999999999999999999999999999 887777666554    56789999999999    99999999


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCH-----------HHHHHHHHHhhhHHHHHHHHHHHhccCCCC------ce
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNL-----------EVFDQVMRINVRGVVAGIKHSTRVMIPRRS------GC  163 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------g~  163 (297)
                      ++.++++++|+||||||..  ...++.+.+.           ++|++.+++|+.+++.++++++|.|. ++.      ++
T Consensus        87 ~~~~~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAY--YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCC--CCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             HHHHhcCCCCEEEECCCCC--CCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            9999999999999999987  4455677777           99999999999999999999999997 555      89


Q ss_pred             EEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          164 ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       164 iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ||++||..+..+.+++..|++||++++.|++.++.|++++||+||+|+||+++|+ . . .       ..+. .......
T Consensus       164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~-------~~~~-~~~~~~~  232 (276)
T 1mxh_A          164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A-M-------PQET-QEEYRRK  232 (276)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-S-------CHHH-HHHHHTT
T ss_pred             EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c-C-------CHHH-HHHHHhc
Confidence            9999999999998999999999999999999999999999999999999999998 2 1 1       1111 1112222


Q ss_pred             CCCCCC-CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          244 GVLEGT-HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       244 ~~~~~~-~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+. ++ +++|+|+|+++++|+++...++||++|.+|||+++.
T Consensus       233 ~p~-~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          233 VPL-GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             CTT-TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            334 66 899999999999999988899999999999998754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-44  Score=307.93  Aligned_cols=243  Identities=32%  Similarity=0.517  Sum_probs=204.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++.. ++ .++.++.+|++|+++++++    .++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~----~~~~~~i   75 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-PGIQTRVLDVTKKKQIDQF----ANEVERL   75 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-TTEEEEECCTTCHHHHHHH----HHHCSCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-cCceEEEeeCCCHHHHHHH----HHHhCCC
Confidence            3578999999999999999999999999999999999987766554 33 2688899999999998844    4457899


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~a  188 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+ +...|++||++
T Consensus        76 d~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a  153 (246)
T 2ag5_A           76 DVLFNVAGFV--HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (246)
T ss_dssp             SEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             CEEEECCccC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHH
Confidence            9999999987  45567788999999999999999999999999999877789999999999988877 78899999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.+++.++.|++++||+||+|+||+++|++.......   ....+..........+. +++++|+|+|+++++|+++..
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l~s~~~  229 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA---RGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDES  229 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH---SSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc---ccCcHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999986543211   01112222222222333 788999999999999999988


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .++||++|.+|||++.
T Consensus       230 ~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          230 AYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=8e-44  Score=310.47  Aligned_cols=241  Identities=29%  Similarity=0.443  Sum_probs=208.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++.+|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999665 56666666655544   56889999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccch
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++++|+||||||..  ....+.+.+.++|++.+++|+.+++.+++++++.|. +++.+++|++||..+..+.+++..|+
T Consensus       101 ~~g~id~li~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIA--RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHCCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhCCccEEEECCCCC--CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            999999999999987  456678899999999999999999999999998886 55679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+|++|+||+++|++....         .+. ........+. +++.+|+|+|+++.||
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~-~~~~~~~~p~-~~~~~~edva~~~~~L  247 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---------ESA-LKEAMSMIPM-KRMGQAEEVAGLASYL  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---------HHH-HHHHHHTCTT-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---------HHH-HHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987532         111 1222223334 8899999999999999


Q ss_pred             hcCCCCcccccEEEecCCc
Q 022418          264 ASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~  282 (297)
                      +++...++||++|.+|||+
T Consensus       248 ~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          248 MSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCCcccCccCCEEEeCCCc
Confidence            9999999999999999996

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=318.52  Aligned_cols=242  Identities=21%  Similarity=0.235  Sum_probs=209.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHh----CCCeeEEEecCCCHH------------
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIAD-IQHQLGQQTAKEL----GPNATFIACDVTKES------------   93 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~~~~----~~~v~~~~~D~s~~~------------   93 (297)
                      ++++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++    +.++.++.+|++|++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            48999999999999999999999999999999999 9988777666544    467899999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCC--------------HHHHHHHHHHhhhHHHHHHHHHHH
Q 022418           94 -----DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN--------------LEVFDQVMRINVRGVVAGIKHSTR  154 (297)
Q Consensus        94 -----~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  154 (297)
                           +++++++++.++++++|+||||||+.  ...++.+.+              .++|++.+++|+.+++.++++++|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSF--YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCC--CCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCC--CCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999987  445567777              899999999999999999999999


Q ss_pred             hccCCC------CceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh
Q 022418          155 VMIPRR------SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY  228 (297)
Q Consensus       155 ~l~~~~------~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~  228 (297)
                      .|.+++      .++||++||..+..+.+++..|++||++++.|++.++.|++++||+||+|+||+|+|++ ...     
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-----  274 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-----  274 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-----
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-----
Confidence            997766      79999999999999988999999999999999999999999999999999999999998 321     


Q ss_pred             cCCCHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          229 AGVDASRLLELVYSTGVLEG-THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~-~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                          .+. ........+. + ++++|+|+|++++||+++...++||++|.+|||+.+.+
T Consensus       275 ----~~~-~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  327 (328)
T 2qhx_A          275 ----PAV-WEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  327 (328)
T ss_dssp             ----HHH-HHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             ----HHH-HHHHHhhCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccCc
Confidence                111 1112222334 6 88999999999999999988999999999999987653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.2e-43  Score=308.87  Aligned_cols=265  Identities=45%  Similarity=0.744  Sum_probs=223.1

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..  ++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            344678999999999999999999999999999999999998877776666643  688999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccch
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYS  183 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~  183 (297)
                      +++++|+||||||.......++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.+ +...|+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  168 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  168 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence            9999999999999864333567788999999999999999999999999999877789999999999988877 778999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|++++.+++.++.|++++||++++|+||+++|++......     ...............+.+++++|+|+|+++++|
T Consensus       169 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (278)
T 2bgk_A          169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG-----VDSSRVEELAHQAANLKGTLLRAEDVADAVAYL  243 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS-----CCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc-----cchhHHHHhhhcccccccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998654221     011112222222222337789999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccCCCCCCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKNLKLPAPVQV  296 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~~~~  296 (297)
                      +++...+++|+++.+|||......+.+..+.++
T Consensus       244 ~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          244 AGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             cCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence            998888999999999999988766665555543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=5.4e-44  Score=309.07  Aligned_cols=242  Identities=27%  Similarity=0.358  Sum_probs=209.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.++.+|+++.++++++++.+.+++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999999885 66666666655544   5678899999999999999999988776


Q ss_pred             C------CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          107 N------QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       107 g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      +      ++|++|||||..  ....+.+.+.++|++++++|+.+++.++++++|.|+  +.+++|++||..+..+.+.+.
T Consensus        84 ~~~~~~~~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~  159 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIG--PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFI  159 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTTBH
T ss_pred             cccccCCcccEEEECCCCC--CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCCcc
Confidence            4      499999999987  555678899999999999999999999999999984  358999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|++||++++.|++.++.|+.++||+|++|+||+++|++......       .+..........+. +++.+|+|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~dva~~~  231 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-------DPMMKQYATTISAF-NRLGEVEDIADTA  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-------SHHHHHHHHHTSTT-SSCBCHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-------cHHHHHhhhccCCc-CCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999998765421       12222333333333 8899999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      .||+++...++||++|.+|||+++
T Consensus       232 ~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          232 AFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHHhCcccCCccCCEEEecCCeeC
Confidence            999999999999999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.1e-44  Score=308.89  Aligned_cols=237  Identities=26%  Similarity=0.397  Sum_probs=199.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...++++|+++||||++|||++++++|+++|++|++++|+.+.+++        +..+.+|++|+++++++++++.++++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------LFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------SEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------hcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            3456889999999999999999999999999999999998765432        22488999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.+++|++||..+..+.+....|+.||+
T Consensus        81 ~id~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           81 PVEVLVSNAGLS--ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             SCSEEEEECSCC--C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence            999999999987  455677899999999999999999999999999998777899999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.|++.++.|++++||+||+|+||+++|++....        .. ..........+. +++++|+|+|+.+++|+++.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~-~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~  228 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--------DE-RIQQGALQFIPA-KRVGTPAEVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--------CH-HHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--------CH-HHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999976432        11 111112222333 78899999999999999988


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|++|.+|||+.+
T Consensus       229 ~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             ccCCcCCEEEECCCccc
Confidence            89999999999999764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.7e-43  Score=307.37  Aligned_cols=245  Identities=21%  Similarity=0.265  Sum_probs=207.2

Q ss_pred             cCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.+   ..+++.++.+ .+.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence            46889999999999  99999999999999999999999875   2333333333 478899999999999999999999


Q ss_pred             HcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          105 KHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+.++...|
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  160 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVM  160 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHH
Confidence            999999999999976210  245778899999999999999999999999999864  4899999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.+++.++.|++++||+||+|+||+++|++.....       ..+..........+. +++++|+|+|+++++
T Consensus       161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~  232 (261)
T 2wyu_A          161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-------GFTKMYDRVAQTAPL-RRNITQEEVGNLGLF  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-------ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999864311       011111222223334 789999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      |+++...++||+++.+|||++..
T Consensus       233 l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          233 LLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HcChhhcCCCCCEEEECCCcccc
Confidence            99988899999999999998765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.4e-44  Score=310.17  Aligned_cols=243  Identities=23%  Similarity=0.328  Sum_probs=200.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998888777665   567889999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++||++
T Consensus        82 iD~lVnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            99999999987  5667889999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|+++++.|+ + ||+||+|+||+|+|++..........        ....   ...+..++|+|+|++++||+++..
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~--------~~~~---~~~~~~~~pedvA~~v~~l~s~~~  226 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETM--------AAMD---TYRAIALQPADIARAVRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHH--------HHHH---hhhccCCCHHHHHHHHHHHhcCCc
Confidence            999999999998 4 99999999999999987643221100        0000   011335799999999999999999


Q ss_pred             CcccccEEEecCCcccccCCC
Q 022418          269 KYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      .+.+|+.+..++|.++....+
T Consensus       227 ~~~~~~i~i~p~~~~~~~~~~  247 (264)
T 3tfo_A          227 SVDTTEITIRPTASGNAENLY  247 (264)
T ss_dssp             TEEEEEEEEEECC--------
T ss_pred             cCccceEEEecCccccccCcc
Confidence            999999999999988765544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.3e-44  Score=311.58  Aligned_cols=239  Identities=29%  Similarity=0.460  Sum_probs=198.0

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +....++++|+++||||++|||++++++|+++|++|++++|+.+.++        .+.++.+|++|+++++++++++.++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            33446789999999999999999999999999999999999876543        2778999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|++++.++||++||..+..+.+....|+++
T Consensus        85 ~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (253)
T 2nm0_A           85 HGPVEVLIANAGVT--KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS  162 (253)
T ss_dssp             TCSCSEEEEECSCC--TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence            99999999999987  4555777888999999999999999999999999987678999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|++.++.|+++.||+||+|+||+++|++......        +. ........+. +++++|+|+|+.+++|++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~-~~~~~~~~p~-~~~~~p~dvA~~i~~l~s  232 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--------EQ-RANIVSQVPL-GRYARPEEIAATVRFLAS  232 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------------C-HHHHHTTCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--------HH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998653210        00 1111222333 788999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...++||+++.+|||+++
T Consensus       233 ~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          233 DDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCcCcEEEECCcccc
Confidence            9889999999999999864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-43  Score=304.35  Aligned_cols=234  Identities=26%  Similarity=0.326  Sum_probs=207.8

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecC--CCHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDV--TKESDVSDAV   99 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~--s~~~~i~~~~   99 (297)
                      +..+.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    ...+.++.+|+  ++++++.+++
T Consensus         6 ~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~   85 (247)
T 3i1j_A            6 SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA   85 (247)
T ss_dssp             CCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             CCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence            44556799999999999999999999999999999999999998888776655    25667777777  9999999999


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ  179 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~  179 (297)
                      +++.+.++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+++
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  164 (247)
T 3i1j_A           86 ARVEHEFGRLDGLLHNASIIG-PRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW  164 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCCEEEECCccCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc
Confidence            999999999999999999863 4456788999999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      ..|++||++++.|++.++.|+.+ .||+||+|+||+++|++........                  ...+..+|+|+|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~------------------~~~~~~~p~dva~  226 (247)
T 3i1j_A          165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE------------------NPLNNPAPEDIMP  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS------------------CGGGSCCGGGGTH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc------------------CccCCCCHHHHHH
Confidence            99999999999999999999976 7999999999999999865432110                  0145678999999


Q ss_pred             HHHHHhcCCCCcccccEEEe
Q 022418          259 AALYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~v  278 (297)
                      .++||+++.+.++||++|++
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            99999999999999999986

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.5e-43  Score=307.01  Aligned_cols=244  Identities=22%  Similarity=0.253  Sum_probs=205.4

Q ss_pred             CCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.   +..+++.+..+ ...++.+|++|+++++++++++.++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3889999999999  9999999999999999999999987   22333333323 3478999999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCC-CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVD-LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      ++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++.++++++|.|.+  .|++|++||..+..+.+++..|
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence            99999999999976310  144666 889999999999999999999999999964  4899999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.+++.++.|++++||+||+|+||+++|++.....       ..+..........+. +++++|+|+|+++++
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAF  234 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999864321       011111222222334 788999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      |+++...++||+++.+|||++..
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          235 LCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhcCccCCEEEECCCcCCC
Confidence            99988899999999999998765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.1e-43  Score=305.50  Aligned_cols=239  Identities=27%  Similarity=0.429  Sum_probs=203.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .++|++|||||++|||++++++|++ .|++|++++|+.+..       ...+.++.+|++|+++++++++.+.  ++++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIK--NVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTT--TCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHH--hCCCC
Confidence            4689999999999999999999999 899999999987521       2357889999999999999996553  67999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|+++  +++|++||..+..+.+....|++||++++
T Consensus        73 ~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           73 GIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIA  148 (244)
T ss_dssp             EEEECCCCC--CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccC--CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHH
Confidence            999999987  45668889999999999999999999999999999654  89999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .|++.++.|++++||+||+|+||+++|++.........  .....++.........+. +++++|+|+|++++||+++.+
T Consensus       149 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~~  227 (244)
T 4e4y_A          149 QMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL-NRIAQPQEIAELVIFLLSDKS  227 (244)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999998876543211  111222233333333444 889999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .++||++|.+|||++.
T Consensus       228 ~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          228 KFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             ccccCCeEeECCCccC
Confidence            9999999999999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.6e-43  Score=306.07  Aligned_cols=236  Identities=19%  Similarity=0.206  Sum_probs=194.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            5789999999999999999999999999999999999999888877665   567899999999999999999999999 


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++||
T Consensus        82 g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 APLEVTIFNVGAN--VNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             SCEEEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             CCceEEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence            9999999999987  46678889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEE-EEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          187 SAIIGLVKSMAAELCEYGIRI-NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      ++++.|++.++.|++++||+| |+|+||+|+|++.........         .......+. + +++|+|+|++++||++
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~-~-~~~pedvA~~~~~l~s  228 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF---------GKDALANPD-L-LMPPAAVAGAYWQLYQ  228 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh---------hhhhhcCCc-c-CCCHHHHHHHHHHHHh
Confidence            999999999999999999999 999999999998865432211         111111122 4 8899999999999999


Q ss_pred             CCCCcccccEEEec
Q 022418          266 DDAKYVSGHNLVVD  279 (297)
Q Consensus       266 ~~~~~~tG~~i~vd  279 (297)
                      ++..+.+|++....
T Consensus       229 ~~~~~~~~~i~~~~  242 (252)
T 3h7a_A          229 QPKSAWTFEMEIRP  242 (252)
T ss_dssp             CCGGGBCSEEEEBC
T ss_pred             CchhcceeeEEeee
Confidence            88888888876543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.6e-43  Score=307.11  Aligned_cols=245  Identities=25%  Similarity=0.329  Sum_probs=206.5

Q ss_pred             CCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++||+++||||+  +|||++++++|+++|++|++++|+.+   .++++.++.+ .+.++.+|++|+++++++++++.++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3899999999999  99999999999999999999999875   2233333333 4788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.++++++|.|.++ .++||++||..+..+.+.+..|+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence            99999999999986310  1456788999999999999999999999999999754 58999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.+++.++.|++++||+||+|+||+|+|++.....       .............+. +++++|+|+|+++++|
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~p~-~~~~~~~dva~~~~~l  247 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-------GFHLLMEHTTKVNPF-GKPITIEDVGDTAVFL  247 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-------chHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999864311       011111222223333 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...++||+++.+|||++..
T Consensus       248 ~s~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          248 CSDWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCCcccCCCCCEEEECCCcccc
Confidence            9988899999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=4e-43  Score=307.35  Aligned_cols=244  Identities=21%  Similarity=0.246  Sum_probs=207.3

Q ss_pred             CCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999986   3333333333 4788999999999999999999999


Q ss_pred             cCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+++..|+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhH
Confidence            99999999999986310  245778899999999999999999999999999964  48999999999999988889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+||+|+||+|+|++.....       ..+..........+. +++++|+|+|+++++|
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~l  231 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-------DFRMILKWNEINAPL-RKNVSLEEVGNAGMYL  231 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-------ccHHHHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999865321       111111222223334 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...++||+.+.+|||+...
T Consensus       232 ~s~~~~~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          232 LSSLSSGVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCccccCCCCCEEEECCCcccC
Confidence            9988899999999999998763

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1e-43  Score=309.65  Aligned_cols=249  Identities=21%  Similarity=0.237  Sum_probs=209.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..   ...+.++.+|++|+++++++++++.+.+|++
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4688999999999999999999999999999999999987655432   2468899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++||+++
T Consensus        89 D~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~  166 (266)
T 3p19_A           89 DAIVNNAGMM--LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV  166 (266)
T ss_dssp             EEEEECCCCC--CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHH
Confidence            9999999987  45668889999999999999999999999999999887889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+||+|+||+|+|++......       ............+. +++++|+|+|++++||++.+..
T Consensus       167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~-~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          167 HAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-------QQIKDGYDAWRVDM-GGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-------HHHHHHHHHHHHHT-TCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-------hhhhHHHHhhcccc-cCCCCHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999999998764321       11111111111133 8899999999999999999989


Q ss_pred             cccccEEEecCCcccccCCCCC
Q 022418          270 YVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      +.+++.+....+......+.+|
T Consensus       239 ~~~~~i~i~p~~~~~~~~~~~~  260 (266)
T 3p19_A          239 VCIREIALAPTKQQPKLAAALE  260 (266)
T ss_dssp             EEEEEEEEEETTCCC-------
T ss_pred             ccceeeEEecCCCCCccchhhh
Confidence            9999999888888776666554

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-44  Score=322.50  Aligned_cols=244  Identities=28%  Similarity=0.448  Sum_probs=209.4

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHHHHh---CCCeeEEEecCCCH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ----------HQLGQQTAKEL---GPNATFIACDVTKE   92 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~----------~~~~~~~~~~~---~~~v~~~~~D~s~~   92 (297)
                      +..+.+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++   +.++.++.+|++|+
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            334557999999999999999999999999999999999997          55566555544   56788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC------CceEEE
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR------SGCILC  166 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~  166 (297)
                      ++++++++++.+++|++|+||||||..  ....+.+.+.++|++.+++|+.+++.+++++.|.|.+.+      .|+||+
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIV--RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            999999999999999999999999987  456688999999999999999999999999999986422      479999


Q ss_pred             EecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCC
Q 022418          167 TASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL  246 (297)
Q Consensus       167 vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (297)
                      +||..+..+.+....|++||++++.|++.++.|++++||+||+|+|| ++|++.........    .         ....
T Consensus       177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~----~---------~~~~  242 (322)
T 3qlj_A          177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM----A---------TQDQ  242 (322)
T ss_dssp             ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------
T ss_pred             EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh----h---------cccc
Confidence            99999999999999999999999999999999999999999999999 99998754321110    0         0001


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ..+.++|+|+|++++||+++.+.++||++|.+|||+...
T Consensus       243 ~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          243 DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             -CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             ccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            135679999999999999999999999999999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=8.5e-43  Score=303.07  Aligned_cols=246  Identities=30%  Similarity=0.464  Sum_probs=208.9

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..|++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            34678999999999999999999999999999999999999888888887777899999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccC------CCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEeccccccc
Q 022418          108 QLDIMYNNAGVACKTPRSIV------DLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLG  175 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vss~~~~~~  175 (297)
                      ++|+||||||...  ...+.      +.+.++|++.+++|+.+++.+++++.|.|+++      +.+++|++||..+..+
T Consensus        86 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           86 RVDVAVNCAGIAV--ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             CCCEEEECCCCCC--CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCEEEECCccCC--CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence            9999999999863  33233      37899999999999999999999999999876      6789999999999888


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND  255 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  255 (297)
                      .++...|+.+|++++.+++.++.|+.++||+|++|+||+++|++......         ..........+..+++++|+|
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d  234 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---------KVCNFLASQVPFPSRLGDPAE  234 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHTCSSSCSCBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---------HHHHHHHHcCCCcCCCCCHHH
Confidence            88899999999999999999999999999999999999999998653211         011111122222277899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +|+.+++|++  ..+++|+++.+|||+++..
T Consensus       235 va~~~~~l~~--~~~~~G~~i~vdgG~~~~~  263 (265)
T 2o23_A          235 YAHLVQAIIE--NPFLNGEVIRLDGAIRMQP  263 (265)
T ss_dssp             HHHHHHHHHH--CTTCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHhh--cCccCceEEEECCCEecCC
Confidence            9999999995  4689999999999988754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.7e-43  Score=308.02  Aligned_cols=241  Identities=25%  Similarity=0.309  Sum_probs=194.1

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+++|+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999999999999999988888888999999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEecccccccCCCCccchhhH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.++...|++||
T Consensus       103 iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  181 (272)
T 4dyv_A          103 VDVLFNNAGTGA-PAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK  181 (272)
T ss_dssp             CCEEEECCCCCC-CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence            999999999863 335688899999999999999999999999999998665  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|+++++.|++++||+||+|+||+|+|++.........     .     .....+. +++++|+|+|++++||++.
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~-----~~~~~~~-~~~~~pedvA~~v~fL~s~  250 (272)
T 4dyv_A          182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP-----Q-----ADLSIKV-EPVMDVAHVASAVVYMASL  250 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch-----h-----hhhcccc-cCCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999998765432110     0     0011122 6788999999999999997


Q ss_pred             CCCcccccEEEecCC
Q 022418          267 DAKYVSGHNLVVDGG  281 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG  281 (297)
                      +.....++......+
T Consensus       251 ~~~~~~~~i~i~~~~  265 (272)
T 4dyv_A          251 PLDANVQFMTIMATK  265 (272)
T ss_dssp             CTTSCCCEEEEEEC-
T ss_pred             CCcCccceEEEeccC
Confidence            655444444444333

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.3e-42  Score=299.42  Aligned_cols=241  Identities=32%  Similarity=0.509  Sum_probs=210.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988877776655    4568899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCc---cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          110 DIMYNNAGVACKTPRS---IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       110 d~li~~ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |+||||||..  ....   +.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|+.+|
T Consensus        82 d~li~~Ag~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGIT--GNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCC--CCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCC--CCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            9999999986  3333   6778899999999999999999999999999877779999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.+++.++.|+.++||+|++|+||+++|++......      . +..........+. +++++|+|+|+++++|+++
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  231 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD------Q-PELRDQVLARIPQ-KEIGTAAQVADAVMFLAGE  231 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT------S-HHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC------C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999998754221      1 1111112222333 7889999999999999999


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...+++|+++.+|||++.
T Consensus       232 ~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          232 DATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             TCTTCCSCEEEESTTGGG
T ss_pred             hhhcccCCEEEECCceec
Confidence            889999999999999864

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=9e-43  Score=301.08  Aligned_cols=246  Identities=31%  Similarity=0.466  Sum_probs=213.3

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCe-eEEEecCCCHHHHHHHHHHHHHHc
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNA-TFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v-~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+++++..++++.++ .++.+|++|+++++++++++.+ +
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~   83 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-V   83 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-h
Confidence            3467899999999999999999999999999999999999988887777766667 8899999999999999999988 8


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC--ccchh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ--HTYSV  184 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~~  184 (297)
                      +++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.+++++.+++|++||..+..+.+..  ..|+.
T Consensus        84 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  161 (254)
T 2wsb_A           84 APVSILVNSAGIA--RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMA  161 (254)
T ss_dssp             SCCCEEEECCCCC--CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHH
T ss_pred             CCCcEEEECCccC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHH
Confidence            9999999999987  4455778899999999999999999999999999987778999999999988877776  89999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++.++||++++|+||+++|++......      ..+.. .......+. +++++|+|+|+++++|+
T Consensus       162 sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~-~~~~~~~~~-~~~~~~~dva~~~~~l~  233 (254)
T 2wsb_A          162 SKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE------RPELF-ETWLDMTPM-GRCGEPSEIAAAALFLA  233 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT------CHHHH-HHHHHTSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc------ChHHH-HHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998754321      11111 112222333 78899999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+++.+|||+..
T Consensus       234 ~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          234 SPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCCEEEECCCEec
Confidence            98888999999999999763

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.3e-42  Score=301.41  Aligned_cols=246  Identities=33%  Similarity=0.496  Sum_probs=213.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++.+|++|++++.++++++.++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999 766666555443   567889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.+.+++ .+++|++||..+..+.++...|+.
T Consensus        83 ~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           83 FGKLDVMINNAGLE--NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            99999999999987  455677889999999999999999999999999998766 789999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||++++.+++.++.++.++||+|++|+||+++|++......      ..+.. .......+. +++++|+|+|+++++|+
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~-~~~~~~~~~-~~~~~~~dva~~~~~l~  232 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA------DPEQR-ADVESMIPM-GYIGEPEEIAAVAAWLA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH------SHHHH-HHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc------ChhHH-HHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998764321      11111 112222333 77899999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++...+++|+++.+|||+++.
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          233 SSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CccccCCCCcEEEEcCCcccC
Confidence            988889999999999998765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=9e-43  Score=303.03  Aligned_cols=238  Identities=25%  Similarity=0.335  Sum_probs=203.4

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ...++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++++
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            33456799999999999999999999999999999999999998887776655   567899999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .+.++++|+||||||... ..+++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.++...|
T Consensus       101 ~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGW-FGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY  179 (262)
T ss_dssp             HHHHSCCSEEEECCCCCC-CSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHH
T ss_pred             HHhcCCCCEEEECCCccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchH
Confidence            999999999999999842 4456788999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      ++||++++.|++.++.|+++.||+|++|+||+++|++.......                 . +..++++|+|+|++++|
T Consensus       180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------------~-~~~~~~~p~dvA~~v~~  241 (262)
T 3rkr_A          180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK-----------------K-SALGAIEPDDIADVVAL  241 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc-----------------c-ccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999986543211                 0 12567899999999999


Q ss_pred             HhcCCCCcccccEEEecCCc
Q 022418          263 LASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~  282 (297)
                      |+++...+++|+.+..+.|.
T Consensus       242 l~s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          242 LATQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             HHTCCTTCCEEEEEEECCCC
T ss_pred             HhcCccccccCcEEeccccC
Confidence            99999999999999887763

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.5e-43  Score=305.98  Aligned_cols=241  Identities=27%  Similarity=0.390  Sum_probs=199.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++|+++||||++|||++++++|+++|++|+++ .|+.+.+++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999999877 67777666655544   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC---CCceEEEEecccccccCC-CCccch
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR---RSGCILCTASVTGLLGGL-AQHTYS  183 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~vss~~~~~~~~-~~~~Y~  183 (297)
                      ++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|.+.   +.++||++||..+..+.+ .+..|+
T Consensus       104 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          104 RLDGLVNNAGIVD-YPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             CCCEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCEEEECCCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            9999999999873 33567889999999999999999999999999999762   468999999999988766 567899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||++++.|++.++.|++++||+|++|+||+|+|++......       .+ .........+. +++.+|+|+|+++++|
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~-~~~~~~~~~~~-~~~~~~edvA~~i~~l  253 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL-------PD-RAREMAPSVPM-QRAGMPEEVADAILYL  253 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CCTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC-------hH-HHHHHhhcCCc-CCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998654211       11 11112222333 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCc
Q 022418          264 ASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~  282 (297)
                      +++...++||++|++|||+
T Consensus       254 ~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          254 LSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCCccccccCCEEeecCCC
Confidence            9999899999999999995

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.8e-43  Score=315.08  Aligned_cols=234  Identities=27%  Similarity=0.291  Sum_probs=206.3

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHH---HHhCCCeeEEEecCCCHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-------GQQTA---KELGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-------~~~~~---~~~~~~v~~~~~D~s~~~~i~~   97 (297)
                      ...+++||++|||||++|||++++++|+++|++|++++|+.+.       +++..   +..+.++.++.+|++|++++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            4467999999999999999999999999999999999999874       23333   3336788999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--  175 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--  175 (297)
                      +++++.++++++|+||||||..  ....+.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+  
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAI--SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            9999999999999999999987  556788899999999999999999999999999999888899999999998877  


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCC-ccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFA-IPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      .+.+..|++||++++.|++.++.|++ .||+||+|+||+ ++|++.+.....                  .+.+++.+|+
T Consensus       197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~------------------~~~~r~~~pe  257 (346)
T 3kvo_A          197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGP------------------GIESQCRKVD  257 (346)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--------------------CGGGCBCTH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccc------------------cccccCCCHH
Confidence            67788999999999999999999999 899999999995 999876432110                  0126788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      |+|+++++|+++ ..++||+.+ +|||+..
T Consensus       258 dvA~~v~~L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          258 IIADAAYSIFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             HHHHHHHHHHTS-CTTCCSCEE-EHHHHHH
T ss_pred             HHHHHHHHHHhc-CCCCCceEE-ECCcEeh
Confidence            999999999999 899999998 9999653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.2e-42  Score=298.63  Aligned_cols=247  Identities=28%  Similarity=0.455  Sum_probs=212.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999988776655544   567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC--ccch
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ--HTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~  183 (297)
                      ++++|+||||||... ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.+..  ..|+
T Consensus        88 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 EGRVDILVACAGICI-SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             HSCCCEEEECCCCCC-CSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            999999999999763 1455778899999999999999999999999999977677999999999988777666  8999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|++++.+++.++.++.++||+|++|+||+++|++......      ....... .....+. +++++|+|+|+++.+|
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~-~~~~~~~-~~~~~~~dva~~~~~l  238 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME------KPELYDA-WIAGTPM-GRVGQPDEVASVVQFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT------CHHHHHH-HHHTCTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC------ChHHHHH-HHhcCCc-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998762211      1111111 2222333 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++...+++|+.+++|||+..
T Consensus       239 ~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          239 ASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCchhccCCCcEEEECCceec
Confidence            998888999999999999763

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=9.8e-43  Score=302.18  Aligned_cols=243  Identities=17%  Similarity=0.191  Sum_probs=205.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFIS---NGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~---~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++++|+++||||++|||++++++|++   +|++|++++|+.+.+++..+++     +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            468899999999999999999999999   8999999999998877776655     45688999999999999999999


Q ss_pred             HHH--HcCCcc--EEEECccCCCCCCCccCC-CCHHHHHHHHHHhhhHHHHHHHHHHHhccCC--CCceEEEEecccccc
Q 022418          102 TIS--KHNQLD--IMYNNAGVACKTPRSIVD-LNLEVFDQVMRINVRGVVAGIKHSTRVMIPR--RSGCILCTASVTGLL  174 (297)
Q Consensus       102 ~~~--~~g~id--~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~vss~~~~~  174 (297)
                      +.+  .++++|  +||||||.......++.+ .+.++|++++++|+.+++.++++++|.|+++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  678899  999999986322245666 6899999999999999999999999999876  579999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      +.++...|++||++++.|++.++.|+.+  |+||+|+||+++|++........    ..+..........+. +++++|+
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~p~-~~~~~p~  234 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETS----KDPELRSKLQKLKSD-GALVDCG  234 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHC----SCHHHHHHHHHHHHT-TCSBCHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhcc----CChhHHHHHHHhhhc-CCcCCHH
Confidence            9999999999999999999999999964  99999999999999876543210    011111222222233 7889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecC
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                      |+|+.+++|+++ ..++||++|.+||
T Consensus       235 dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          235 TSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHHHhh-ccccCCcEEeccC
Confidence            999999999986 5899999999986

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.9e-42  Score=298.59  Aligned_cols=244  Identities=32%  Similarity=0.508  Sum_probs=212.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++.+.++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999999888777766664  5788999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC-ceEEEEecccccccCCCCccchhhH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|++++. +++|++||..+..+.++...|+.||
T Consensus        82 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           82 PVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            999999999987  4556778899999999999999999999999999987766 8999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ++++.+++.++.|+.  +.||++++|+||+++|++.....        ............ +.+++++|+|+|+++.+|+
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~  230 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP--------GAEEAMSQRTKT-PMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST--------THHHHHTSTTTC-TTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC--------chhhhHHHhhcC-CCCCCcCHHHHHHHHHHHc
Confidence            999999999999988  88999999999999999765321        111111111122 3377899999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++...+++|+++.+|||++.
T Consensus       231 ~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          231 SNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCcEEEECCCccC
Confidence            98888999999999999863

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=7.9e-43  Score=303.68  Aligned_cols=247  Identities=25%  Similarity=0.393  Sum_probs=192.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999988777665554   55788999999999999999999999


Q ss_pred             Hc-CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          105 KH-NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      .+ +++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|++++.+++|++||..+..+.++...|+
T Consensus        88 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  165 (266)
T 1xq1_A           88 MFGGKLDILINNLGAI--RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  165 (266)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HhCCCCcEEEECCCCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHH
Confidence            98 8999999999986  45567788999999999999999999999999999877779999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|++++.+++.++.++.+.||+|++|+||+++|++.......        ..........+. +++++|+|+|+++.+|
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~dva~~~~~l  236 (266)
T 1xq1_A          166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD--------EFKKVVISRKPL-GRFGEPEEVSSLVAFL  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH--------HHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999986543211        001111111223 6789999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++...+++|+++.+|||++..
T Consensus       237 ~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          237 CMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             TSGGGTTCCSCEEECCCCEEET
T ss_pred             cCccccCccCcEEEEcCCcccc
Confidence            9988889999999999998754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=8.7e-43  Score=298.47  Aligned_cols=225  Identities=21%  Similarity=0.224  Sum_probs=193.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++++|+|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            57999999999999999999999999999999999999888887776678999999999999999999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++ +++|++||..+..+.+....|++||++++.|
T Consensus        82 vnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  158 (235)
T 3l6e_A           82 LHCAGTG--EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGF  158 (235)
T ss_dssp             EEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred             EECCCCC--CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence            9999986  556688899999999999999999999999999997765 5999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-CCCCcc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS-DDAKYV  271 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~-~~~~~~  271 (297)
                      ++.++.|++++||+||+|+||+++|++......                  . ..+++++|+|+|+.++++++ +...++
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------------~-~~~~~~~pedvA~~v~~l~~~~~~~~i  219 (235)
T 3l6e_A          159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------------V-DPSGFMTPEDAAAYMLDALEARSSCHV  219 (235)
T ss_dssp             HHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHHTCCCSSEEE
T ss_pred             HHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------------C-CCcCCCCHHHHHHHHHHHHhCCCCcce
Confidence            999999999999999999999999998654211                  0 11578899999999999998 567788


Q ss_pred             cccEEEec
Q 022418          272 SGHNLVVD  279 (297)
Q Consensus       272 tG~~i~vd  279 (297)
                      +|-.+.-.
T Consensus       220 ~~i~~~~~  227 (235)
T 3l6e_A          220 TDLFIGRN  227 (235)
T ss_dssp             EEEEEEEC
T ss_pred             eeEEEecC
Confidence            77666543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.5e-43  Score=317.78  Aligned_cols=250  Identities=16%  Similarity=0.220  Sum_probs=205.1

Q ss_pred             CCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHh------CCCeeEEEecCCCH--H
Q 022418           33 EEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQH---------QLGQQTAKEL------GPNATFIACDVTKE--S   93 (297)
Q Consensus        33 ~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~---------~~~~~~~~~~------~~~v~~~~~D~s~~--~   93 (297)
                      ++|+++||||++  |||+++|++|+++|++|++++|+.         ++++......      ...+..+.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999777665         2222221111      12367888999888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh
Q 022418           94 ------------------DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV  155 (297)
Q Consensus        94 ------------------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  155 (297)
                                        +++++++++.++++++|+||||||+......++.+.+.++|++++++|+.+++.++++++|.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975334567889999999999999999999999999999


Q ss_pred             ccCCCCceEEEEecccccccCCCCc-cchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhh-----
Q 022418          156 MIPRRSGCILCTASVTGLLGGLAQH-TYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIY-----  228 (297)
Q Consensus       156 l~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~-----  228 (297)
                      |+++  |+||++||..+..+.+.+. .|++||++++.|+++++.|+++ +||+||+|+||+|+|+|.........     
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  238 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence            9764  8999999999999998886 9999999999999999999998 89999999999999998865421000     


Q ss_pred             ------------------cCCCH-------------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEE
Q 022418          229 ------------------AGVDA-------------SRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLV  277 (297)
Q Consensus       229 ------------------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~  277 (297)
                                        .+...             +..........+. +++.+|+|+|++++||+++.+.++||++|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc-cCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                              00000             0112223344455 899999999999999999999999999999


Q ss_pred             ecCCcccc
Q 022418          278 VDGGFTSF  285 (297)
Q Consensus       278 vdgG~~~~  285 (297)
                      +|||++++
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999985

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-42  Score=303.22  Aligned_cols=243  Identities=29%  Similarity=0.472  Sum_probs=209.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999988777666554   567889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.++...|+++
T Consensus       119 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  196 (285)
T 2c07_A          119 HKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  196 (285)
T ss_dssp             CSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence            99999999999987  4556778899999999999999999999999999987677999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.|+.+.||+|++|+||+++|++.....        . ..........+. +++++|+|+|+++++|++
T Consensus       197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~-~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~  266 (285)
T 2c07_A          197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS--------E-QIKKNIISNIPA-GRMGTPEEVANLACFLSS  266 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC--------H-HHHHHHHTTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC--------H-HHHHHHHhhCCC-CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999764321        1 111112222333 778999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +...+++|+.+.+|||+.
T Consensus       267 ~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          267 DKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             GGGTTCCSCEEEESTTSC
T ss_pred             CCcCCCCCCEEEeCCCcc
Confidence            888899999999999975

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.1e-42  Score=299.43  Aligned_cols=234  Identities=20%  Similarity=0.210  Sum_probs=201.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-e--CCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIA-D--IQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~--r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+++||||++|||++++++|+++|++|+++ +  |+.+.+++..+++ ..     +|+.|+++++++++++.++++++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-----TIALAEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-----EEECCCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-----CcccCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999 6  9988888777665 11     244477888999999999999999


Q ss_pred             EEEECccCCCCCC---CccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          111 IMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       111 ~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +||||||..  ..   .++.+.+.++|++++++|+.+++.++++++|.|++++.+++|++||..+..+.+.+..|++||+
T Consensus        75 ~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (244)
T 1zmo_A           75 TIVSNDYIP--RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARA  152 (244)
T ss_dssp             EEEECCCCC--TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHH
T ss_pred             EEEECCCcC--CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHH
Confidence            999999987  44   5678899999999999999999999999999998777899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcch---hhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +++.|+++++.|++++||+||+|+||+++|++.   .....       .+..........+. +++.+|+|+|+++++|+
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~p~-~r~~~pe~vA~~v~~l~  224 (244)
T 1zmo_A          153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-------NPELRERVDRDVPL-GRLGRPDEMGALITFLA  224 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-------CHHHHHHHHHHCTT-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-------hHHHHHHHhcCCCC-CCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999987   43221       01111111112334 78999999999999999


Q ss_pred             cCCCCcccccEEEecCCcc
Q 022418          265 SDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++...++||++|.+|||++
T Consensus       225 s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          225 SRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TTTTGGGTTCEEEESTTCC
T ss_pred             CccccCccCCEEEeCCCCC
Confidence            9999999999999999964

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.4e-42  Score=298.65  Aligned_cols=242  Identities=30%  Similarity=0.491  Sum_probs=189.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++++|+++||||++|||++++++|+++|++|+++ .|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999998 67776666555443   567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ....+.+.+.++|++.+++|+.+++.+++++.|.|++++.+++|++||..+..+.++...|+.+
T Consensus        81 ~~~~d~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  158 (247)
T 2hq1_A           81 FGRIDILVNNAGIT--RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAAS  158 (247)
T ss_dssp             HSCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHH
Confidence            99999999999986  4445667888999999999999999999999999987677999999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.|+.+.||++++++||+++|++....        .. ..........+. +++++|+|+|+++.++++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~-~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  228 (247)
T 2hq1_A          159 KAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--------PD-KVKEMYLNNIPL-KRFGTPEEVANVVGFLAS  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--------CH-HHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--------ch-HHHHHHHhhCCC-CCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999875431        11 111112222333 788999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +...+++|+++++|||+.
T Consensus       229 ~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          229 DDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTC-
T ss_pred             cccccccCcEEEeCCCcc
Confidence            887889999999999975

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=7e-42  Score=294.94  Aligned_cols=235  Identities=25%  Similarity=0.335  Sum_probs=202.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999988877766554   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ |++|++||..+..+.+....|++||+
T Consensus        84 ~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCC--CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            999999999987  456688899999999999999999999999999997666 99999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH--CEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dia~~~~~l~~  265 (297)
                      +++.|++.++.|++++||+||+|+||+++|++.....       . +........ . + +++  ++|+|+|+.++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~-~~~~~~~~~-~-~-~~~~~~~pedvA~~v~~l~s  229 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-------H-TATKEMYEQ-R-I-SQIRKLQAQDIAEAVRYAVT  229 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-------C-HHHHHHHHH-H-T-TTSCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-------c-hhhHHHHHh-c-c-cccCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865321       0 111111111 1 1 344  899999999999999


Q ss_pred             CCCCcccccEEEecC
Q 022418          266 DDAKYVSGHNLVVDG  280 (297)
Q Consensus       266 ~~~~~~tG~~i~vdg  280 (297)
                      +...+.+++. .+++
T Consensus       230 ~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          230 APHHATVHEI-FIRP  243 (247)
T ss_dssp             SCTTEEEEEE-EEEE
T ss_pred             CCccCccceE-EecC
Confidence            9888887764 4443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=7.8e-42  Score=295.26  Aligned_cols=246  Identities=34%  Similarity=0.477  Sum_probs=212.7

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999988776665544   56788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||...  ..++ +.+.++|++.+++|+.+++.+++++.|.|++++.+++|++||..+..+.++...|+.
T Consensus        85 ~~~~~d~vi~~Ag~~~--~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGG--PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HHSSCCEEEECCCCCC--CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCC--CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            9999999999999873  3334 678999999999999999999999999998777799999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.+++.++.++.+.||++++|+||+++|++.....       ... .........+. +++++|+|+|+++++++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~~~-~~~~~~~~~~~-~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-------TPE-IEQKMLQHTPI-RRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-------CHH-HHHHHHHTCSS-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-------ChH-HHHHHHhcCCc-ccCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998764321       111 11122222333 78899999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++...+++|+++++|||....
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCCC
T ss_pred             CCccccCCCcEEEECCceecc
Confidence            988788999999999998754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-42  Score=297.94  Aligned_cols=245  Identities=25%  Similarity=0.358  Sum_probs=208.6

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----hCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE----LGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+..++..++    .+.++.++.+|++|+++++++++++.
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999977655443333    36678999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCC----
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLA----  178 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~----  178 (297)
                      +.++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.+.+++ .+++|++||..+..+.+.    
T Consensus        88 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           88 ADLGPISGLIANAGVS--VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             HHSCSEEEEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HhcCCCCEEEECCCcC--CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            9999999999999987  455677889999999999999999999999999987654 489999999888765432    


Q ss_pred             ---CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 022418          179 ---QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND  255 (297)
Q Consensus       179 ---~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  255 (297)
                         ...|+.||++++.+++.++.|+.++||+|++|+||+++|++.....        .. .........+. +++++|+|
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~-~~~~~~~~~~~-~~~~~~~d  235 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD--------KK-IRDHQASNIPL-NRFAQPEE  235 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--------HH-HHHHHHHTCTT-SSCBCGGG
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc--------hh-HHHHHHhcCcc-cCCCCHHH
Confidence               6789999999999999999999999999999999999999875421        11 11112222333 77899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +|+++++|+++...+++|+++.+|||++.
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          236 MTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            99999999998888999999999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=6.8e-42  Score=294.42  Aligned_cols=242  Identities=30%  Similarity=0.490  Sum_probs=210.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999999988776655443    567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.++...|+.+
T Consensus        83 ~~~~d~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           83 VDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             SSCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            99999999999987  4455778899999999999999999999999999987777999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.+++.++.++.+.||++++++||+++|++....        .. ..........+. +++++|+|+|+++.++++
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--------~~-~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  230 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--------SE-EIKQKYKEQIPL-GRFGSPEEVANVVLFLCS  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--------CH-HHHHHHHHTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--------cH-HHHHHHHhcCCC-CCccCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999986532        11 111112222233 778999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +...+++|+++.+|||+.
T Consensus       231 ~~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          231 ELASYITGEVIHVNGGMF  248 (248)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             chhhcCCCcEEEeCCCcC
Confidence            877899999999999963

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-42  Score=304.46  Aligned_cols=240  Identities=23%  Similarity=0.310  Sum_probs=194.2

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ...+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +..+.++.+|++|+++++++++++.
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999998887776655    3345889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEecccccccCCCCcc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.+++..
T Consensus       107 ~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  185 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNV-PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP  185 (281)
T ss_dssp             HHHSCCSEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChh
Confidence            99999999999999863 335688899999999999999999999999999998764  689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|++++||+||+|+||+|+|++...........          ....+ .+++++|+|+|++++
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----------~~~~~-~~~~~~pedvA~~v~  254 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA----------NGEVA-AEPTIPIEHIAEAVV  254 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT----------TSCEE-ECCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh----------hhccc-ccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999876543211000          01112 267889999999999


Q ss_pred             HHhcCCC-CcccccEEEec
Q 022418          262 YLASDDA-KYVSGHNLVVD  279 (297)
Q Consensus       262 ~l~~~~~-~~~tG~~i~vd  279 (297)
                      ||++.+. ..+++.++.-.
T Consensus       255 fL~s~~~~~~i~~~~i~p~  273 (281)
T 4dry_A          255 YMASLPLSANVLTMTVMAT  273 (281)
T ss_dssp             HHHHSCTTEEEEEEEEEET
T ss_pred             HHhCCCccCccccEEEEec
Confidence            9999654 34444444433

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=6.3e-42  Score=303.31  Aligned_cols=257  Identities=24%  Similarity=0.301  Sum_probs=216.1

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++.+.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988777665554    6678999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      +.++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.+. +++.+++|++||..+..+.++...|
T Consensus       100 ~~~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  177 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGN--FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  177 (302)
T ss_dssp             HHTCSCSEEEECCCCC--CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchh
Confidence            9999999999999976  455677889999999999999999999999999996 4556899999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCc-chhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP-FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      ++||++++.+++.++.++.++||+|++|+||+++|+ +......       ............+. +++++|+|+|++++
T Consensus       178 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~p~-~~~~~~~dva~~~~  249 (302)
T 1w6u_A          178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-------TGTFEKEMIGRIPC-GRLGTVEELANLAA  249 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-------TSHHHHHHHTTCTT-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc-------chhhHHHHHhcCCc-CCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999998 3322100       01111112222333 78899999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccCCCCCCCc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPV  294 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~~  294 (297)
                      +|+++...+++|+++++|||......+.+....
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~  282 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVLISGEFNDLR  282 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGG
T ss_pred             HHcCCcccccCCCEEEECCCeeeccCCccccch
Confidence            999988889999999999999877655554433

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-42  Score=299.26  Aligned_cols=247  Identities=27%  Similarity=0.486  Sum_probs=206.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-------CCeeEEEecCCCHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-------PNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-------~~v~~~~~D~s~~~~i~~~~   99 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +       .++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            3578999999999999999999999999999999999988877766554   2       46889999999999999999


Q ss_pred             HHHHHHcCCc-cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCC
Q 022418          100 DFTISKHNQL-DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGL  177 (297)
Q Consensus       100 ~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~  177 (297)
                      +.+.+.++++ |+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.+.+++ .+++|++||..+..+.+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGIT--QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHhCCCCeEEEECCCcC--CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            9999999998 9999999987  445677889999999999999999999999999997655 68999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      +...|+.||++++.+++.++.++.++||++++|+||+++|++.......         .........+. +++++|+|+|
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~dva  230 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK---------VVDKITEMIPM-GHLGDPEDVA  230 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGGCTT-CSCBCHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH---------HHHHHHHhCCC-CCCCCHHHHH
Confidence            8999999999999999999999999999999999999999986532111         00111112223 7788999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +++++++++...+++|+.+.+|||+.+..+.
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            9999999988889999999999999876543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.7e-42  Score=300.89  Aligned_cols=245  Identities=25%  Similarity=0.399  Sum_probs=208.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|+++++++++++.+
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999987665554433   56789999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccC-CCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--CCCCcc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIV-DLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--GLAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--~~~~~~  181 (297)
                      .++++|+||||||... ...++. +.+.++|++.+++|+.+++.+++.++|.+++++.+++|++||..+..+  .++...
T Consensus       108 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTW-TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             HHSCCSEEEECGGGST-TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             HhCCCCEEEECCcccc-cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            9999999999999873 214455 778999999999999999999999999998777899999999998877  777889


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.+|++++.+++.++.|+.++| +|++|+||+++|++....        ..+. ........+. +++++|+|+|++++
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--------~~~~-~~~~~~~~p~-~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--------SKDM-KAKWWQLTPL-GREGLTQELVGGYL  255 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--------CHHH-HHHHHHHSTT-CSCBCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--------ChHH-HHHHHHhCCc-cCCcCHHHHHHHHH
Confidence            99999999999999999999999 999999999999986321        1111 1112222333 78999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +|+++...+++|+++.+|||+++
T Consensus       256 ~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCccccCccCCEEEECCCeec
Confidence            99998888999999999999864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6e-42  Score=294.22  Aligned_cols=238  Identities=29%  Similarity=0.511  Sum_probs=206.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ||+++||||++|||++++++|+++|++|+++ +|+.+..++..+++   +.++.++.+|++|+++++++++++.++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999984 78877766655443   5678899999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.++...|+.+|+++
T Consensus        81 d~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            9999999987  45567788999999999999999999999999999876789999999999988888889999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-cCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA-SDDA  268 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~-~~~~  268 (297)
                      +.+++.++.++.+.||++++|+||+++|++.....        .. .........+. +++++|+|+|+++.+|+ ++..
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~-~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  228 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG--------ED-MEKKILGTIPL-GRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--------HH-HHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC--------hH-HHHHHhhcCCC-CCCCCHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999999999999765321        11 11122222333 78899999999999999 6677


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                      .+++|+++++|||+.
T Consensus       229 ~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          229 SYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGCCSCEEEESTTTT
T ss_pred             CCcCCCEEEeCCCcc
Confidence            899999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=9.8e-42  Score=292.98  Aligned_cols=241  Identities=27%  Similarity=0.367  Sum_probs=206.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++. .+.++.+|++|+++++++++    ++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----~~~~   76 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALG----SVGP   76 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHH----HcCC
Confidence            367899999999999999999999999999999999999888777766553 46677999999999988876    5688


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|++|||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .+++|++||..+..+.++...|+.||+
T Consensus        77 id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  154 (244)
T 3d3w_A           77 VDLLVNNAAVA--LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKG  154 (244)
T ss_dssp             CCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEECCccC--CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHH
Confidence            99999999986  445577889999999999999999999999999997655 689999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+++.++.|++++||+|++|+||+++|++......      ....... .....+. +++++|+|+|+++++++++.
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~------~~~~~~~-~~~~~~~-~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS------DPHKAKT-MLNRIPL-GKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC------STTHHHH-HHHTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc------ChHHHHH-HHhhCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999998653211      0111111 1222333 78999999999999999987


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      ..+++|+++.+|||++.
T Consensus       227 ~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          227 SGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCEEEECCCccC
Confidence            78899999999999764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=3.7e-42  Score=292.17  Aligned_cols=221  Identities=24%  Similarity=0.265  Sum_probs=189.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+                 +|++|+++++++++++    +++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~----g~i   60 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------LDISDEKSVYHYFETI----GAF   60 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------CCTTCHHHHHHHHHHH----CSE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------cCCCCHHHHHHHHHHh----CCC
Confidence            5789999999999999999999999999999999999865                 8999999999988754    899


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||... ...++.+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+.++...|+++|+++
T Consensus        61 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~  137 (223)
T 3uce_A           61 DHLIVTAGSYA-PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAI  137 (223)
T ss_dssp             EEEEECCCCCC-CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHH
Confidence            99999999863 3456788999999999999999999999999999965  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|+++  |+||+|+||+++|++........     .+..........+. +++.+|+|+|+++++|++  ..
T Consensus       138 ~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~--~~  207 (223)
T 3uce_A          138 EATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADD-----RDAMYQRTQSHLPV-GKVGEASDIAMAYLFAIQ--NS  207 (223)
T ss_dssp             HHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHH-----HHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHH--CT
T ss_pred             HHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhh-----HHHHHHHHhhcCCC-CCccCHHHHHHHHHHHcc--CC
Confidence            9999999999987  99999999999999876432211     11112222233344 889999999999999997  47


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      ++||++|.+|||+.+
T Consensus       208 ~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          208 YMTGTVIDVDGGALL  222 (223)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCcEEEecCCeec
Confidence            899999999999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.5e-42  Score=301.87  Aligned_cols=249  Identities=22%  Similarity=0.302  Sum_probs=199.9

Q ss_pred             cCCCCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHH
Q 022418           23 RGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        23 ~~~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ++......+++ |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++
T Consensus        11 ~~~~~~~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   89 (272)
T 2nwq_A           11 SGLVPRGSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVD   89 (272)
T ss_dssp             ----------C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccccCCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            33444445667 999999999999999999999999999999999988888777664  368899999999999999999


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc-eEEEEecccccccCCCC
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQ  179 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~vss~~~~~~~~~~  179 (297)
                      ++.++++++|+||||||... ...++.+.+.++|++++++|+.+++.++++++|.|++++.| +||++||..+..+.+..
T Consensus        90 ~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~  168 (272)
T 2nwq_A           90 NLPEEFATLRGLINNAGLAL-GTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS  168 (272)
T ss_dssp             TCCGGGSSCCEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCEEEECCCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC
Confidence            99999999999999999863 23567889999999999999999999999999999877778 99999999999988888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ..|+++|++++.|++.++.|++++||+||+|+||+++|++........     .+...... .    ....++|+|+|+.
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~-~----~~~~~~pedvA~~  238 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD-----QARYDKTY-A----GAHPIQPEDIAET  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccc-----hHHHHHhh-c----cCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999864321100     00000000 0    1235799999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++||+++. .+++|+.|.+|+|...
T Consensus       239 v~~l~s~~-~~~~g~~i~v~~~~~~  262 (272)
T 2nwq_A          239 IFWIMNQP-AHLNINSLEIMPVSQS  262 (272)
T ss_dssp             HHHHHTSC-TTEEEEEEEEEETTEE
T ss_pred             HHHHhCCC-ccCccceEEEeeccCc
Confidence            99999875 7899999999998644

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.1e-41  Score=317.32  Aligned_cols=242  Identities=27%  Similarity=0.369  Sum_probs=206.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ--LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..+++|+++||||++|||++++++|+++|++|++++|+..  .+++..++.  .+.++.||++|+++++++++++.++++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999999753  334444444  356899999999999999999999997


Q ss_pred             C-ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          108 Q-LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       108 ~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      + +|+||||||+.  ....+.+.+.++|++.+++|+.+++++.+++.|.|.+++.++||++||..+..+.+++..|+++|
T Consensus       287 ~~id~lV~nAGv~--~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          287 GKVDILVNNAGIT--RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCceEEEECCccc--CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            6 99999999988  56678899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|+++++.|+.++||+||+|+||+++|+|.......         ..+......+. ++..+|+|+|+++.||+++
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~l-~r~g~pedvA~~v~fL~s~  434 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA---------TREVGRRLNSL-FQGGQPVDVAELIAYFASP  434 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------------CHHHHHSBTT-SSCBCHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh---------hHHHHHhhccc-cCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999987643211         01111122233 7788999999999999999


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      ...++||++|.+|||..+.
T Consensus       435 ~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          435 ASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             GGTTCCSCEEEESSSBSCC
T ss_pred             ccCCCCCcEEEECCccccc
Confidence            9999999999999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1e-41  Score=294.14  Aligned_cols=237  Identities=20%  Similarity=0.282  Sum_probs=198.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.++++++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            68999999999999999999999999999999998888888777778899999999999999999999888999999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.++...|++||++++.|++
T Consensus        81 nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  159 (248)
T 3asu_A           81 NAGLAL-GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_dssp             CCCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHH
Confidence            999762 2345778899999999999999999999999999987777999999999999998889999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          195 SMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      .++.|++++||+||+|+||+++ |++........     .+......     .....++|+|+|+.++||+++. .+++|
T Consensus       160 ~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-----~~~~~~~~-----~~~~~~~p~dvA~~v~~l~s~~-~~~~g  228 (248)
T 3asu_A          160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-----DGKAEKTY-----QNTVALTPEDVSEAVWWVSTLP-AHVNI  228 (248)
T ss_dssp             HHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHHHHHHHSC-TTCCC
T ss_pred             HHHHHhhhcCcEEEEEeccccccCcchhhcccCc-----hHHHHHHH-----hccCCCCHHHHHHHHHHHhcCC-cccee
Confidence            9999999999999999999999 99754221100     00000000     0123469999999999999975 78999


Q ss_pred             cEEEecCCcc
Q 022418          274 HNLVVDGGFT  283 (297)
Q Consensus       274 ~~i~vdgG~~  283 (297)
                      +.+.++++..
T Consensus       229 ~~i~v~~~~~  238 (248)
T 3asu_A          229 NTLEMMPVTQ  238 (248)
T ss_dssp             CEEEECCTTC
T ss_pred             eEEEEccccc
Confidence            9999998743

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.1e-41  Score=291.20  Aligned_cols=228  Identities=24%  Similarity=0.248  Sum_probs=201.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.++.+|++|+++++++++++.+++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999999999998877766544    678999999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|. ++.+++|+++|..+..+.+....|+++|++
T Consensus        81 id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLG--YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCC--CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccc--cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            99999999987  566788899999999999999999999999999994 456899999999999998888999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|++.++.  ...||+||+|+||+++|++.......     .             ...++++|+|+|++++||+++..
T Consensus       158 ~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~-----~-------------~~~~~~~p~dva~~v~~l~~~~~  217 (235)
T 3l77_A          158 ARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGK-----P-------------KEKGYLKPDEIAEAVRCLLKLPK  217 (235)
T ss_dssp             HHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCC-----C-------------GGGTCBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCc-----c-------------cccCCCCHHHHHHHHHHHHcCCC
Confidence            9999999944  46799999999999999987543210     0             01357899999999999999999


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                      .+.+|+.+..|+|..
T Consensus       218 ~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          218 DVRVEELMLRSVYQR  232 (235)
T ss_dssp             TCCCCEEEECCTTSC
T ss_pred             CCccceEEEeecccC
Confidence            999999999999964

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.2e-41  Score=294.73  Aligned_cols=236  Identities=20%  Similarity=0.251  Sum_probs=199.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK--ELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+  ..+.++..+     |+++++++++++.++++++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999999887665543  224455443     6678889999999999999999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+....|++||++++.|
T Consensus        77 v~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (254)
T 1zmt_A           77 VSNDIFAP-EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  155 (254)
T ss_dssp             EEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence            99999762 23457788999999999999999999999999999877789999999999999988899999999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCc---------cCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          193 VKSMAAELCEYGIRINCISPFAI---------PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++.++.|++++||+||+|+||++         +|++...         ..+. ........+. +++++|+|+|+.+++|
T Consensus       156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---------~~~~-~~~~~~~~p~-~~~~~p~dvA~~v~~l  224 (254)
T 1zmt_A          156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---------NPEH-VAHVKKVTAL-QRLGTQKELGELVAFL  224 (254)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---------CHHH-HHHHHHHSSS-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---------ChHH-HHHHhccCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999         6655432         1111 1112222333 7889999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccC
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +++...++||+++.+|||+.....
T Consensus       225 ~s~~~~~~tG~~~~vdgG~~~~~~  248 (254)
T 1zmt_A          225 ASGSCDYLTGQVFWLAGGFPMIER  248 (254)
T ss_dssp             HTTSCGGGTTCEEEESTTCCCCCC
T ss_pred             hCcccCCccCCEEEECCCchhhcc
Confidence            999989999999999999887543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.7e-42  Score=296.14  Aligned_cols=244  Identities=22%  Similarity=0.271  Sum_probs=196.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH-c
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK-H  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~-~  106 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++ +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999988777666554   567889999999999999999999886 8


Q ss_pred             CCccEEEECccCCC-----CCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          107 NQLDIMYNNAGVAC-----KTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       107 g~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +++|+||||||...     ....++.+.+.++|++.+++|+.+++.+++++.|.|.+++.|++|++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            99999999995311     02345677888999999999999999999999999987778999999999887654 4679


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.|++++||+||+|+||+++|++..........  ...   ........+.++..+|+|+|++++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~pe~va~~v~  235 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEV--LQD---PVLKQFKSAFSSAETTELSGKCVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccc--cch---hHHHHHHhhhccCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999987543211000  000   000000011245578999999999


Q ss_pred             HHhcCCC-CcccccEEEecC
Q 022418          262 YLASDDA-KYVSGHNLVVDG  280 (297)
Q Consensus       262 ~l~~~~~-~~~tG~~i~vdg  280 (297)
                      ||+++.. .++||++|.+|+
T Consensus       236 ~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          236 ALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHTCTTGGGGTTCEEEHHH
T ss_pred             HHhcCcccccccceeechhh
Confidence            9999886 489999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-41  Score=291.37  Aligned_cols=250  Identities=27%  Similarity=0.410  Sum_probs=211.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            446799999999999999999999999999999999999 666666555443   5678899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTY  182 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y  182 (297)
                      ++++++|++|||||..  ....+.+.+.++|++.+++|+.+++.+++++++.++ ++ +++|++||..+. .+.+....|
T Consensus        95 ~~~~~~d~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGME--VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHSCEEEEECCCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHcCCCCEEEECCCCC--CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchH
Confidence            9999999999999987  455677889999999999999999999999999997 33 899999999988 677888899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc----CCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA----GVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      +.+|++++.+++.++.++...||++++++||+++|++.........+    ....+..........+. +++++|+|+|+
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~  249 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCC-CCccCHHHHHH
Confidence            99999999999999999999999999999999999987643322111    11212222222233333 78999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ++++|+++...+++|+++++|||+
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCcccccccCcEEEecCCc
Confidence            999999988788999999999996

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-41  Score=287.39  Aligned_cols=240  Identities=28%  Similarity=0.370  Sum_probs=205.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++. ..+.++.+|++|+++++++++    .++++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----~~~~i   77 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALG----GIGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHH----HcCCC
Confidence            4688999999999999999999999999999999999988877766654 346677999999999988877    56789


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.+.+++ .+++|++||..+..+.++...|+.||++
T Consensus        78 d~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  155 (244)
T 1cyd_A           78 DLLVNNAALV--IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA  155 (244)
T ss_dssp             SEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CEEEECCccc--CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHH
Confidence            9999999987  445677889999999999999999999999999997665 6899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.+++.++.++.+.||++++|+||+++|++......      .. ..........+. +++++|+|+|+++++++++..
T Consensus       156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~-~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1cyd_A          156 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA------DP-EFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC------CH-HHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc------CH-HHHHHHHhcCCc-cCCCCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999987653210      11 111112222333 789999999999999999888


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .+++|+.+.+|||+..
T Consensus       228 ~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          228 ASTSGGGILVDAGYLA  243 (244)
T ss_dssp             TTCCSSEEEESTTGGG
T ss_pred             hcccCCEEEECCCccC
Confidence            8999999999999764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-41  Score=298.12  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=210.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--------CCCeeEEEecCCCHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--------GPNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------~~~v~~~~~D~s~~~~i~~~~   99 (297)
                      .+.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++        +.++.++.+|++|++++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            345789999999999999999999999999999999999988777665553        457899999999999999999


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ  179 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~  179 (297)
                      +.+.+.++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.+.+++.+++|++||.. ..+.+..
T Consensus        92 ~~~~~~~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~  168 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQ--FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA  168 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc
Confidence            99999999999999999976  44567788999999999999999999999999966554568999999988 7777888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ..|+++|++++.+++.++.++.+.||+|++|+||+++|++.........    .. .........+. +++++|+|+|++
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~-~~~~~~~~~p~-~~~~~~~dvA~~  242 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG----QS-FFEGSFQKIPA-KRIGVPEEVSSV  242 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG----GG-GGTTGGGGSTT-SSCBCTHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccc----hH-HHHHHHhcCcc-cCCCCHHHHHHH
Confidence            8999999999999999999999999999999999999995321111000    00 00001112233 778999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccccc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +++|+++...+++|+++.+|||.....
T Consensus       243 i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          243 VCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHhCcccccCCCcEEEECCCeeccc
Confidence            999999888899999999999988763

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.5e-41  Score=292.43  Aligned_cols=242  Identities=28%  Similarity=0.413  Sum_probs=207.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-HQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~-~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++||||++|||++++++|+++|++|++++|+ .+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999 77776665544   5678999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--C---ceEEEEecccccc-cCCCCc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--S---GCILCTASVTGLL-GGLAQH  180 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---g~iv~vss~~~~~-~~~~~~  180 (297)
                      +++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++  .   +++|++||..+.. +.++..
T Consensus        84 g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           84 GGIDVLINNAGGLV-GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             SSCSEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             CCCCEEEECCCCcC-CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence            99999999999732 445677889999999999999999999999999986543  3   8999999998887 778888


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|+.||++++.+++.++.++.++||+|++|+||+++|++....        ... .........+. +++++|+|+|+++
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~~-~~~~~~~~~~~-~~~~~~~dva~~~  232 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--------TQD-VRDRISNGIPM-GRFGTAEEMAPAF  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--------CHH-HHHHHHTTCTT-CSCBCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--------CHH-HHHHHhccCCC-CcCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999986532        111 11112222233 7889999999999


Q ss_pred             HHHhcCCCC-cccccEEEecCCcc
Q 022418          261 LYLASDDAK-YVSGHNLVVDGGFT  283 (297)
Q Consensus       261 ~~l~~~~~~-~~tG~~i~vdgG~~  283 (297)
                      .+++++... +++|+++++|||..
T Consensus       233 ~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          233 LFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHhCcchhccccCCEEeECCCcc
Confidence            999987666 89999999999975

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.1e-41  Score=298.47  Aligned_cols=253  Identities=20%  Similarity=0.254  Sum_probs=200.3

Q ss_pred             ccCCCCCEEEEEcCC--CcHHHHHHHHHHHCCCeEEEEeCCch-----------hHHHHHHHhCC----C-eeEEEec--
Q 022418           29 SRKLEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQHQ-----------LGQQTAKELGP----N-ATFIACD--   88 (297)
Q Consensus        29 ~~~~~~k~vlVtGas--~giG~~ia~~l~~~G~~Vi~~~r~~~-----------~~~~~~~~~~~----~-v~~~~~D--   88 (297)
                      .+++++|+++||||+  +|||++++++|+++|++|++++|+.+           ++++. +++..    . ...+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            367899999999999  99999999999999999999987632           11111 11110    0 2333443  


Q ss_pred             ------CC------------CHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHH
Q 022418           89 ------VT------------KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK  150 (297)
Q Consensus        89 ------~s------------~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  150 (297)
                            ++            ++++++++++++.++++++|+||||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  32            267899999999999999999999999753234567889999999999999999999999


Q ss_pred             HHHHhccCCCCceEEEEecccccccCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhh
Q 022418          151 HSTRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIY  228 (297)
Q Consensus       151 ~~~~~l~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~  228 (297)
                      +++|.|++  .|++|++||..+..+.+.+ ..|++||++++.|++.++.|+++ +||+||+|+||+++|++......   
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~---  236 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---  236 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH---
T ss_pred             HHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc---
Confidence            99999965  4899999999999888877 69999999999999999999985 89999999999999998653100   


Q ss_pred             cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCCCC
Q 022418          229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAP  293 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~  293 (297)
                          .+..........+. +++.+|+|+|+.++||+++...++||++|.+|||++.. +..++.|
T Consensus       237 ----~~~~~~~~~~~~p~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~-~~~~~~~  295 (297)
T 1d7o_A          237 ----IDTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM-GVALDSP  295 (297)
T ss_dssp             ----HHHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC-SSCTTCT
T ss_pred             ----cHHHHHHhhccCCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee-cCCCCCC
Confidence                01111112222334 78899999999999999998899999999999998875 3444443

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-41  Score=290.25  Aligned_cols=236  Identities=25%  Similarity=0.381  Sum_probs=196.9

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ....++++|+++||||++|||++++++|+++|++|++++|+.+..+    +++ .+.++ +|+  .++++++++++    
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~-~~~~~-~D~--~~~~~~~~~~~----   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSG-HRYVV-CDL--RKDLDLLFEKV----   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTC-SEEEE-CCT--TTCHHHHHHHS----
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hhC-CeEEE-eeH--HHHHHHHHHHh----
Confidence            4456899999999999999999999999999999999999874332    333 56677 999  55677776654    


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      .++|+||||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|+++|
T Consensus        80 ~~iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (249)
T 1o5i_A           80 KEVDILVLNAGGP--KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSAR  157 (249)
T ss_dssp             CCCSEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHH
Confidence            3899999999976  45567888999999999999999999999999999877789999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++.|+.++||+||+|+||+++|++.....        ............+. +++++|+|+|+++++|+++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l~s~  228 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--------SEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSE  228 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--------CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--------hhhHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999865321        11111012222333 7889999999999999998


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      ...+++|+++.+|||++..
T Consensus       229 ~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          229 KASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             GGTTCCSCEEEESTTCCCC
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            8899999999999997653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.8e-41  Score=296.20  Aligned_cols=236  Identities=24%  Similarity=0.385  Sum_probs=196.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            3589999999999999999999999999999999999999888776665   5678999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +++|+||||||..  ..+++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus       107 g~id~lvnnAg~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  184 (301)
T 3tjr_A          107 GGVDVVFSNAGIV--VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA  184 (301)
T ss_dssp             SSCSEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCcC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence            9999999999987  556688899999999999999999999999999997765 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|+++++.|++++||+|++|+||+|+|++.........................+.....++|+|+|+.++.++.
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999988754322111111000011111111222567899999999999987


Q ss_pred             CC
Q 022418          266 DD  267 (297)
Q Consensus       266 ~~  267 (297)
                      .+
T Consensus       265 ~~  266 (301)
T 3tjr_A          265 AN  266 (301)
T ss_dssp             HT
T ss_pred             cC
Confidence            65

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9.4e-41  Score=286.77  Aligned_cols=238  Identities=28%  Similarity=0.460  Sum_probs=206.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh---CCCeeE-EEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL---GPNATF-IACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~---~~~v~~-~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++   +.++.. +.+|++|+++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999998 88887776665543   456666 899999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|++|||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+.+|++
T Consensus        81 ~d~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGIT--RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            99999999987  4455778899999999999999999999999999987777999999999988888888999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.+++.++.++.+.||++++|+||+++|++....        ... .........+. +++++|+|+|+++.+++++..
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~~-~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  228 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--------PQE-VKEAYLKQIPA-GRFGRPEEVAEAVAFLVSEKA  228 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--------CHH-HHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--------CHH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999976431        111 11112222233 788999999999999999877


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                      .+++|+++.+|||..
T Consensus       229 ~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          229 GYITGQTLCVDGGLT  243 (245)
T ss_dssp             TTCCSCEEEESTTCS
T ss_pred             ccccCCEEEECCCCC
Confidence            899999999999964

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=7e-41  Score=298.67  Aligned_cols=251  Identities=19%  Similarity=0.231  Sum_probs=198.4

Q ss_pred             cCCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCch-----------hHHHHHHHh--CC---CeeEEEec---
Q 022418           30 RKLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQHQ-----------LGQQTAKEL--GP---NATFIACD---   88 (297)
Q Consensus        30 ~~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~~-----------~~~~~~~~~--~~---~v~~~~~D---   88 (297)
                      ++++||+++||||  ++|||++++++|+++|++|++++|+..           .+++. +++  +.   ...++.+|   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccc
Confidence            5689999999999  899999999999999999999998641           12222 222  11   12344444   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHH
Q 022418           89 ---------VT--------KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH  151 (297)
Q Consensus        89 ---------~s--------~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  151 (297)
                               ++        |+++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.+++.++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     33        3668999999999999999999999997632245678899999999999999999999999


Q ss_pred             HHHhccCCCCceEEEEecccccccCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHHHHhhc
Q 022418          152 STRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEMSQIYA  229 (297)
Q Consensus       152 ~~~~l~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~  229 (297)
                      ++|.|++  .|+||++||..+..+.+.+ ..|++||++++.|+++++.|+++ +||+||+|+||+|+|++........ .
T Consensus       164 ~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~-~  240 (315)
T 2o2s_A          164 FGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG-E  240 (315)
T ss_dssp             HSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS-S
T ss_pred             HHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc-c
Confidence            9999965  3899999999998888777 58999999999999999999985 8999999999999999865321000 0


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          230 GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ....+..........+. +++++|+|+|+.++||+++.+.++||++|.+|||++..
T Consensus       241 ~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPL-RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             SCHHHHHHHHHHHHSSS-CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             chhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            00001111112223344 88999999999999999998999999999999998764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=7e-41  Score=293.80  Aligned_cols=248  Identities=20%  Similarity=0.225  Sum_probs=204.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++.+.++.++.+|++|+++++++++++.++++++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999999999999999998888887889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|++||+++
T Consensus        81 d~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (281)
T 3m1a_A           81 DVLVNNAGRT--QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL  158 (281)
T ss_dssp             SEEEECCCCE--EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcC--CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHH
Confidence            9999999987  45567889999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH---hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ---IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +.+++.++.|++++||+|++|+||+++|++.......   ....+..............+.+++++|+|+|++++++++.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  238 (281)
T 3m1a_A          159 EQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDT  238 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999986432110   0111111111111111122337789999999999999987


Q ss_pred             CCCcccccEEEecCCc
Q 022418          267 DAKYVSGHNLVVDGGF  282 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~  282 (297)
                      +.   .|..+.+.++.
T Consensus       239 ~~---~~~~~~l~s~~  251 (281)
T 3m1a_A          239 EK---TPLRLALGGDA  251 (281)
T ss_dssp             SS---CCSEEEESHHH
T ss_pred             CC---CCeEEecCchH
Confidence            63   45666665544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=8.9e-41  Score=284.90  Aligned_cols=224  Identities=17%  Similarity=0.179  Sum_probs=189.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++++++++++++++.+   ..|++||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS---IPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS---CCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh---cCCEEEE
Confidence            6899999999999999999999999999999999999988888878899999999999999999887643   3499999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ +++|++||..+..+.+....|++||++++.|++
T Consensus        79 ~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           79 SAGSG--YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCC--CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             eCCcC--CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHH
Confidence            99987  566788899999999999999999999999999997765 499999999999999999999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-CCCCcccc
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS-DDAKYVSG  273 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~-~~~~~~tG  273 (297)
                      .++.|++++||+||+|+||+++|++.......                  .+.+++.+|+|+|+.++++++ +...++||
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~~~~~~~dvA~~i~~l~~~~~~~~itg  217 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMATEFWETSGKS------------------LDTSSFMSAEDAALMIHGALANIGNGYVSD  217 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEETTEEEEE
T ss_pred             HHHHHHHhcCeEEEEEECCcccChHHHhcCCC------------------CCcccCCCHHHHHHHHHHHHhCcCCCCccc
Confidence            99999999999999999999999987543211                  012778999999999999987 67899999


Q ss_pred             cEEEecCCc
Q 022418          274 HNLVVDGGF  282 (297)
Q Consensus       274 ~~i~vdgG~  282 (297)
                      +.+..|...
T Consensus       218 ~~~~~~~~~  226 (230)
T 3guy_A          218 ITVNREGHH  226 (230)
T ss_dssp             EEEEC----
T ss_pred             eeecCCCCC
Confidence            999988754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-40  Score=284.05  Aligned_cols=232  Identities=25%  Similarity=0.276  Sum_probs=207.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-------KVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ++|+++||||++|||++++++|+++|+       +|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999988877766655   557889999999999999999999


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY  182 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y  182 (297)
                      .+.++++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+++|++||..+..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcC--CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            99999999999999987  4556778899999999999999999999999999977677999999999999988889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.||++++.+++.++.++.++||+|++|+||+++|++.....       ...            ..++++|+|+|+++++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~------------~~~~~~~~dva~~~~~  219 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-------DEM------------QALMMMPEDIAAPVVQ  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-------STT------------GGGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-------ccc------------cccCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999864321       000            0357899999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++++...+++|+++..|+|....
T Consensus       220 l~~~~~~~~~g~~~~~~~~~~~~  242 (244)
T 2bd0_A          220 AYLQPSRTVVEEIILRPTSGDIQ  242 (244)
T ss_dssp             HHTSCTTEEEEEEEEEETTCCC-
T ss_pred             HHhCCccccchheEEeccccccC
Confidence            99999999999999999997763

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=6.4e-41  Score=299.44  Aligned_cols=252  Identities=19%  Similarity=0.216  Sum_probs=169.9

Q ss_pred             cCCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCc-----------hhHHH-----------HHHHh---CC--
Q 022418           30 RKLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQH-----------QLGQQ-----------TAKEL---GP--   80 (297)
Q Consensus        30 ~~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~-----------~~~~~-----------~~~~~---~~--   80 (297)
                      +++++|++|||||  ++|||++++++|+++|++|++++|+.           +.+++           ..+++   +.  
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            5689999999999  89999999999999999999998753           12211           11111   10  


Q ss_pred             -CeeEEEec------------CCC--------HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHH
Q 022418           81 -NATFIACD------------VTK--------ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR  139 (297)
Q Consensus        81 -~v~~~~~D------------~s~--------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~  139 (297)
                       ...++.+|            ++|        +++++++++++.++++++|+||||||.......++.+.+.++|++.++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence             12344433            333        458999999999999999999999997532245678899999999999


Q ss_pred             HhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccC
Q 022418          140 INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ-HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPT  217 (297)
Q Consensus       140 ~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t  217 (297)
                      +|+.+++.++++++|+|++  .|+||++||..+..+.+.+ ..|++||++++.|+++++.|+++ +||+||+|+||+|+|
T Consensus       165 vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  242 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS  242 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred             HhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence            9999999999999999965  3899999999998888777 68999999999999999999985 899999999999999


Q ss_pred             cchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          218 PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++............. +..........+. +++++|+|+|++++||+++.+.++||++|.+|||++..
T Consensus       243 ~~~~~~~~~~~~~~~-~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          243 RAASAIGKAGDKTFI-DLAIDYSEANAPL-QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             --------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             hhhhhcccccchhhH-HHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            986543210000000 0000111112233 78899999999999999998899999999999998765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.8e-39  Score=277.32  Aligned_cols=229  Identities=27%  Similarity=0.329  Sum_probs=192.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +..+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. ++.++.+|++|+++++++++.+.+.++++|
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3467899999999999999999999999999999999888877776654 688899999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+.+|++++
T Consensus        81 ~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           81 ALVNNAGVG--VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL  158 (234)
T ss_dssp             EEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence            999999986  455677889999999999999999999999999998877899999999999988888899999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .+++.++.++.++||++++|+||+++|++.....         ..+           . .++|+|+|++++++++++..+
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~-----------~-~~~~~dvA~~~~~l~~~~~~~  217 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---------GQA-----------W-KLKPEDVAQAVLFALEMPGHA  217 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---------ccc-----------C-CCCHHHHHHHHHHHhCCCccc
Confidence            9999999999999999999999999998754210         000           1 368999999999999999899


Q ss_pred             ccccEEEecCCcc
Q 022418          271 VSGHNLVVDGGFT  283 (297)
Q Consensus       271 ~tG~~i~vdgG~~  283 (297)
                      ++|+.+..++...
T Consensus       218 ~~g~~~~~~~~~~  230 (234)
T 2ehd_A          218 MVSEIELRPTRPT  230 (234)
T ss_dssp             CCCEEECCC----
T ss_pred             ccceEEEeecCCC
Confidence            9999887766543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.2e-41  Score=321.33  Aligned_cols=230  Identities=27%  Similarity=0.440  Sum_probs=198.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHh---CCCeeEEEecCCCHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH---------QLGQQTAKEL---GPNATFIACDVTKESDVSD   97 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~---------~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~   97 (297)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.         +.+++..+++   +.+   ..+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---~~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---AVADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---EEEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---EEEEcCCHHHHHH
Confidence            468999999999999999999999999999999998765         5555555444   322   2468998888999


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL  177 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~  177 (297)
                      +++++.+++|++|+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGIL--RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            9999999999999999999987  45668899999999999999999999999999999887789999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      .+..|++||+|+.+|+++++.|++++||+||+|+|| ++|+|.....       . +..           ....+|+|+|
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~-------~-~~~-----------~~~~~pe~vA  218 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM-------P-PPM-----------LEKLGPEKVA  218 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS-------C-HHH-----------HTTCSHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC-------C-hhh-----------hccCCHHHHH
Confidence            999999999999999999999999999999999998 6888754211       1 110           1235899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.+.||+++. .++||++|.+|||+...
T Consensus       219 ~~v~~L~s~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          219 PLVLYLSSAE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             HHHHHHTSSS-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHHhCCc-ccCCCCEEEECCCeEEE
Confidence            9999999998 99999999999997543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.5e-40  Score=317.97  Aligned_cols=231  Identities=30%  Similarity=0.475  Sum_probs=196.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++||+++||||++|||+++|++|+++|++|++.+|.. +...+...+.+.++..+.+|++  ++.+++++++.+++|+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSC
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999998632 3332333334556777788884  4567788889899999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.+..|++||++
T Consensus       396 iDiLVnNAGi~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaa  473 (604)
T 2et6_A          396 IDILVNNAGIL--RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAG  473 (604)
T ss_dssp             CCEEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHH
Confidence            99999999987  4566889999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +.+|+++++.|++++||+||+|+||. +|+|.......        .           .....+|+|+|+.+.||+++.+
T Consensus       474 l~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~--------~-----------~~~~~~pe~vA~~v~~L~s~~~  533 (604)
T 2et6_A          474 ILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE--------Q-----------DKNLYHADQVAPLLVYLGTDDV  533 (604)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSSCGGGTHHHHHHTTSTTC
T ss_pred             HHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch--------h-----------hccCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999996 99986532110        0           0235689999999999999988


Q ss_pred             CcccccEEEecCCcccc
Q 022418          269 KYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~~  285 (297)
                      . +||++|.+|||+...
T Consensus       534 ~-itG~~~~vdGG~~~~  549 (604)
T 2et6_A          534 P-VTGETFEIGGGWIGN  549 (604)
T ss_dssp             C-CCSCEEEEETTEEEE
T ss_pred             C-CCCcEEEECCCeeEe
Confidence            8 999999999997653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=8.9e-41  Score=286.90  Aligned_cols=225  Identities=13%  Similarity=0.102  Sum_probs=196.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc--CC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH--NQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~--g~  108 (297)
                      ..++|+++||||++|||++++++|+++|++|++++|+.+..+       ....++.+|++|+++++++++++.+++  ++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            357899999999999999999999999999999999986532       235678899999999999999999998  79


Q ss_pred             ccEEEECccCCCCCCCcc-CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSI-VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|+||||||..  ...++ .+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+.++...|++||+
T Consensus        77 iD~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A           77 VDAILCVAGGW--AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             EEEEEECCCCC--CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCEEEEccccc--CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHH
Confidence            99999999987  34445 67789999999999999999999999999964  489999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +++.|++.++.|++  ++||+||+|+||+++|++.......       .          . ..+..+|+|+|+.++++++
T Consensus       153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~----------~-~~~~~~~~~vA~~v~~l~~  214 (241)
T 1dhr_A          153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE-------A----------D-FSSWTPLEFLVETFHDWIT  214 (241)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-------S----------C-GGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc-------h----------h-hccCCCHHHHHHHHHHHhc
Confidence            99999999999998  8999999999999999986543110       0          0 0234679999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +...+++|+.+.+|||..-
T Consensus       215 ~~~~~~~G~~~~v~g~~~~  233 (241)
T 1dhr_A          215 GNKRPNSGSLIQVVTTDGK  233 (241)
T ss_dssp             TTTCCCTTCEEEEEEETTE
T ss_pred             CCCcCccceEEEEeCCCCc
Confidence            9999999999999998763

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.6e-40  Score=293.12  Aligned_cols=234  Identities=21%  Similarity=0.210  Sum_probs=192.1

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ...++++||+++||||++|||++++++|+++|++|++++|+.+++++..++++.++.++.+|++|+++++++++++    
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----   84 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----   84 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----
Confidence            4556899999999999999999999999999999999999999988888877778999999999999999888865    


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------  175 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------  175 (297)
                      +++|+||||||+..  .  ..+.+.++|++++++|+.+++.++++++|.+.+    +||++||..+..+           
T Consensus        85 ~~iD~lv~nAg~~~--~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~  156 (291)
T 3rd5_A           85 SGADVLINNAGIMA--V--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRS  156 (291)
T ss_dssp             CCEEEEEECCCCCS--C--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSS
T ss_pred             CCCCEEEECCcCCC--C--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccc
Confidence            78999999999863  2  245677889999999999999999999999864    7999999988755           


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHccCC--cEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC
Q 022418          176 --GLAQHTYSVSKSAIIGLVKSMAAELCEYG--IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC  251 (297)
Q Consensus       176 --~~~~~~Y~~sK~a~~~~~~~la~el~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (297)
                        .++...|++||++++.|++.++.+++++|  |+||+|+||+|+|++.........         ... ...+. +++.
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~---------~~~-~~~~~-~~~~  225 (291)
T 3rd5_A          157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG---------DAL-MSAAT-RVVA  225 (291)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------C
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH---------HHH-HHHHH-HHHh
Confidence              34456899999999999999999999888  999999999999999865421110         000 11122 4444


Q ss_pred             C-HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          252 E-PNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       252 ~-~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      . |+|+|+.++||++++  +++|+.+.+|||+...
T Consensus       226 ~~~~~~A~~~~~l~~~~--~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          226 TDADFGARQTLYAASQD--LPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHHHHHHHHHHHSC--CCTTCEEEETTSSSSC
T ss_pred             CCHHHHHHHHHHHHcCC--CCCCceeCCcccccCc
Confidence            4 999999999999984  8999999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.4e-40  Score=295.53  Aligned_cols=233  Identities=25%  Similarity=0.374  Sum_probs=198.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe---------CCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD---------IQHQLGQQTAKELGPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~---------r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ++++||+++||||++|||++++++|+++|++|++++         |+.+.+++..+++........+|+++.++++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            678999999999999999999999999999999965         45666666555542111224589999999999999


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~  180 (297)
                      ++.+.++++|+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+++.
T Consensus        85 ~~~~~~g~iD~lVnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~  162 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGIL--RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA  162 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCH
Confidence            9999999999999999987  44557788999999999999999999999999999877789999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|+.||++++.|++.++.++.++||+||+|+||++ |++.....        ....           ...++|+|+|+.+
T Consensus       163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--------~~~~-----------~~~~~p~dvA~~~  222 (319)
T 1gz6_A          163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--------PEDL-----------VEALKPEYVAPLV  222 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--------CHHH-----------HHHSCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--------Chhh-----------hccCCHHHHHHHH
Confidence            99999999999999999999999999999999998 87654321        1111           1135899999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccc
Q 022418          261 LYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +||+++. .+++|+.|.+|||+...
T Consensus       223 ~~l~s~~-~~~tG~~~~v~GG~~~~  246 (319)
T 1gz6_A          223 LWLCHES-CEENGGLFEVGAGWIGK  246 (319)
T ss_dssp             HHHTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHhCch-hhcCCCEEEECCCeEEE
Confidence            9999875 57999999999998653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-40  Score=283.30  Aligned_cols=223  Identities=17%  Similarity=0.169  Sum_probs=194.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH--NQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~--g~id  110 (297)
                      ++|+++||||++|||++++++|+++|++|++++|+.+..+       ....++.+|++|+++++++++++.+++  +++|
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            6799999999999999999999999999999999986532       235677899999999999999999998  7999


Q ss_pred             EEEECccCCCCCCCcc-CCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSI-VDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      +||||||..  ...++ .+.+.++|++.+++|+.+++.+++++.|.|++  .+++|++||..+..+.++...|++||+++
T Consensus        75 ~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  150 (236)
T 1ooe_A           75 GVFCVAGGW--AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV  150 (236)
T ss_dssp             EEEECCCCC--CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             EEEECCccc--CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHH
Confidence            999999987  34445 67789999999999999999999999999964  48999999999999988999999999999


Q ss_pred             HHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-HHhcC
Q 022418          190 IGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL-YLASD  266 (297)
Q Consensus       190 ~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~-~l~~~  266 (297)
                      +.|++.++.|+.  ++||+||+|+||+++|++.......    .              ...+..+|+|+|+.++ +|+++
T Consensus       151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~--------------~~~~~~~~~dvA~~i~~~l~s~  212 (236)
T 1ooe_A          151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----A--------------DHSSWTPLSFISEHLLKWTTET  212 (236)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----C--------------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----c--------------cccccCCHHHHHHHHHHHHcCC
Confidence            999999999998  8899999999999999976542110    0              0134568999999998 55588


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...++||+.+.+|||...
T Consensus       213 ~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          213 SSRPSSGALLKITTENGT  230 (236)
T ss_dssp             GGCCCTTCEEEEEEETTE
T ss_pred             CcccccccEEEEecCCCc
Confidence            889999999999999764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=5.3e-40  Score=283.84  Aligned_cols=225  Identities=16%  Similarity=0.173  Sum_probs=195.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+..+|+++||||++|||++++++|+++|++|++++|+.+..+         -..+.+|++|+++++++++++.++++++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            4566899999999999999999999999999999999986432         2467899999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||... ....+.+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+.+....|++||+++
T Consensus        89 D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  165 (251)
T 3orf_A           89 DTFVCAAGGWS-GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAAT  165 (251)
T ss_dssp             EEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCccCC-CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHH
Confidence            99999999873 2223667889999999999999999999999999965  58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q 022418          190 IGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD-  266 (297)
Q Consensus       190 ~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~-  266 (297)
                      +.|++.++.|++  ++||+|++|+||+++|++.......                  .+.+++++|+|+|+++++|+++ 
T Consensus       166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~~~~~~~dva~~i~~l~~~~  227 (251)
T 3orf_A          166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD------------------ANFDDWTPLSEVAEKLFEWSTNS  227 (251)
T ss_dssp             HHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT------------------SCGGGSBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc------------------ccccccCCHHHHHHHHHHHhcCc
Confidence            999999999986  8899999999999999986543211                  1126778999999999999999 


Q ss_pred             CCCcccccEEEecCCccc
Q 022418          267 DAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~  284 (297)
                      ...++||+++.+++|...
T Consensus       228 ~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          228 DSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             GGCCCTTCEEEEEEETTE
T ss_pred             cccCCcceEEEEecCCcc
Confidence            889999999999988754

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-39  Score=274.03  Aligned_cols=229  Identities=28%  Similarity=0.428  Sum_probs=194.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .        ..+.++.+|++|+++++++++++ ++++++|++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEE
Confidence            689999999999999999999999999999999875 1        34688999999999999999999 8889999999


Q ss_pred             ECccCCCCCCCccCC----CCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---C---ceEEEEecccccccCCCCccch
Q 022418          114 NNAGVACKTPRSIVD----LNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---S---GCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ||||...  ...+.+    .+.++|++.+++|+.+++.+++++.|.+.+++   .   +++|++||..+..+.++...|+
T Consensus        72 ~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (242)
T 1uay_A           72 SAAGVGL--AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  149 (242)
T ss_dssp             ECCCCCC--CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EcccccC--cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhh
Confidence            9999863  333433    34569999999999999999999999997654   3   4999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|++++.+++.++.|++++||+|++|+||+++|++.....        .. .........+..+++++|+|+|++++++
T Consensus       150 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l  220 (242)
T 1uay_A          150 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--------EK-AKASLAAQVPFPPRLGRPEEYAALVLHI  220 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--------HH-HHHHHHTTCCSSCSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc--------hh-HHHHHHhhCCCcccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999865321        11 1122222222226789999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++  .+++|+++.+|||+++.
T Consensus       221 ~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          221 LEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHC--TTCCSCEEEESTTCCCC
T ss_pred             hcC--CCCCCcEEEEcCCeecC
Confidence            987  68999999999998764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-39  Score=277.41  Aligned_cols=225  Identities=14%  Similarity=0.149  Sum_probs=191.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC--
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN--  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g--  107 (297)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.+.+++..+..+.++.++.+|++|+++++++++++.+.++  
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            357999999999999999999999999  9999999998877665332255789999999999999999999999988  


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------C-----CceEEEEecccccccC
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------R-----SGCILCTASVTGLLGG  176 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~g~iv~vss~~~~~~~  176 (297)
                      ++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.++      +     .+++|++||..+..+.
T Consensus        81 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           81 GLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCC-CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCcEEEECCcccC-CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence            9999999999873 15567788999999999999999999999999998754      4     6899999999988775


Q ss_pred             -------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCC
Q 022418          177 -------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGT  249 (297)
Q Consensus       177 -------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (297)
                             ++...|+.||++++.+++.++.++.++||+|++|+||+++|++...                         ..
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~  214 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------NA  214 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------CC
Confidence                   5678999999999999999999999999999999999999987532                         23


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      .++|+|+|+.+++++++...+++|+.+.+|||.
T Consensus       215 ~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          215 ALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             CCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            468999999999999988888999999999985

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-38  Score=277.45  Aligned_cols=241  Identities=28%  Similarity=0.390  Sum_probs=201.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C--CCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G--PNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~--~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +  .++.++.+|++|+++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999988777665544   2  457889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC--ceEEEEeccccc--ccCCCC
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS--GCILCTASVTGL--LGGLAQ  179 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--g~iv~vss~~~~--~~~~~~  179 (297)
                      +.++++|+||||||..  ....+.+.+.++|++.+++|+.+++.+++.++|.|++++.  +++|++||..+.  .+.++.
T Consensus       107 ~~~g~iD~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (279)
T 1xg5_A          107 SQHSGVDICINNAGLA--RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  184 (279)
T ss_dssp             HHHCCCSEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             HhCCCCCEEEECCCCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCC
Confidence            9999999999999987  4556778899999999999999999999999999987653  899999999887  566777


Q ss_pred             ccchhhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ..|+++|++++.|++.++.|+.  +.||+|++|+||+++|++.......     ..+...    ...+. .++++|+|+|
T Consensus       185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~----~~~~~-~~~~~~~dvA  254 (279)
T 1xg5_A          185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-----DPEKAA----ATYEQ-MKCLKPEDVA  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-----CHHHHH----HHHC----CBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc-----ChhHHh----hhccc-ccCCCHHHHH
Confidence            8999999999999999999998  7899999999999999985332211     111111    11122 5678999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      +++++++++...+.+|+....++|
T Consensus       255 ~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          255 EAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHhcCCcceEeeeEEEccCC
Confidence            999999999888888876655554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-39  Score=280.98  Aligned_cols=240  Identities=29%  Similarity=0.409  Sum_probs=197.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++.+.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988777665554     2357889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCCCccch
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++|+||||||...          .++|++.+++|+.+++.+++.++|.|++++   .+++|++||..+..+.+....|+
T Consensus        85 g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             SCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            99999999999651          245789999999999999999999997643   68999999999998888889999


Q ss_pred             hhHHHHHHHHHHH--HHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcCCC--HHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          184 VSKSAIIGLVKSM--AAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAGVD--ASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       184 ~sK~a~~~~~~~l--a~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      +||++++.+++.+  +.|+.+.||+||+|+||+++|++........ .....  ...... ...    ..++++|+|+|+
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dvA~  229 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD-MIK----YYGILDPPLIAN  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH-HHH----HHCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH-Hhc----cccCCCHHHHHH
Confidence            9999999999985  6889999999999999999999865321110 00000  001000 001    134679999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++++|+++.  +++|+++.+|||......+
T Consensus       230 ~v~~l~s~~--~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          230 GLITLIEDD--ALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHHCT--TCSSCEEEEETTTEEEECC
T ss_pred             HHHHHhcCc--CCCCcEEEecCCCcccccC
Confidence            999999875  4899999999998765443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=3.8e-39  Score=278.76  Aligned_cols=238  Identities=23%  Similarity=0.239  Sum_probs=194.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCch--hHHHHHHHh-CCCeeEEEecCCCH-HHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQ--LGQQTAKEL-GPNATFIACDVTKE-SDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~--~~~~~~~~~-~~~v~~~~~D~s~~-~~i~~~~~~~~~  104 (297)
                      |++++|+++||||++|||++++++|+++|++ |++++|+.+  ..+++.+.. +.++.++.+|++|+ ++++++++++.+
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            4688999999999999999999999999997 999999873  344443333 34688899999998 999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCCCcc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +++++|+||||||..          +.++|++.+++|+.+++.++++++|.|.+++   .+++|++||..+..+.+....
T Consensus        81 ~~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           81 QLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             hcCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            999999999999964          2356899999999999999999999997653   589999999999998888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||++++.|++.++.++.++||+|++|+||+++|++........  ... +..... ...    ..+.+|+|+|+.++
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~-~~~~~~-~~~----~~~~~~~dvA~~i~  222 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVE-PRVAEL-LLS----HPTQTSEQCGQNFV  222 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSC-TTHHHH-HTT----SCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhh--hhh-HHHHHH-Hhc----CCCCCHHHHHHHHH
Confidence            9999999999999999999888999999999999999865321000  000 111111 111    23458999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccCC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++++   .+.+|+.+.+|||+.....+
T Consensus       223 ~~~~---~~~~G~~~~v~gG~~~~~~~  246 (254)
T 1sby_A          223 KAIE---ANKNGAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             HHHH---HCCTTCEEEEETTEEEECCC
T ss_pred             HHHH---cCCCCCEEEEeCCceeEecc
Confidence            9996   46899999999997554433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=7.4e-40  Score=315.70  Aligned_cols=239  Identities=24%  Similarity=0.369  Sum_probs=188.2

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHHHHhCCCeeEEEecCCCHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI---------QHQLGQQTAKELGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   97 (297)
                      ....+++||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++........+|+++.+++++
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~   91 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAK   91 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence            3456899999999999999999999999999999999988         6666666655552111223589999999999


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL  177 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~  177 (297)
                      +++++.++++++|+||||||+.  ....+.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.+
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~--~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGIL--RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHC----------CEECCCCCC--CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHCCCCcEEEECCCCC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            9999999999999999999987  55678899999999999999999999999999999988889999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      .+..|++||++++.|++.++.|++++||+||+|+||++ |++.....        .+..           .+.++|+|+|
T Consensus       170 ~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~--------~~~~-----------~~~~~pedvA  229 (613)
T 3oml_A          170 GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL--------PDIL-----------FNELKPKLIA  229 (613)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC--------CHHH-----------HTTCCGGGTH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc--------chhh-----------hhcCCHHHHH
Confidence            99999999999999999999999999999999999975 55543221        1111           2345899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +.++||+++. .++||++|.+|||+.....+
T Consensus       230 ~~v~~L~s~~-~~~tG~~i~vdGG~~~~~~~  259 (613)
T 3oml_A          230 PVVAYLCHES-CEDNGSYIESAAGWATKLHM  259 (613)
T ss_dssp             HHHHHTTSTT-CCCCSCEEEEETTEEEEECC
T ss_pred             HHHHHhcCCC-cCCCceEEEECCCeEEEEEE
Confidence            9999999998 89999999999998876444

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.1e-38  Score=282.00  Aligned_cols=236  Identities=23%  Similarity=0.340  Sum_probs=188.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CC--CeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GP--NATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~--~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.  ++.++.+|++|++++.++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999888776654   33  789999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEecccccccCCC
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLA  178 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vss~~~~~~~~~  178 (297)
                      .++++|+||||||+.  ...++.+.+.++|++++++|+.+++.++++++|.+.++      +.|+||++||..+..+.+.
T Consensus        84 ~~g~id~lv~nAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           84 RFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HTCCEEEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             hCCCCCEEEECCCcC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            999999999999987  56678889999999999999999999999999999753      5799999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hhcCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IYAGVDASRLLELVYSTGVLEGTHCEPNDI  256 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  256 (297)
                      +..|++||++++.|++.++.|+.++||+|++|+||+|+|++.......  ........................++|+|+
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v  241 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI  241 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence            999999999999999999999999999999999999999987643211  000000000000000000000122799999


Q ss_pred             HHHHHHHhcCC
Q 022418          257 ANAALYLASDD  267 (297)
Q Consensus       257 a~~~~~l~~~~  267 (297)
                      |+.++.+++.+
T Consensus       242 A~~~~~al~~~  252 (319)
T 3ioy_A          242 GARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHcC
Confidence            99999998765

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1e-38  Score=287.83  Aligned_cols=241  Identities=13%  Similarity=0.029  Sum_probs=198.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhH---------------HHHHHHhCCCeeEEEecCCCHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLG---------------QQTAKELGPNATFIACDVTKESD   94 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~---------------~~~~~~~~~~v~~~~~D~s~~~~   94 (297)
                      .-.+|++|||||++|||+++++.|++ +|++|++++|+.+..               .+..+..+.++..+.+|++|+++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            46789999999999999999999999 999999999876532               22334446788899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCCCC-----------CCCcc---------------------CCCCHHHHHHHHHHhh
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVACK-----------TPRSI---------------------VDLNLEVFDQVMRINV  142 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  142 (297)
                      ++++++++.+++|++|+||||||....           ..+++                     .+.+.++|++.+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            999999999999999999999997410           12233                     6789999999999999


Q ss_pred             hHHH-HHHHHHHH-hccCCCCceEEEEecccccccCCCC--ccchhhHHHHHHHHHHHHHHHccC-CcEEEEEeCCCccC
Q 022418          143 RGVV-AGIKHSTR-VMIPRRSGCILCTASVTGLLGGLAQ--HTYSVSKSAIIGLVKSMAAELCEY-GIRINCISPFAIPT  217 (297)
Q Consensus       143 ~~~~-~l~~~~~~-~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~-~i~v~~v~pG~v~t  217 (297)
                      .+.| .+++++.+ .|.+ +.|++|++||+.+..+.+.+  ..|++||++++.++++++.|++++ |||||+|+||++.|
T Consensus       204 ~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            9998 77887765 4544 46999999999999988877  899999999999999999999999 99999999999999


Q ss_pred             cchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          218 PFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.....       ..+.+......  ++ ++.++|||+++++.+|+++   ++.|+.+.+|++..++
T Consensus       283 ~~s~~ip-------~~p~y~~~l~~--~m-kr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          283 QASSAIP-------MMPLYLSLLFK--VM-KEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             HHHHTST-------THHHHHHHHHH--HH-HHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             chhhcCC-------CCcHHHHHHHH--HH-hcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            9765321       11122222222  22 7888999999999999988   5889999999986654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=4.5e-39  Score=292.57  Aligned_cols=249  Identities=13%  Similarity=0.070  Sum_probs=199.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhHH---------------HHHHHhCCCeeEEEecCCCHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQ---------------QTAKELGPNATFIACDVTKESDV   95 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~---------------~~~~~~~~~v~~~~~D~s~~~~i   95 (297)
                      ..+|++|||||++|||+++++.|++ +|++|++++|+.+.++               +..+..+.++..+.+|++|++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3589999999999999999999999 9999999999865432               33344577889999999999999


Q ss_pred             HHHHHHHHHHc-CCccEEEECccCCC-----------CCCCcc---------------------CCCCHHHHHHHHHHhh
Q 022418           96 SDAVDFTISKH-NQLDIMYNNAGVAC-----------KTPRSI---------------------VDLNLEVFDQVMRINV  142 (297)
Q Consensus        96 ~~~~~~~~~~~-g~id~li~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~  142 (297)
                      +++++.+.+++ |++|+||||||...           ...+++                     .+.+.++|++.+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 99999999999720           012223                     3678999999999999


Q ss_pred             hHHH-HHHHHHHHhccCCCCceEEEEecccccccCCCC--ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc
Q 022418          143 RGVV-AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ--HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF  219 (297)
Q Consensus       143 ~~~~-~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~  219 (297)
                      .+.| .+++++.+.+...+.|++|++||..+..+.+.+  .+|++||+++++|+++++.|++++|||||+|+||+|+|++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9987 778887764332346899999999999887766  8999999999999999999999999999999999999998


Q ss_pred             hhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccc-ccEEEecCCcccc-cCCCCC
Q 022418          220 VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS-GHNLVVDGGFTSF-KNLKLP  291 (297)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~t-G~~i~vdgG~~~~-~~~~~~  291 (297)
                      ......       .+.+......  ++ ++.++||||++.+.||+++. -|.+ |+...+|++..++ +.+-+.
T Consensus       299 ~~~ip~-------~~~~~~~~~~--~m-~r~G~pEdva~~v~~L~sd~-ly~~~~~~~~~d~~~~~r~d~~e~~  361 (422)
T 3s8m_A          299 SAAIPV-------MPLYISMVYK--IM-KEKGLHEGTIEQLDRLFRER-LYRQDGQPAEVDEQNRLRLDDWELR  361 (422)
T ss_dssp             GGGSTH-------HHHHHHHHHH--HH-HHTTCCCCHHHHHHHHHHHT-TTCTTCCCCCCCTTSCEESCTTTTS
T ss_pred             hhcCCC-------ChHHHHHHHh--hh-cCCcChHHHHHHHHHHhcch-hhccCCCCcccCCCCCCccchhhCC
Confidence            764311       1111111111  23 78899999999999999987 4776 7777688876654 554443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-37  Score=276.72  Aligned_cols=244  Identities=20%  Similarity=0.233  Sum_probs=186.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC-----chhHHHHHH---HhCCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-----HQLGQQTAK---ELGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~-----~~~~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      |++++|+++||||++|||++++++|+++|++|++++|+     .+.+++..+   ..+.++.++.+|++|++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            45789999999999999999999999999999998876     333344333   3367899999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-CCCCc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQH  180 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-~~~~~  180 (297)
                      +.+++|++|+||||||..  ..+++.+.+.++|++++++|+.+++.++++++|.|++++.|++|++||..+..+ .+...
T Consensus        81 ~~~~~g~iD~lVnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~  158 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHM--VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLA  158 (324)
T ss_dssp             HHHHHSCCSEEEECCCCC--BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCH
T ss_pred             HHHHcCCCCEEEECCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcch
Confidence            999999999999999987  566788899999999999999999999999999998888899999999998854 45567


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH---------HhhcC--C--CHHHHHHHHHhcCCCC
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS---------QIYAG--V--DASRLLELVYSTGVLE  247 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~--~--~~~~~~~~~~~~~~~~  247 (297)
                      .|++||++++.++++++.|++++||+|++|+||+++|++......         ..+..  .  ..+........   ..
T Consensus       159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~  235 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA---IV  235 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH---TS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH---hc
Confidence            899999999999999999999999999999999999875421100         00000  0  01111111111   11


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEec
Q 022418          248 GTHCEPNDIANAALYLASDDAKYVSGHNLVVD  279 (297)
Q Consensus       248 ~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vd  279 (297)
                      ....+|+++|++++.++..... .....+.++
T Consensus       236 ~~~~~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          236 PPDADVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             CTTCCTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             CCCCCHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            3346899999999999876522 234566665

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1e-37  Score=271.38  Aligned_cols=229  Identities=17%  Similarity=0.160  Sum_probs=197.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHH--hCCCeeEEEecCCCHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNG---AKVVIADIQHQLGQQTAKE--LGPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G---~~Vi~~~r~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ...++++|+++||||++|||++++++|+++|   ++|++++|+.+..+...+.  .+.++.++.+|++|+++++++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            4467899999999999999999999999999   9999999998765543221  2567899999999999999999999


Q ss_pred             HHHcC--CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------C-----CceEEEEec
Q 022418          103 ISKHN--QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------R-----SGCILCTAS  169 (297)
Q Consensus       103 ~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~g~iv~vss  169 (297)
                      .+.++  ++|+||||||... ...++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .+++|++||
T Consensus        95 ~~~~g~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAP-KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHhcCCCCccEEEECCCcCC-CccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence            99888  8999999999873 15567788999999999999999999999999998754      2     589999999


Q ss_pred             ccccccCC---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCC
Q 022418          170 VTGLLGGL---AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL  246 (297)
Q Consensus       170 ~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (297)
                      ..+..+.+   +...|+++|++++.|++.++.++.++||+|++|+||+|+|++...                        
T Consensus       174 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  229 (267)
T 1sny_A          174 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------  229 (267)
T ss_dssp             GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------
Confidence            98877653   667899999999999999999999999999999999999997531                        


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                       ....+|+++|+.+++++++...+.+|+.+.+|||.
T Consensus       230 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          230 -SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             -TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             -CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence             23568999999999999988889999999999985

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=7e-39  Score=275.69  Aligned_cols=225  Identities=21%  Similarity=0.240  Sum_probs=162.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++++|+++||||++|||++++++|++ |++|++++|+.+.+++..+  ...+.++.+|+++.++ .+.+.+..++++++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVL-EEGGVDKLKNLDHV   76 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--hcCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence            468899999999999999999999988 9999999999988777655  2468899999998876 44455555677899


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |++|||||..  ....+.+.+.++|++.+++|+.+++.++++++|.|++++ |++|++||..+..+.+....|++||+++
T Consensus        77 d~lv~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           77 DTLVHAAAVA--RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHAL  153 (245)
T ss_dssp             SEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHH
T ss_pred             CEEEECCCcC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHH
Confidence            9999999987  455677889999999999999999999999999997654 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++||+|++|+||+++|++.........              .....+++++|+|+|+++++|++... 
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------------~~~~~~~~~~p~dvA~~i~~l~~~~~-  218 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG--------------TNFRPEIYIEPKEIANAIRFVIDAGE-  218 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHHTSCT-
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh--------------cccccccCCCHHHHHHHHHHHHcCCC-
Confidence            999999999999999999999999999998765432210              00122668899999999999998763 


Q ss_pred             cccccEEEe
Q 022418          270 YVSGHNLVV  278 (297)
Q Consensus       270 ~~tG~~i~v  278 (297)
                        +|+++++
T Consensus       219 --~~~~~~i  225 (245)
T 3e9n_A          219 --TTQITNV  225 (245)
T ss_dssp             --TEEEEEE
T ss_pred             --ccceeee
Confidence              4555554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-37  Score=270.63  Aligned_cols=219  Identities=24%  Similarity=0.347  Sum_probs=193.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999999988777665554   56789999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|++
T Consensus       105 ~~g~iD~li~~Ag~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  182 (272)
T 1yb1_A          105 EIGDVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  182 (272)
T ss_dssp             HTCCCSEEEECCCCC--CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             HCCCCcEEEECCCcC--CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHH
Confidence            999999999999987  445577788999999999999999999999999998777899999999999888888889999


Q ss_pred             hHHHHHHHHHHHHHHHc---cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELC---EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       185 sK~a~~~~~~~la~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +|++++.+++.++.|+.   +.||+|++|+||+++|++....         ...           .+++++|+|+|+.++
T Consensus       183 sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~-----------~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          183 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---------STS-----------LGPTLEPEEVVNRLM  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---------HHH-----------HCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---------ccc-----------ccCCCCHHHHHHHHH
Confidence            99999999999999996   6799999999999999985321         000           156789999999999


Q ss_pred             HHhcCCC
Q 022418          262 YLASDDA  268 (297)
Q Consensus       262 ~l~~~~~  268 (297)
                      +++..+.
T Consensus       243 ~~~~~~~  249 (272)
T 1yb1_A          243 HGILTEQ  249 (272)
T ss_dssp             HHHHTTC
T ss_pred             HHHHcCC
Confidence            9997663

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1e-38  Score=276.19  Aligned_cols=221  Identities=24%  Similarity=0.353  Sum_probs=174.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||++|||++++++|+++|++|++++|+.+.++.         . +.+|++++++++++++++   ++++|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKC---SKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHh---CCCCCEEEE
Confidence            689999999999999999999999999999998765331         1 678999999998887733   379999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc---------------------
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL---------------------  173 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~---------------------  173 (297)
                      |||.... .        +.|++.+++|+.+++.++++++|.|++++.+++|++||..+.                     
T Consensus        69 ~Ag~~~~-~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (257)
T 1fjh_A           69 CAGLGPQ-T--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CCCCCTT-C--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CCCCCCC-c--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhh
Confidence            9997620 1        128999999999999999999999988778999999999887                     


Q ss_pred             -------ccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh-cCC
Q 022418          174 -------LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS-TGV  245 (297)
Q Consensus       174 -------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  245 (297)
                             .+.++...|+.||++++.+++.++.++.++||+|++|+||+++|++.......       ......... ..+
T Consensus       140 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~  212 (257)
T 1fjh_A          140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-------PRYGESIAKFVPP  212 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------CCCS
T ss_pred             hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc-------hhHHHHHHhcccc
Confidence                   34446679999999999999999999999999999999999999987543111       000011111 222


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      . +++++|+|+|+++++|+++...++||+.+.+|||+...
T Consensus       213 ~-~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          213 M-GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             T-TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             c-CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            3 67899999999999999988889999999999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-36  Score=269.60  Aligned_cols=220  Identities=24%  Similarity=0.314  Sum_probs=185.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCH-HHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKE-SDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~-~~i~~~~~~~~~  104 (297)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.++.+|++|+ ++++++++.+.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998887776665    35789999999998 999999999999


Q ss_pred             HcCCccEEEECccCCCCC----------------------------CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhc
Q 022418          105 KHNQLDIMYNNAGVACKT----------------------------PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM  156 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  156 (297)
                      +++++|+||||||+....                            ...+.+.+.+++++.+++|+.+++.++++++|.|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            999999999999986310                            1134567899999999999999999999999999


Q ss_pred             cCCCCceEEEEecccccccC-------------------------------------------CCCccchhhHHHHHHHH
Q 022418          157 IPRRSGCILCTASVTGLLGG-------------------------------------------LAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       157 ~~~~~g~iv~vss~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~  193 (297)
                      ++++.++||++||..+..+.                                           ++...|++||++++.|+
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            88888999999999887653                                           34578999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      +.++.++.+  |+||+|+||+|+|++...                         ....+|++.|+.++.++.......+|
T Consensus       248 ~~la~e~~~--i~v~~v~PG~v~T~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~~~~~g  300 (311)
T 3o26_A          248 RVLANKIPK--FQVNCVCPGLVKTEMNYG-------------------------IGNYTAEEGAEHVVRIALFPDDGPSG  300 (311)
T ss_dssp             HHHHHHCTT--SEEEEECCCSBCSGGGTT-------------------------CCSBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred             HHHHhhcCC--ceEEEecCCceecCCcCC-------------------------CCCCCHHHHHHHHHHHHhCCCCCCCc
Confidence            999999854  999999999999998643                         12247999999999998765444444


Q ss_pred             cEE
Q 022418          274 HNL  276 (297)
Q Consensus       274 ~~i  276 (297)
                      ..+
T Consensus       301 ~~~  303 (311)
T 3o26_A          301 FFY  303 (311)
T ss_dssp             CEE
T ss_pred             eEe
Confidence            443

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=7.1e-38  Score=280.57  Aligned_cols=240  Identities=23%  Similarity=0.308  Sum_probs=185.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHh------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ---QTAKEL------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.++   +..+..      +.++.++.+|++|+++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            4789999999999999999999999999988887654432   222222      357899999999999999999987 


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                       .++++|+||||||..  ...++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.+....|+
T Consensus        80 -~~g~iD~lVnnAG~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLG--LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             -TTSCCSEEEECCCCC--CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             -hcCCCCEEEECCCcC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence             358999999999986  45567788999999999999999999999999999877789999999999999888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH---hhcCCCHHH---HHHHHHh-cCCCCCCC-CCHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ---IYAGVDASR---LLELVYS-TGVLEGTH-CEPND  255 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~---~~~~~~~-~~~~~~~~-~~~~d  255 (297)
                      +||++++.|++.++.|+.++||+|++|+||+|+|++.......   .........   +...... ..+. +++ .+|+|
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ped  235 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-REAAQNPEE  235 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-HHHCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhh-hhcCCCHHH
Confidence            9999999999999999999999999999999999987543210   000011110   0011000 0011 222 58999


Q ss_pred             HHHHHHHHhcC---CCCcccccEEE
Q 022418          256 IANAALYLASD---DAKYVSGHNLV  277 (297)
Q Consensus       256 ia~~~~~l~~~---~~~~~tG~~i~  277 (297)
                      +|+.++++++.   ...|++|+.+.
T Consensus       236 vA~~i~~l~~~~~~~~~~~tg~~~~  260 (327)
T 1jtv_A          236 VAEVFLTALRAPKPTLRYFTTERFL  260 (327)
T ss_dssp             HHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             HHHHHHHHHcCCCCCeEEEeCchHH
Confidence            99999999875   35678887643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=4e-36  Score=261.78  Aligned_cols=219  Identities=23%  Similarity=0.275  Sum_probs=187.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++|+++||||++|||++++++|++ +|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999 9999999999988777665554   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCC-HHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLN-LEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------  175 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------  175 (297)
                      ++|+||||||...  .. ..+.+ .+++++.+++|+.+++.++++++|.+++  .+++|++||..+..+           
T Consensus        82 ~id~li~~Ag~~~--~~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAF--KV-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCC--CT-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCcccc--cC-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhh
Confidence            9999999999863  22 22334 5899999999999999999999999864  479999999877632           


Q ss_pred             ------------------------------CCCCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCCccCcchh
Q 022418          176 ------------------------------GLAQHTYSVSKSAIIGLVKSMAAELCE----YGIRINCISPFAIPTPFVM  221 (297)
Q Consensus       176 ------------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~pG~v~t~~~~  221 (297)
                                                    ..+...|+.||++++.+++.++.++.+    .||+|++|+||+|+|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                          112378999999999999999999987    7999999999999999753


Q ss_pred             hHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCC
Q 022418          222 EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD--AKYVSGHNLVVDGG  281 (297)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~--~~~~tG~~i~vdgG  281 (297)
                      .                         .++.+|+|+|+.+++|++.+  ..+++|+.|. |++
T Consensus       237 ~-------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P-------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T-------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c-------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                         24578999999999999854  4689999987 554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.1e-36  Score=275.89  Aligned_cols=248  Identities=14%  Similarity=0.070  Sum_probs=198.6

Q ss_pred             CCCCEEEEEcCCCcHHHH--HHHHHHHCCCeEEEEeCCchh---------------HHHHHHHhCCCeeEEEecCCCHHH
Q 022418           32 LEEKVALITGAASGIGKA--TAAKFISNGAKVVIADIQHQL---------------GQQTAKELGPNATFIACDVTKESD   94 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~--ia~~l~~~G~~Vi~~~r~~~~---------------~~~~~~~~~~~v~~~~~D~s~~~~   94 (297)
                      ..||++|||||++|||++  ++++|+++|++|++++|+.+.               +++..+..+.++..+.+|++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            789999999999999999  999999999999999986532               233334446788999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCCC-----------CCCCcc---------------------CCCCHHHHHHHHHHhh
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVAC-----------KTPRSI---------------------VDLNLEVFDQVMRINV  142 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~  142 (297)
                      ++++++++.+++|++|+||||||...           ...+++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999740           011222                     4578999999999999


Q ss_pred             hHHH-HHHHHHHHhccCCCCceEEEEecccccccCCCC--ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCc
Q 022418          143 RGVV-AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ--HTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTP  218 (297)
Q Consensus       143 ~~~~-~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~  218 (297)
                      .+.+ .+++++.+.....+.|++|++||..+..+.+.+  ..|++||++++.|+++++.|+++ +||+||+|+||+|+|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9888 778887765444456899999999999988888  99999999999999999999999 9999999999999999


Q ss_pred             chhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc-cCCCCC
Q 022418          219 FVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF-KNLKLP  291 (297)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~-~~~~~~  291 (297)
                      +......       .+.+......  ++ ++.++|||+++.+.+|+++  .+.+|+.+.+|||..++ ..+-+.
T Consensus       298 ~s~~ip~-------~p~y~~~~~~--~m-k~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e~~  359 (418)
T 4eue_A          298 ASAYIPT-------FPLYAAILYK--VM-KEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLELR  359 (418)
T ss_dssp             HHHTSTT-------HHHHHHHHHH--HH-HHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTTTC
T ss_pred             hhhcCCC-------CcHHHHHHHH--HH-hhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhhcC
Confidence            7653210       1111111111  12 5668899999999999987  45689999999865444 555443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.1e-35  Score=257.23  Aligned_cols=217  Identities=20%  Similarity=0.203  Sum_probs=186.3

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   + .++.++.+|++|+++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998877765543   3 3688999999999999999999999


Q ss_pred             HcCCccEEEEC-ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          105 KHNQLDIMYNN-AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++++|++||| +|...   ..+.+.+.+++++.+++|+.+++.++++++|.|.++ .+++|++||..+..+.++...|+
T Consensus       103 ~~g~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  178 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYS  178 (286)
T ss_dssp             HHTSCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHH
Confidence            99999999999 56542   234567899999999999999999999999998653 58999999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAEL--CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +||++++.+++.++.|+  ...||+|++|+||+++|++.......       .           ......+|+|+|+.++
T Consensus       179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~-----------~~~~~~~~~~vA~~i~  240 (286)
T 1xu9_A          179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG-------I-----------VHMQAAPKEECALEII  240 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG-------G-----------GGGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc-------c-----------ccCCCCCHHHHHHHHH
Confidence            99999999999999999  57799999999999999976532110       0           0023568999999999


Q ss_pred             HHhcCC
Q 022418          262 YLASDD  267 (297)
Q Consensus       262 ~l~~~~  267 (297)
                      ..+..+
T Consensus       241 ~~~~~~  246 (286)
T 1xu9_A          241 KGGALR  246 (286)
T ss_dssp             HHHHTT
T ss_pred             HHHhcC
Confidence            988654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=4.6e-34  Score=238.22  Aligned_cols=198  Identities=18%  Similarity=0.181  Sum_probs=173.8

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +++||||+||||++++++|+ +|++|++++|+.+              .+.+|++++++++++++.+    +++|++|||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~~   65 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDITNIDSIKKMYEQV----GKVDAIVSA   65 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTTCHHHHHHHHHHH----CCEEEEEEC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecCCHHHHHHHHHHh----CCCCEEEEC
Confidence            89999999999999999999 9999999999864              4789999999999988765    789999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHH
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS  195 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  195 (297)
                      ||..  ...++.+.+.++|++.+++|+.+++.+++++.+.+.+  .+++|++||..+..+.++...|+.+|++++.+++.
T Consensus        66 ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~  141 (202)
T 3d7l_A           66 TGSA--TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKS  141 (202)
T ss_dssp             CCCC--CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCC--CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence            9976  4556778899999999999999999999999999854  38999999999988888889999999999999999


Q ss_pred             HHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccE
Q 022418          196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN  275 (297)
Q Consensus       196 la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~  275 (297)
                      ++.|+ +.||+++.|+||+++|++....                   ...+.+++++|+|+|++++++++   .+.+|+.
T Consensus       142 ~~~e~-~~gi~v~~v~pg~v~~~~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~  198 (202)
T 3d7l_A          142 AAIEM-PRGIRINTVSPNVLEESWDKLE-------------------PFFEGFLPVPAAKVARAFEKSVF---GAQTGES  198 (202)
T ss_dssp             HTTSC-STTCEEEEEEECCBGGGHHHHG-------------------GGSTTCCCBCHHHHHHHHHHHHH---SCCCSCE
T ss_pred             HHHHc-cCCeEEEEEecCccCCchhhhh-------------------hhccccCCCCHHHHHHHHHHhhh---ccccCce
Confidence            99998 7899999999999999864210                   00122678899999999999883   4689999


Q ss_pred             EEec
Q 022418          276 LVVD  279 (297)
Q Consensus       276 i~vd  279 (297)
                      +++|
T Consensus       199 ~~vd  202 (202)
T 3d7l_A          199 YQVY  202 (202)
T ss_dssp             EEEC
T ss_pred             EecC
Confidence            9987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=7.3e-35  Score=251.08  Aligned_cols=225  Identities=24%  Similarity=0.293  Sum_probs=183.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+||||++++++|+++|++|++++|+.+..+.          .+.+|++++++++++++++   .+++|+|||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------DLSTPGGRETAVAAVLDRC---GGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSHHHHHHHHHHHHHHH---TTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------cccCCcccHHHHHHHHHHc---CCCccEEEE
Confidence            689999999999999999999999999999998764321          1678999999998888754   368999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC------------------
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG------------------  176 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~------------------  176 (297)
                      |||...  .       .+.+++.+++|+.+++.+++++.+.|++.+.+++|++||..+..+.                  
T Consensus        69 ~Ag~~~--~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (255)
T 2dkn_A           69 CAGVGV--T-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARA  139 (255)
T ss_dssp             CCCCCT--T-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHH
T ss_pred             CCCCCC--c-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhh
Confidence            999762  1       1237899999999999999999999987777999999999887654                  


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCC
Q 022418          177 --------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEG  248 (297)
Q Consensus       177 --------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (297)
                              ++...|+.+|++++.+++.++.++.+.||++++++||+++|++.......   . .....   ......+.+
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~---~-~~~~~---~~~~~~~~~  212 (255)
T 2dkn_A          140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD---P-RYGES---TRRFVAPLG  212 (255)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC---T-TTHHH---HHSCCCTTS
T ss_pred             hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc---h-hhHHH---HHHHHHHhc
Confidence                    45678999999999999999999998999999999999999987654221   1 11111   111100336


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++++|+|+|+++++++++...+++|+.+++|||......+
T Consensus       213 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          213 RGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            7899999999999999887778999999999998876544

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=2.2e-34  Score=297.54  Aligned_cols=241  Identities=18%  Similarity=0.233  Sum_probs=198.1

Q ss_pred             CccCCCCCEEEEEcCCCc-HHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASG-IGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~   98 (297)
                      ..++++||++|||||++| ||++++++|+++|++|+++ +|+.+.+++..+++       +.++.++.||++|+++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            446799999999999998 9999999999999999998 57777665544433       45788999999999999999


Q ss_pred             HHHHHHH-----cC-CccEEEECccCCCCCCC-ccCCCC--HHHHHHHHHHhhhHHHHHHHHH--HHhccCCCCceEEEE
Q 022418           99 VDFTISK-----HN-QLDIMYNNAGVACKTPR-SIVDLN--LEVFDQVMRINVRGVVAGIKHS--TRVMIPRRSGCILCT  167 (297)
Q Consensus        99 ~~~~~~~-----~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~g~iv~v  167 (297)
                      ++++.++     +| ++|+||||||+.  ... ++.+.+  .++|++++++|+.+++.+++++  .|.|.+++.|+||++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~--~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnI  826 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIP--EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  826 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCC--CCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcC--CCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEE
Confidence            9999988     66 999999999987  444 677888  8999999999999999999988  788877777899999


Q ss_pred             ecccccccCCCCccchhhHHHHHHH-HHHHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhcCC
Q 022418          168 ASVTGLLGGLAQHTYSVSKSAIIGL-VKSMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYSTGV  245 (297)
Q Consensus       168 ss~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (297)
                      ||..+..+  ....|++||++++.| ++.++.+++++ |+||+|+||+|+ |+|....      .....    ... ..+
T Consensus       827 SS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~------~~~~~----~~~-~~p  892 (1887)
T 2uv8_A          827 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN------NIIAE----GIE-KMG  892 (1887)
T ss_dssp             CSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C------CTTHH----HHH-TTS
T ss_pred             cChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc------hhHHH----HHH-hcC
Confidence            99998877  567999999999999 89999999887 999999999999 7875420      00111    111 111


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCC-CCcccccEEEec--CCccccc
Q 022418          246 LEGTHCEPNDIANAALYLASDD-AKYVSGHNLVVD--GGFTSFK  286 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~-~~~~tG~~i~vd--gG~~~~~  286 (297)
                        -+.++|+|+|+.++||+++. ..++||+.|.+|  ||+....
T Consensus       893 --lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          893 --VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             --CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             --CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence              25669999999999999987 689999999875  9987553

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-35  Score=294.45  Aligned_cols=243  Identities=19%  Similarity=0.232  Sum_probs=201.2

Q ss_pred             CCCccCCCCCEEEEEcCCCc-HHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHH
Q 022418           26 STESRKLEEKVALITGAASG-IGKATAAKFISNGAKVVIA-DIQHQLGQQTAKEL-------GPNATFIACDVTKESDVS   96 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~-~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~   96 (297)
                      ....++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++       +.++.++.+|++|+++++
T Consensus       468 a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe  547 (1688)
T 2pff_A          468 XXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE  547 (1688)
T ss_dssp             SSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred             cccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence            34556799999999999998 9999999999999999998 57766666555554       446888999999999999


Q ss_pred             HHHHHHHHH-----cC-CccEEEECccCCCCCCC-ccCCCC--HHHHHHHHHHhhhHHHHHHHHH--HHhccCCCCceEE
Q 022418           97 DAVDFTISK-----HN-QLDIMYNNAGVACKTPR-SIVDLN--LEVFDQVMRINVRGVVAGIKHS--TRVMIPRRSGCIL  165 (297)
Q Consensus        97 ~~~~~~~~~-----~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~g~iv  165 (297)
                      ++++++.++     +| ++|+||||||+.  ... ++.+.+  .++|++.+++|+.+++.+++++  .|.|.+++.|+||
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~--~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIV  625 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIP--EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  625 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCC--CCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcC--CCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEE
Confidence            999999988     77 999999999987  444 577787  9999999999999999999998  8888877778999


Q ss_pred             EEecccccccCCCCccchhhHHHHHHH-HHHHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          166 CTASVTGLLGGLAQHTYSVSKSAIIGL-VKSMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       166 ~vss~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                      ++||..+..+  ....|++||++++.| ++.++.++++. |+||+|+||+++ |+|....  ..    ....     ...
T Consensus       626 nISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~--e~----~~~~-----l~~  691 (1688)
T 2pff_A          626 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--NI----IAEG-----IEK  691 (1688)
T ss_dssp             CCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT--TT----CSTT-----TSS
T ss_pred             EEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc--hH----HHHH-----HHh
Confidence            9999998877  567999999999999 78888888877 999999999999 7775431  00    0000     011


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCC-CCcccccEEEec--CCccccc
Q 022418          244 GVLEGTHCEPNDIANAALYLASDD-AKYVSGHNLVVD--GGFTSFK  286 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~-~~~~tG~~i~vd--gG~~~~~  286 (297)
                      .+  -+..+|+|+|++++||+++. ..++||+.+.+|  ||+....
T Consensus       692 ip--lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          692 MG--VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             SS--CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             CC--CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            11  25569999999999999988 789999999875  9987643

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.9e-33  Score=290.01  Aligned_cols=240  Identities=20%  Similarity=0.227  Sum_probs=197.3

Q ss_pred             CccCCCCCEEEEEcCCCc-HHHHHHHHHHHCCCeEEEEe-CCchhHHHHH----HHh---CCCeeEEEecCCCHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASG-IGKATAAKFISNGAKVVIAD-IQHQLGQQTA----KEL---GPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~~-r~~~~~~~~~----~~~---~~~v~~~~~D~s~~~~i~~~   98 (297)
                      ..++++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..    +++   +.++.++.||++|+++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            446789999999999999 99999999999999999985 6666554433    333   45788999999999999999


Q ss_pred             HHHHHHH---cC-CccEEEECccCCCCCCC-ccCCCC--HHHHHHHHHHhhhHHHHHHHH--HHHhccCCCCceEEEEec
Q 022418           99 VDFTISK---HN-QLDIMYNNAGVACKTPR-SIVDLN--LEVFDQVMRINVRGVVAGIKH--STRVMIPRRSGCILCTAS  169 (297)
Q Consensus        99 ~~~~~~~---~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~g~iv~vss  169 (297)
                      ++++.++   +| ++|+||||||+.  ... .+.+.+  .++|++.+++|+.+++.++++  +.+.|.+++.|+||++||
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~--~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS  803 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIP--ENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP  803 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCC--CTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccc--cCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence            9999988   88 999999999987  444 678888  899999999999999999877  778887777789999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHH-HHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhcCCCC
Q 022418          170 VTGLLGGLAQHTYSVSKSAIIGLVKSMAA-ELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYSTGVLE  247 (297)
Q Consensus       170 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~-el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
                      ..+..+  .+..|++||++++.|++.++. ++++. |+||+|+||+++ |+|.....          ...... ...+  
T Consensus       804 ~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~----------~~~~~~-~~~p--  867 (1878)
T 2uv9_A          804 NHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANN----------LVAEGV-EKLG--  867 (1878)
T ss_dssp             CSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHH----------HTHHHH-HTTT--
T ss_pred             hhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccch----------hhHHHH-HhcC--
Confidence            999887  367999999999999987655 47766 999999999999 99865310          000111 1111  


Q ss_pred             CCCCCHHHHHHHHHHHhcCCC-CcccccEEEe--cCCcccc
Q 022418          248 GTHCEPNDIANAALYLASDDA-KYVSGHNLVV--DGGFTSF  285 (297)
Q Consensus       248 ~~~~~~~dia~~~~~l~~~~~-~~~tG~~i~v--dgG~~~~  285 (297)
                      -+.++|+|+|+.++||+++.. .++||+.+.+  |||+...
T Consensus       868 lr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          868 VRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             CCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             CCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            255699999999999999886 7999999987  5998754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=3.9e-33  Score=233.27  Aligned_cols=200  Identities=17%  Similarity=0.216  Sum_probs=170.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+||||++++++|+++  +|++++|+.+.+++..+++..  .++.+|++|++++++++++    ++++|++||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE----AGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH----HCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh----cCCCCEEEE
Confidence            68999999999999999999999  999999999888777766643  7889999999999998886    689999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHH
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVK  194 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  194 (297)
                      |||..  ...++.+.+.++|++.+++|+.+++.+++++    ++++.+++|++||..+..+.++...|+.+|++++.+++
T Consensus        73 ~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           73 AVGKA--GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             CCCCC--CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             CCCcC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            99986  4556777889999999999999999999988    23456899999999998888888999999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       195 ~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .++.++.++||++++++||+++|++....                    ..+.+++++|+|+|++++++++.+.
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~~--------------------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAPL--------------------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGGG--------------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCcccc--------------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999874311                    0122678999999999999998663

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=4.2e-31  Score=250.01  Aligned_cols=216  Identities=14%  Similarity=0.161  Sum_probs=177.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEE-eCCc-------------hhHHHHHHHh---CCCeeEEEecCCCHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIA-DIQH-------------QLGQQTAKEL---GPNATFIACDVTKES   93 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~-~r~~-------------~~~~~~~~~~---~~~v~~~~~D~s~~~   93 (297)
                      -++|++|||||++|||.+++++|+++|++ |+++ +|+.             +.+++..+++   +.++.++.||++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46899999999999999999999999998 6777 8883             3444444433   778999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccc
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTG  172 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~  172 (297)
                      ++.++++++. +++++|+||||||+.  ..+.+.+.+.++|++.+++|+.+++++.+++.+.+++++ .++||++||..+
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~--~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTV--DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCC--CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCC--CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            9999999998 789999999999988  566788999999999999999999999999999997765 789999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCC
Q 022418          173 LLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE  252 (297)
Q Consensus       173 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (297)
                      ..+.+++..|+++|++++.|+    .++.++||++++|+||+++|+|......       .    .......   -..++
T Consensus       406 ~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~-------~----~~~~~~g---~~~l~  467 (525)
T 3qp9_A          406 IWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGAT-------G----ERLRRLG---LRPLA  467 (525)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHH-------H----HHHHHTT---BCCBC
T ss_pred             cCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhh-------H----HHHHhcC---CCCCC
Confidence            999999999999999999874    5667789999999999999998742110       0    0111111   23578


Q ss_pred             HHHHHHHHHHHhcCCC
Q 022418          253 PNDIANAALYLASDDA  268 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~  268 (297)
                      |+++++.+.++++...
T Consensus       468 pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          468 PATALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999997663

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=2.8e-29  Score=270.61  Aligned_cols=237  Identities=18%  Similarity=0.205  Sum_probs=176.5

Q ss_pred             CCCCCEEEEEcCCCc-HHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHh---CCCeeEEEecCCCHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASG-IGKATAAKFISNGAKVVIADIQHQL-----GQQTAKEL---GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        31 ~~~~k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     +++..+++   +.++..+.+|++|++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998876     55666555   34678899999999999999999


Q ss_pred             HHH----HcCCccEEEECccC----CCCCCCccCCCCHH----HHHHHHHHhhhHHHHHHHHHHHhccCCCCc----eEE
Q 022418          102 TIS----KHNQLDIMYNNAGV----ACKTPRSIVDLNLE----VFDQVMRINVRGVVAGIKHSTRVMIPRRSG----CIL  165 (297)
Q Consensus       102 ~~~----~~g~id~li~~ag~----~~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g----~iv  165 (297)
                      +.+    ++|++|+||||||+    .. ......+.+.+    .++..+++|+.+++.+++++.+.|..++.+    .++
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~-~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFP-FAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEE-CCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCc-ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence            988    88999999999997    21 11111222222    345569999999999999999999765432    222


Q ss_pred             EEecccccccCCCCccchhhHHHHHHHHHHHHHH--HccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHh
Q 022418          166 CTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE--LCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYS  242 (297)
Q Consensus       166 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--l~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  242 (297)
                      ..++..+..  +...+|++||+|+++|+++++.|  +++ +|+||+++||+|+ |++....      +...    .....
T Consensus      2292 ~~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~------~~~~----~~~~~ 2358 (3089)
T 3zen_D         2292 PGSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN------DAIV----SAVEE 2358 (3089)
T ss_dssp             EECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT------TTTH----HHHGG
T ss_pred             ECCcccccC--CCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc------hhHH----HHHHh
Confidence            233332222  24468999999999999999999  665 6999999999999 6554321      0001    11111


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHhcCCCCcc-cccEEEec--CCccc
Q 022418          243 TGVLEGTHCEPNDIANAALYLASDDAKYV-SGHNLVVD--GGFTS  284 (297)
Q Consensus       243 ~~~~~~~~~~~~dia~~~~~l~~~~~~~~-tG~~i~vd--gG~~~  284 (297)
                       . . .+..+|+|+|++++||+++...++ +|+.+.+|  ||+..
T Consensus      2359 -~-~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2359 -A-G-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             -G-S-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             -c-C-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence             1 1 334499999999999999875554 45555555  99954

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=4.6e-28  Score=239.24  Aligned_cols=222  Identities=17%  Similarity=0.234  Sum_probs=177.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHH-HCCC-eEEEEeCC---chhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFI-SNGA-KVVIADIQ---HQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~-~~G~-~Vi~~~r~---~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      -.+|+++||||++|||++++++|+ ++|+ +|++++|+   .+..++..+++   +.++.++.||++|+++++++++++.
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            368999999999999999999999 7999 59999998   44455555444   6789999999999999999999988


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++ ++|+||||||+.  ....+.+.+.++|++.+++|+.+++++.+++.|.|      +||++||.++..+.+.+..|+
T Consensus       608 ~~~-~id~lVnnAGv~--~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~Ya  678 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVL--DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYA  678 (795)
T ss_dssp             TTS-CEEEEEECCCCC--CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHH
T ss_pred             HhC-CCEEEEECCCcC--CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHH
Confidence            776 999999999998  56778899999999999999999999999987766      799999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++|+    |++.++.+++++||++|+|+||++.|+++......        ..........   -..++++|..+.+..+
T Consensus       679 Aaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~--------~~~~~~~~~g---~~~l~~~e~~~~~~~~  743 (795)
T 3slk_A          679 AANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLRE--------AEQDRLARSG---LLPISTEEGLSQFDAA  743 (795)
T ss_dssp             HHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHH--------HHHHHHHHTT---BCCCCHHHHHHHHHHH
T ss_pred             HHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccH--------HHHHHHHhcC---CCCCCHHHHHHHHHHH
Confidence            9996    55666677777899999999999999876443211        1111111111   2346788888888877


Q ss_pred             hcCCCCcccccEEE
Q 022418          264 ASDDAKYVSGHNLV  277 (297)
Q Consensus       264 ~~~~~~~~tG~~i~  277 (297)
                      +..+...+....+.
T Consensus       744 l~~~~~~~~~~~~d  757 (795)
T 3slk_A          744 CGGAHTVVAPVRFS  757 (795)
T ss_dssp             HTSSCSSCCCCCBC
T ss_pred             HhCCCcEEEEEecC
Confidence            76654444433333

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=3e-28  Score=228.29  Aligned_cols=212  Identities=19%  Similarity=0.254  Sum_probs=169.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCch---hHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQ---LGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~---~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +|++|||||++|||++++++|+++|+ +|++++|+..   ..++..++   .+.++.++.||++|++++.++++++.++ 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 7889999642   33444333   4678999999999999999999998766 


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|+||||||+.. ....+.+.+.++|++.+++|+.+++++.+++.+.    ..++||++||..+..+.+++..|+++|
T Consensus       318 g~ld~vVh~AGv~~-~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 APLTAVFHSAGVAH-DDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             SCEEEEEECCCCCC-SCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             CCCeEEEECCcccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence            78999999999863 3456888999999999999999999999887653    467999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.+    ...||++++|+||++.++.+.....      ....+    ....   -..++|++.++.+..++..
T Consensus       393 a~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~------~~~~l----~~~g---~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          393 AYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPE------VHDRL----VRQG---VLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECEESSSCC------------CHHH----HHTT---EEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCcccCCccccChH------HHHHH----HhcC---CCCCCHHHHHHHHHHHHcC
Confidence            9999988754    4569999999999998765432110      00111    1110   1236899999999999876


Q ss_pred             CC
Q 022418          267 DA  268 (297)
Q Consensus       267 ~~  268 (297)
                      ..
T Consensus       456 ~~  457 (496)
T 3mje_A          456 DD  457 (496)
T ss_dssp             TC
T ss_pred             CC
Confidence            53

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=9.2e-28  Score=204.84  Aligned_cols=208  Identities=14%  Similarity=0.145  Sum_probs=160.6

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCe-eEEEecCCCHHHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNA-TFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v-~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .....+++||+++||||||+||++++++|+++|++|++++|+.+++++...   ..+ .++.+|++  +       .+.+
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~--~-------~~~~   80 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLE--E-------DFSH   80 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTT--S-------CCGG
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccH--H-------HHHH
Confidence            345578999999999999999999999999999999999999988776654   357 89999998  2       3333


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC---CCCcc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG---LAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~---~~~~~  181 (297)
                      .++++|+||||||...  .        +++++.+++|+.++.++++++..    .+.+++|++||..+..+.   ++...
T Consensus        81 ~~~~~D~vi~~ag~~~--~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~  146 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGP--H--------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMRH  146 (236)
T ss_dssp             GGTTCSEEEECCCCCT--T--------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGHH
T ss_pred             HHcCCCEEEECCCCCC--C--------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhhh
Confidence            4568999999999652  1        34788999999999999999855    345799999998776654   46679


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.+|++++.+++       ..|++++.++||++.|+.........              ........+++++|+|++++
T Consensus       147 Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~--------------~~~~~~~~~i~~~Dva~~~~  205 (236)
T 3e8x_A          147 YLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVS--------------PHFSEITRSITRHDVAKVIA  205 (236)
T ss_dssp             HHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEE--------------SSCSCCCCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEec--------------cCCCcccCcEeHHHHHHHHH
Confidence            9999999999876       47899999999999998643221100              01111267889999999999


Q ss_pred             HHhcCCCCcccccEEEecCCc
Q 022418          262 YLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ++++.+.  .+|+++++++|.
T Consensus       206 ~~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          206 ELVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HHTTCGG--GTTEEEEEEECS
T ss_pred             HHhcCcc--ccCCeEEEeCCC
Confidence            9997753  689999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=8.1e-27  Score=218.95  Aligned_cols=210  Identities=15%  Similarity=0.164  Sum_probs=167.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCch---hHHHHHH---HhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQ---LGQQTAK---ELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~---~~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      -.++++|||||+||||.+++++|+++|++ |++++|+..   ..++..+   ..+.++.++.||++|++++.++++.+ .
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            35789999999999999999999999995 999999874   2334333   33677899999999999999999988 5


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +++++|+||||||..  ....+.+.+.+++++.+++|+.+++++.+++.+    .+.+++|++||..+..+.+++..|++
T Consensus       303 ~~g~ld~VIh~AG~~--~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          303 DDVPLSAVFHAAATL--DDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TTSCEEEEEECCCCC--CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             hcCCCcEEEECCccC--CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            668999999999987  456678899999999999999999999988754    35689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc-hhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF-VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +|++++.|++.+    ...|+++++|+||+++++. ......            ... ..  ..-..++|+|+++.+..+
T Consensus       377 aka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~~------------~~~-~~--~g~~~i~~e~~a~~l~~~  437 (486)
T 2fr1_A          377 GNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPVA------------DRF-RR--HGVIEMPPETACRALQNA  437 (486)
T ss_dssp             HHHHHHHHHHHH----HHTTCCCEEEEECCBC------------------------C-TT--TTEECBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhHH------------HHH-Hh--cCCCCCCHHHHHHHHHHH
Confidence            999999887654    3469999999999999863 221100            000 00  002357999999999999


Q ss_pred             hcCC
Q 022418          264 ASDD  267 (297)
Q Consensus       264 ~~~~  267 (297)
                      +...
T Consensus       438 l~~~  441 (486)
T 2fr1_A          438 LDRA  441 (486)
T ss_dssp             HHTT
T ss_pred             HhCC
Confidence            9765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=8e-27  Score=202.87  Aligned_cols=195  Identities=17%  Similarity=0.199  Sum_probs=158.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||||+||||++++++|+++|++|++++|+..+..      +..+.++.+|++|++++.++++       ++|+|
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   68 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA-------GCDGI   68 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc-------CCCEE
Confidence            4689999999999999999999999999999999976543      4578999999999999988886       68999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc------------ccCCCCc
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL------------LGGLAQH  180 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~------------~~~~~~~  180 (297)
                      |||||..  .        .+.|++.+++|+.+++++++++.+    .+.+++|++||..+.            .+..+..
T Consensus        69 i~~Ag~~--~--------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~  134 (267)
T 3rft_A           69 VHLGGIS--V--------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARPDG  134 (267)
T ss_dssp             EECCSCC--S--------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred             EECCCCc--C--------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999974  1        134688999999999999999955    356899999998776            3345567


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|+.||++.+.+++.++.+   .|++++.|+||.+.++......           .           ..+++++|+++.+
T Consensus       135 ~Y~~sK~~~e~~~~~~a~~---~g~~~~~vr~~~v~~~~~~~~~-----------~-----------~~~~~~~d~a~~~  189 (267)
T 3rft_A          135 LYGVSKCFGENLARMYFDK---FGQETALVRIGSCTPEPNNYRM-----------L-----------STWFSHDDFVSLI  189 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCCEEEEEECBCSSSCCSTTH-----------H-----------HHBCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHH---hCCeEEEEEeecccCCCCCCCc-----------e-----------eeEEcHHHHHHHH
Confidence            8999999999999999888   4899999999999987543211           0           2356899999999


Q ss_pred             HHHhcCCCCcccccEEEecCC
Q 022418          261 LYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      ..++..+.  ..+.++.+.++
T Consensus       190 ~~~~~~~~--~~~~~~~~~s~  208 (267)
T 3rft_A          190 EAVFRAPV--LGCPVVWGASA  208 (267)
T ss_dssp             HHHHHCSC--CCSCEEEECCC
T ss_pred             HHHHhCCC--CCceEEEEeCC
Confidence            99987652  23345555443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=4.7e-26  Score=214.69  Aligned_cols=207  Identities=21%  Similarity=0.275  Sum_probs=168.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCch---hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQ---LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~---~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      -.+|++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++   +.++.++.||++|++++.++++.   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            3579999999999999999999999999 5999999863   334444433   56789999999999999998886   


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                        +++|+||||||+.  ....+.+.+.+++++.+++|+.+++++.+++.+.   .+.++||++||..+..+.+++..|++
T Consensus       334 --~~ld~VVh~AGv~--~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 --YPPNAVFHTAGIL--DDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             --SCCSEEEECCCCC--CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             --CCCcEEEECCccc--CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHH
Confidence              6899999999987  5556788999999999999999999998876432   14689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCc-cCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAI-PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +|++++.|++.+    ...|+++++|+||++ +|+|.......        ..   . ...   -..++|+|+++.+..+
T Consensus       407 aKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~--------~~---~-~~g---~~~l~~e~~a~~l~~a  467 (511)
T 2z5l_A          407 ANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEE--------SL---S-RRG---LRAMDPDAAVDALLGA  467 (511)
T ss_dssp             HHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHH--------HH---H-HHT---BCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHH--------HH---H-hcC---CCCCCHHHHHHHHHHH
Confidence            999999998865    346999999999999 77776432110        00   0 111   2457999999999999


Q ss_pred             hcCC
Q 022418          264 ASDD  267 (297)
Q Consensus       264 ~~~~  267 (297)
                      +..+
T Consensus       468 l~~~  471 (511)
T 2z5l_A          468 MGRN  471 (511)
T ss_dssp             HHHT
T ss_pred             HhCC
Confidence            8755

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=6.2e-27  Score=209.95  Aligned_cols=239  Identities=16%  Similarity=0.123  Sum_probs=172.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+    +..+.++.+|++|++++.++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            5689999999999999999999999999999999876554443332    56789999999999999998875     47


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------cCC
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GGL  177 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~~~  177 (297)
                      +|+||||||...  .    ....+...+.+++|+.++..+++++..    .+.+++|++||.....           +..
T Consensus        79 ~d~vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKA--V----GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCC--H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECccccc--c----CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            999999999752  1    123445668899999999998887654    4457999999966541           222


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC---CCHHHHHHHHHh------------
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG---VDASRLLELVYS------------  242 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~------------  242 (297)
                      +...|+.+|++.|.+++.++.++.  +++++.++|+.++++.....+......   ..-..+.....+            
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            346899999999999999998853  599999999999987432110000000   000111111111            


Q ss_pred             ---cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          243 ---TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       243 ---~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                         .......+++++|+|++++.+++.......|+++++++|......+
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  275 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLE  275 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHH
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHH
Confidence               1111245788999999999998652223478999999998765443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.94  E-value=1.2e-26  Score=206.34  Aligned_cols=223  Identities=18%  Similarity=0.113  Sum_probs=168.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..+.|++|||||+|+||++++++|+++|++|++++|+.+. +.    +  .+.++.+|++|++++.++++.     +++|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~-----~~~d   76 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISD-----IKPD   76 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHH-----HCCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHh-----cCCC
Confidence            4567899999999999999999999999999999998764 21    2  678899999999999988875     2799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------------CC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------------GL  177 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------------~~  177 (297)
                      +|||+||...  .    +.+.+++++.+++|+.++..+++++ +.+  .+.+++|++||.....+             ..
T Consensus        77 ~vih~A~~~~--~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~  147 (321)
T 2pk3_A           77 YIFHLAAKSS--V----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLR  147 (321)
T ss_dssp             EEEECCSCCC--H----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred             EEEEcCcccc--h----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence            9999999652  1    1223457889999999999999999 544  24579999999865432             24


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHH---h---------c
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVY---S---------T  243 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~---~---------~  243 (297)
                      +...|+.+|++.|.+++.++.+   .|++++.++||.++++....  ....        .......   +         .
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~g~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~  216 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKA---YGMDIIHTRTFNHIGPGQSLGFVTQD--------FAKQIVDIEMEKQEPIIKVGN  216 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCTTSHHHH--------HHHHHHHHHTTSSCSEEEESC
T ss_pred             CCCccHHHHHHHHHHHHHHHHH---cCCCEEEEEeCcccCcCCCCCchHHH--------HHHHHHHHhcCCCCCeEEeCC
Confidence            5678999999999999999887   48999999999999986542  1111        1111111   1         1


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ......+++++|+|++++++++..   .+|+++++++|......+
T Consensus       217 ~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~~e  258 (321)
T 2pk3_A          217 LEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTRIQD  258 (321)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEEHHH
T ss_pred             CCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCeeHHH
Confidence            112245789999999999999765   478999999997655433

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=1.6e-25  Score=201.73  Aligned_cols=221  Identities=14%  Similarity=0.068  Sum_probs=173.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISN-GA-KVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~-G~-~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++|++|||||+|+||++++++|+++ |+ +|++++|+..+.+...+.+ ...+.++.+|++|.+++.++++      
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE------   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh------
Confidence            4488999999999999999999999999 98 9999999988777766655 3578999999999998887765      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                       ++|+|||+||...  .    ......+.+.+++|+.++.++++++.+.    +.+++|++||..+..+   ...|+.+|
T Consensus        91 -~~D~Vih~Aa~~~--~----~~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~sK  156 (344)
T 2gn4_A           91 -GVDICIHAAALKH--V----PIAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGATK  156 (344)
T ss_dssp             -TCSEEEECCCCCC--H----HHHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHHHH
T ss_pred             -cCCEEEECCCCCC--C----CchhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHHHH
Confidence             6899999999752  1    1123446789999999999999999874    4578999999776543   46899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------CCCCCCCCCHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------GVLEGTHCEPNDIANA  259 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dia~~  259 (297)
                      ++.|.+++.++.++.+.|+++++++||.+.++... ..+.        .......+.       ....+.+++++|+|++
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i~~--------~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~  227 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VVPF--------FKKLVQNKASEIPITDIRMTRFWITLDEGVSF  227 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HHHH--------HHHHHHHTCCCEEESCTTCEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HHHH--------HHHHHHcCCCceEEeCCCeEEeeEEHHHHHHH
Confidence            99999999999888888999999999999997532 1110        001111111       1112447899999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCc
Q 022418          260 ALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ++.+++..   ..|++++++++.
T Consensus       228 v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          228 VLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHHC---CSSCEEEECCCE
T ss_pred             HHHHHhhc---cCCCEEecCCCc
Confidence            99999764   368889888774

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=4.3e-26  Score=204.72  Aligned_cols=227  Identities=16%  Similarity=0.122  Sum_probs=167.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+  ..++.++.+|++|++++.++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            6899999999999999999999999999999853 2222222222  245888999999999999888763     6999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------------
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------------  174 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------------  174 (297)
                      |||+||...      .+.+.+++++.+++|+.++..+++++.+...   .+++|++||.....                 
T Consensus        77 vih~A~~~~------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVA------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCC------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccC------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            999999651      1234567889999999999999999988653   26899999976432                 


Q ss_pred             ----------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-
Q 022418          175 ----------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-  243 (297)
Q Consensus       175 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  243 (297)
                                +..+...|+.+|++.|.+++.++.++   |++++.++||.+++++.......   ............+. 
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~  221 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQ---GWVGWFCQKAVEIKN  221 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTB---CHHHHHHHHHHHHHT
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcC---cHHHHHHHHHHhCcc
Confidence                      12345689999999999999998884   89999999999999864211000   00001111111111 


Q ss_pred             -----------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          244 -----------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       244 -----------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                                 ......+++++|+|++++++++. ....+|++++++||.
T Consensus       222 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          222 GINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             TCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             cCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence                       01112478999999999999964 234689999999996

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=9.6e-27  Score=208.27  Aligned_cols=228  Identities=16%  Similarity=0.111  Sum_probs=161.8

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +..+.++++|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+ .++.++.+|++|++++.++++..   
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhc---
Confidence            34567899999999999999999999999999999999999764332111122 46888999999999999888865   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----C---
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----L---  177 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----~---  177 (297)
                        ++|+||||||...  ..     +.++++  +++|+.++..+++++..    .+.+++|++||.....+.     +   
T Consensus        88 --~~D~vih~A~~~~--~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E  152 (330)
T 2pzm_A           88 --KPTHVVHSAAAYK--DP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDS  152 (330)
T ss_dssp             --CCSEEEECCCCCS--CT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred             --CCCEEEECCccCC--Cc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCC
Confidence              7999999999762  11     345555  99999999999999875    245799999998764332     2   


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHHccCCcE-EEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCH
Q 022418          178 ---AQHTYSVSKSAIIGLVKSMAAELCEYGIR-INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       178 ---~~~~Y~~sK~a~~~~~~~la~el~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                         +...|+.+|++.|.+++.+  ++....+| ++.+.||. .+++..........+.       ....... ...++++
T Consensus       153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~i~~  221 (330)
T 2pzm_A          153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ-------KCFCSDT-VRDFLDM  221 (330)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC-------CCCEESC-EECEEEH
T ss_pred             CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC-------EEeCCCC-EecceeH
Confidence               5678999999999999876  33333344 44445553 3333222221111000       0001111 2568899


Q ss_pred             HHHHH-HHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          254 NDIAN-AALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       254 ~dia~-~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +|+|+ +++++++...    |+++++++|......
T Consensus       222 ~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s~~  252 (330)
T 2pzm_A          222 SDFLAIADLSLQEGRP----TGVFNVSTGEGHSIK  252 (330)
T ss_dssp             HHHHHHHHHHTSTTCC----CEEEEESCSCCEEHH
T ss_pred             HHHHHHHHHHHhhcCC----CCEEEeCCCCCCCHH
Confidence            99999 9999997642    899999999765543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=4.6e-27  Score=210.42  Aligned_cols=223  Identities=17%  Similarity=0.110  Sum_probs=166.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCch--hHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQ--LGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~--~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++|++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++  ..++.++.+|++|++++.+++.      
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh------
Confidence            35789999999999999999999997  89999998642  11111 112  3468899999999999888772      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------c
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------G  175 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~  175 (297)
                       ++|+|||+||...      .+.+.+++++.+++|+.++.++++++.+.   ...+++|++||.....           +
T Consensus        75 -~~d~vih~A~~~~------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           75 -KVDGVVHLAAESH------VDRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             -TCSEEEECCCCCC------HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             -CCCEEEECCCCcC------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence             7999999999652      12344567889999999999999999886   1237999999975321           2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhc-------CCC
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYST-------GVL  246 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~  246 (297)
                      ..+...|+.+|++.|.+++.++.+   .|++++.++||.++++....  ...        ........+.       ...
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  213 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRT---YNLNASITRCTNNYGPYQFPEKLIP--------KTIIRASLGLKIPIYGTGKN  213 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEEECEEESTTCCTTSHHH--------HHHHHHHTTCCEEEETC---
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEeeeeeeCcCCCcCchHH--------HHHHHHHcCCCceEeCCCCc
Confidence            345678999999999999999887   58999999999999987421  111        1111111111       112


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .+.+++++|+|++++++++..   .+|+++++++|.....
T Consensus       214 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s~  250 (336)
T 2hun_A          214 VRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEKTN  250 (336)
T ss_dssp             CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEECH
T ss_pred             eeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCcccH
Confidence            246789999999999999754   3799999999976543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=5e-26  Score=203.79  Aligned_cols=227  Identities=14%  Similarity=0.084  Sum_probs=167.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEE-EecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFI-ACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~-~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.+..+...+.+    +.++.++ .+|++|++++.++++    
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT----
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc----
Confidence            4578899999999999999999999999999999999887665544332    3568888 799999988877664    


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cC-------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GG-------  176 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~-------  176 (297)
                         ++|+|||+||...  ..       +++.+.+++|+.++..+++++.+.   .+.+++|++||..+.. +.       
T Consensus        83 ---~~d~vih~A~~~~--~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~  147 (342)
T 1y1p_A           83 ---GAAGVAHIASVVS--FS-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             ---TCSEEEECCCCCS--CC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             ---CCCEEEEeCCCCC--CC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCcc
Confidence               6899999999762  11       235779999999999999998752   2457999999987652 11       


Q ss_pred             -----------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCH
Q 022418          177 -----------------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDA  233 (297)
Q Consensus       177 -----------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~  233 (297)
                                             .+...|+.+|++.|.+++.++.++.. ++++++++||.+++++.......   ....
T Consensus       148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~---~~~~  223 (342)
T 1y1p_A          148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQS---GSTS  223 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCC---CHHH
T ss_pred             cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCC---ccHH
Confidence                                   12357999999999999999999865 89999999999999865321000   0000


Q ss_pred             HHHHHHH-------HhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          234 SRLLELV-------YSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       234 ~~~~~~~-------~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      .......       .... ..+.+++++|+|++++.++...  ..+|+.+..+|+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~  276 (342)
T 1y1p_A          224 GWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT  276 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred             HHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence            0011110       1111 2356899999999999998653  3567766666653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=3.1e-26  Score=195.84  Aligned_cols=199  Identities=14%  Similarity=0.124  Sum_probs=151.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++|+++||||+|+||++++++|+++|+  +|++++|+.+.++...   ...+.++.+|++|++++.++++       +
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~-------~   84 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---YKNVNQEVVDFEKLDDYASAFQ-------G   84 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---GGGCEEEECCGGGGGGGGGGGS-------S
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---cCCceEEecCcCCHHHHHHHhc-------C
Confidence            36789999999999999999999999999  9999999876543221   1357889999999988877664       7


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +|+||||||...         ...++++.+++|+.++..+++++.+    .+.+++|++||..+..+  +...|+.+|++
T Consensus        85 ~d~vi~~ag~~~---------~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~~--~~~~Y~~sK~~  149 (242)
T 2bka_A           85 HDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKGE  149 (242)
T ss_dssp             CSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             CCEEEECCCccc---------ccCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCCC--CcchHHHHHHH
Confidence            899999999651         1245788999999999999888754    34579999999877643  34689999999


Q ss_pred             HHHHHHHHHHHHccCCc-EEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHHh
Q 022418          189 IIGLVKSMAAELCEYGI-RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGV---LEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dia~~~~~l~  264 (297)
                      ++.+++.+       ++ ++++|+||+++|++......        +..........+   ..+++++++|+|+++++++
T Consensus       150 ~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  214 (242)
T 2bka_A          150 VEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG--------EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNV  214 (242)
T ss_dssp             HHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH--------HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred             HHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH--------HHHHHHhhcccCccccCCcccCHHHHHHHHHHHH
Confidence            99988753       45 79999999999986532110        111111111111   0256789999999999999


Q ss_pred             cCCCC
Q 022418          265 SDDAK  269 (297)
Q Consensus       265 ~~~~~  269 (297)
                      +++..
T Consensus       215 ~~~~~  219 (242)
T 2bka_A          215 VRPRD  219 (242)
T ss_dssp             TSCCC
T ss_pred             hCccc
Confidence            87643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.93  E-value=3.6e-27  Score=213.11  Aligned_cols=226  Identities=17%  Similarity=0.120  Sum_probs=169.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCch--hHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVIADIQHQ--LGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~--~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |++|||||+|+||++++++|+++ |++|++++|+..  ..+.. .++  +.++.++.+|++|++++.+++++.     ++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            46999999999999999999998 799999998652  22221 112  346889999999999999888753     79


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-----CceEEEEecccccc----------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-----SGCILCTASVTGLL----------  174 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~g~iv~vss~~~~~----------  174 (297)
                      |+|||+||...      .+.+.+++++.+++|+.++.++++++.+.|...+     .+++|++||.....          
T Consensus        75 d~vih~A~~~~------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           75 DAVMHLAAESH------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             SEEEECCSCCC------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CEEEECCCCcC------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence            99999999652      1234566788999999999999999999864321     25999999965321          


Q ss_pred             -----------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHH
Q 022418          175 -----------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVY  241 (297)
Q Consensus       175 -----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~  241 (297)
                                 +..+...|+.+|++.|.+++.++.++   |++++.++||.+++++...  ...        ........
T Consensus       149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~--------~~~~~~~~  217 (361)
T 1kew_A          149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIP--------LVILNALE  217 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHH--------HHHHHHHH
T ss_pred             cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHH--------HHHHHHHc
Confidence                       12355789999999999999998884   7999999999999987531  111        11111111


Q ss_pred             hc-------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          242 ST-------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       242 ~~-------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +.       ....+.+++++|+|++++++++..   .+|+++++++|.....
T Consensus       218 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  266 (361)
T 1kew_A          218 GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             CCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeeeH
Confidence            11       112245789999999999999754   4799999999986543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=2.3e-26  Score=206.18  Aligned_cols=231  Identities=19%  Similarity=0.119  Sum_probs=165.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ-QTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+ ...+.+  ..++.++.+|++|++++.++++..     ++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QP   76 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999999999999999876532 122333  246888999999999999988876     78


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-----------ccCCC
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-----------LGGLA  178 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-----------~~~~~  178 (297)
                      |+||||||...      .+.+.+++++.+++|+.++.++++++.+. .  ..+++|++||....           .+..+
T Consensus        77 d~vih~A~~~~------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~  147 (345)
T 2z1m_A           77 DEVYNLAAQSF------VGVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEMFGKVQEIPQTEKTPFYP  147 (345)
T ss_dssp             SEEEECCCCCC------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCcc------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhhcCCCCCCCCCccCCCCC
Confidence            99999999651      11233567889999999999999999863 1  13789999998542           23345


Q ss_pred             CccchhhHHHHHHHHHHHHHHHc---cCCcEEEEEeCCCccCcchhhHHH---HhhcCCCHHHHHHHHHhcCCCCCCCCC
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELC---EYGIRINCISPFAIPTPFVMEEMS---QIYAGVDASRLLELVYSTGVLEGTHCE  252 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~---~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (297)
                      ...|+.+|++.|.+++.++.++.   ..++.++.+.||...|.+......   +...+...    ....+.....+.+++
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  223 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQD----KLVLGNLNAKRDWGY  223 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCS----CEEESCTTCEECCEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCC----eeeeCCCCceeeeEE
Confidence            67899999999999999998865   334567777888887765432111   00000000    000011112235899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          253 PNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++|+|++++++++...    ++.+++.+|....
T Consensus       224 v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s  252 (345)
T 2z1m_A          224 APEYVEAMWLMMQQPE----PDDYVIATGETHT  252 (345)
T ss_dssp             HHHHHHHHHHHHTSSS----CCCEEECCSCCEE
T ss_pred             HHHHHHHHHHHHhCCC----CceEEEeCCCCcc
Confidence            9999999999997652    4678887776544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=2.1e-26  Score=207.67  Aligned_cols=235  Identities=17%  Similarity=0.098  Sum_probs=172.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKEL----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~----~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++++|+++||||+|+||++++++|+++|++|++++|+..    .++...+.+    ..++.++.+|++|++++.++++ 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence            4577899999999999999999999999999999999764    233333322    2578899999999998887776 


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----  176 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----  176 (297)
                            ++|+|||+||...  .    ..+.+++++.+++|+.++..+++++.+.    +.+++|++||.....+.     
T Consensus       102 ------~~d~vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 ------GVDYVLHQAALGS--V----PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             ------TCSEEEECCSCCC--H----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCcccC--c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCCCC
Confidence                  6899999999652  1    1245678899999999999999998762    45789999998765432     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC------
Q 022418          177 ------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG------  244 (297)
Q Consensus       177 ------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  244 (297)
                            .+...|+.+|++.|.+++.++.++   |++++.++||.++++.......  ..............+..      
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~  240 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGA--YAAVIPKWTSSMIQGDDVYINGD  240 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCST--TCCHHHHHHHHHHHTCCCEEESS
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcc--hhhHHHHHHHHHHCCCCcEEeCC
Confidence                  245689999999999999998874   7999999999999986431100  00000111111111111      


Q ss_pred             -CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          245 -VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       245 -~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                       .....+++++|+|++++.++... ....|+++++++|......
T Consensus       241 g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~~  283 (352)
T 1sb8_A          241 GETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTSLN  283 (352)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEHH
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCccHH
Confidence             11236789999999999988653 3457899999988765443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=1.4e-24  Score=196.09  Aligned_cols=229  Identities=13%  Similarity=0.007  Sum_probs=171.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+......+.+  ..++.++.+|++|++++.++++..     +
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   80 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----Q   80 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----C
Confidence            367899999999999999999999999999999999876554444332  357889999999999999988865     7


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc------------cC
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL------------GG  176 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~------------~~  176 (297)
                      +|+|||+||..      ..+.+.+++++.+++|+.++..+++++.+.   ...+++|++||.....            +.
T Consensus        81 ~d~vih~A~~~------~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           81 PEIVFHMAAQP------LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             CSEEEECCSCC------CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             CCEEEECCCCc------ccccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence            99999999953      222345678899999999999999999773   2257899999976321            23


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHc------cCCcEEEEEeCCCccCcchh---hHHHHhhcCCCHHHHHHHHHhc----
Q 022418          177 LAQHTYSVSKSAIIGLVKSMAAELC------EYGIRINCISPFAIPTPFVM---EEMSQIYAGVDASRLLELVYST----  243 (297)
Q Consensus       177 ~~~~~Y~~sK~a~~~~~~~la~el~------~~~i~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~----  243 (297)
                      .+...|+.+|.+.|.+++.++.++.      +.|++++.++||.++++...   .....        .......+.    
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~--------~~~~~~~g~~~~~  223 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPD--------ILRAFEQSQPVII  223 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHH--------HHHHHHTTCCEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHH--------HHHHHhcCCCEEE
Confidence            3567899999999999999999874      45899999999999998542   11111        111111111    


Q ss_pred             --CCCCCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCC
Q 022418          244 --GVLEGTHCEPNDIANAALYLASDD--AKYVSGHNLVVDGG  281 (297)
Q Consensus       244 --~~~~~~~~~~~dia~~~~~l~~~~--~~~~tG~~i~vdgG  281 (297)
                        ......+++++|+|++++.++...  .....|+++++.+|
T Consensus       224 ~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          224 RNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             SCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence              111245789999999999988631  11235788999874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.93  E-value=1.6e-25  Score=198.47  Aligned_cols=223  Identities=15%  Similarity=0.106  Sum_probs=163.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++|||||+|+||++++++|+++|++|++++|......   +.+...+.++.+|++|++++.++++..     ++|++||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKGVPFFRVDLRDKEGVERAFREF-----RPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            47999999999999999999999999999998543211   112245778899999999998888753     7899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-------------CCCcc
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-------------LAQHT  181 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-------------~~~~~  181 (297)
                      +|+...      ...+.+++.+.+++|+.++..+++++..    .+.+++|++||.++.++.             .+...
T Consensus        73 ~a~~~~------~~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~  142 (311)
T 2p5y_A           73 QAAQAS------VKVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSP  142 (311)
T ss_dssp             CCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSH
T ss_pred             CccccC------chhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCCh
Confidence            998651      1234567888999999999999999865    345789999997332221             24568


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH-HHhhcCCCHHHHHHHHHh------------cCCCCC
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM-SQIYAGVDASRLLELVYS------------TGVLEG  248 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~  248 (297)
                      |+.+|++.|.+++.++.+   .|++++.++||.+++|...... ...    ..........+            .....+
T Consensus       143 Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  215 (311)
T 2p5y_A          143 YAASKAAFEHYLSVYGQS---YGLKWVSLRYGNVYGPRQDPHGEAGV----VAIFAERVLKGLPVTLYARKTPGDEGCVR  215 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCSSSTTHH----HHHHHHHHHHTCCEEEECSSSTTSCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeccccCcCCCCCCcCcH----HHHHHHHHHcCCCcEEEecccCCCCCeEE
Confidence            999999999999999887   4899999999999998642110 000    00001111111            111224


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      .+++++|+|++++++++..     |+.+++++|......
T Consensus       216 ~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s~~  249 (311)
T 2p5y_A          216 DYVYVGDVAEAHALALFSL-----EGIYNVGTGEGHTTR  249 (311)
T ss_dssp             CEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCEEHH
T ss_pred             eeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCccHH
Confidence            6789999999999998653     789999998765433

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=3.6e-25  Score=189.78  Aligned_cols=226  Identities=12%  Similarity=0.048  Sum_probs=163.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++|+++||||+|+||++++++|+++  |++|++++|+.++.+.    +...+.++.+|++|++++.++++       ++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~-------~~   70 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQ-------GI   70 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----cCCCeeEEEecCCCHHHHHHHHc-------CC
Confidence            45789999999999999999999999  8999999998765543    24568889999999999888775       58


Q ss_pred             cEEEECccCCCCCCC-------ccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc-
Q 022418          110 DIMYNNAGVACKTPR-------SIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-  181 (297)
Q Consensus       110 d~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~-  181 (297)
                      |++|||||.......       ...+..++++.+.+++|+.++..+++++.+.    +.+++|++||..+..+..+... 
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~  146 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKL  146 (253)
T ss_dssp             SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCccccc
Confidence            999999997531100       0112233455678899999999999988653    3578999999887654444434 


Q ss_pred             ----chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          182 ----YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       182 ----Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                          |+.+|.+++.+++.       .|++++.++||.++++.....  .........     ...   ...++++++|+|
T Consensus       147 ~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~--~~~~~~~~~-----~~~---~~~~~~~~~Dva  209 (253)
T 1xq6_A          147 GNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVR--ELLVGKDDE-----LLQ---TDTKTVPRADVA  209 (253)
T ss_dssp             GGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSS--CEEEESTTG-----GGG---SSCCEEEHHHHH
T ss_pred             cchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchh--hhhccCCcC-----CcC---CCCcEEcHHHHH
Confidence                55699999887652       689999999999999854210  000100000     001   125678999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCc---ccccCCCCC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGF---TSFKNLKLP  291 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~---~~~~~~~~~  291 (297)
                      ++++++++.+.  .+|+++++++|.   .....+...
T Consensus       210 ~~~~~~~~~~~--~~g~~~~i~~~~~~~~~s~~e~~~  244 (253)
T 1xq6_A          210 EVCIQALLFEE--AKNKAFDLGSKPEGTSTPTKDFKA  244 (253)
T ss_dssp             HHHHHHTTCGG--GTTEEEEEEECCTTTSCCCCCHHH
T ss_pred             HHHHHHHcCcc--ccCCEEEecCCCcCCCCCHHHHHH
Confidence            99999997642  479999999864   354444433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=1.5e-24  Score=183.05  Aligned_cols=194  Identities=9%  Similarity=0.052  Sum_probs=146.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHH-HCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFI-SNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~-~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||+|+||++++++|+ ++|++|++++|+.+ ++++.. .....+.++.+|++|++++.++++       ++|+|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-------NAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-------CCCEE
Confidence            789999999999999999999 89999999999987 666554 234678999999999999988876       68999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc----------cc
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH----------TY  182 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~----------~Y  182 (297)
                      |||+|..                     |+.     .+.+++.+++.+.+++|++||..+..+.+...          .|
T Consensus        78 v~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y  131 (221)
T 3r6d_A           78 FVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISY  131 (221)
T ss_dssp             EESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHH
T ss_pred             EEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHH
Confidence            9999842                     222     56667777666778999999988776544333          79


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.+|.+++.+++.       .|++++.|+||++.++.........             ....+..+.+++++|+|+++++
T Consensus       132 ~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~-------------~~~~~~~~~~~~~~dvA~~~~~  191 (221)
T 3r6d_A          132 VQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELI-------------PEGAQFNDAQVSREAVVKAIFD  191 (221)
T ss_dssp             HHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEE-------------CTTSCCCCCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeec-------------cCCccCCCceeeHHHHHHHHHH
Confidence            9999999887653       6899999999999987321111000             0011222457899999999999


Q ss_pred             Hh--cCCCCcccccEEEecCCcc
Q 022418          263 LA--SDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       263 l~--~~~~~~~tG~~i~vdgG~~  283 (297)
                      ++  +++..+++ +.+.+++..+
T Consensus       192 l~~~~~~~~~~~-~~~~i~~~~~  213 (221)
T 3r6d_A          192 ILHAADETPFHR-TSIGVGEPGT  213 (221)
T ss_dssp             HHTCSCCGGGTT-EEEEEECTTC
T ss_pred             HHHhcChhhhhc-ceeeecCCCC
Confidence            99  88766665 5555555444

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=5.2e-26  Score=204.46  Aligned_cols=232  Identities=13%  Similarity=0.074  Sum_probs=163.6

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchh-HHHHHHHh--CCCeeEEEecCCCHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQL-GQQTAKEL--GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~-~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ...+..++|++|||||||+||++++++|+++|  ++|++.+|.... .....+..  ..++.++.+|++|++++.++++.
T Consensus        17 n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           17 NLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            34456888999999999999999999999999  678888776421 11111111  25789999999999999999886


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----  176 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----  176 (297)
                      .     ++|+|||+||...  .    +.+.+++++.+++|+.++..+++++.+.    +..++|++||.......     
T Consensus        97 ~-----~~d~Vih~A~~~~--~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~  161 (346)
T 4egb_A           97 R-----DVQVIVNFAAESH--V----DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGR  161 (346)
T ss_dssp             H-----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCC
T ss_pred             c-----CCCEEEECCcccc--h----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCC
Confidence            4     6999999999762  1    2345677889999999999999998763    45689999997544322     


Q ss_pred             -------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhc----
Q 022418          177 -------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYST----  243 (297)
Q Consensus       177 -------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~----  243 (297)
                             .+...|+.+|.+.|.+++.++.+   .|++++.++|+.++++....  ...        ........+.    
T Consensus       162 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~  230 (346)
T 4egb_A          162 FTEETPLAPNSPYSSSKASADMIALAYYKT---YQLPVIVTRCSNNYGPYQYPEKLIP--------LMVTNALEGKKLPL  230 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHHH--------HHHHHHHTTCCCEE
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeecceeCcCCCccchHH--------HHHHHHHcCCCcee
Confidence                   13468999999999999999887   48999999999999985421  111        1111111111    


Q ss_pred             ---CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          244 ---GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       244 ---~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                         ......+++++|+|++++.++....   +|+++++.+|......
T Consensus       231 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s~~  274 (346)
T 4egb_A          231 YGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKTNV  274 (346)
T ss_dssp             ETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEEHH
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCceeHH
Confidence               1122356789999999999997653   7999999999865543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.92  E-value=8.8e-26  Score=203.34  Aligned_cols=235  Identities=17%  Similarity=0.123  Sum_probs=172.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--------CCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--------PNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--------~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+..........+.        .++.++.+|++|++++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            45788999999999999999999999999999999997654333332221        578999999999998887776 


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----  176 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----  176 (297)
                            ++|+|||+||...      ...+.+++...+++|+.++..+++++...    +..++|++||.......     
T Consensus       100 ------~~d~Vih~A~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~  163 (351)
T 3ruf_A          100 ------GVDHVLHQAALGS------VPRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPALPK  163 (351)
T ss_dssp             ------TCSEEEECCCCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCccCC------cchhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCCCC
Confidence                  6899999999651      12345667889999999999999998663    34689999997654322     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------
Q 022418          177 ------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------  243 (297)
Q Consensus       177 ------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------  243 (297)
                            .+...|+.+|.+.|.+++.++.+   .|++++.++|+.++++.......  ........+.....+.       
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~  238 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYART---YGFKTIGLRYFNVFGRRQDPNGA--YAAVIPKWTAAMLKGDDVYINGD  238 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEECSEESTTCCCCST--TCCHHHHHHHHHHHTCCCEEESS
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeeCceeCcCCCCCcc--hhhHHHHHHHHHHcCCCcEEeCC
Confidence                  23468999999999999999887   48999999999999975421100  0000011111111111       


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ......+++++|+|++++.++... ....|+++++.+|......
T Consensus       239 g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~~  281 (351)
T 3ruf_A          239 GETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTTLN  281 (351)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEHH
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcccHH
Confidence            112245789999999999998763 3457999999988765543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=7.2e-26  Score=203.59  Aligned_cols=220  Identities=14%  Similarity=0.122  Sum_probs=164.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchh-HHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISN--GAKVVIADIQHQL-GQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~-~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+|+||++++++|+++  |++|++++|+... ..+...++ +.++.++.+|++|++++.++++       .+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            68999999999999999999999  8999999996531 11111222 3578899999999998887776       469


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc----------------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL----------------  174 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~----------------  174 (297)
                      +|||+||...      .+.+.+++++.+++|+.++..+++++.+.    + +++|++||.....                
T Consensus        78 ~vih~A~~~~------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           78 AIVHYAAESH------NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             EEEECCSCCC------HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             EEEECCcccC------ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccC
Confidence            9999999652      12334567889999999999999999875    2 4899999975331                


Q ss_pred             -------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhc--
Q 022418          175 -------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYST--  243 (297)
Q Consensus       175 -------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~--  243 (297)
                             +..+...|+.+|++.|.+++.++.++   |++++.++||.++++....  ...        ........+.  
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~  215 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIP--------RQITNILAGIKP  215 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHH--------HHHHHHHHTCCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHH--------HHHHHHHcCCCc
Confidence                   22345689999999999999998874   8999999999999986531  111        1111111111  


Q ss_pred             -----CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          244 -----GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       244 -----~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                           ......+++++|+|++++++++..   .+|+++++++|.....
T Consensus       216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~  260 (348)
T 1oc2_A          216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKNN  260 (348)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEEH
T ss_pred             eEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCCH
Confidence                 112246789999999999999754   3799999999875543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=5.2e-25  Score=185.61  Aligned_cols=196  Identities=14%  Similarity=0.162  Sum_probs=157.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.+..+..     ..+.++.+|++| ++++.++++       ++|+||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi   68 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLH-------GMDAII   68 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTT-------TCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHc-------CCCEEE
Confidence            4799999999999999999999999999999998754432     568999999999 888877765       689999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC-------CccchhhH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-------QHTYSVSK  186 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~-------~~~Y~~sK  186 (297)
                      ||||...              .+.+++|+.++..+++++..    .+.+++|++||..+..+.+.       ...|+.+|
T Consensus        69 ~~ag~~~--------------~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK  130 (219)
T 3dqp_A           69 NVSGSGG--------------KSLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAK  130 (219)
T ss_dssp             ECCCCTT--------------SSCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHH
T ss_pred             ECCcCCC--------------CCcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHHH
Confidence            9999762              12677899999999988854    34579999999887766554       67899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      .+.|.+++      ...|++++.++||.+.++.......                 .......+++++|+|++++++++.
T Consensus       131 ~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~-----------------~~~~~~~~i~~~Dva~~i~~~l~~  187 (219)
T 3dqp_A          131 HFADLYLT------KETNLDYTIIQPGALTEEEATGLID-----------------INDEVSASNTIGDVADTIKELVMT  187 (219)
T ss_dssp             HHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE-----------------ESSSCCCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHH------hccCCcEEEEeCceEecCCCCCccc-----------------cCCCcCCcccHHHHHHHHHHHHhC
Confidence            99999886      3478999999999999975432110                 002236789999999999999977


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.  ..|+++++++|....
T Consensus       188 ~~--~~g~~~~i~~g~~~~  204 (219)
T 3dqp_A          188 DH--SIGKVISMHNGKTAI  204 (219)
T ss_dssp             GG--GTTEEEEEEECSEEH
T ss_pred             cc--ccCcEEEeCCCCccH
Confidence            53  459999998886444

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.92  E-value=2.7e-25  Score=199.89  Aligned_cols=230  Identities=13%  Similarity=0.062  Sum_probs=162.3

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +....+.++|+||||||+|+||++++++|+++|++|++++|+.+.         ..+.++.+|++|.+++.++++     
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~~-----   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAIM-----   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHHT-----
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHHh-----
Confidence            345567999999999999999999999999999999999998764         467889999999999888776     


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------  174 (297)
                        ++|+|||+|+...        .+.+.+++.+++|+.++..+++++..    .+.+++|++||.....           
T Consensus        77 --~~d~vih~A~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E  142 (347)
T 4id9_A           77 --GVSAVLHLGAFMS--------WAPADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTE  142 (347)
T ss_dssp             --TCSEEEECCCCCC--------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCT
T ss_pred             --CCCEEEECCcccC--------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCC
Confidence              7899999999652        22344589999999999999999865    3456899999965432           


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCcc-------------CcchhhHHH--Hh---hcCCCHH
Q 022418          175 --GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP-------------TPFVMEEMS--QI---YAGVDAS  234 (297)
Q Consensus       175 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~-------------t~~~~~~~~--~~---~~~~~~~  234 (297)
                        +..+...|+.+|.+.|.+++.++.+   .+++++.++|+.++             ++.......  ..   .......
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~  219 (347)
T 4id9_A          143 DHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAE  219 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHH
Confidence              2235568999999999999999887   68999999999999             443211000  00   0000000


Q ss_pred             HHHHHHHh-------cCCCCCCC----CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          235 RLLELVYS-------TGVLEGTH----CEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       235 ~~~~~~~~-------~~~~~~~~----~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      .......+       .......+    ++++|+|++++.++....  ..|+++++.+|......+
T Consensus       220 ~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s~~e  282 (347)
T 4id9_A          220 LLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPADFAA  282 (347)
T ss_dssp             HHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEEHHH
T ss_pred             HHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcccHHH
Confidence            01111111       11112345    889999999999997653  358999999987665433

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=1.3e-25  Score=203.41  Aligned_cols=231  Identities=19%  Similarity=0.151  Sum_probs=163.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHH--CCCeEEEEeCCchhHH----------HHHHHhCCCeeEEEecCCCHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFIS--NGAKVVIADIQHQLGQ----------QTAKELGPNATFIACDVTKESDV   95 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~--~G~~Vi~~~r~~~~~~----------~~~~~~~~~v~~~~~D~s~~~~i   95 (297)
                      .++++++|+||||||+|+||++++++|++  +|++|++++|+.....          ......+..+.++.+|++|++++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34678999999999999999999999999  9999999999764211          11111234678999999999988


Q ss_pred             HHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc
Q 022418           96 SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG  175 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~  175 (297)
                      .++      ...++|+|||+||...        .+.+++++.+++|+.++..+++++..    . .+++|++||......
T Consensus        84 ~~~------~~~~~D~vih~A~~~~--------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD--------TTMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGN  144 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG--------GGCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCS
T ss_pred             HHh------hccCCCEEEECCccCC--------ccccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCC
Confidence            876      2358999999999652        13355788999999999999999854    2 356999999543321


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh---
Q 022418          176 ----------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS---  242 (297)
Q Consensus       176 ----------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---  242 (297)
                                ..+...|+.+|.+.|.+++.++.+     +++..++|+.+.+|.......  ..............+   
T Consensus       145 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~--~~~~~~~~~~~~~~~~~~  217 (362)
T 3sxp_A          145 TKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEK--TASMVLQLALGAMAFKEV  217 (362)
T ss_dssp             CCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGG--GSCHHHHHHHHHHTTSEE
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCc--chhHHHHHHHHHHhCCCe
Confidence                      123456999999999999987665     788889999988876432100  000001111111111   


Q ss_pred             ----cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          243 ----TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       243 ----~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                          .......+++++|+|++++++++.+.   +| ++++++|......+
T Consensus       218 ~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s~~e  263 (362)
T 3sxp_A          218 KLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARSYNE  263 (362)
T ss_dssp             ECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEEHHH
T ss_pred             EEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCccHHH
Confidence                11122457889999999999998763   68 99999987665433

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.92  E-value=2e-25  Score=203.51  Aligned_cols=231  Identities=16%  Similarity=0.061  Sum_probs=167.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +..++|+++||||+|+||++++++|+++|++|++++|+.+.....   ....+.++.+|++|++++.++++       ++
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---DMFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh---ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence            445678999999999999999999999999999999987543211   12467889999999998888775       68


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---------------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---------------  174 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---------------  174 (297)
                      |+|||+||...  ...   .+.+++++.+++|+.++.++++++..    .+.+++|++||.....               
T Consensus        95 d~Vih~A~~~~--~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~  165 (379)
T 2c5a_A           95 DHVFNLAADMG--GMG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKES  165 (379)
T ss_dssp             SEEEECCCCCC--CHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             CEEEECceecC--ccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcc
Confidence            99999999652  111   11245688999999999999999865    3446899999976432               


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh--------c
Q 022418          175 ---GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--------T  243 (297)
Q Consensus       175 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~  243 (297)
                         +..+...|+.+|.+.|.+++.++.+   .|++++.++||.++++........  .............+        .
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~  240 (379)
T 2c5a_A          166 DAWPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGD  240 (379)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCCSSSC--CCHHHHHHHHHHHCSSCEEEESC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHH---HCCCEEEEEeCceeCcCCCccccc--ccHHHHHHHHHHhCCCceEEeCC
Confidence               2234568999999999999999877   489999999999999854210000  00000111111111        1


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ......+++++|+|++++.+++..    .|+.+++.+|......+
T Consensus       241 g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~~e  281 (379)
T 2c5a_A          241 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNE  281 (379)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEHHH
T ss_pred             CCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccCHHH
Confidence            112246788999999999999764    57889999887655433

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=1.6e-25  Score=198.37  Aligned_cols=222  Identities=16%  Similarity=0.089  Sum_probs=164.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++|||||+|+||++++++|+++|++|++++|+.+...+.   ....+.++.+|++|.+ +.++++       . |+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih   68 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF---VNPSAELHVRDLKDYS-WGAGIK-------G-DVVFH   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG---SCTTSEEECCCTTSTT-TTTTCC-------C-SEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh---cCCCceEEECccccHH-HHhhcC-------C-CEEEE
Confidence            5799999999999999999999999999999987643322   1457889999999987 654443       3 99999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------cCCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GGLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~~~~~~~Y~  183 (297)
                      +||..      ..+.+.++++..+++|+.++.++++++...    +.+++|++||.....           +..+...|+
T Consensus        69 ~A~~~------~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           69 FAANP------EVRLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             CCSSC------SSSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCC------CchhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            99964      223445567889999999999999998653    456899999976542           223457899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh--------cCCCCCCCCCHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--------TGVLEGTHCEPND  255 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~d  255 (297)
                      .+|.+.|.+++.++.++   |++++.++||.++++......-       ..........        .......+++++|
T Consensus       139 ~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  208 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVI-------YDFIMKLRRNPNVLEVLGDGTQRKSYLYVRD  208 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHH-------HHHHHHHHHCTTEEEEC----CEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChH-------HHHHHHHHhCCCCeEEcCCCCeEEeeEEHHH
Confidence            99999999999999884   8999999999999986432110       0111111111        0112245788999


Q ss_pred             HHHHHHHHhcC-CCCcccccEEEecCCcccccCC
Q 022418          256 IANAALYLASD-DAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       256 ia~~~~~l~~~-~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +|++++++++. ......|+++++.+|......+
T Consensus       209 va~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  242 (312)
T 3ko8_A          209 AVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLD  242 (312)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHH
T ss_pred             HHHHHHHHHHhccccCCCCcEEEEcCCCceeHHH
Confidence            99999999875 1123578999999987655433

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.92  E-value=1.6e-24  Score=194.02  Aligned_cols=220  Identities=17%  Similarity=0.102  Sum_probs=157.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.+...+....+ .++.++.+|++|++++.++++..     +
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~   89 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDL-----Q   89 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhcc-----C
Confidence            34678899999999999999999999999999999999764322111111 46888999999999998888752     7


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc----cC--------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL----GG--------  176 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~----~~--------  176 (297)
                      +|+|||+||...  ..     +.++++  +++|+.++..+++++.+    .+.+++|++||.....    ..        
T Consensus        90 ~D~vih~A~~~~--~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~  156 (333)
T 2q1w_A           90 PDAVVHTAASYK--DP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPR  156 (333)
T ss_dssp             CSEEEECCCCCS--CT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCC
T ss_pred             CcEEEECceecC--CC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCC
Confidence            999999999762  21     334444  99999999999999987    3457999999976543    21        


Q ss_pred             CCC-ccchhhHHHHHHHHHH-HHHHHccCCcEEEEEeCCCccCcchh-hHHHHhhcCCCHHHHHHHHHhc----CCCCCC
Q 022418          177 LAQ-HTYSVSKSAIIGLVKS-MAAELCEYGIRINCISPFAIPTPFVM-EEMSQIYAGVDASRLLELVYST----GVLEGT  249 (297)
Q Consensus       177 ~~~-~~Y~~sK~a~~~~~~~-la~el~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  249 (297)
                      .+. ..|+.+|++.|.+++. ++        ++..++|+.+.++... .....        .+.....+.    ......
T Consensus       157 ~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  220 (333)
T 2q1w_A          157 NPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPI--------FFQRLSEGKKCFVTKARRD  220 (333)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHH--------HHHHHHTTCCCEEEECEEC
T ss_pred             CCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHH--------HHHHHHcCCeeeCCCceEe
Confidence            234 7899999999999887 54        5678888888776521 11111        000111110    112256


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +++++|+|+++.++++...    |+++++++|......
T Consensus       221 ~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~s~~  254 (333)
T 2q1w_A          221 FVFVKDLARATVRAVDGVG----HGAYHFSSGTDVAIK  254 (333)
T ss_dssp             EEEHHHHHHHHHHHHTTCC----CEEEECSCSCCEEHH
T ss_pred             eEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCccHH
Confidence            8899999999999997653    899999998765543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=5.6e-24  Score=195.00  Aligned_cols=235  Identities=11%  Similarity=-0.011  Sum_probs=163.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH--------------------HHHHHHhCCCeeEEEecC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--------------------QQTAKELGPNATFIACDV   89 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~--------------------~~~~~~~~~~v~~~~~D~   89 (297)
                      ...++++||||||+|+||++++++|+++|++|++++|+....                    .......+.++.++.+|+
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            346789999999999999999999999999999999865321                    111112245788999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418           90 TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus        90 s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      +|++++.++++..     ++|+|||+||...  .. ....+.+.+...+++|+.++..+++++.+.-   ...++|++||
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~--~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS  155 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRS--AP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGT  155 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCC--HH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECC
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCC--cc-chhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCc
Confidence            9999999888765     6999999999652  11 1223567778899999999999999987642   1148999999


Q ss_pred             ccccc------------------------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH
Q 022418          170 VTGLL------------------------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS  225 (297)
Q Consensus       170 ~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~  225 (297)
                      .....                        +..+...|+.||++.|.+++.++.++   |+++++++||.|+++.......
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~  232 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEM  232 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGG
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccc
Confidence            75431                        22345689999999999999998874   8999999999999986421000


Q ss_pred             --Hhh---------cCCCHHHHHHHHHhc-------CCCCCCCCCHHHHHHHHHHHhcCCCCcccc--cEEEecC
Q 022418          226 --QIY---------AGVDASRLLELVYST-------GVLEGTHCEPNDIANAALYLASDDAKYVSG--HNLVVDG  280 (297)
Q Consensus       226 --~~~---------~~~~~~~~~~~~~~~-------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG--~~i~vdg  280 (297)
                        ...         .......+.....+.       ......+++++|+|++++.++....  ..|  +++++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          233 HEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             SGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence              000         000011111111111       1122457899999999999987542  246  6888865

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.91  E-value=1.2e-24  Score=192.89  Aligned_cols=219  Identities=16%  Similarity=0.122  Sum_probs=160.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |++|||||+|+||++++++|+++|..|++..|+....+    .....+.++.+|+++ +++.++++       ++|++||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~----~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih   69 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE----FVNEAARLVKADLAA-DDIKDYLK-------GAEEVWH   69 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG----GSCTTEEEECCCTTT-SCCHHHHT-------TCSEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh----hcCCCcEEEECcCCh-HHHHHHhc-------CCCEEEE
Confidence            58999999999999999999999955554444443322    124568899999999 88877765       7899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------cCCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GGLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~~~~~~~Y~  183 (297)
                      +|+..      ..+.+.+++++.+++|+.++..+++++..    .+.+++|++||.....           +..+...|+
T Consensus        70 ~a~~~------~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           70 IAANP------DVRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             CCCCC------CCC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCC------ChhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            99854      22344566788999999999999998765    3457899999976542           334567899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh--------cCCCCCCCCCHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS--------TGVLEGTHCEPND  255 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~d  255 (297)
                      .+|.+.|.+++.++.+   .|++++.++|+.++++......       ....+......        .......+++++|
T Consensus       140 ~sK~~~e~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  209 (313)
T 3ehe_A          140 ASKLACEALIESYCHT---FDMQAWIYRFANVIGRRSTHGV-------IYDFIMKLKRNPEELEILGNGEQNKSYIYISD  209 (313)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCEEEEEECSCEESTTCCCSH-------HHHHHHHHHHCTTEEEESTTSCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHHHh---cCCCEEEEeeccccCcCCCcCh-------HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHH
Confidence            9999999999999988   5899999999999998543110       00111111111        1112246889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +|+++++++++.   ..|+++++.+|......+
T Consensus       210 va~a~~~~~~~~---~~~~~~ni~~~~~~s~~e  239 (313)
T 3ehe_A          210 CVDAMLFGLRGD---ERVNIFNIGSEDQIKVKR  239 (313)
T ss_dssp             HHHHHHHHTTCC---SSEEEEECCCSCCEEHHH
T ss_pred             HHHHHHHHhccC---CCCceEEECCCCCeeHHH
Confidence            999999999733   468999999987655443

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=2.3e-23  Score=173.12  Aligned_cols=198  Identities=15%  Similarity=0.111  Sum_probs=150.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..+..   ...++.++.+|++|++++.++++       .+|++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   72 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDAVI   72 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            48999999999999999999999999999999988654321   13568899999999998887775       579999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC----CCccchhhHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL----AQHTYSVSKSAI  189 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~----~~~~Y~~sK~a~  189 (297)
                      |++|...  ..   +.        .++|+.++..+++++.+.    +.+++|++||.......+    +...|+.+|.++
T Consensus        73 ~~a~~~~--~~---~~--------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~  135 (206)
T 1hdo_A           73 VLLGTRN--DL---SP--------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (206)
T ss_dssp             ECCCCTT--CC---SC--------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             ECccCCC--CC---Cc--------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHHHHHHHH
Confidence            9999763  11   11        137888888888887653    456899999987654433    557899999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCc-cCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAI-PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +.+++       ..+++++.++||.+ +++......    ...          ...+. +.+++++|+|+++.++++.+.
T Consensus       136 e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~----~~~----------~~~~~-~~~i~~~Dva~~~~~~~~~~~  193 (206)
T 1hdo_A          136 HKVLR-------ESGLKYVAVMPPHIGDQPLTGAYT----VTL----------DGRGP-SRVISKHDLGHFMLRCLTTDE  193 (206)
T ss_dssp             HHHHH-------HTCSEEEEECCSEEECCCCCSCCE----EES----------SSCSS-CSEEEHHHHHHHHHHTTSCST
T ss_pred             HHHHH-------hCCCCEEEEeCCcccCCCCCcceE----ecc----------cCCCC-CCccCHHHHHHHHHHHhcCcc
Confidence            98874       26899999999998 443321110    000          11111 578899999999999997753


Q ss_pred             CcccccEEEecCCc
Q 022418          269 KYVSGHNLVVDGGF  282 (297)
Q Consensus       269 ~~~tG~~i~vdgG~  282 (297)
                        .+|++++++||+
T Consensus       194 --~~g~~~~i~~g~  205 (206)
T 1hdo_A          194 --YDGHSTYPSHQY  205 (206)
T ss_dssp             --TTTCEEEEECCC
T ss_pred             --ccccceeeeccc
Confidence              689999999985

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.91  E-value=4.4e-24  Score=191.90  Aligned_cols=237  Identities=13%  Similarity=0.078  Sum_probs=164.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh----------HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----------GQQTAKELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~----------~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +|+++||||+|+||++++++|+++|++|++++|+...          .+.+.+..+.++.++.+|++|++++.++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5899999999999999999999999999999885432          22222223557889999999999998887752 


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--------
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--------  175 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--------  175 (297)
                          ++|+|||+||...  .    ..+.+++++.+++|+.++.++++++..    .+.+++|++||......        
T Consensus        81 ----~~d~vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~E  146 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKA--V----GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDE  146 (348)
T ss_dssp             ----CEEEEEECCSCCC--H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCCCcC--c----cchhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCcCC
Confidence                7999999999652  1    113466788999999999999998754    34578999999765421        


Q ss_pred             ---CCC-CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc---CCCHHHHHHHHHhc-----
Q 022418          176 ---GLA-QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYST-----  243 (297)
Q Consensus       176 ---~~~-~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~-----  243 (297)
                         ..+ ...|+.+|++.|.+++.++.+  ..+++++.++|+.+.++.....+.....   ......+.....+.     
T Consensus       147 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (348)
T 1ek6_A          147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (348)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeE
Confidence               112 678999999999999999887  3469999999999987732000000000   00001111111100     


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          244 ----------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       244 ----------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                                ......+++++|+|++++.++........++++++.+|......
T Consensus       225 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~  278 (348)
T 1ek6_A          225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVL  278 (348)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHH
T ss_pred             EeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHH
Confidence                      01113578999999999999864321223489999888765433

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.3e-23  Score=188.37  Aligned_cols=214  Identities=12%  Similarity=0.053  Sum_probs=156.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.+..+.+.   ...+.++.+|++|++++.++++       ++|+|||
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih   83 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA---YLEPECRVAEMLDHAGLERALR-------GLDGVIF   83 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG---GGCCEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc---cCCeEEEEecCCCHHHHHHHHc-------CCCEEEE
Confidence            58999999999999999999999999999999876543321   1267889999999998887765       6899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC----------------
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA----------------  178 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~----------------  178 (297)
                      +||...        .+.+++++.+++|+.++.++++++.+.    +.+++|++||.....+.+.                
T Consensus        84 ~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~  151 (342)
T 2x4g_A           84 SAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG  151 (342)
T ss_dssp             C--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTT
T ss_pred             CCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccc
Confidence            999652        234567889999999999999999874    3468999999876543332                


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch-hhHHHHhhcCCCHHHHHHHHHhcCC----CCCCCCCH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV-MEEMSQIYAGVDASRLLELVYSTGV----LEGTHCEP  253 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  253 (297)
                      ...|+.+|.+.|.+++.++.   + |++++.++||.++++.. ....        .........+...    ....++++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v  219 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTT--------GRVITAIGNGEMTHYVAGQRNVIDA  219 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCST--------THHHHHHHTTCCCEEECCEEEEEEH
T ss_pred             cChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccH--------HHHHHHHHcCCCccccCCCcceeeH
Confidence            67899999999999999875   3 89999999999999865 2001        1111111111110    11347899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          254 NDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       254 ~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +|+|+++.++++...   .|+++++++|. ...
T Consensus       220 ~Dva~~~~~~~~~~~---~g~~~~v~~~~-~s~  248 (342)
T 2x4g_A          220 AEAGRGLLMALERGR---IGERYLLTGHN-LEM  248 (342)
T ss_dssp             HHHHHHHHHHHHHSC---TTCEEEECCEE-EEH
T ss_pred             HHHHHHHHHHHhCCC---CCceEEEcCCc-ccH
Confidence            999999999997653   28999999987 443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=2.4e-25  Score=202.77  Aligned_cols=224  Identities=13%  Similarity=0.066  Sum_probs=164.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +.+++|+++||||+|+||++++++|+++| ++|++++|+.+...+... ...++.++.+|++|++++.++++       +
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~   99 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQD-------E   99 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhh-------C
Confidence            45788999999999999999999999999 999999998654221111 13568899999999988776654       7


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccc-------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLL-------------  174 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~-------------  174 (297)
                      +|+|||+||...  .    ..+.+++++.+++|+.++..+++++..    . +..++|++||.....             
T Consensus       100 ~d~Vih~A~~~~--~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~  169 (377)
T 2q1s_A          100 YDYVFHLATYHG--N----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATEET  169 (377)
T ss_dssp             CSEEEECCCCSC--H----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------CCC
T ss_pred             CCEEEECCCccC--c----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCccccc
Confidence            899999999652  1    123456788999999999999998843    3 456899999975321             


Q ss_pred             ---cC-CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch---------hh------HHHHhhcCCCHHH
Q 022418          175 ---GG-LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV---------ME------EMSQIYAGVDASR  235 (297)
Q Consensus       175 ---~~-~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~---------~~------~~~~~~~~~~~~~  235 (297)
                         +. .+...|+.+|.+.|.+++.++.+   .|++++.++||.++++..         ..      ...        ..
T Consensus       170 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~--------~~  238 (377)
T 2q1s_A          170 DIVSLHNNDSPYSMSKIFGEFYSVYYHKQ---HQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP--------TF  238 (377)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH--------HH
T ss_pred             ccccccCCCCchHHHHHHHHHHHHHHHHH---hCCCEEEEeeccEECCCCcccccccccCcccccccHHH--------HH
Confidence               22 44578999999999999999877   389999999999999865         21      111        11


Q ss_pred             HHHHHHhc-------CCCCCCCCCHHHHHHH-HHHHhcCCCCcccccEEEecCCccccc
Q 022418          236 LLELVYST-------GVLEGTHCEPNDIANA-ALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       236 ~~~~~~~~-------~~~~~~~~~~~dia~~-~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ......+.       ......+++++|+|++ ++.+++.+.   +| ++++++|.....
T Consensus       239 ~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s~  293 (377)
T 2q1s_A          239 IYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETSI  293 (377)
T ss_dssp             HHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEEH
T ss_pred             HHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCceeH
Confidence            11111111       1112457889999999 999997653   78 999999865543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=5.6e-24  Score=190.58  Aligned_cols=223  Identities=18%  Similarity=0.232  Sum_probs=153.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HhC---CCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK--ELG---PNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~---~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      |.+++|++|||||+|+||++++++|+++|++|+++.|+.+..++...  .+.   .++.++.+|++|++++.++++    
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            34578999999999999999999999999999999998764332221  121   247889999999998887765    


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-------  177 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-------  177 (297)
                         .+|+|||+|+..  .   ....  +..++.+++|+.++.++++++.+..   ..+++|++||..+..+.+       
T Consensus        77 ---~~d~Vih~A~~~--~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 ---GCTGVFHVATPM--D---FESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             ---TCSEEEECCCCC--C---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             ---CCCEEEEecccc--C---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccC
Confidence               579999999854  1   1112  2235689999999999999988753   246899999987544321       


Q ss_pred             ---------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH----h---hcCCCHHH
Q 022418          178 ---------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ----I---YAGVDASR  235 (297)
Q Consensus       178 ---------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~---~~~~~~~~  235 (297)
                                     +...|+.||.+.|.+++.++.+   .|+++++++||.+++|+.......    .   ..+ ....
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g-~~~~  219 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITG-NEAH  219 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHT-CGGG
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC-CCcc
Confidence                           2336999999999998887765   589999999999999864321100    0   000 0000


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          236 LLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                           .... ...++++++|+|++++++++..  ..+|..+..+++
T Consensus       220 -----~~~~-~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~  257 (337)
T 2c29_D          220 -----YSII-RQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSHD  257 (337)
T ss_dssp             -----HHHH-TEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCEE
T ss_pred             -----cccc-CCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCCC
Confidence                 0000 1145899999999999999753  235654433433

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=3.3e-25  Score=198.49  Aligned_cols=220  Identities=14%  Similarity=0.175  Sum_probs=163.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC---C---CeEEEEeCCchh--HHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISN---G---AKVVIADIQHQL--GQQTAKEL--GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~---G---~~Vi~~~r~~~~--~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      |+++||||+|+||++++++|+++   |   ++|++++|+...  .+.. +.+  ..++.++.+|++|++++.+++     
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh-----
Confidence            47999999999999999999997   8   999999986421  1111 112  356889999999998887776     


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc----------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL----------  174 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~----------  174 (297)
                        .++|+|||+||...      .+.+.+++++.+++|+.++..+++++.+.    +.+++|++||.....          
T Consensus        75 --~~~d~Vih~A~~~~------~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~  142 (337)
T 1r6d_A           75 --RGVDAIVHFAAESH------VDRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTES  142 (337)
T ss_dssp             --TTCCEEEECCSCCC------HHHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             --cCCCEEEECCCccC------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCC
Confidence              37999999999652      11234567889999999999999999874    346899999975432          


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhc-------C
Q 022418          175 -GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYST-------G  244 (297)
Q Consensus       175 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~  244 (297)
                       +..+...|+.+|.+.|.+++.++.+   .|++++.++||.++++....  ...        ........+.       .
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g~~~~ilrp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  211 (337)
T 1r6d_A          143 SPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEKLIP--------LFVTNLLDGGTLPLYGDG  211 (337)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSHHH--------HHHHHHHTTCCEEEETTS
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---HCCCEEEEEeeeeECCCCCCCChHH--------HHHHHHhcCCCcEEeCCC
Confidence             2335678999999999999999887   47999999999999986421  111        1111111111       1


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .....+++++|+|+++..+++..   .+|+++++++|.....
T Consensus       212 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  250 (337)
T 1r6d_A          212 ANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLELTN  250 (337)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             CeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCccH
Confidence            11235789999999999998754   3789999999876543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=3e-24  Score=196.46  Aligned_cols=169  Identities=17%  Similarity=0.162  Sum_probs=134.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHH-HCCCeEEEEeCCchh---------HHHH---HHHhC-----CC---eeEEEecCCCH
Q 022418           34 EKVALITGAASGIGKATAAKFI-SNGAKVVIADIQHQL---------GQQT---AKELG-----PN---ATFIACDVTKE   92 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~-~~G~~Vi~~~r~~~~---------~~~~---~~~~~-----~~---v~~~~~D~s~~   92 (297)
                      +|++|||||+|+||++++++|+ ++|++|++++|+...         .+..   .+++.     ..   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            5789999999999999999999 999999999997654         2333   22221     24   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      +++.+++++    ++++|+|||+||...  .    ..+.+++++.+++|+.++..+++++..    .+.+++|++||...
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~--~----~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLA--V----GESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCC--H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccC--c----CcchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998887764    456999999999652  1    114567789999999999999998755    34578999999654


Q ss_pred             cccCC------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc
Q 022418          173 LLGGL------------------AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF  219 (297)
Q Consensus       173 ~~~~~------------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~  219 (297)
                      .....                  +...|+.+|++.|.+++.++.++   |+++++++|+.++++.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            32111                  25689999999999999999885   8999999999998875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.91  E-value=3.4e-25  Score=201.14  Aligned_cols=236  Identities=14%  Similarity=0.140  Sum_probs=167.5

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCC-CHHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVT-KESDVSDAVDFTISK  105 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~~~~~~  105 (297)
                      .+.++++|+++||||+|+||++++++|+++ |++|++++|+.+.......  ..++.++.+|++ |.+.+.++++     
T Consensus        18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~-----   90 (372)
T 3slg_A           18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVK-----   90 (372)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhc-----
Confidence            344577899999999999999999999998 9999999998876544322  257899999999 9999988886     


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC---------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG---------  176 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~---------  176 (297)
                        ++|+|||+|+...  .    ....++..+.+++|+.++..+++++...    + .++|++||.......         
T Consensus        91 --~~d~Vih~A~~~~--~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~  157 (372)
T 3slg_A           91 --KCDVILPLVAIAT--P----ATYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDA  157 (372)
T ss_dssp             --HCSEEEECBCCCC--H----HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTT
T ss_pred             --cCCEEEEcCcccc--H----HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCccc
Confidence              5799999999762  1    1234567789999999999999998663    3 689999996433210         


Q ss_pred             ---------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh--hcCCCHHHHHHHHHh---
Q 022418          177 ---------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYS---  242 (297)
Q Consensus       177 ---------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~---  242 (297)
                               .+...|+.+|.+.|.+++.++.+    |++++.++|+.++++.........  ........+.....+   
T Consensus       158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (372)
T 3slg_A          158 SALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENI  233 (372)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCE
T ss_pred             cccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCc
Confidence                     23347999999999999988765    799999999999998642100000  000000111111111   


Q ss_pred             ----cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC-CcccccC
Q 022418          243 ----TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDG-GFTSFKN  287 (297)
Q Consensus       243 ----~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdg-G~~~~~~  287 (297)
                          .......+++++|+|++++.++........|+++++.+ |......
T Consensus       234 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~  283 (372)
T 3slg_A          234 SLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVR  283 (372)
T ss_dssp             EEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHH
T ss_pred             EEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHH
Confidence                11122357899999999999998764446799999999 5554433

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=3.6e-24  Score=194.14  Aligned_cols=230  Identities=13%  Similarity=0.105  Sum_probs=160.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH-----HHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-----QQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..     +...+..   +.++.++.+|++|++++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            47899999999999999999999999999999986532     1111111   246888999999999999988865   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------  175 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------  175 (297)
                        ++|+||||||...  .    +.+.+++++.+++|+.++..+++++.+...+ +.+++|++||......          
T Consensus        78 --~~d~vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSH--V----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCT--T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccC--c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              7899999999752  1    2334557889999999999999999886532 2479999999765422          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHHhc--------CC
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYST--------GV  245 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~  245 (297)
                       ..+...|+.+|++.+.+++.++.+   .++.+..++|+.++++..... .....    ...+.....+.        ..
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~r~~~~~gp~~~~~~~~~~~----~~~~~~~~~g~~~~~~~g~~~  221 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRES---YGMYACNGILFNHESPRRGETFVTRKI----TRAIANIAQGLESCLYLGNMD  221 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHTTSCCCEEESCTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHH---hCCCeEEEEECCccCCCCCCcchhhHH----HHHHHHHHcCCCCceeecCCC
Confidence             134568999999999999999887   467777888877776543211 00000    00111111111        11


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ....+++++|+|++++.++....    ++.+++.+|.....
T Consensus       222 ~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  258 (372)
T 1db3_A          222 SLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQYSV  258 (372)
T ss_dssp             CEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCCEEH
T ss_pred             ceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCceeH
Confidence            22457899999999999986542    47888887765543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.90  E-value=4.3e-24  Score=182.20  Aligned_cols=198  Identities=15%  Similarity=0.109  Sum_probs=139.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ...|+++||||+|+||++++++|+++| ++|++++|+.+++++.   ....+.++.+|++|++++.++++       ++|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   90 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP---YPTNSQIIMGDVLNHAALKQAMQ-------GQD   90 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS---CCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc---ccCCcEEEEecCCCHHHHHHHhc-------CCC
Confidence            445899999999999999999999999 8999999998765432   13478899999999999988876       679


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc---------c
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH---------T  181 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~---------~  181 (297)
                      +||||+|..          ...              ..++.+++.+++.+.+++|++||..+..+.+...         .
T Consensus        91 ~vv~~a~~~----------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~  146 (236)
T 3qvo_A           91 IVYANLTGE----------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE  146 (236)
T ss_dssp             EEEEECCST----------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC----------------CG
T ss_pred             EEEEcCCCC----------chh--------------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc
Confidence            999999842          011              1244666666666778999999988765433211         1


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +...+...       ...+.+.||+++.|+||++.++.......              .....+..+++++++|+|++++
T Consensus       147 ~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~--------------~~~~~~~~~~~i~~~DvA~~i~  205 (236)
T 3qvo_A          147 PLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYEL--------------TSRNEPFKGTIVSRKSVAALIT  205 (236)
T ss_dssp             GGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEE--------------ECTTSCCSCSEEEHHHHHHHHH
T ss_pred             hHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEE--------------eccCCCCCCcEECHHHHHHHHH
Confidence            11222221       22334679999999999999875322100              0011122367789999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++++++..+. |+.+.++++.+..
T Consensus       206 ~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          206 DIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHHcCccccc-CeeEEecCCCCCC
Confidence            9999886555 8999999988765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=3.8e-24  Score=194.52  Aligned_cols=229  Identities=13%  Similarity=0.085  Sum_probs=163.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHH----hCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAKE----LGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++...+.    ....+.++.+|++|++++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998643     2221110    1246888999999999999988865   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------  175 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------  175 (297)
                        ++|+|||+||...      ...+.+++++.+++|+.++..+++++.+... ++.+++|++||......          
T Consensus       102 --~~d~vih~A~~~~------~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSH------VKISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCC------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCccc------ccccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccC
Confidence              7899999999651      1124567889999999999999999988653 22379999999776432          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh-HHHHhhcCCCHHHHHHHHHhc--------CC
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME-EMSQIYAGVDASRLLELVYST--------GV  245 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~  245 (297)
                       ..+...|+.+|++.+.+++.++.+   .++.+..++|+.++++.... ......    ...+.....+.        ..
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~~~gp~~~~~~~~~~~----~~~~~~~~~g~~~~~~~g~~~  245 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKI----SRSVAKIYLGQLECFSLGNLD  245 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEecccccCCCCCCCcchHHH----HHHHHHHHcCCCceeEeCCCC
Confidence             224568999999999999999887   47888889998887764321 110000    01111111111        11


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ....+++++|+|++++.++....    ++.+++.+|.....
T Consensus       246 ~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  282 (375)
T 1t2a_A          246 AKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEVHSV  282 (375)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCCEEH
T ss_pred             ceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCcccH
Confidence            12457899999999999987642    36788877765443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=1.4e-23  Score=194.11  Aligned_cols=232  Identities=13%  Similarity=0.037  Sum_probs=162.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHH------------HhCCCeeEEEecCCCH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---GQQTAK------------ELGPNATFIACDVTKE   92 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~---~~~~~~------------~~~~~v~~~~~D~s~~   92 (297)
                      .+....+|++|||||+|+||++++++|++.|++|++++|+.+.   .+.+.+            ....++.++.+|++|+
T Consensus        63 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           63 SLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             SSCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             cCCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            3445678899999999999999999999999999999998872   222211            1236799999999998


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      +++.        ..+++|+||||||...         ..+++++.+++|+.++.++++++.+     +..++|++||...
T Consensus       143 ~~l~--------~~~~~d~Vih~A~~~~---------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~  200 (427)
T 4f6c_A          143 DDVV--------LPENMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  200 (427)
T ss_dssp             CCCC--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG
T ss_pred             ccCC--------CcCCCCEEEECCcccC---------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh
Confidence            8877        4568999999999652         2356788999999999999999987     3468999999886


Q ss_pred             --c----------------ccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcCCCH
Q 022418          173 --L----------------LGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAGVDA  233 (297)
Q Consensus       173 --~----------------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~  233 (297)
                        .                .+..+...|+.+|++.|.+++.++.    .|++++.++||.|.++.....+... ....-.
T Consensus       201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~  276 (427)
T 4f6c_A          201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFS  276 (427)
T ss_dssp             GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHH
T ss_pred             CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHH
Confidence              0                0122567899999999999998753    5899999999999988543210000 000000


Q ss_pred             HHHHHHHHhc------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          234 SRLLELVYST------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       234 ~~~~~~~~~~------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ..........      ......+++++|+|++++.++....   .|+++++++|......+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~~e  334 (427)
T 4f6c_A          277 MVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  334 (427)
T ss_dssp             HHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEHHH
T ss_pred             HHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcHHH
Confidence            1111111100      0122457899999999999997663   89999999987665433

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.90  E-value=3.5e-23  Score=179.62  Aligned_cols=192  Identities=17%  Similarity=0.141  Sum_probs=149.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.+..      ....+.++.+|++|++++.++++       ++|+|||
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   69 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------AEAHEEIVACDLADAQAVHDLVK-------DCDGIIH   69 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------CCTTEEECCCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------cCCCccEEEccCCCHHHHHHHHc-------CCCEEEE
Confidence            6899999999999999999999999999999987532      12357888999999998888775       5899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC------------CCccc
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL------------AQHTY  182 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~------------~~~~Y  182 (297)
                      |||..  .        .+++++.+++|+.++.++++++.+    .+.+++|++||.......+            +...|
T Consensus        70 ~a~~~--~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y  135 (267)
T 3ay3_A           70 LGGVS--V--------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLY  135 (267)
T ss_dssp             CCSCC--S--------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHH
T ss_pred             CCcCC--C--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChH
Confidence            99965  1        123578899999999999999875    3457999999987653322            34789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCcc-CcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP-TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +.+|++.+.+++.++.+   .|++++.++||.+. ++...            ..           ...+++++|+|+++.
T Consensus       136 ~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~~------------~~-----------~~~~~~~~dva~~~~  189 (267)
T 3ay3_A          136 GLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKDA------------RM-----------MATWLSVDDFMRLMK  189 (267)
T ss_dssp             HHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCSH------------HH-----------HHHBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCCC------------Ce-----------eeccccHHHHHHHHH
Confidence            99999999999988654   68999999999985 33211            10           034679999999999


Q ss_pred             HHhcCCCCcccccEEEecCC
Q 022418          262 YLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG  281 (297)
                      .++....  ..+..+.+.++
T Consensus       190 ~~~~~~~--~~~~~~~~~~~  207 (267)
T 3ay3_A          190 RAFVAPK--LGCTVVYGASA  207 (267)
T ss_dssp             HHHHSSC--CCEEEEEECCS
T ss_pred             HHHhCCC--CCceeEecCCC
Confidence            9987652  12345555444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.90  E-value=3.2e-24  Score=191.44  Aligned_cols=232  Identities=14%  Similarity=0.105  Sum_probs=164.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.....   +.+..++.++.+|++|++++.++++.     .++|+|||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEE
Confidence            68999999999999999999999999999998765322   22333688899999999998888765     37999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  183 (297)
                      +||...  .    ..+.+++++.+++|+.++..+++++..    .+.+++|++||......           ..+...|+
T Consensus        74 ~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           74 FAADSL--V----GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             CCCCCC--H----HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             CCcccC--c----cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            999652  1    124567788999999999999998765    34568999999765421           12457899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-h-cCCCHHHHHHHHHhcC---------------CC
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-Y-AGVDASRLLELVYSTG---------------VL  246 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~---------------~~  246 (297)
                      .+|.+.|.+++.++.+   .|++++.++||.+.++.....+... . ....-..+........               ..
T Consensus       144 ~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  220 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTC  220 (330)
T ss_dssp             HHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCce
Confidence            9999999999999877   4899999999999987421100000 0 0000011111111110               01


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ...+++++|+|++++.++........|+++++.+|......
T Consensus       221 ~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~  261 (330)
T 2c20_A          221 IRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVK  261 (330)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHH
T ss_pred             eEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHH
Confidence            13578899999999998864322124689999887665433

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.90  E-value=1.2e-23  Score=188.58  Aligned_cols=225  Identities=16%  Similarity=0.146  Sum_probs=159.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCH-HHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE-SDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||+|+||++++++|+++ |++|++++|+.+..+....  ...+.++.+|++|. +.+.++++       ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-------~~d~v   71 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KCDVV   71 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH-------HCSEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhcc-------CCCEE
Confidence            57999999999999999999998 8999999998876543221  24688999999984 55666665       47999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------------
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------------  176 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------------  176 (297)
                      ||+||...  .    ....+++.+.+++|+.++..+++++.+    .+ .++|++||.......                
T Consensus        72 ih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           72 LPLVAIAT--P----IEYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             EECBCCCC--H----HHHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             EEcccccC--c----cchhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            99999652  1    112345778999999999999998865    23 789999996643211                


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhc-------CC
Q 022418          177 --LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYST-------GV  245 (297)
Q Consensus       177 --~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~  245 (297)
                        .+...|+.+|.+.|.+++.++.+   .|++++.++||.++++..........  .......+.....+.       ..
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  217 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHh---cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCC
Confidence              11237999999999999999877   48999999999999986421000000  000001111111111       11


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ....+++++|+|++++.+++......+|+++++++|.
T Consensus       218 ~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            1235789999999999999765434679999999884

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=6e-24  Score=190.02  Aligned_cols=230  Identities=15%  Similarity=0.089  Sum_probs=162.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ-QTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...+|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+  ...+.++.+|++|++++.++++..     
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            456789999999999999999999999999999999875421 112222  246888999999999999988865     


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccccC----------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLGG----------  176 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~~----------  176 (297)
                      ++|+|||+||...  .    +.+.+++.+.+++|+.++..+++++.+.    + .+++|++||.....+.          
T Consensus        86 ~~d~Vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~  155 (335)
T 1rpn_A           86 QPQEVYNLAAQSF--V----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTP  155 (335)
T ss_dssp             CCSEEEECCSCCC--H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             CCCEEEECccccc--h----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccC
Confidence            7899999999651  1    1122456789999999999999998764    3 3689999997654221          


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHHhc--------CCC
Q 022418          177 -LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYST--------GVL  246 (297)
Q Consensus       177 -~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~  246 (297)
                       .+...|+.+|.+.|.+++.++.+   .++++..++|+.++++..... .....    ...+.....+.        ...
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~~~~~----~~~~~~~~~g~~~~~~~g~g~~  228 (335)
T 1rpn_A          156 FYPRSPYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKV----TDAVARIKLGKQQELRLGNVDA  228 (335)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHTTSCSCEEESCTTC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCcEEEEeeCcccCCCCCCCcchHHH----HHHHHHHHcCCCceEEeCCCcc
Confidence             23458999999999999999877   478899999999988753211 00000    01111111111        011


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ...+++++|+|++++.++....    ++.+++.+|.....
T Consensus       229 ~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  264 (335)
T 1rpn_A          229 KRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTTTV  264 (335)
T ss_dssp             EEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEEEH
T ss_pred             eeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCccH
Confidence            1347889999999999997652    47888888775543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=4.1e-23  Score=183.49  Aligned_cols=217  Identities=17%  Similarity=0.183  Sum_probs=147.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-Cchh---HHHHHHHhC---CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQL---GQQTAKELG---PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~---~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   .... ..+.   .++.++.+|++|++++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5432   2211 1111   246788999999999888775      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHH-HHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC-------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEV-FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA-------  178 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~-------  178 (297)
                       .+|+|||+|+..        +.+.++ +++.+++|+.++.++++++.+..   +.+++|++||..+..+.+.       
T Consensus        74 -~~d~vih~A~~~--------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPI--------DFAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCcc--------cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             579999999632        112222 35689999999999999987631   3579999999875433211       


Q ss_pred             --------------C-ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc
Q 022418          179 --------------Q-HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST  243 (297)
Q Consensus       179 --------------~-~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (297)
                                    . ..|+.||.+.|.+++.++.+   .|++++.++||.+++++........     .........+.
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~-----~~~~~~~~~g~  213 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDS-----IEKALVLVLGK  213 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHH-----HHHHTHHHHSC
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCch-----HHHHHHHHhCC
Confidence                          1 16999999988888776654   6899999999999998753211000     00000111111


Q ss_pred             C-CCC-C--CCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 022418          244 G-VLE-G--THCEPNDIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       244 ~-~~~-~--~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                      . ... .  .+++++|+|++++++++...  .+|+ +++.+
T Consensus       214 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          214 KEQIGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             GGGCCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             CccCcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            0 000 1  47899999999999996532  5676 55543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=6.7e-24  Score=193.28  Aligned_cols=230  Identities=16%  Similarity=0.064  Sum_probs=162.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHh---CC-CeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAKEL---GP-NATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~~~---~~-~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++......   +. .+.++.+|++|++++.++++..   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998653     22211111   12 6888999999999999888865   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccc----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLL----------  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~----------  174 (297)
                        ++|+|||+||...  .    +.+.++++..+++|+.++..+++++.+...+ .+.+++|++||.....          
T Consensus       106 --~~d~Vih~A~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSH--V----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCC--H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccC--c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              7899999999652  1    2345678899999999999999999987533 2246999999976532          


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHHhc--------CC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYST--------GV  245 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~  245 (297)
                      +..+...|+.+|++.|.+++.++.++   ++.+..++|..+.+|..... .....    ...+.....+.        ..
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~----~~~~~~~~~g~~~~~~~g~~~  250 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKI----TRALGRIKVGLQTKLFLGNLQ  250 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHH----HHHHHHHHcCCCCeEEeCCCC
Confidence            23456789999999999999998874   56666666655555432110 00000    00011111111        11


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ....+++++|+|++++++++...    ++++++.+|.....
T Consensus       251 ~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  287 (381)
T 1n7h_A          251 ASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGHTV  287 (381)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEEEH
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCcH
Confidence            22457899999999999997652    57899998876543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=7.2e-24  Score=179.31  Aligned_cols=209  Identities=14%  Similarity=0.070  Sum_probs=157.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+..    ...+.++.+|++|++++.++++       ++|+|||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   73 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----NEHLKVKKADVSSLDEVCEVCK-------GADAVIS   73 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----CTTEEEECCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----cCceEEEEecCCCHHHHHHHhc-------CCCEEEE
Confidence            7899999999999999999999999999999998754322    3578999999999999988876       5899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------CCCccchh
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------LAQHTYSV  184 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------~~~~~Y~~  184 (297)
                      +||...  .          ..+.+++|+.++..+++++.+    .+..++|++||..+..+.          .+...|+.
T Consensus        74 ~a~~~~--~----------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           74 AFNPGW--N----------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             CCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             eCcCCC--C----------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            998541  1          012688899999999998865    344689999998766543          23578999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|.+.+.+.+.++.+   .|++++.++||.+.++......-.  .....    .....   ....+++++|+|++++.++
T Consensus       138 sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~--~~~~~----~~~~~---~~~~~i~~~Dva~ai~~~l  205 (227)
T 3dhn_A          138 VKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYR--LGKDD----MIVDI---VGNSHISVEDYAAAMIDEL  205 (227)
T ss_dssp             HHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCE--EESSB----CCCCT---TSCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCcccccee--ecCCC----cccCC---CCCcEEeHHHHHHHHHHHH
Confidence            999999988887664   689999999999988754211000  00000    00000   1145789999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ..+.  ..|+++.+.+....
T Consensus       206 ~~~~--~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          206 EHPK--HHQERFTIGYLEHH  223 (227)
T ss_dssp             HSCC--CCSEEEEEECCSCC
T ss_pred             hCcc--ccCcEEEEEeehhc
Confidence            8764  57999999876543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=3.6e-23  Score=184.93  Aligned_cols=248  Identities=13%  Similarity=0.056  Sum_probs=178.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHH-HCCCeEEEEeCCchhH---------------HHHHHHhCCCeeEEEecCCCH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFI-SNGAKVVIADIQHQLG---------------QQTAKELGPNATFIACDVTKE   92 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~-~~G~~Vi~~~r~~~~~---------------~~~~~~~~~~v~~~~~D~s~~   92 (297)
                      +....+|++||||||+|||++++.+|+ +.|+.++++++..+..               .+.+++.+.+...+.||++++
T Consensus        45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            346788999999999999999999999 6899999988765422               234455588899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCC-----------Cc---------------------cCCCCHHHHHH---H
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTP-----------RS---------------------IVDLNLEVFDQ---V  137 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~-----------~~---------------------~~~~~~~~~~~---~  137 (297)
                      ++++++++++.+++|++|+||||++......           ++                     +...+.++++.   .
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            9999999999999999999999999762100           00                     11234555554   4


Q ss_pred             HHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC--CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCc
Q 022418          138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL--AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAI  215 (297)
Q Consensus       138 ~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v  215 (297)
                      |....++.|...+...+.|.  +.++++.+|+.++..-.|  ..+.++.+|+++|..++.|+.+++  +++++++.||.+
T Consensus       205 Mg~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~  280 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGL  280 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCC
T ss_pred             HhhhHHHHHHHHHHhhhccc--CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCcc
Confidence            45566677777777777773  458999999988865444  345789999999999999999997  489999999999


Q ss_pred             cCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC-CcccccCCCCC
Q 022418          216 PTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDG-GFTSFKNLKLP  291 (297)
Q Consensus       216 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdg-G~~~~~~~~~~  291 (297)
                      .|.......       .-+.+....++..   +..++.|.+.+.+..|..+. -|-++..+.+|. |+-.++.|-+.
T Consensus       281 vT~AssaIP-------~~ply~~~l~kvm---k~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~d~~el~  346 (401)
T 4ggo_A          281 VTRASAVIP-------VIPLYLASLFKVM---KEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRIDDWELE  346 (401)
T ss_dssp             CCTTGGGSS-------SHHHHHHHHHHHH---HHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEESCTTTTC
T ss_pred             ccchhhcCC-------CchHHHHHHHHHH---HhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccCchhhcC
Confidence            997543211       0111222222211   33456788889999888664 344444555666 66655655543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.89  E-value=1.2e-23  Score=186.50  Aligned_cols=213  Identities=12%  Similarity=0.069  Sum_probs=159.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||+|+||++++++|+++|++|++++|+....+ . +    .+.++.+|++ ++++.++++       ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~----~~~~~~~Dl~-~~~~~~~~~-------~~d~Vi   67 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N----DYEYRVSDYT-LEDLINQLN-------DVDAVV   67 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTT-------TCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C----ceEEEEcccc-HHHHHHhhc-------CCCEEE
Confidence            379999999999999999999999999999999944332 2 2    6889999999 888887765       789999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTY  182 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y  182 (297)
                      |+|+...  ..        ++.+.+++|+.++..+++++..    .+..++|++||......           ..+...|
T Consensus        68 h~a~~~~--~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           68 HLAATRG--SQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             ECCCCCC--SS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EccccCC--CC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            9999763  21        3466789999999999999865    34568999999654321           1235689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHh-------cCCCCCCCCCH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYS-------TGVLEGTHCEP  253 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  253 (297)
                      +.+|.+.|.+++.++.+   .|++++.++|+.+.++....  ....        .......+       .......++++
T Consensus       134 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~v~v  202 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINR--------FFRQAFHGEQLTLHANSVAKREFLYA  202 (311)
T ss_dssp             HHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHH--------HHHHHHTCCCEEESSBCCCCEEEEEH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHH--------HHHHHHcCCCeEEecCCCeEEceEEH
Confidence            99999999999998886   68999999999999986541  1111        11111111       11122457899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          254 NDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       254 ~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      +|+|++++.+++...   .|+++++.+|......+
T Consensus       203 ~Dva~a~~~~~~~~~---~~~~~~i~~~~~~s~~e  234 (311)
T 3m2p_A          203 KDAAKSVIYALKQEK---VSGTFNIGSGDALTNYE  234 (311)
T ss_dssp             HHHHHHHHHHTTCTT---CCEEEEECCSCEECHHH
T ss_pred             HHHHHHHHHHHhcCC---CCCeEEeCCCCcccHHH
Confidence            999999999997663   78999999887665443

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=9e-25  Score=197.34  Aligned_cols=229  Identities=14%  Similarity=0.100  Sum_probs=159.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++||||+|+||++++++|+++| ++|++++|+.+...  ...+. .+. +.+|+++++.++++++.  ..+++
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-~~~-~~~d~~~~~~~~~~~~~--~~~~~  115 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-DLN-IADYMDKEDFLIQIMAG--EEFGD  115 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT-TSC-CSEEEEHHHHHHHHHTT--CCCSS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc-Cce-EeeecCcHHHHHHHHhh--cccCC
Confidence            35778999999999999999999999999 89999999865421  11111 233 67899999888877653  12457


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-----------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-----------  177 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-----------  177 (297)
                      +|+|||+||...  .      +.+++++.+++|+.++..+++++.+.    +. ++|++||........           
T Consensus       116 ~d~Vih~A~~~~--~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          116 VEAIFHEGACSS--T------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             CCEEEECCSCCC--T------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             CCEEEECCcccC--C------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            999999999762  1      22346789999999999999999873    34 899999986543221           


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------CCC-CCC
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------GVL-EGT  249 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~  249 (297)
                      +...|+.+|.+.|.+++.++.+   .|++++.++||.++++.......  ..............+.       ... ...
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGS--MASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGG--GSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcc--cchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence            2568999999999999998766   58999999999999885421000  0000000111111111       001 246


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          250 HCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       250 ~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +++++|+|++++++++...    |+++++++|.....
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s~  290 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGRAESF  290 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEEH
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCCcccH
Confidence            7899999999999997653    88999998876543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=2.6e-23  Score=184.47  Aligned_cols=215  Identities=15%  Similarity=0.076  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.         ..  ++.+|++|++++.++++..     ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~--~~~~Dl~d~~~~~~~~~~~-----~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------PK--FEQVNLLDSNAVHHIIHDF-----QPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------CHHHHHHH-----CCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------CC--eEEecCCCHHHHHHHHHhh-----CCCEEE
Confidence            5899999999999999999999999999999987643         11  6789999999998888765     789999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------CCCCccch
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------GLAQHTYS  183 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------~~~~~~Y~  183 (297)
                      |+||...  .    +.+.+++++.+++|+.++..+++++.+.    + +++|++||.....+          ..+...|+
T Consensus        66 h~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           66 HCAAERR--P----DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             ECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             ECCcccC--h----hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            9999752  1    2345778899999999999999999873    2 48999999876543          34567899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHH-Hh-----cCCCCCCCCCHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV-YS-----TGVLEGTHCEPNDIA  257 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~dia  257 (297)
                      .+|.+.|.+++.++.       .+..++|+.+.++......     ........... .+     .......+++++|+|
T Consensus       135 ~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  202 (315)
T 2ydy_A          135 KTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEE-----SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVA  202 (315)
T ss_dssp             HHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGG-----STTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccc-----cHHHHHHHHHHhcCCCeeeccCceECcEEHHHHH
Confidence            999999999988642       3356677776655332100     00000001111 00     011235788999999


Q ss_pred             HHHHHHhcCC-CCcccccEEEecCCcccccC
Q 022418          258 NAALYLASDD-AKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       258 ~~~~~l~~~~-~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++++++++.. ....+|+.+++++|......
T Consensus       203 ~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~  233 (315)
T 2ydy_A          203 TVCRQLAEKRMLDPSIKGTFHWSGNEQMTKY  233 (315)
T ss_dssp             HHHHHHHHHHHTCTTCCEEEECCCSCCBCHH
T ss_pred             HHHHHHHHhhccccCCCCeEEEcCCCcccHH
Confidence            9999998642 12247899999998765543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.89  E-value=6.8e-23  Score=183.48  Aligned_cols=234  Identities=16%  Similarity=0.136  Sum_probs=157.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~----~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+++||||+|+||++++++|+++|++|++++|...    ..+......+.++.++.+|++|++++.++++..     ++|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            47999999999999999999999999999886432    222222222456888999999999998887652     699


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------cC-CC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------GG-LA  178 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~~-~~  178 (297)
                      +||||||...  .    ..+.+++.+.+++|+.++..+++++..    .+.+++|++||.....           +. ++
T Consensus        76 ~vih~A~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  145 (338)
T 1udb_A           76 TVIHFAGLKA--V----GESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEEECCSCCC--H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEEECCccCc--c----ccchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCCC
Confidence            9999999652  1    112345678899999999999987654    2457899999976432           11 23


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh---cCCCHHHHHHHHHhc------------
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY---AGVDASRLLELVYST------------  243 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~------------  243 (297)
                      ...|+.||++.+.+++.++.+.  .++++..++|+.+.++.....+....   .......+.....+.            
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  223 (338)
T 1udb_A          146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCccc
Confidence            6789999999999999998873  37999999988776652100000000   000001111111100            


Q ss_pred             ---CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          244 ---GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       244 ---~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                         ....+.+++++|+|++++.++........++++++.+|....
T Consensus       224 ~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s  268 (338)
T 1udb_A          224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEE
T ss_pred             CCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCcee
Confidence               011135789999999999887532111234789998776544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.89  E-value=6.3e-22  Score=166.35  Aligned_cols=207  Identities=16%  Similarity=0.096  Sum_probs=136.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||||+||++++++|+++|++|++++|+.++++...    ..+.++.+|++|+++  +       .+.++|+|||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~--~-------~~~~~d~vi~   67 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----KDINILQKDIFDLTL--S-------DLSDQNVVVD   67 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH--H-------HHTTCSEEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----CCCeEEeccccChhh--h-------hhcCCCEEEE
Confidence            47999999999999999999999999999999987665442    578999999999887  2       2247999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC------------CCccc
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL------------AQHTY  182 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~------------~~~~Y  182 (297)
                      +||...  .             ...+|+.++..++    +.+++.+.+++|++||..+..+.+            +...|
T Consensus        68 ~ag~~~--~-------------~~~~~~~~~~~l~----~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  128 (221)
T 3ew7_A           68 AYGISP--D-------------EAEKHVTSLDHLI----SVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYY  128 (221)
T ss_dssp             CCCSST--T-------------TTTSHHHHHHHHH----HHHCSCCSSEEEEECCCC-------------------CCCS
T ss_pred             CCcCCc--c-------------ccchHHHHHHHHH----HHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHH
Confidence            999752  1             1233555555444    445556678999999988765433            34569


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.+|.+.+.+. .+..  ...|++++.++||.+.++.....  . +.. .....  ....   ....+++++|+|++++.
T Consensus       129 ~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~--~-~~~-~~~~~--~~~~---~~~~~i~~~Dva~~~~~  196 (221)
T 3ew7_A          129 PTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG--D-YQI-GKDHL--LFGS---DGNSFISMEDYAIAVLD  196 (221)
T ss_dssp             CCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC--c-eEe-ccccc--eecC---CCCceEeHHHHHHHHHH
Confidence            99999998863 2222  14789999999999998722110  0 000 00000  0001   11357899999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccccC
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++..+.  ..|+.+++.|-.....+
T Consensus       197 ~l~~~~--~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          197 EIERPN--HLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             HHHSCS--CTTSEEECCC-------
T ss_pred             HHhCcc--ccCCEEEECCCCccccc
Confidence            997763  47899999887766544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.88  E-value=4.9e-23  Score=180.73  Aligned_cols=202  Identities=17%  Similarity=0.114  Sum_probs=151.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .-+.|+++||||+|+||++++++|+++|++|++++|+                  .+|++|++++.++++..     ++|
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~-----~~d   65 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------DLDITNVLAVNKFFNEK-----KPN   65 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------cCCCCCHHHHHHHHHhc-----CCC
Confidence            3567899999999999999999999999999999996                  27999999998888765     799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-----------CC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-----------AQ  179 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-----------~~  179 (297)
                      +|||+||...      .+.+.+++++.+++|+.++..+++++.+.    + .++|++||.....+..           +.
T Consensus        66 ~vih~A~~~~------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           66 VVINCAAHTA------VDKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             EEEECCCCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             EEEECCccCC------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCCc
Confidence            9999999651      12335678899999999999999998773    3 3899999976543221           35


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-----CCCCCCCCCHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPN  254 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  254 (297)
                      ..|+.+|.+.|.+++.++.       .+..++|+.+.++ ........        ......+.     ......+++++
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~  198 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTM--------INLGKTHDELKVVHDQVGTPTSTV  198 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHH--------HHHHHHCSEEEEESSCEECCEEHH
T ss_pred             cHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHH--------HHHHhcCCcEEeecCeeeCCccHH
Confidence            6899999999999987642       4788899999876 22221111        01111111     01225678999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      |+|++++++++.+    +|+++++++|.....
T Consensus       199 Dva~~~~~~~~~~----~~~~~~i~~~~~~s~  226 (292)
T 1vl0_A          199 DLARVVLKVIDEK----NYGTFHCTCKGICSW  226 (292)
T ss_dssp             HHHHHHHHHHHHT----CCEEEECCCBSCEEH
T ss_pred             HHHHHHHHHHhcC----CCcEEEecCCCCccH
Confidence            9999999999764    689999999875543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=7.2e-23  Score=180.86  Aligned_cols=227  Identities=12%  Similarity=0.088  Sum_probs=157.5

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHH-HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           36 VALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQ-QTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~-~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++||||+|+||++++++|+++| ++|++++|+.+... ....    .+. +.+|+++.+.++++++...  ++++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEE--FGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccc--cCCCcEEE
Confidence            48999999999999999999999 89999999875421 1111    122 6789999888777665210  23699999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTY  182 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y  182 (297)
                      |+||...  .      +.+++++.+++|+.++..+++++.+.    +. ++|++||.......           .+...|
T Consensus        74 ~~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           74 HEGACSS--T------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             ECCSCCC--T------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             ECccccc--C------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            9999762  1      22346788999999999999998763    34 89999997643221           235689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh------HHHHhhcCCCHHHHHHHHHhcCCC-CCCCCCHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME------EMSQIYAGVDASRLLELVYSTGVL-EGTHCEPND  255 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d  255 (297)
                      +.+|.+.|.+++.++.+   .|++++.++||.++++....      ................ ..+.... ...+++++|
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPK-LFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------------CBCEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcE-EecCCCcceEccEEHHH
Confidence            99999999999998766   58999999999999986431      1111110000000000 1111112 256789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccCCCC
Q 022418          256 IANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       256 ia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      +|++++.++....    |+.+++.+|......+.+
T Consensus       217 va~~~~~~~~~~~----~~~~~i~~~~~~s~~e~~  247 (310)
T 1eq2_A          217 VADVNLWFLENGV----SGIFNLGTGRAESFQAVA  247 (310)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCBCHHHHH
T ss_pred             HHHHHHHHHhcCC----CCeEEEeCCCccCHHHHH
Confidence            9999999997653    789999988766544433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=2.9e-21  Score=162.79  Aligned_cols=200  Identities=14%  Similarity=0.032  Sum_probs=142.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||||+||++++++|+++|++|++++|+.++++..   ....+.++.+|++|+++  +       .++++|+|||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~D~~d~~~--~-------~~~~~d~vi~   68 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---LGATVATLVKEPLVLTE--A-------DLDSVDAVVD   68 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---TCTTSEEEECCGGGCCH--H-------HHTTCSEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc---cCCCceEEecccccccH--h-------hcccCCEEEE
Confidence            4699999999999999999999999999999998765543   23578999999999887  2       2347999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC--------------Cc
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA--------------QH  180 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~--------------~~  180 (297)
                      |||...  ..    .       ...+|+.++.    .+++.+++.+ +++|++||.++..+.+.              ..
T Consensus        69 ~ag~~~--~~----~-------~~~~n~~~~~----~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
T 3h2s_A           69 ALSVPW--GS----G-------RGYLHLDFAT----HLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQP  130 (224)
T ss_dssp             CCCCCT--TS----S-------CTHHHHHHHH----HHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGST
T ss_pred             CCccCC--Cc----c-------hhhHHHHHHH----HHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccch
Confidence            999751  11    1       1245666654    4555556666 89999999877654332              56


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .|+.+|.+.+.+ +.   .....+++++.++||.+.++.....+.......          ........+++++|+|+++
T Consensus       131 ~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~----------~~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          131 WYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATSYVAGKDTL----------LVGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             THHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCCEEEESSBC----------CCCTTSCCBCCHHHHHHHH
T ss_pred             hhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccCceeccccc----------ccCCCCCceEeHHHHHHHH
Confidence            899999998854 22   223578999999999999873221110000000          0011125689999999999


Q ss_pred             HHHhcCCCCcccccEEEecC
Q 022418          261 LYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdg  280 (297)
                      +.++..+.  ..|+++++.|
T Consensus       197 ~~~l~~~~--~~g~~~~~~~  214 (224)
T 3h2s_A          197 LDQLEHPT--AIRDRIVVRD  214 (224)
T ss_dssp             HHHHHSCC--CTTSEEEEEE
T ss_pred             HHHhcCcc--ccCCEEEEec
Confidence            99997753  4688888754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=1.1e-21  Score=175.90  Aligned_cols=228  Identities=18%  Similarity=0.163  Sum_probs=158.1

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNG-------AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ....+++|+++||||+|+||++++++|+++|       ++|++++|+.+....   ....++.++.+|++|++++.++++
T Consensus         8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A            8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHHh
Confidence            4456889999999999999999999999999       899999998653221   123467889999999999888775


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccC-C-
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGG-L-  177 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~-~-  177 (297)
                            +++|+|||+||...       ..+.+++++.+++|+.++..+++++.+...+. ..+++|++||.....+. + 
T Consensus        85 ------~~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           85 ------ARPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             ------TCCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             ------cCCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence                  37999999999651       12456788999999999999999987743211 14789999998654332 1 


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEe--CCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC
Q 022418          178 ---------AQHTYSVSKSAIIGLVKSMAAEL--CEYGIRINCIS--PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG  244 (297)
Q Consensus       178 ---------~~~~Y~~sK~a~~~~~~~la~el--~~~~i~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
                               +...|+.+|++.|.+++.++.+.  ....+|++.+.  ||.+.++... ....        .......+..
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~~~~--------~~~~~~~~~~  222 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-FFSN--------ILREPLVGQE  222 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-HHHH--------HHHHHHTTCC
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-HHHH--------HHHHHhcCCC
Confidence                     56789999999999999888762  11234555555  6665554211 1111        0111111110


Q ss_pred             ---C----CCCCCCCHHHHHHHHHHHhcCCCC-cccccEEEecC
Q 022418          245 ---V----LEGTHCEPNDIANAALYLASDDAK-YVSGHNLVVDG  280 (297)
Q Consensus       245 ---~----~~~~~~~~~dia~~~~~l~~~~~~-~~tG~~i~vdg  280 (297)
                         +    ....+++++|+|++++.++..... ...|+++++.|
T Consensus       223 ~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          223 AVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             EEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             eeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence               0    101257899999999999865421 11467888843

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=4.7e-23  Score=184.51  Aligned_cols=221  Identities=16%  Similarity=0.181  Sum_probs=147.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT--AKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~--~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..+..  ...+  ..++.++.+|++|++++.++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            68999999999999999999999999999988876532111  1111  2467889999999988877765       57


Q ss_pred             cEEEECccCCCCCCCccCCCCHHH-HHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC------------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEV-FDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG------------  176 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~------------  176 (297)
                      |+|||+|+...     .   ..++ .++.+++|+.++.++++++.+..   +.+++|++||..+..+.            
T Consensus        82 D~Vih~A~~~~-----~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           82 DFVFHVATPVH-----F---ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             SEEEEESSCCC-----C------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CEEEEeCCccC-----C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence            99999998541     1   1122 24589999999999999987642   24689999997643210            


Q ss_pred             ---------C---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHH----HHh---hcCCCHHHHH
Q 022418          177 ---------L---AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEM----SQI---YAGVDASRLL  237 (297)
Q Consensus       177 ---------~---~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~----~~~---~~~~~~~~~~  237 (297)
                               +   ....|+.||.+.|.+++.++.+   .|+++++++||.+++|......    ...   ..+ ... ..
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g-~~~-~~  225 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITG-NEF-LI  225 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHT-CHH-HH
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC-Ccc-cc
Confidence                     0   1125999999999998887765   5899999999999998653211    100   000 000 00


Q ss_pred             HHHHhc--CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEec
Q 022418          238 ELVYST--GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVD  279 (297)
Q Consensus       238 ~~~~~~--~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vd  279 (297)
                      ......  ......+++++|+|++++++++..  ..+|..+..+
T Consensus       226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~  267 (338)
T 2rh8_A          226 NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYICCA  267 (338)
T ss_dssp             HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEECS
T ss_pred             ccccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEEec
Confidence            000000  000015889999999999999653  2355543333

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=3.3e-22  Score=216.32  Aligned_cols=176  Identities=16%  Similarity=0.149  Sum_probs=139.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhH---HHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLG---QQTAKE---LGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~---~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+|+++||||++|||+++|++|+++|++ |++++|+..+.   .+..++   .+.++.++.||++|+++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999997 88889986543   222332   36678899999999999999999987 4


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++|+||||||+.  ....+.+.+.++|++.+++|+.+++++.+++.+.+.+  .++||++||..+..+.+.+..|+++
T Consensus      1962 ~g~id~lVnnAgv~--~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVL--RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcC--CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHH
Confidence            78999999999987  4566888999999999999999999999999998854  3899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccC
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPT  217 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t  217 (297)
                      |+++++|++..+.+    |....++.+|.+..
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCBCT
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCcCC
Confidence            99999999987654    77888888877643

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.87  E-value=2.8e-22  Score=177.33  Aligned_cols=221  Identities=12%  Similarity=0.100  Sum_probs=159.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +|+++||||+|+||++++++|+++  |++|++++|+....+ ..    ..+.++.+|++|++++.++++..     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVH-----KITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHT-----TCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhc-----CCCE
Confidence            478999999999999999999999  899999999876532 11    24678899999999998888754     7899


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------CCCC
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------GLAQ  179 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------~~~~  179 (297)
                      |||+||...  .     ...+++++.+++|+.++.++++++.+    .+.+++|++||.....+            ..+.
T Consensus        72 vih~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           72 IYLMAALLS--A-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             EEECCCCCH--H-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             EEECCccCC--C-----chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            999999651  1     12356788999999999999999865    34568999999765432            1235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH-hc------CCCCCCCCC
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY-ST------GVLEGTHCE  252 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~  252 (297)
                      ..|+.+|.+.|.+++.++.+   .|++++.++|+.+.++........  .......+..... +.      ......+++
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNI---YGVDVRSIRYPGLISWSTPPGGGT--TDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCEEECEEECEEECSSSCCCSCT--TTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHh---cCCcEEEEeCCeEecCCCCCCCch--hhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            68999999999999998877   489999999999998542100000  0000001111111 11      112245688


Q ss_pred             HHHHHHHHHHHhcCCCCcc-cccEEEecC
Q 022418          253 PNDIANAALYLASDDAKYV-SGHNLVVDG  280 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~~~~-tG~~i~vdg  280 (297)
                      ++|+|++++.+++...... .|+++++.|
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            9999999999997653322 258899875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=2.5e-22  Score=195.55  Aligned_cols=229  Identities=16%  Similarity=0.158  Sum_probs=163.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH-HHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD-VSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~~~~~~g~  108 (297)
                      .+++|+++||||+|+||++++++|+++ |++|++++|+.+..+....  ..++.++.+|++|.++ +.++++       +
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~-------~  382 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------K  382 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhc-------C
Confidence            357899999999999999999999998 8999999998765433211  3468899999999765 555554       5


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG------------  176 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~------------  176 (297)
                      +|+|||+||...  .    ....+++.+.+++|+.++..+++++.+.    + .++|++||.......            
T Consensus       383 ~D~Vih~Aa~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T 1z7e_A          383 CDVVLPLVAIAT--P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSNL  451 (660)
T ss_dssp             CSEEEECCCCCC--T----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTCCE
T ss_pred             CCEEEECceecC--c----cccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCcccc
Confidence            799999999652  1    1123567889999999999999998762    3 789999997654211            


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhc-----
Q 022418          177 ------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYST-----  243 (297)
Q Consensus       177 ------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~-----  243 (297)
                            .+...|+.+|.+.|.+++.++.+   .|++++.++||.++++..........  .............+.     
T Consensus       452 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  528 (660)
T 1z7e_A          452 IVGPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI  528 (660)
T ss_dssp             EECCTTCTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEE
T ss_pred             ccCcccCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEe
Confidence                  12236999999999999999877   48999999999999986432100000  000011111111111     


Q ss_pred             --CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          244 --GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       244 --~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                        ......+++++|+|++++.+++......+|+++++++|.
T Consensus       529 g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          529 DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence              111235788999999999999765444679999999985

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.87  E-value=6.5e-23  Score=184.14  Aligned_cols=223  Identities=16%  Similarity=0.156  Sum_probs=154.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+...........  ..++.++.+|+++..            +.
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~   90 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YI   90 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hc
Confidence            4577899999999999999999999999999999999754222111111  346888999998852            35


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-------------
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-------------  174 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-------------  174 (297)
                      ++|+|||+||...  ...    ..+++++.+++|+.++..+++++.+.    + .++|++||.....             
T Consensus        91 ~~d~vih~A~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           91 EVDQIYHLASPAS--PPN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             CCSEEEECCSCCS--HHH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             CCCEEEECccccC--chh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccc
Confidence            7999999999652  110    11245678999999999999998763    2 4899999975431             


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------C
Q 022418          175 ---GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------G  244 (297)
Q Consensus       175 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  244 (297)
                         +..+...|+.+|.+.|.+++.++.+   .|++++.++||.++++.........    ....+.....+.       .
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  232 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGRV----VSNFILQALQGEPLTVYGSG  232 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCCH----HHHHHHHHHHTCCEEEESSS
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCcEEEEEEcceeCcCCCCCcccH----HHHHHHHHHcCCCceEcCCC
Confidence               2223457999999999999998877   4899999999999998532100000    001111111111       1


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .....+++++|+|++++.++...    .|+.+++.+|.....
T Consensus       233 ~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s~  270 (343)
T 2b69_A          233 SQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHTI  270 (343)
T ss_dssp             CCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             CeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCcH
Confidence            11235789999999999998754    267899988876543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.87  E-value=6.4e-23  Score=182.29  Aligned_cols=212  Identities=15%  Similarity=0.122  Sum_probs=156.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||||+|+||++++++|+++|++|++++|+.                 .+|++|.+++.++++..     ++|+|
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~-----~~d~v   59 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLDSRAVHDFFASE-----RIDQV   59 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------cCCccCHHHHHHHHHhc-----CCCEE
Confidence            358999999999999999999999999999988763                 26999999998888765     79999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------------CC
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------------GL  177 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------------~~  177 (297)
                      ||+||...  .   .+...+++.+.+++|+.++..+++++.+    .+..++|++||......               ..
T Consensus        60 ih~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  130 (321)
T 1e6u_A           60 YLAAAKVG--G---IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  130 (321)
T ss_dssp             EECCCCCC--C---HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEcCeecC--C---cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence            99998652  1   1123456688999999999999999876    23468999999765421               11


Q ss_pred             C-CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh------hHHHHhhcCCCHHHHHHHHH---------
Q 022418          178 A-QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVY---------  241 (297)
Q Consensus       178 ~-~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~---------  241 (297)
                      + ...|+.+|.+.|.+++.++.+   .|++++.++||.++++...      .....        .+.....         
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~  199 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMPTNLYGPHDNFHPSNSHVIPA--------LLRRFHEATAQKAPDV  199 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEESTTCCCCTTCSSHHHH--------HHHHHHHHHHHTCSEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEEeCCcCCcCCCCCCCCCccHHH--------HHHHHHHhhhcCCCce
Confidence            2 258999999999999999877   4899999999999997543      11111        1111111         


Q ss_pred             ---hcCCCCCCCCCHHHHHHHHHHHhcCCCCc------ccccEEEecCCccccc
Q 022418          242 ---STGVLEGTHCEPNDIANAALYLASDDAKY------VSGHNLVVDGGFTSFK  286 (297)
Q Consensus       242 ---~~~~~~~~~~~~~dia~~~~~l~~~~~~~------~tG~~i~vdgG~~~~~  286 (297)
                         +.......+++++|+|++++.++......      ..|+++++.+|.....
T Consensus       200 ~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  253 (321)
T 1e6u_A          200 VVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTI  253 (321)
T ss_dssp             EEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEH
T ss_pred             EEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccH
Confidence               11112235789999999999998765221      2378999988765443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=6e-23  Score=171.98  Aligned_cols=201  Identities=14%  Similarity=0.077  Sum_probs=150.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .+|+++||||+|+||++++++|+++|+  +|++++|+.+.       ...++.++.+|++|++++.+++         +|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~~~~~~~~~---------~d   67 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGS---------ID   67 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSC---------CS
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------cCCCceEEeccccCHHHHHHhh---------hc
Confidence            568999999999999999999999998  99999998765       1346788899999887765544         89


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++||+||...  .      +.+++++.+++|+.++..+++++.+    .+.+++|++||.....+  +...|+.+|.+.|
T Consensus        68 ~vi~~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e  133 (215)
T 2a35_A           68 TAFCCLGTTI--K------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELE  133 (215)
T ss_dssp             EEEECCCCCH--H------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             EEEECeeecc--c------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence            9999999651  1      2345788999999999999999866    34568999999876543  3468999999999


Q ss_pred             HHHHHHHHHHccCCcE-EEEEeCCCccCcchhh-HHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCEYGIR-INCISPFAIPTPFVME-EMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~~~i~-v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .+++.       .|++ ++.++||.++++.... .......... .    ...+    ...+++++|+|+++..++..+.
T Consensus       134 ~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~-~----~~~~----~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          134 QALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIA-R----ILPG----KYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC---------C----HHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhh-h----ccCC----CcCcEeHHHHHHHHHHHHhcCC
Confidence            88764       3898 9999999999985431 1111110000 0    0000    1345789999999999997762


Q ss_pred             CcccccEEEecCCcc
Q 022418          269 KYVSGHNLVVDGGFT  283 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~  283 (297)
                          ++.+++.++..
T Consensus       198 ----~~~~~i~~~~~  208 (215)
T 2a35_A          198 ----KGVRFVESDEL  208 (215)
T ss_dssp             ----SEEEEEEHHHH
T ss_pred             ----CCceEEcHHHH
Confidence                67888877654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.86  E-value=4.7e-23  Score=180.36  Aligned_cols=199  Identities=16%  Similarity=0.040  Sum_probs=149.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+++|++|++++|.                  .+|++|++++.++++..     ++|+|||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~D~~d~~~~~~~~~~~-----~~d~vi~   62 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------LLDITNISQVQQVVQEI-----RPHIIIH   62 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------TSCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------ccCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            389999999999999999999999999999992                  37999999999988866     7999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  183 (297)
                      +||...  .    +.+.+++++.+++|+.++..+++++.+.    + .++|++||.....+           ..+...|+
T Consensus        63 ~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  131 (287)
T 3sc6_A           63 CAAYTK--V----DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYG  131 (287)
T ss_dssp             CCCCCC--H----HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHH
T ss_pred             CCcccC--h----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHH
Confidence            999762  1    1122467889999999999999998763    2 47999999765422           22356899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-----CCCCCCCCCHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIAN  258 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dia~  258 (297)
                      .+|.+.|.+++.++.       +++.++|+.++++..........        .....+.     ......+++++|+|+
T Consensus       132 ~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~v~Dva~  196 (287)
T 3sc6_A          132 ASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMI--------RLGKEREEISVVADQIGSPTYVADLNV  196 (287)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHH--------HHHTTCSEEEEECSCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHH--------HHHHcCCCeEeecCcccCceEHHHHHH
Confidence            999999999887643       46899999999875433322111        0000000     012246788999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      ++.++++...    ++++++.+|.....
T Consensus       197 ~~~~~~~~~~----~~~~~i~~~~~~s~  220 (287)
T 3sc6_A          197 MINKLIHTSL----YGTYHVSNTGSCSW  220 (287)
T ss_dssp             HHHHHHTSCC----CEEEECCCBSCEEH
T ss_pred             HHHHHHhCCC----CCeEEEcCCCcccH
Confidence            9999998763    67999988875543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.85  E-value=1.8e-21  Score=190.61  Aligned_cols=241  Identities=14%  Similarity=0.084  Sum_probs=161.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH----HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ----QTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .+++++|++|||||+|+||++++++|+++|++|++++|+.....    .........+.++.+|+++++++.++++..  
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY--   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC--
Confidence            45688999999999999999999999999999999998764322    221112457888999999999998887753  


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------  175 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------  175 (297)
                         ++|+|||+||...  ..    ...+...+.+++|+.++..+++++..    .+.+++|++||......         
T Consensus        84 ---~~D~Vih~A~~~~--~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~  150 (699)
T 1z45_A           84 ---KIDSVIHFAGLKA--VG----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIP  150 (699)
T ss_dssp             ---CCCEEEECCSCCC--HH----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             ---CCCEEEECCcccC--cC----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCC
Confidence               7999999999652  11    12234567899999999999888755    24578999999764321         


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh---cCCCHHHHHHHHHh----
Q 022418          176 ------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY---AGVDASRLLELVYS----  242 (297)
Q Consensus       176 ------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~----  242 (297)
                            ..+...|+.+|++.|.+++.++.+. ..+++++.++|+.+.++.....+....   .......+......    
T Consensus       151 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  229 (699)
T 1z45_A          151 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREK  229 (699)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSC
T ss_pred             ccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCc
Confidence                  1234689999999999999988775 358999999999888763210000000   00000011111111    


Q ss_pred             -----------cCCCCCCCCCHHHHHHHHHHHhcCC----CCcccccEEEecCCcccc
Q 022418          243 -----------TGVLEGTHCEPNDIANAALYLASDD----AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       243 -----------~~~~~~~~~~~~dia~~~~~l~~~~----~~~~tG~~i~vdgG~~~~  285 (297)
                                 .......+++++|+|++++.++...    .....|+++++.+|....
T Consensus       230 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s  287 (699)
T 1z45_A          230 LYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST  287 (699)
T ss_dssp             CCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE
T ss_pred             eEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCc
Confidence                       0111135688999999999887521    011246789998887544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.85  E-value=3.1e-21  Score=167.34  Aligned_cols=197  Identities=17%  Similarity=0.065  Sum_probs=145.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|++ |++|++++|+.+..        ..   +.+|++|++++.++++..     ++|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~--------~~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ--------GG---YKLDLTDFPRLEDFIIKK-----RPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT--------TC---EECCTTSHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC--------CC---ceeccCCHHHHHHHHHhc-----CCCEEEE
Confidence            4699999999999999999994 89999999987521        11   789999999999988865     7999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC----------CCccchh
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL----------AQHTYSV  184 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~----------~~~~Y~~  184 (297)
                      |||...  .    +.+.+++++.+++|+.++..+++++.+    .+ +++|++||.....+.+          +...|+.
T Consensus        64 ~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~  132 (273)
T 2ggs_A           64 AAAMTD--V----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGL  132 (273)
T ss_dssp             CCCCCC--H----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHH
T ss_pred             CCcccC--h----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHH
Confidence            999652  1    233567889999999999999999875    23 5899999988754432          3568999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccC--cchhhHHHHhhcCCCHHHHHHHHHhcC----CCCCCCCCHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPT--PFVMEEMSQIYAGVDASRLLELVYSTG----VLEGTHCEPNDIAN  258 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dia~  258 (297)
                      +|++.|.+++.         +....++|+.+.+  ++.......            ...+..    ....++++++|+|+
T Consensus       133 sK~~~e~~~~~---------~~~~~iR~~~v~G~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~dva~  191 (273)
T 2ggs_A          133 SKLLGETFALQ---------DDSLIIRTSGIFRNKGFPIYVYKT------------LKEGKTVFAFKGYYSPISARKLAS  191 (273)
T ss_dssp             HHHHHHHHHCC---------TTCEEEEECCCBSSSSHHHHHHHH------------HHTTCCEEEESCEECCCBHHHHHH
T ss_pred             HHHHHHHHHhC---------CCeEEEeccccccccHHHHHHHHH------------HHcCCCEEeecCCCCceEHHHHHH
Confidence            99999998877         2345677777764  221111110            001100    00256899999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.++++...   +| +++++| ....
T Consensus       192 ~i~~~~~~~~---~g-~~~i~~-~~~s  213 (273)
T 2ggs_A          192 AILELLELRK---TG-IIHVAG-ERIS  213 (273)
T ss_dssp             HHHHHHHHTC---CE-EEECCC-CCEE
T ss_pred             HHHHHHhcCc---CC-eEEECC-Cccc
Confidence            9999997652   45 889988 5544

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.85  E-value=2.8e-21  Score=168.92  Aligned_cols=205  Identities=11%  Similarity=0.053  Sum_probs=150.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      |+++||||||+||++++++|+++  |++|++++|+.++.+....   ..+.++.+|++|++++.++++       ++|++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~~d~v   70 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFA-------GVSKL   70 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHh-------cCCEE
Confidence            57999999999999999999999  9999999999876655433   357889999999998887765       58999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      ||+||..  .       . +      ++|+.++.++++++..    .+..++|++||.... ..  ...|+.+|.+.|.+
T Consensus        71 i~~a~~~--~-------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~~--~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           71 LFISGPH--Y-------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE-ES--IIPLAHVHLATEYA  127 (287)
T ss_dssp             EECCCCC--S-------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG-GC--CSTHHHHHHHHHHH
T ss_pred             EEcCCCC--c-------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-CC--CCchHHHHHHHHHH
Confidence            9999853  1       1 1      5788899998888855    345689999998764 22  24899999999988


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCccc
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVS  272 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~t  272 (297)
                      ++.       .|++++.++||.+.++.....+......   .   ............+++++|+|+++..+++.+.  .+
T Consensus       128 ~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  192 (287)
T 2jl1_A          128 IRT-------TNIPYTFLRNALYTDFFVNEGLRASTES---G---AIVTNAGSGIVNSVTRNELALAAATVLTEEG--HE  192 (287)
T ss_dssp             HHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHH---T---EEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CT
T ss_pred             HHH-------cCCCeEEEECCEeccccchhhHHHHhhC---C---ceeccCCCCccCccCHHHHHHHHHHHhcCCC--CC
Confidence            752       6899999999998775422111110000   0   0000111122568899999999999997642  47


Q ss_pred             ccEEEecCCcccccC
Q 022418          273 GHNLVVDGGFTSFKN  287 (297)
Q Consensus       273 G~~i~vdgG~~~~~~  287 (297)
                      |+.++++||......
T Consensus       193 g~~~~i~~~~~~s~~  207 (287)
T 2jl1_A          193 NKTYNLVSNQPWTFD  207 (287)
T ss_dssp             TEEEEECCSSCBCHH
T ss_pred             CcEEEecCCCcCCHH
Confidence            899999999665443

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=1.7e-21  Score=172.74  Aligned_cols=217  Identities=16%  Similarity=0.158  Sum_probs=154.6

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           36 VALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ++|||||+|+||++++++|+++  |++|++++|+....+        .+.++.+|++|++++.++++..     ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~-----~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKY-----SIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHT-----TCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhc-----CCcEEE
Confidence            4899999999999999999999  899999998765422        4678899999999998888752     799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC------------CCCcc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG------------LAQHT  181 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~------------~~~~~  181 (297)
                      |+||...  .     .+.+++++.+++|+.++.++++++.+    .+.+++|++||.....+.            .+...
T Consensus        68 h~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           68 HLAGILS--A-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             ECCCCCH--H-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             ECCcccC--C-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            9999651  1     12356788999999999999999875    345689999998765332            13578


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------CCCCCCCCCHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------GVLEGTHCEPN  254 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  254 (297)
                      |+.+|.+.|.+++.++.+   .|++++.++|+.+.++........  .......+.......       ......+++++
T Consensus       137 Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGT--TDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCS--STHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcc--hhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            999999999999988776   589999999777666421100000  000000111111110       01123467899


Q ss_pred             HHHHHHHHHhcCCC-CcccccEEEecCC
Q 022418          255 DIANAALYLASDDA-KYVSGHNLVVDGG  281 (297)
Q Consensus       255 dia~~~~~l~~~~~-~~~tG~~i~vdgG  281 (297)
                      |+|++++.++.... ...+|+.++++|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            99999999887542 2335789999864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.85  E-value=5.8e-22  Score=174.35  Aligned_cols=207  Identities=12%  Similarity=0.009  Sum_probs=150.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++||||+|+||++++++|+ +|++|++++|+..              .+.+|++|++++.++++..     ++|++||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~-----~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------EFCGDFSNPKGVAETVRKL-----RPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------cccccCCCHHHHHHHHHhc-----CCCEEEE
Confidence            479999999999999999999 8999999999762              3568999999998888764     6899999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~  183 (297)
                      +||...  .    +.+.+++++.+++|+.++.++++++.+    .+ .++|++||.....+.           .+...|+
T Consensus        61 ~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  129 (299)
T 1n2s_A           61 AAAHTA--V----DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (299)
T ss_dssp             CCCCCC--H----HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             CcccCC--H----hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHH
Confidence            999652  1    112245678899999999999998843    23 489999997654321           2356899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-----CCCCCCCCCHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-----GVLEGTHCEPNDIAN  258 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dia~  258 (297)
                      .+|.+.|.+++.++.       +++.++|+.++++.........        ......+.     ......+++++|+|+
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~  194 (299)
T 1n2s_A          130 KTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTM--------LRLAKERQTLSVINDQYGAPTGAELLAD  194 (299)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHH--------HHHHHHCSEEEEECSCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHH--------HHHHhcCCCEEeecCcccCCeeHHHHHH
Confidence            999999999887632       7899999999998543222111        11111110     011245678999999


Q ss_pred             HHHHHhcCCCCcc-cccEEEecCCcccccC
Q 022418          259 AALYLASDDAKYV-SGHNLVVDGGFTSFKN  287 (297)
Q Consensus       259 ~~~~l~~~~~~~~-tG~~i~vdgG~~~~~~  287 (297)
                      ++..+++...... .|+.+++.+|......
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (299)
T 1n2s_A          195 CTAHAIRVALNKPEVAGLYHLVAGGTTTWH  224 (299)
T ss_dssp             HHHHHHHHHHHCGGGCEEEECCCBSCEEHH
T ss_pred             HHHHHHHHhccccccCceEEEeCCCCCCHH
Confidence            9999986542122 5889999998765443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.85  E-value=6.7e-23  Score=181.09  Aligned_cols=224  Identities=13%  Similarity=0.050  Sum_probs=154.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .+++|++|||||+|+||++++++|+++|+      +....        ...+..+.+|++|++++.++++..     ++|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~-----~~d   63 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------WVFVSSKDADLTDTAQTRALFEKV-----QPT   63 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------EEECCTTTCCTTSHHHHHHHHHHS-----CCS
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------ccccCceecccCCHHHHHHHHhhc-----CCC
Confidence            46789999999999999999999999998      11100        012334578999999999888753     699


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------------  175 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------------  175 (297)
                      +|||+|+...  .   ...+.+++.+.+++|+.++.++++++..    .+..++|++||......               
T Consensus        64 ~Vih~A~~~~--~---~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  134 (319)
T 4b8w_A           64 HVIHLAAMVG--G---LFRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIHNGP  134 (319)
T ss_dssp             EEEECCCCCC--C---HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGGBSC
T ss_pred             EEEECceecc--c---ccccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccccccCC
Confidence            9999999752  1   1112344577899999999999999865    23468999999754321               


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHH----HHHhc-------
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE----LVYST-------  243 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~-------  243 (297)
                       .+....|+.+|.+.|.+++.++.+   .|++++.++|+.+.++........  .......+..    ...+.       
T Consensus       135 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          135 PHNSNFGYSYAKRMIDVQNRAYFQQ---YGCTFTAVIPTNVFGPHDNFNIED--GHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCCCTTT--SCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHh---hCCCEEEEeeccccCCCCCCCCcc--ccccHHHHHHHHHHhccCCceEEeCC
Confidence             112225999999999999999887   489999999999999864310000  0000011111    11111       


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          244 GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       244 ~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ......+++++|+|++++.++..... ..|+++++.+|......+
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~s~~e  253 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEVSIKE  253 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCEEHHH
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCceeHHH
Confidence            11223568999999999999876422 467899998877655443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.84  E-value=5.9e-22  Score=173.46  Aligned_cols=209  Identities=13%  Similarity=0.043  Sum_probs=153.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++||| +|+||++++++|+++|++|++++|+.+.+       ...+.++.+|++|++++.++++      +++|+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~v   67 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------PAGVQTLIADVTRPDTLASIVH------LRPEIL   67 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------CTTCCEEECCTTCGGGCTTGGG------GCCSEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccCCceEEccCCChHHHHHhhc------CCCCEE
Confidence            457999999 59999999999999999999999987652       3578899999999998877665      369999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCcc
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHT  181 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~  181 (297)
                      ||+||..           ..++...+++|+.++..+++++.    +.+..++|++||......           ..+...
T Consensus        68 ih~a~~~-----------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (286)
T 3gpi_A           68 VYCVAAS-----------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF  132 (286)
T ss_dssp             EECHHHH-----------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH
T ss_pred             EEeCCCC-----------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh
Confidence            9999853           23457788999999999888874    344578999999765321           223568


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+.+|.+.|.+ +..        ++++.++|+.++++...........  . .     ..........+++++|+|+++.
T Consensus       133 Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~--~-~-----~~~~~~~~~~~i~v~Dva~~~~  195 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT--P-E-----QWPARNAWTNRIHRDDGAAFIA  195 (286)
T ss_dssp             HHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC--G-G-----GSCSSBCEECEEEHHHHHHHHH
T ss_pred             hhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh--c-c-----cCCCcCceeEEEEHHHHHHHHH
Confidence            99999999887 442        7899999999999876544333211  0 0     0112222356789999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      .++........|+++++.+|......
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          196 YLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             HHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             HHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99976422357899999988765443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=1.1e-22  Score=180.39  Aligned_cols=213  Identities=15%  Similarity=0.097  Sum_probs=147.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~----~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++.+|+++||||||+||++++++|+++|++|++++|+...    .+...... ...+.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            4668999999999999999999999999999999997751    11110000 123455555654               


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------  175 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------  175 (297)
                        ++|+|||+||...  ..    ...++....++ |+.++..+++++...    +..++|++||......          
T Consensus        69 --~~d~vi~~a~~~~--~~----~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~  135 (321)
T 3vps_A           69 --DVRLVYHLASHKS--VP----RSFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDS  135 (321)
T ss_dssp             --TEEEEEECCCCCC--HH----HHTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             --cCCEEEECCccCC--hH----HHHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCC
Confidence              6899999999762  11    01112234556 999999999998663    3468999999765422          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCc-EEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHhc-------C
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGI-RINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYST-------G  244 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i-~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~  244 (297)
                       ..+...|+.+|.+.|.+++.++.+   .++ +++.++|+.+.++....  ...        ........+.       .
T Consensus       136 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  204 (321)
T 3vps_A          136 PLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVP--------RLCANLLTRNELPVEGDG  204 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHH--------HHHHHHHHHSEEEEETTS
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHH--------HHHHHHHcCCCeEEeCCC
Confidence             123568999999999999999877   689 99999999999976432  111        1111111111       1


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          245 VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .....+++++|+|++++.++.....   | ++++.+|.....
T Consensus       205 ~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~s~  242 (321)
T 3vps_A          205 EQRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQSLSV  242 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCCEEH
T ss_pred             CceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCcccH
Confidence            1224578999999999999987643   7 999999876543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.7e-20  Score=175.93  Aligned_cols=229  Identities=11%  Similarity=0.038  Sum_probs=158.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHC---CCeEEEEeCCchhHHHHH------------------HHhCCCeeEEEec
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISN---GAKVVIADIQHQLGQQTA------------------KELGPNATFIACD   88 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~---G~~Vi~~~r~~~~~~~~~------------------~~~~~~v~~~~~D   88 (297)
                      ...++|+|+||||+|+||++++++|+++   |++|++++|+.+......                  .....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4578999999999999999999999999   999999999876432211                  1123579999999


Q ss_pred             CC------CHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc
Q 022418           89 VT------KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG  162 (297)
Q Consensus        89 ~s------~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g  162 (297)
                      ++      +.+.+.++++       ++|+|||+||...  .        +.+.+.+++|+.++..+++++..    .+..
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~--~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~  207 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN--A--------FPYHELFGPNVAGTAELIRIALT----TKLK  207 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS--B--------SSCCEEHHHHHHHHHHHHHHHTS----SSCC
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccC--C--------cCHHHHHHHHHHHHHHHHHHHHh----CCCC
Confidence            99      5556666655       5899999999762  1        22356789999999999998754    3446


Q ss_pred             eEEEEecccccccCCC----------------------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch
Q 022418          163 CILCTASVTGLLGGLA----------------------QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV  220 (297)
Q Consensus       163 ~iv~vss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~  220 (297)
                      ++|++||.........                      ...|+.+|.+.|.+++.++.+   .|+++++++||.|.++..
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDL---CALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECCSS
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHH---hCCCeEEEECceeeCCCc
Confidence            8999999654322110                      134999999999999999876   489999999999988632


Q ss_pred             hhHHHHhhcCCCHHHHHHHHH-hcCC--------------CCCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCCcc
Q 022418          221 MEEMSQIYAGVDASRLLELVY-STGV--------------LEGTHCEPNDIANAALYLASDD--AKYVSGHNLVVDGGFT  283 (297)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~~~dia~~~~~l~~~~--~~~~tG~~i~vdgG~~  283 (297)
                      ...... ...+.......... +..+              ....+++++|+|++++.++...  .....|+++++.++..
T Consensus       285 ~~g~~~-~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          285 YAGQLN-MSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SSSCCC-TTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             cCCcCC-HHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            100000 00000011111111 1111              1135689999999999998641  1224688999988765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.83  E-value=1.2e-20  Score=164.68  Aligned_cols=200  Identities=13%  Similarity=0.072  Sum_probs=142.4

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           36 VALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++||||+|+||++++++|+++  |++|++++|+.+..+....   ..+.++.+|++|++++.++++       ++|++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~d~vi   70 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQ-------GVEKLL   70 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            4899999999999999999998  9999999999876655433   357889999999998887765       589999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      |+||..  .                +.|+.++..+++++..    .+.+++|++||.... +  ....|+.+|.+.|.++
T Consensus        71 ~~a~~~--~----------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           71 LISSSE--V----------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD-T--SPLGLADEHIETEKML  125 (286)
T ss_dssp             ECC--------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT-T--CCSTTHHHHHHHHHHH
T ss_pred             EeCCCC--c----------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-C--CcchhHHHHHHHHHHH
Confidence            999843  1                0266777777777654    245689999998765 2  2248999999999887


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccc
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSG  273 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG  273 (297)
                      +.       .|++++.++||++.++.... ..+...   ..   ............+++++|+|+++..+++.+.  .+|
T Consensus       126 ~~-------~~~~~~ilrp~~~~~~~~~~-~~~~~~---~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  189 (286)
T 2zcu_A          126 AD-------SGIVYTLLRNGWYSENYLAS-APAALE---HG---VFIGAAGDGKIASATRADYAAAAARVISEAG--HEG  189 (286)
T ss_dssp             HH-------HCSEEEEEEECCBHHHHHTT-HHHHHH---HT---EEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTT
T ss_pred             HH-------cCCCeEEEeChHHhhhhHHH-hHHhhc---CC---ceeccCCCCccccccHHHHHHHHHHHhcCCC--CCC
Confidence            53       48999999999987654311 110000   00   0000111123568899999999999997643  379


Q ss_pred             cEEEecCCccccc
Q 022418          274 HNLVVDGGFTSFK  286 (297)
Q Consensus       274 ~~i~vdgG~~~~~  286 (297)
                      +.++++||.....
T Consensus       190 ~~~~i~~~~~~s~  202 (286)
T 2zcu_A          190 KVYELAGDSAWTL  202 (286)
T ss_dssp             CEEEECCSSCBCH
T ss_pred             ceEEEeCCCcCCH
Confidence            9999999865543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.82  E-value=2.5e-20  Score=176.16  Aligned_cols=224  Identities=13%  Similarity=0.083  Sum_probs=158.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH---HH------------HHHhCCCeeEEEecCCCHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQ---QT------------AKELGPNATFIACDVTKESDVSD   97 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~------------~~~~~~~v~~~~~D~s~~~~i~~   97 (297)
                      ..|+|+||||||+||++++++|.+.|++|++++|+.+...   ..            ......++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            3589999999999999999999999999999999887321   11            1122568999999999988776 


Q ss_pred             HHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc--cc-
Q 022418           98 AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG--LL-  174 (297)
Q Consensus        98 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~--~~-  174 (297)
                             ...++|+|||+|+...         ....+...+++|+.++.++++++.+     ...++|++||...  .. 
T Consensus       228 -------~~~~~D~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFD  286 (508)
T ss_dssp             -------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEEC
T ss_pred             -------CccCCCEEEECCceec---------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCc
Confidence                   3358999999999652         1245677889999999999999865     3468999999876  10 


Q ss_pred             ---------------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHH
Q 022418          175 ---------------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLEL  239 (297)
Q Consensus       175 ---------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  239 (297)
                                     +..+...|+.+|.+.|.+++.++.    .|++++.++||.|.++.....+..   ......+...
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~  359 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMR---NIKTNRFSMV  359 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCT---TCTTCHHHHH
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccC---CcchHHHHHH
Confidence                           012456899999999999988643    589999999999998754321000   0000001111


Q ss_pred             HHhc---C-------CCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          240 VYST---G-------VLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       240 ~~~~---~-------~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ....   .       .....+++++|+|++++.++....   .|+++++.+|....-.+
T Consensus       360 i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~e  415 (508)
T 4f6l_B          360 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  415 (508)
T ss_dssp             HHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHHH
T ss_pred             HHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHHH
Confidence            1100   0       111347889999999999997653   78999999987665443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.79  E-value=1.9e-19  Score=157.66  Aligned_cols=201  Identities=12%  Similarity=0.079  Sum_probs=138.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+++||||||+||++++++|.+. |++|++++|+.++....   ....+.++.+|++|++++.++++       ++|+||
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~---~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi   70 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD---WRGKVSVRQLDYFNQESMVEAFK-------GMDTVV   70 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG---GBTTBEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh---hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            46999999999999999999998 99999999998764432   13568999999999998887775       689999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV  193 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  193 (297)
                      |+||...  .       .       ..|+.++..+++++..    .+.+++|++||......    ..|..++...    
T Consensus        71 ~~a~~~~--~-------~-------~~~~~~~~~l~~aa~~----~gv~~iv~~Ss~~~~~~----~~~~~~~~~~----  122 (289)
T 3e48_A           71 FIPSIIH--P-------S-------FKRIPEVENLVYAAKQ----SGVAHIIFIGYYADQHN----NPFHMSPYFG----  122 (289)
T ss_dssp             ECCCCCC--S-------H-------HHHHHHHHHHHHHHHH----TTCCEEEEEEESCCSTT----CCSTTHHHHH----
T ss_pred             EeCCCCc--c-------c-------hhhHHHHHHHHHHHHH----cCCCEEEEEcccCCCCC----CCCccchhHH----
Confidence            9998651  1       1       1255666666666543    45578999999654322    2344444221    


Q ss_pred             HHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHHhcCCCC
Q 022418          194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVL----EGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       194 ~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                       .....+...|++++.++||++.+++..... ..         .. ......+    ...+++++|+|+++..++.....
T Consensus       123 -~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~-~~---------~~-~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~  190 (289)
T 3e48_A          123 -YASRLLSTSGIDYTYVRMAMYMDPLKPYLP-EL---------MN-MHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT  190 (289)
T ss_dssp             -HHHHHHHHHCCEEEEEEECEESTTHHHHHH-HH---------HH-HTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG
T ss_pred             -HHHHHHHHcCCCEEEEeccccccccHHHHH-HH---------HH-CCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc
Confidence             222334456899999999999998543211 10         00 0000011    12378999999999999987643


Q ss_pred             cccccEEEecCCcccccCC
Q 022418          270 YVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~~~~  288 (297)
                        .|++++++ |..+...+
T Consensus       191 --~g~~~~~~-~~~~s~~e  206 (289)
T 3e48_A          191 --WGKRYLLS-GYSYDMKE  206 (289)
T ss_dssp             --TTCEEEEC-CEEEEHHH
T ss_pred             --CCceEEeC-CCcCCHHH
Confidence              38999999 77665443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.77  E-value=1.2e-18  Score=153.23  Aligned_cols=209  Identities=11%  Similarity=0.065  Sum_probs=140.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHH-HHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQ-TAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~-~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|+++||||||+||++++++|+++| ++|++++|+.++... ...  ...+.++.+|++|++++.++++       ++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR--LQGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH--HTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH--HCCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            5899999999999999999999999 999999998765431 111  2457889999999999888775       5899


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC---CCCccchhhHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG---LAQHTYSVSKSA  188 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~---~~~~~Y~~sK~a  188 (297)
                      +||++|...  .     .       ..+.|+.++..+++++..    .+.+++|++|+ .+..+.   .+...|+.+|.+
T Consensus        76 vi~~a~~~~--~-----~-------~~~~~~~~~~~~~~aa~~----~gv~~iv~~S~-~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           76 TFIVTNYWE--S-----C-------SQEQEVKQGKLLADLARR----LGLHYVVYSGL-ENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             EEECCCHHH--H-----T-------CHHHHHHHHHHHHHHHHH----HTCSEEEECCC-CCHHHHTTTSCCCHHHHHHHH
T ss_pred             EEEeCCCCc--c-----c-------cchHHHHHHHHHHHHHHH----cCCCEEEEEcC-ccccccCCCcccCchhhHHHH
Confidence            999998531  0     0       123455555555655543    34578998655 333321   224679999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      +|.+.+.       .|++++.++||.+.+++..........   .................+++++|+|+++..++..+.
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAP---DGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE  206 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECT---TSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccC---CCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh
Confidence            9988764       379999999999998754321111000   000000000000111357899999999999997542


Q ss_pred             CcccccEEEecCC
Q 022418          269 KYVSGHNLVVDGG  281 (297)
Q Consensus       269 ~~~tG~~i~vdgG  281 (297)
                      . ..|+.++++|.
T Consensus       207 ~-~~g~~~~~~g~  218 (299)
T 2wm3_A          207 K-YVGQNIGLSTC  218 (299)
T ss_dssp             H-HTTCEEECCSE
T ss_pred             h-hCCeEEEeeec
Confidence            2 36899999863

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.77  E-value=6.7e-19  Score=158.87  Aligned_cols=213  Identities=11%  Similarity=0.060  Sum_probs=141.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH-HHHHhCCCeeEEEec-CCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ-TAKELGPNATFIACD-VTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~v~~~~~D-~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++|+++||||||+||++++++|+++|++|++++|+.+.... .... ...+.++.+| ++|++++.++++       .+
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            346899999999999999999999999999999998876421 1111 2368889999 999999887765       57


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccc-ccccCCCCccchhhHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVT-GLLGGLAQHTYSVSKS  187 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~-~~~~~~~~~~Y~~sK~  187 (297)
                      |++|||++..  ..               +.|..+ .++++++..    .+ .+++|++||.. ...+..+...|+.+|.
T Consensus        75 d~Vi~~a~~~--~~---------------~~~~~~-~~l~~aa~~----~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A           75 HLAFINTTSQ--AG---------------DEIAIG-KDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             SEEEECCCST--TS---------------CHHHHH-HHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CEEEEcCCCC--Cc---------------HHHHHH-HHHHHHHHH----cCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence            9999999743  10               124444 555555543    33 47899999986 3444445578999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-C-CCHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHHHh
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-G-VDASRLLELVYSTGVLEGTHCEP-NDIANAALYLA  264 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~-~dia~~~~~l~  264 (297)
                      +.|.+++.       .|++++.|+||++.+....... .... . ...................++++ +|+|+++..++
T Consensus       133 ~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l  204 (352)
T 1xgk_A          133 TVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPY-PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  204 (352)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEEGGGCBSSSC-SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------cCCCEEEEecceecCCchhccc-ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence            99998865       3799999999976543321100 0000 0 00000000000000011346788 89999999999


Q ss_pred             cCCCCcccccEEEecCCc
Q 022418          265 SDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~  282 (297)
                      .+......|+++++.++.
T Consensus       205 ~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          205 KDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHCHHHHTTCEEEECSEE
T ss_pred             hCCchhhCCeEEEEecCC
Confidence            754334568999998653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.75  E-value=4.5e-19  Score=160.74  Aligned_cols=200  Identities=21%  Similarity=0.143  Sum_probs=144.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+++||||+|+||++++++|+++|+ +|+..+|+                      +|++++.++++       ++|++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d~~~l~~~~~-------~~d~Vi   51 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TKEEELESALL-------KADFIV   51 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CCHHHHHHHHH-------HCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CCHHHHHHHhc-------cCCEEE
Confidence            5799999999999999999999998 77777664                      67888888776       479999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCC-ceEEEEecccccccCCCCccchhhHHHHHHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGL  192 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  192 (297)
                      |+||...  .        +++...+++|+.++..+++++..    .+. .++|++||.....    ...|+.+|.+.|.+
T Consensus        52 h~a~~~~--~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~  113 (369)
T 3st7_A           52 HLAGVNR--P--------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ----DNPYGESKLQGEQL  113 (369)
T ss_dssp             ECCCSBC--T--------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHH
T ss_pred             ECCcCCC--C--------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC----CCCchHHHHHHHHH
Confidence            9999762  2        12345678899999999988743    333 3899999877654    46899999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC------CCCCCCCCHHHHHHHHHHHhcC
Q 022418          193 VKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG------VLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       193 ~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++.++++   .|++++.++|+.+.++.........    ..........+..      .....+++++|+|+++..++..
T Consensus       114 ~~~~~~~---~g~~~~i~R~~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  186 (369)
T 3st7_A          114 LREYAEE---YGNTVYIYRWPNLFGKWCKPNYNSV----IATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEG  186 (369)
T ss_dssp             HHHHHHH---HCCCEEEEEECEEECTTCCTTSSCH----HHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHH---hCCCEEEEECCceeCCCCCCCcchH----HHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhC
Confidence            9999887   5789999999999987543211000    0011111111110      1113467899999999999987


Q ss_pred             CCCcccccEEEecCCcccccCCC
Q 022418          267 DAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      ... ..|+.+++.+|......+.
T Consensus       187 ~~~-~~~~~~~i~~~~~~s~~e~  208 (369)
T 3st7_A          187 TPT-IENGVPTVPNVFKVTLGEI  208 (369)
T ss_dssp             CCC-EETTEECCSCCEEEEHHHH
T ss_pred             Ccc-cCCceEEeCCCCceeHHHH
Confidence            633 2489999998876654443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.74  E-value=1.2e-18  Score=152.23  Aligned_cols=200  Identities=8%  Similarity=-0.082  Sum_probs=139.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+++|||| |+||++++++|+++|++|++++|+.+..+....   ..+.++.+|++|.+            ..++|+|||
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~------------~~~~d~vi~   69 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS------------LDGVTHLLI   69 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC------------CTTCCEEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---CCCeEEEecccccc------------cCCCCEEEE
Confidence            78999998 999999999999999999999999887665544   46899999999833            357999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  183 (297)
                      +|+...  ..     ..  .          ...+++++...  ..+..++|++||......           ..+...|+
T Consensus        70 ~a~~~~--~~-----~~--~----------~~~l~~a~~~~--~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           70 STAPDS--GG-----DP--V----------LAALGDQIAAR--AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             CCCCBT--TB-----CH--H----------HHHHHHHHHHT--GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             CCCccc--cc-----cH--H----------HHHHHHHHHhh--cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            999652  11     10  0          12233333321  134468999998754321           12345799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|.+.|.+++.+      .+++++.++|+.++++..... .....+...    . .... .....+++++|+|+++..+
T Consensus       129 ~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~----~-~~~~-~~~~~~i~v~Dva~a~~~~  195 (286)
T 3ius_A          129 RWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPF-SKLGKGGIR----R-IIKP-GQVFSRIHVEDIAQVLAAS  195 (286)
T ss_dssp             HHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSS-TTSSSSCCC----E-EECT-TCCBCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh------cCCCEEEEeccceECCCchHH-HHHhcCCcc----c-cCCC-CcccceEEHHHHHHHHHHH
Confidence            9999999988876      589999999999998753321 111000000    0 0000 1225678999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccccC
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++...   .|+.+++.+|......
T Consensus       196 ~~~~~---~g~~~~i~~~~~~s~~  216 (286)
T 3ius_A          196 MARPD---PGAVYNVCDDEPVPPQ  216 (286)
T ss_dssp             HHSCC---TTCEEEECCSCCBCHH
T ss_pred             HhCCC---CCCEEEEeCCCCccHH
Confidence            98764   6899999988765433

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.74  E-value=4.2e-18  Score=152.99  Aligned_cols=214  Identities=13%  Similarity=0.038  Sum_probs=141.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH----QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~----~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++.|+++||||||+||++++++|++.|++|++++|+.    ++.+.........+.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            3467999999999999999999999999999999987    3333222222457899999999999999888753     


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc----cCCCCccch
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL----GGLAQHTYS  183 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~----~~~~~~~Y~  183 (297)
                      ++|+|||++|..                     |+.++..+++++...-   ...++|+ |+.....    +..+...|+
T Consensus        83 ~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~~g---~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           83 EIDIVVSTVGGE---------------------SILDQIALVKAMKAVG---TIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             TCCEEEECCCGG---------------------GGGGHHHHHHHHHHHC---CCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             CCCEEEECCchh---------------------hHHHHHHHHHHHHHcC---CceEEee-cccCCCCCccCcCCCcchHH
Confidence            789999999841                     7777888888876531   1345654 4333221    224456899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      .+|.+.+.+.+.       .|++++.++||.+.+..................  ....+.......+++++|+|+++..+
T Consensus       138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~--~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDF--FQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSC--EEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCce--EEEccCCCceEEecCHHHHHHHHHHH
Confidence            999998877654       589999999999988653322110000000000  00011111224578999999999999


Q ss_pred             hcCCCCcccccEEEecC-Cccccc
Q 022418          264 ASDDAKYVSGHNLVVDG-GFTSFK  286 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdg-G~~~~~  286 (297)
                      +....  ..|+.+.+.| |.....
T Consensus       209 l~~~~--~~~~~~~i~g~~~~~s~  230 (346)
T 3i6i_A          209 VDDVR--TLNKSVHFRPSCNCLNI  230 (346)
T ss_dssp             TTCGG--GTTEEEECCCGGGEECH
T ss_pred             HhCcc--ccCeEEEEeCCCCCCCH
Confidence            97652  3467777764 454443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.73  E-value=5.3e-18  Score=152.94  Aligned_cols=218  Identities=12%  Similarity=0.045  Sum_probs=145.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCC-----CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNG-----AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G-----~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+++||||+|+||++++++|+++|     ++|++++|+.+...    ....++.++.+|++|++++.++++..    ++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----HEDNPINYVQCDISDPDDSQAKLSPL----TD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----CCSSCCEEEECCTTSHHHHHHHHTTC----TT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----cccCceEEEEeecCCHHHHHHHHhcC----CC
Confidence            5789999999999999999999999     99999999876432    11346888999999999888777532    24


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEE-------EEecccccccC-----
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCIL-------CTASVTGLLGG-----  176 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv-------~vss~~~~~~~-----  176 (297)
                      +|++||+||...           +++.+.+++|+.++.++++++.+..  .+..++|       ++||.......     
T Consensus        73 ~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           73 VTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             CCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             CCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccCCC
Confidence            999999999651           1357789999999999999987642  1234666       67776432110     


Q ss_pred             ---------CCCccchhhHHHHHHHHHHHHHHHccCC-cEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHH---Hhc
Q 022418          177 ---------LAQHTYSVSKSAIIGLVKSMAAELCEYG-IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV---YST  243 (297)
Q Consensus       177 ---------~~~~~Y~~sK~a~~~~~~~la~el~~~~-i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~  243 (297)
                               +....|    .+.|.+++.++.+   .+ ++++.++|+.++++.........    ....+....   .+.
T Consensus       140 ~~~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~----~~~~~~~~~~~~~g~  208 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNIFGFSPYSMMNLV----GTLCVYAAICKHEGK  208 (364)
T ss_dssp             SBCTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSEECCCTTCSSCHH----HHHHHHHHHHHHHTC
T ss_pred             CCCccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCceeCCCCCcccchH----HHHHHHHHHHHhcCC
Confidence                     112345    2345555554432   55 99999999999997543210000    000001111   111


Q ss_pred             C-C-C--------CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          244 G-V-L--------EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       244 ~-~-~--------~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      . . .        .-...+++|+|++++.++...  ...|+++++.+|....
T Consensus       209 ~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s  258 (364)
T 2v6g_A          209 VLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFK  258 (364)
T ss_dssp             CBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBC
T ss_pred             ceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCC
Confidence            0 1 1        023455699999999998654  2368999998886544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.73  E-value=2.3e-17  Score=145.33  Aligned_cols=206  Identities=15%  Similarity=0.141  Sum_probs=133.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-------hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQH-------QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-------~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +|+++||||||+||++++++|+++|++|++++|+.       ++.+.........+.++.+|++|++++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh------
Confidence            57899999999999999999999999999999986       43333221112468889999999998887776      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccc------cCCCC
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLL------GGLAQ  179 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~------~~~~~  179 (297)
                       ++|+|||++|..  .                   +.++..+++++..    .+ ..++|.  |..+..      ..+..
T Consensus        76 -~~d~vi~~a~~~--~-------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~p~~  127 (307)
T 2gas_A           76 -QVDIVICAAGRL--L-------------------IEDQVKIIKAIKE----AGNVKKFFP--SEFGLDVDRHDAVEPVR  127 (307)
T ss_dssp             -TCSEEEECSSSS--C-------------------GGGHHHHHHHHHH----HCCCSEEEC--SCCSSCTTSCCCCTTHH
T ss_pred             -CCCEEEECCccc--c-------------------cccHHHHHHHHHh----cCCceEEee--cccccCcccccCCCcch
Confidence             589999999864  1                   2334455555543    23 456663  433321      12224


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA  259 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  259 (297)
                      ..| .+|.+++.+.+.       .|++++.++||++.+++................. . ..........+++++|+|++
T Consensus       128 ~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          128 QVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKV-V-ILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEE-E-EETTSCSEEEEECHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeE-E-EecCCCcceEEeeHHHHHHH
Confidence            578 999998887652       4799999999999987543321100000000000 0 00111112457899999999


Q ss_pred             HHHHhcCCCCcccccEEEecC-Ccccc
Q 022418          260 ALYLASDDAKYVSGHNLVVDG-GFTSF  285 (297)
Q Consensus       260 ~~~l~~~~~~~~tG~~i~vdg-G~~~~  285 (297)
                      +..++.++.  ..|+.+.+.| |....
T Consensus       198 ~~~~l~~~~--~~~~~~~~~~~~~~~s  222 (307)
T 2gas_A          198 TIRAANDPN--TLNKAVHIRLPKNYLT  222 (307)
T ss_dssp             HHHHHTCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHHHcCcc--ccCceEEEeCCCCcCC
Confidence            999997652  2477777765 44443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.73  E-value=1.4e-17  Score=157.61  Aligned_cols=219  Identities=10%  Similarity=-0.039  Sum_probs=145.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.           ..+.+|+.+..         .+.+.++|+||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------~~v~~d~~~~~---------~~~l~~~D~Vi  206 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------GKRFWDPLNPA---------SDLLDGADVLV  206 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------TCEECCTTSCC---------TTTTTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------cceeecccchh---------HHhcCCCCEEE
Confidence            68999999999999999999999999999999987642           12567876431         12234799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-c----------CCCCccc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-G----------GLAQHTY  182 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~----------~~~~~~Y  182 (297)
                      |+||...  .   ...+.+.....+++|+.++.++++++..   +.+..++|++||..... .          ..+...|
T Consensus       207 h~A~~~~--~---~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          207 HLAGEPI--F---GRFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             ECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             ECCCCcc--c---cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            9999752  1   1345566788999999999999998543   23456899999866432 0          1133467


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY  262 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~  262 (297)
                      +.+|...+.+.+.    ....|++++.++||.++++... ..............  ...+.......+++++|+|++++.
T Consensus       279 ~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~~~~~~~~~~g~~--~~~g~g~~~~~~i~v~Dva~ai~~  351 (516)
T 3oh8_A          279 AEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-MLPLLKTLFSTGLG--GKFGDGTSWFSWIAIDDLTDIYYR  351 (516)
T ss_dssp             HHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HHHHHHHTTC---C--CCCTTSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hHHHHHHHHHhCCC--cccCCCCceEceEeHHHHHHHHHH
Confidence            8788777765433    3346899999999999997531 11111111110000  001111112457899999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccccCCCC
Q 022418          263 LASDDAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       263 l~~~~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      ++....  .. ..+++.+|......+.+
T Consensus       352 ~l~~~~--~~-g~~ni~~~~~~s~~el~  376 (516)
T 3oh8_A          352 AIVDAQ--IS-GPINAVAPNPVSNADMT  376 (516)
T ss_dssp             HHHCTT--CC-EEEEESCSCCEEHHHHH
T ss_pred             HHhCcc--cC-CcEEEECCCCCCHHHHH
Confidence            997653  23 46788777665544433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.69  E-value=3.2e-18  Score=152.00  Aligned_cols=206  Identities=15%  Similarity=0.058  Sum_probs=132.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-h-----hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQH-Q-----LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~-----~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .|+++||||||+||++++++|+++|++|++++|+. +     +.+.........+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            46899999999999999999999999999999986 2     2222211113468899999999999888776       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccc------cCCCCc
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLL------GGLAQH  180 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~------~~~~~~  180 (297)
                      .+|+|||++|..  .                   +.++..+++++..    .+ ..++|  .|..+..      ..+...
T Consensus        77 ~~d~vi~~a~~~--~-------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~~~~~~~p~~~  129 (321)
T 3c1o_A           77 QVDIVISALPFP--M-------------------ISSQIHIINAIKA----AGNIKRFL--PSDFGCEEDRIKPLPPFES  129 (321)
T ss_dssp             TCSEEEECCCGG--G-------------------SGGGHHHHHHHHH----HCCCCEEE--CSCCSSCGGGCCCCHHHHH
T ss_pred             CCCEEEECCCcc--c-------------------hhhHHHHHHHHHH----hCCccEEe--ccccccCccccccCCCcch
Confidence            589999999854  1                   3334445555543    23 45676  3433321      111134


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      .| .+|.+++.+++.       .+++++.++||.+.++.................. . ..........+++++|+|+++
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~Dva~~~  199 (321)
T 3c1o_A          130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDI-V-IYGTGETKFVLNYEEDIAKYT  199 (321)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCE-E-EETTSCCEEEEECHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCce-E-EecCCCcceeEeeHHHHHHHH
Confidence            78 999999887752       4788999999998775433221100000000000 0 001111224578999999999


Q ss_pred             HHHhcCCCCcccccEEEecC-Ccccc
Q 022418          261 LYLASDDAKYVSGHNLVVDG-GFTSF  285 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdg-G~~~~  285 (297)
                      ..++..+.  ..|+.+.+.| |..+.
T Consensus       200 ~~~l~~~~--~~g~~~~~~g~~~~~t  223 (321)
T 3c1o_A          200 IKVACDPR--CCNRIVIYRPPKNIIS  223 (321)
T ss_dssp             HHHHHCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHHhCcc--ccCeEEEEeCCCCccc
Confidence            99997653  2478888876 45544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.69  E-value=1.1e-16  Score=141.31  Aligned_cols=211  Identities=13%  Similarity=0.083  Sum_probs=135.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-----hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-----LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .|+++||||||+||++++++|+++|++|++++|+..     +.+.........+.++.+|++|++++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            478999999999999999999999999999999853     2222221124568899999999999887775       5


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccccccc------CCCCcc
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLG------GLAQHT  181 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~------~~~~~~  181 (297)
                      +|+|||++|...  ..               .|+.++..+++++..    .+ ..++|+ |+......      .+....
T Consensus        77 ~d~vi~~a~~~~--~~---------------~~~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~  134 (313)
T 1qyd_A           77 VDVVISALAGGV--LS---------------HHILEQLKLVEAIKE----AGNIKRFLP-SEFGMDPDIMEHALQPGSIT  134 (313)
T ss_dssp             CSEEEECCCCSS--SS---------------TTTTTHHHHHHHHHH----SCCCSEEEC-SCCSSCTTSCCCCCSSTTHH
T ss_pred             CCEEEECCcccc--ch---------------hhHHHHHHHHHHHHh----cCCCceEEe-cCCcCCccccccCCCCCcch
Confidence            899999999652  11               156666667776654    33 457764 43321111      122456


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-YAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      | .+|.+++.+.+       ..|++++.++||++.+++........ .........  ...........+++++|+|+++
T Consensus       135 y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~  204 (313)
T 1qyd_A          135 F-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV--LIYGDGNVKGIWVDEDDVGTYT  204 (313)
T ss_dssp             H-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEE--CCBTTSCSEEEEECHHHHHHHH
T ss_pred             H-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeE--EEeCCCCceEEEEEHHHHHHHH
Confidence            8 99999888764       25799999999998765332111100 000000000  0001111124568999999999


Q ss_pred             HHHhcCCCCcccccEEEecC-Ccccc
Q 022418          261 LYLASDDAKYVSGHNLVVDG-GFTSF  285 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdg-G~~~~  285 (297)
                      ..++..+.  ..|+.+.+.| |..+.
T Consensus       205 ~~~l~~~~--~~~~~~~~~g~~~~~s  228 (313)
T 1qyd_A          205 IKSIDDPQ--TLNKTMYIRPPMNILS  228 (313)
T ss_dssp             HHHTTCGG--GSSSEEECCCGGGEEE
T ss_pred             HHHHhCcc--cCCceEEEeCCCCccC
Confidence            99997652  2467777765 44443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.64  E-value=3.3e-17  Score=144.42  Aligned_cols=207  Identities=14%  Similarity=0.141  Sum_probs=130.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh------HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL------GQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~------~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .|+++||||||+||++++++|+++|++|++++|+...      .+.........+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            4789999999999999999999999999999998532      211111114568899999999999888876       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccc----c-CCCCcc
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLL----G-GLAQHT  181 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~----~-~~~~~~  181 (297)
                      ++|++||++|..  .                   +.++..+++++..    .+ ..++|+ |+.....    + .+....
T Consensus        77 ~~d~vi~~a~~~--~-------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  130 (308)
T 1qyc_A           77 NVDVVISTVGSL--Q-------------------IESQVNIIKAIKE----VGTVKRFFP-SEFGNDVDNVHAVEPAKSV  130 (308)
T ss_dssp             TCSEEEECCCGG--G-------------------SGGGHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCCTTHHHH
T ss_pred             CCCEEEECCcch--h-------------------hhhHHHHHHHHHh----cCCCceEee-cccccCccccccCCcchhH
Confidence            589999999854  1                   2233445555543    23 456763 4332221    1 122346


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      | .+|.+++.+.+.       .+++++.++||++.+.+.................  ...........+++++|+|+++.
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~Dva~~~~  200 (308)
T 1qyc_A          131 F-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKV--VILGDGNARVVFVKEEDIGTFTI  200 (308)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEE--EEETTSCCEEEEECHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCce--EEecCCCceEEEecHHHHHHHHH
Confidence            8 999998887653       4788999999998765332111000000000000  00011111245688999999999


Q ss_pred             HHhcCCCCcccccEEEecC-Ccccc
Q 022418          262 YLASDDAKYVSGHNLVVDG-GFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdg-G~~~~  285 (297)
                      .++..+.  ..|+.+.+.| |....
T Consensus       201 ~~l~~~~--~~~~~~~~~g~~~~~s  223 (308)
T 1qyc_A          201 KAVDDPR--TLNKTLYLRLPANTLS  223 (308)
T ss_dssp             TTSSCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHhCcc--ccCeEEEEeCCCCccC
Confidence            9997642  2467777765 44444

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.64  E-value=3e-16  Score=139.11  Aligned_cols=203  Identities=11%  Similarity=0.049  Sum_probs=129.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+++||||||+||++++++|+++|++|++++|+.+ ..+...+.....+.++.+|++|++++.++++       ++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            58999999999999999999999999999999875 3222211112458889999999999888776       589999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEeccccccc-----CCCCccchhhHH
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLLG-----GLAQHTYSVSKS  187 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~~-----~~~~~~Y~~sK~  187 (297)
                      |+++..  .                   +.++..+++++..    .+ ..++|+ |+......     .+....| .+|.
T Consensus        85 ~~a~~~--~-------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           85 SALAFP--Q-------------------ILDQFKILEAIKV----AGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             ECCCGG--G-------------------STTHHHHHHHHHH----HCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             ECCchh--h-------------------hHHHHHHHHHHHh----cCCCCEEEe-eccccCcccccCCCCcchhH-HHHH
Confidence            999854  1                   2233445555433    23 456763 43221111     1113468 8999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      +++.+.+.       .+++++.++||.+.+.+.........   .....  ...........+++++|+|+++..++..+
T Consensus       138 ~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          138 MIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYD---PKDEI--TVYGTGEAKFAMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             HHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTC---CCSEE--EEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccC---CCCce--EEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence            98877653       57899999999887653322211100   00000  00011111245789999999999999764


Q ss_pred             CCcccccEEEecC-Ccccc
Q 022418          268 AKYVSGHNLVVDG-GFTSF  285 (297)
Q Consensus       268 ~~~~tG~~i~vdg-G~~~~  285 (297)
                      .  ..|+.+.+.| |....
T Consensus       206 ~--~~~~~~~~~g~~~~~s  222 (318)
T 2r6j_A          206 R--ALNRVVIYRPSTNIIT  222 (318)
T ss_dssp             G--GTTEEEECCCGGGEEE
T ss_pred             c--ccCeEEEecCCCCccC
Confidence            2  2367777764 44443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.59  E-value=1.6e-14  Score=126.76  Aligned_cols=209  Identities=16%  Similarity=0.050  Sum_probs=133.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+||||||||.||++++++|.++|++|+++.|++...         .   +..|     .+      ..+....+|.+||
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~---~~~~-----~~------~~~~l~~~d~vih   57 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------R---ITWD-----EL------AASGLPSCDAAVN   57 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------E---EEHH-----HH------HHHCCCSCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------e---eecc-----hh------hHhhccCCCEEEE
Confidence            5799999999999999999999999999999976421         1   1111     11      1123457999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------CCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------LAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~  183 (297)
                      .||..  ........+.+.....++.|+.++..+.+++...-  .+..++|+.||.......           .+...|+
T Consensus        58 la~~~--i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~  133 (298)
T 4b4o_A           58 LAGEN--ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFS  133 (298)
T ss_dssp             CCCCC--SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHH
T ss_pred             eccCc--ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CCceEEEEEeeeeeecCCCCCcccccCCccccchhH
Confidence            99854  22223446777788899999999998888765522  233456666665443211           1222344


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH------hcCCCCCCCCCHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY------STGVLEGTHCEPNDIA  257 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~dia  257 (297)
                      ..|...+.     .......++++..++||.|.++..... ...        ......      +.......+++++|+|
T Consensus       134 ~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-~~~--------~~~~~~~~~~~~g~g~~~~~~ihv~Dva  199 (298)
T 4b4o_A          134 NLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-GHM--------LLPFRLGLGGPIGSGHQFFPWIHIGDLA  199 (298)
T ss_dssp             HHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-HHH--------HHHHHTTCCCCBTTSCSBCCEEEHHHHH
T ss_pred             HHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-hHH--------HHHHhcCCcceecccCceeecCcHHHHH
Confidence            44443332     223445689999999999999753211 110        001111      1122235578999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccccC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +++.++++.+.  ..| .+++.++......
T Consensus       200 ~a~~~~~~~~~--~~g-~yn~~~~~~~t~~  226 (298)
T 4b4o_A          200 GILTHALEANH--VHG-VLNGVAPSSATNA  226 (298)
T ss_dssp             HHHHHHHHCTT--CCE-EEEESCSCCCBHH
T ss_pred             HHHHHHHhCCC--CCC-eEEEECCCccCHH
Confidence            99999987652  244 8888887765433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.31  E-value=2.2e-13  Score=119.26  Aligned_cols=109  Identities=15%  Similarity=0.221  Sum_probs=80.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++||+++||||+||+|++++..|+++|++|++++|+.++.++..+++.  ..+.++.+|+++++++.++++       
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------
Confidence            45789999999999999999999999999999999999888777765542  245678899999988877665       


Q ss_pred             CccEEEECccCCCCCCCccCCCCH-HHHHHHHHHhhhHHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNL-EVFDQVMRINVRGVV  146 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  146 (297)
                      .+|++|||+|... ...+..+.+. +++...+++|+.+++
T Consensus       188 ~~DvlVn~ag~g~-~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGL-ELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTC-CSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccc-cCCChhHcCchHHHHHHHHhhhhhhH
Confidence            4799999998642 1111111221 333445666666554

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.27  E-value=8e-12  Score=111.29  Aligned_cols=163  Identities=12%  Similarity=0.114  Sum_probs=109.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCc--hhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-------KVVIADIQH--QLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ++++||||+|+||.+++..|+++|.       .|+++++..  +..+....++ +..+.++ .|+.+.++..+.++    
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~----   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK----   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC----
Confidence            5799999999999999999999996       799999875  2222222222 1112222 56665544444443    


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc--------c-c
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL--------L-G  175 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~--------~-~  175 (297)
                         ..|++||.||....+     ..+   ..+.+++|+.++..+++++...-  ....+++++|+....        . +
T Consensus        80 ---~~D~Vih~Ag~~~~~-----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           80 ---DADYALLVGAAPRKA-----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             ---TCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             ---CCCEEEECCCcCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCC
Confidence               689999999976311     122   35689999999999999987642  123578887775421        1 2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCc
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP  218 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~  218 (297)
                      .++...|+.+|...+.+.+.+++.+   |+.+..++|..|.++
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             CChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence            4455679999999999998888763   555555555554443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.09  E-value=4.1e-10  Score=94.20  Aligned_cols=78  Identities=23%  Similarity=0.176  Sum_probs=61.7

Q ss_pred             CCCCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH
Q 022418           31 KLEEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD   94 (297)
Q Consensus        31 ~~~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~   94 (297)
                      +++||++|||||                ||+||.++|++|+++|++|++++++.. ++     ....  .-.+|+++.+ 
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~~g--~~~~dv~~~~-   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TPPF--VKRVDVMTAL-   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CCTT--EEEEECCSHH-
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cCCC--CeEEccCcHH-
Confidence            589999999999                699999999999999999999988653 11     1111  2356887754 


Q ss_pred             HHHHHHHHHHHcCCccEEEECccCC
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                        ++++.+.+.++++|++|||||+.
T Consensus        76 --~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           76 --EMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             --HHHHHHHHHGGGCSEEEECCBCC
T ss_pred             --HHHHHHHHhcCCCCEEEECCccc
Confidence              45666677788999999999986

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.92  E-value=5.6e-09  Score=78.00  Aligned_cols=74  Identities=19%  Similarity=0.162  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|+.++.+...   ...+..+.+|+++.+++.++++       ++|+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~   72 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKALG-------GFDA   72 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHHc-------CCCE
Confidence            4578999999 999999999999999 89999999988777654   2457788999999988777664       6899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|++++
T Consensus        73 vi~~~~   78 (118)
T 3ic5_A           73 VISAAP   78 (118)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=8.1e-10  Score=92.60  Aligned_cols=92  Identities=17%  Similarity=0.250  Sum_probs=64.4

Q ss_pred             CCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHH
Q 022418           33 EEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS   96 (297)
Q Consensus        33 ~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~   96 (297)
                      +||++|||||                ||++|.++|++|+++|++|++++|+.+...    .....+  -..|+.   +..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~--~~~~v~---s~~   72 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNL--SIREIT---NTK   72 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTE--EEEECC---SHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCe--EEEEHh---HHH
Confidence            5899999999                888999999999999999999999764210    001122  233444   566


Q ss_pred             HHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHH
Q 022418           97 DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFD  135 (297)
Q Consensus        97 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~  135 (297)
                      ++++.+.+.++++|++|+||++.  ...+....+.+.+.
T Consensus        73 em~~~v~~~~~~~Dili~aAAvs--D~~p~~~~~~e~~~  109 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVS--DYTPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCC--SEEEEEEEEHHHHH
T ss_pred             HHHHHHHHhcCCCCEEEEcCccc--cccchhhcchhhhh
Confidence            67777777788999999999986  33333333444443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.73  E-value=1.6e-08  Score=80.14  Aligned_cols=74  Identities=14%  Similarity=0.121  Sum_probs=62.5

Q ss_pred             cHHHHHHHHHHHCCCeEEEEeCCchhH------HHHHHHhCCCeeEEEecCCCH--HHHHHHHHHHHHHcCCccEEEECc
Q 022418           45 GIGKATAAKFISNGAKVVIADIQHQLG------QQTAKELGPNATFIACDVTKE--SDVSDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        45 giG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~~~v~~~~~D~s~~--~~i~~~~~~~~~~~g~id~li~~a  116 (297)
                      -++.++++.|+++|++|++..|+.+..      .+..++.+.++..+.+|++++  ++++++++.+.+.+|+ |+|||||
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnA  105 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCL  105 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECS
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECC
Confidence            477899999999999999998875432      334455577788889999999  9999999999988899 9999999


Q ss_pred             cCC
Q 022418          117 GVA  119 (297)
Q Consensus       117 g~~  119 (297)
                      |..
T Consensus       106 gg~  108 (157)
T 3gxh_A          106 ANY  108 (157)
T ss_dssp             BSH
T ss_pred             CCC
Confidence            964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.70  E-value=5.2e-08  Score=89.07  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHhC----CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFISNG---AKVVIADIQHQLGQQTAKELG----PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G---~~Vi~~~r~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++++|+|| |++|+++++.|++.|   ..|++++|+.+++++..+++.    .++..+.+|++|.+++.++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57999999 899999999999998   389999999999888877763    36888999999999999999876     


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ++|+|||++|..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            689999999853

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.63  E-value=7.4e-08  Score=85.61  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++||||+||||.++++.+.+.|++|++++++.++++.. ++++..   ..+|.++.+++.+.+.+...  +++|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~  217 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD---AAFNYKTVNSLEEALKKASP--DGYDC  217 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS---EEEETTSCSCHHHHHHHHCT--TCEEE
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc---EEEecCCHHHHHHHHHHHhC--CCCeE
Confidence            3689999999999999999999999999999999998877766 555543   23588774555555555432  57999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1v3u_A          218 YFDNVG  223 (333)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.61  E-value=8.5e-08  Score=78.64  Aligned_cols=103  Identities=16%  Similarity=0.198  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.. ++++..   ..+|.++.+..+.+.+...  .+++|++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVE---YVGDSRSVDFADEILELTD--GYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCS---EEEETTCSTHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEeeCCcHHHHHHHHHHhC--CCCCeEE
Confidence            579999999999999999999999999999999998766554 334432   2358877654444443321  1369999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      |+|+|..                            .++.+++.++  +.|++|.+++..
T Consensus       112 i~~~g~~----------------------------~~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          112 LNSLAGE----------------------------AIQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             EECCCTH----------------------------HHHHHHHTEE--EEEEEEECSCGG
T ss_pred             EECCchH----------------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            9999721                            1345556664  358999887644

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.61  E-value=2.8e-10  Score=105.10  Aligned_cols=46  Identities=28%  Similarity=0.447  Sum_probs=40.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      +++.||+++|||++ +||+++++.|+..|++|++++++.....+...
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46899999999987 99999999999999999999999876655443

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.57  E-value=1.9e-07  Score=84.22  Aligned_cols=108  Identities=18%  Similarity=0.224  Sum_probs=77.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++++++|+|+ |++|+++++.+...|++|++++|+.++++...+..+..   +.+|.++.+++.+.++       ..
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHh-------CC
Confidence            3588999999999 99999999999999999999999998877766655544   4567788877776664       57


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      |++|+++|...  ..                   ++..+.+..++.|+  +.+.+|++++..
T Consensus       231 DvVi~~~g~~~--~~-------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          231 DLLIGAVLVPG--AK-------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             SEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CEEEECCCCCc--cc-------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            99999998641  00                   01223456667774  457888888653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.57  E-value=1.4e-07  Score=87.33  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++.++..+.++ .+..+.+|+++.+++.++++       ++|+|
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~-------~~DvV   72 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA-------KHDLV   72 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHc-------CCcEE
Confidence            468999998 7999999999999999999999999877666554332 36778899999988877664       68999


Q ss_pred             EECccCC
Q 022418          113 YNNAGVA  119 (297)
Q Consensus       113 i~~ag~~  119 (297)
                      ||+++..
T Consensus        73 In~a~~~   79 (450)
T 1ff9_A           73 ISLIPYT   79 (450)
T ss_dssp             EECCC--
T ss_pred             EECCccc
Confidence            9999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.49  E-value=1.7e-08  Score=95.33  Aligned_cols=101  Identities=25%  Similarity=0.275  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++|||| ||+|++++.+|+++|++|++++|+.+++++..++++..+.    ++.+   +    +..  ..+.+|
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~----~~~d---l----~~~--~~~~~D  426 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL----SLTD---L----DNY--HPEDGM  426 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE----ETTT---T----TTC----CCSE
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee----eHHH---h----hhc--cccCce
Confidence            578999999999 5999999999999999999999999988888877754332    2222   1    100  113589


Q ss_pred             EEEECccCCCCC---CCccCCCCHHHHHHHHHHhhhHH
Q 022418          111 IMYNNAGVACKT---PRSIVDLNLEVFDQVMRINVRGV  145 (297)
Q Consensus       111 ~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  145 (297)
                      ++|||+|....+   ..++.+.+.+.+...+++|+.+.
T Consensus       427 ilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          427 VLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             EEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            999999975211   12344444555555666666543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.47  E-value=4.3e-07  Score=84.34  Aligned_cols=80  Identities=19%  Similarity=0.198  Sum_probs=64.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++|+|+ |++|++++..|++. |++|++++|+.++++++.+.  ..+..+.+|+++.+++.++++       +
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~-------~   88 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLA-------D   88 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHH-------T
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHc-------C
Confidence            4678899999997 99999999999998 78999999999888777654  245677899999988877665       6


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      +|+|||+++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            89999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=5.6e-07  Score=80.42  Aligned_cols=105  Identities=22%  Similarity=0.206  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+|++|++|.++++.+...|++|++++|+.++.+.. ++++..   ...|+++.+++.+.+.++...  ++|+
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~~--~~D~  241 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGE---VFIDFTKEKDIVGAVLKATDG--GAHG  241 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCC---EEEETTTCSCHHHHHHHHHTS--CEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCc---eEEecCccHhHHHHHHHHhCC--CCCE
Confidence            3579999999999999999999999999999999998877544 445543   234887666666666665433  7999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      +|+++|..            +               .++.+++.++  ..|+++.+++..
T Consensus       242 vi~~~g~~------------~---------------~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          242 VINVSVSE------------A---------------AIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EEECSSCH------------H---------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred             EEECCCcH------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            99999832            0               3455556663  358999887643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.42  E-value=3.9e-07  Score=81.25  Aligned_cols=80  Identities=21%  Similarity=0.296  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|++|..+++.+...|++|+++++++++++...++++...   .+|.++.+++.+.++++..  +++|++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP--NGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC--CCCcEE
Confidence            68999999999999999999999999999999999888777665565432   2477665455555554432  479999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |+|+|
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99997

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.39  E-value=9.2e-08  Score=83.37  Aligned_cols=78  Identities=19%  Similarity=0.271  Sum_probs=58.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCC---eeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPN---ATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++|||++ |+|++++..|+++| +|++++|+.+++++..+++...   ...+.+|+++.          .+.+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence            36789999999997 99999999999999 9999999988887776654210   00123344441          2345


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                      +++|++|||+|..
T Consensus       192 ~~~DilVn~ag~~  204 (287)
T 1nvt_A          192 DGVDIIINATPIG  204 (287)
T ss_dssp             TTCCEEEECSCTT
T ss_pred             CCCCEEEECCCCC
Confidence            6899999999976

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.39  E-value=1.6e-06  Score=66.97  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .++++++|+|+ |.+|.++++.|.++|++|++++++++..+...+.   .+.++.+|.++++.++++      ...+.|+
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~---~~~~~~gd~~~~~~l~~~------~~~~~d~   73 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE---GFDAVIADPTDESFYRSL------DLEGVSA   73 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---TCEEEECCTTCHHHHHHS------CCTTCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC---CCcEEECCCCCHHHHHhC------CcccCCE
Confidence            34578999998 7899999999999999999999999887776553   467788999998876543      1246899


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|.+.+
T Consensus        74 vi~~~~   79 (141)
T 3llv_A           74 VLITGS   79 (141)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            997765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.37  E-value=9.9e-07  Score=78.30  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|+||.++++.+...|++|++++|++++++...+ ++...   .+|.++.+..+++.+...  ..++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~---~~d~~~~~~~~~i~~~~~--~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHH---TINYSTQDFAEVVREITG--GKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHHT--TCCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCHHHHHHHHHHhC--CCCCeEE
Confidence            57899999999999999999999999999999999877766543 55432   347776554444443321  1369999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |+|+|.
T Consensus       219 i~~~g~  224 (333)
T 1wly_A          219 YDSIGK  224 (333)
T ss_dssp             EECSCT
T ss_pred             EECCcH
Confidence            999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.36  E-value=7.5e-07  Score=78.85  Aligned_cols=104  Identities=20%  Similarity=0.246  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++||||+|+||.++++.+...|++|++++|++++++...+ ++...   .+|.++.+..+++.+...  ..++|++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~~~~~--~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQ---VINYREEDLVERLKEITG--GKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCccHHHHHHHHhC--CCCceEE
Confidence            58999999999999999999999999999999999887766544 54432   347776655554444321  1369999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      |+|+| .  .                         .++.+++.++  ..|+++.+++..+
T Consensus       214 i~~~g-~--~-------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          214 YDSVG-R--D-------------------------TWERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             EECSC-G--G-------------------------GHHHHHHTEE--EEEEEEECCCTTC
T ss_pred             EECCc-h--H-------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            99998 2  1                         1344555563  3589998876543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.34  E-value=1.7e-06  Score=76.83  Aligned_cols=151  Identities=13%  Similarity=0.065  Sum_probs=97.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCC----chhHHHHHHHhCCC-eeEEEecCCCHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-------KVVIADIQ----HQLGQQTAKELGPN-ATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~~~~~-v~~~~~D~s~~~~i~~~~~  100 (297)
                      +.++++||||+|++|.+++..|+..|.       .|.+++++    .++++....++... ..+ ..|+....+..+.++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence            346899999999999999999999885       79999998    55454433333211 111 134443333333333


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc--------
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG--------  172 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~--------  172 (297)
                             ..|++||.||....+     ..+.   .+.+..|+..+..+.+.+..+-  ...+++|++|.-..        
T Consensus        83 -------~aD~Vi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~  145 (329)
T 1b8p_A           83 -------DADVALLVGARPRGP-----GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK  145 (329)
T ss_dssp             -------TCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             -------CCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence                   689999999965311     1232   4568899998888888887642  13468888887332        


Q ss_pred             cc-cCCCCccchhhHHHHHHHHHHHHHHHc
Q 022418          173 LL-GGLAQHTYSVSKSAIIGLVKSMAAELC  201 (297)
Q Consensus       173 ~~-~~~~~~~Y~~sK~a~~~~~~~la~el~  201 (297)
                      .. +.+....|+.++.--..+...+++.+.
T Consensus       146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            11 334445688887655666777777654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.33  E-value=1.7e-06  Score=77.53  Aligned_cols=79  Identities=14%  Similarity=0.176  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|++|.++++.+...|++|+++++++++.+. .++++..   ..+|.++.+..+++.+...  ..++|++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  243 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAH---EVFNHREVNYIDKIKKYVG--EKGIDII  243 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCS---EEEETTSTTHHHHHHHHHC--TTCEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHcCCC---EEEeCCCchHHHHHHHHcC--CCCcEEE
Confidence            57899999999999999999999999999999999887764 4455543   2357776544444433221  1379999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |+|+|
T Consensus       244 i~~~G  248 (351)
T 1yb5_A          244 IEMLA  248 (351)
T ss_dssp             EESCH
T ss_pred             EECCC
Confidence            99998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.33  E-value=6.7e-07  Score=68.84  Aligned_cols=77  Identities=14%  Similarity=0.230  Sum_probs=57.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++++++|+|+ |++|..+++.|.+.|++|++++++.+..+...+   .....+..|.++.+.+.++      ..++.|
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~------~~~~~d   72 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL------GIRNFE   72 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTT------TGGGCS
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhc------CCCCCC
Confidence            356788999998 999999999999999999999998766544322   1245677899987655433      123689


Q ss_pred             EEEECcc
Q 022418          111 IMYNNAG  117 (297)
Q Consensus       111 ~li~~ag  117 (297)
                      ++|++++
T Consensus        73 ~vi~~~~   79 (144)
T 2hmt_A           73 YVIVAIG   79 (144)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999886

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.33  E-value=1.6e-06  Score=76.99  Aligned_cols=80  Identities=21%  Similarity=0.283  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+|++|+||..+++.+...|++|+++++++++.+...++++...   ..|.++.+-.+.+.+ ..  .+++|+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~-~~--~~~~d~  221 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG---AIDYKNEDLAAGLKR-EC--PKGIDV  221 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE---EEETTTSCHHHHHHH-HC--TTCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE---EEECCCHHHHHHHHH-hc--CCCceE
Confidence            368899999999999999999999999999999999988877756665432   246666443333333 22  247999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|+|+|
T Consensus       222 vi~~~g  227 (336)
T 4b7c_A          222 FFDNVG  227 (336)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.33  E-value=1.1e-06  Score=78.70  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ++++|+||+|+||..+++.+...|+ +|+++++++++.+...++++..   ..+|.++.+..+. +.+...  +++|++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~-~~~~~~--~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD---AAINYKKDNVAEQ-LRESCP--AGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS---EEEETTTSCHHHH-HHHHCT--TCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc---eEEecCchHHHHH-HHHhcC--CCCCEEE
Confidence            8999999999999999999999999 9999999988877766556543   2357766433333 333221  2799999


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      +|+|
T Consensus       236 ~~~G  239 (357)
T 2zb4_A          236 DNVG  239 (357)
T ss_dssp             ESCC
T ss_pred             ECCC
Confidence            9998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.32  E-value=1.3e-06  Score=78.26  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|+||.++++.+...|++|+++++++++++.. ++++..   ..+|.++.+..+++.+...  .+++|++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA---AGFNYKKEDFSEATLKFTK--GAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS---EEEETTTSCHHHHHHHHTT--TSCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc---EEEecCChHHHHHHHHHhc--CCCceEE
Confidence            578999999999999999999999999999999998877765 455543   2357766544444433221  1369999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |+|+|.
T Consensus       236 i~~~G~  241 (354)
T 2j8z_A          236 LDCIGG  241 (354)
T ss_dssp             EESSCG
T ss_pred             EECCCc
Confidence            999983

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.30  E-value=1.3e-06  Score=75.37  Aligned_cols=76  Identities=16%  Similarity=0.235  Sum_probs=58.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++........|+   +++.        + ++.|
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~--------~-~~~D  182 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELE--------G-HEFD  182 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGT--------T-CCCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhc--------c-CCCC
Confidence            578999999998 7999999999999999999999999988888776632111112333   2221        1 5899


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++||++|..
T Consensus       183 ivVn~t~~~  191 (271)
T 1nyt_A          183 LIINATSSG  191 (271)
T ss_dssp             EEEECCSCG
T ss_pred             EEEECCCCC
Confidence            999999975

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.30  E-value=4.7e-06  Score=73.28  Aligned_cols=82  Identities=17%  Similarity=0.267  Sum_probs=63.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ---HQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~---~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++..  .......++.+.+++.+.++   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            4689999999998 7999999999999999 89999999   7777777666521  13344557777666655444   


Q ss_pred             HHcCCccEEEECccCC
Q 022418          104 SKHNQLDIMYNNAGVA  119 (297)
Q Consensus       104 ~~~g~id~li~~ag~~  119 (297)
                          ..|+|||.....
T Consensus       226 ----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ----ESVIFTNATGVG  237 (315)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----CCCEEEECccCC
Confidence                579999988654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.22  E-value=5.9e-06  Score=76.31  Aligned_cols=85  Identities=19%  Similarity=0.257  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEE--ecCC---------CHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--CDVT---------KESDVSDAVD  100 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~--~D~s---------~~~~i~~~~~  100 (297)
                      -.|++|+|+|++|+||...+..+...|++|+++++++++++.. ++++....+-.  .|+.         +.++..++.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            4689999999999999999999999999999999988877665 45654432221  1221         1234444555


Q ss_pred             HHHHHcC-CccEEEECcc
Q 022418          101 FTISKHN-QLDIMYNNAG  117 (297)
Q Consensus       101 ~~~~~~g-~id~li~~ag  117 (297)
                      .+.+..+ ++|++|+++|
T Consensus       298 ~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHSSCCSEEEECSC
T ss_pred             HHHHHhCCCceEEEECCC
Confidence            5555434 6999999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.15  E-value=1.5e-05  Score=62.40  Aligned_cols=78  Identities=18%  Similarity=0.173  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .++.++|.|+ |.+|+.+++.|.+.|++|++++++. +..+...+.....+.++..|.++++.+.++      ...+.|.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            3567888886 9999999999999999999999984 555555554445578899999998776543      1236799


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|...+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            987664

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.14  E-value=6.4e-06  Score=73.48  Aligned_cols=80  Identities=15%  Similarity=0.261  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++++|+|+++++|..+++.+... |++|+++++++++++.. ++++...   ..|.++.+..+++. ++... +++|+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~-~~~~~-~~~d~  243 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADY---VINASMQDPLAEIR-RITES-KGVDA  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHHHHHH-HHTTT-SCEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCE---EecCCCccHHHHHH-HHhcC-CCceE
Confidence            6789999999999999999999999 99999999998877655 4455432   24666644333322 22211 47999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999983

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.08  E-value=2e-05  Score=60.10  Aligned_cols=75  Identities=24%  Similarity=0.385  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+.+..+...+..  .+..+..|.++++.+.+.      ...+.|++|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~------~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMYI   74 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHc------CcccCCEEE
Confidence            468999987 99999999999999999999999988777665543  355677899887654321      124689999


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      .+.+
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            8864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.07  E-value=4.2e-05  Score=68.20  Aligned_cols=78  Identities=13%  Similarity=0.102  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++++|+||+|++|...+..+...|++|+++++++++.+... +++...   ..|..+.+-.+.+.+....  .++|++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~~~~~v~~~~~~--~g~D~vi  238 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAH---VLNEKAPDFEATLREVMKA--EQPRIFL  238 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSE---EEETTSTTHHHHHHHHHHH--HCCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEECCcHHHHHHHHHHhcC--CCCcEEE
Confidence            489999999999999999999999999999999988876654 455432   2355554333333332222  2799999


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      +++|
T Consensus       239 d~~g  242 (349)
T 3pi7_A          239 DAVT  242 (349)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.06  E-value=9.5e-06  Score=71.94  Aligned_cols=81  Identities=21%  Similarity=0.302  Sum_probs=59.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+||+|++|..++..+...|++|+++++++++++. .++++...   ..|.++.+..+++.+.. . ..++|+
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~---~~~~~~~~~~~~~~~~~-~-~~g~D~  220 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI-AKEYGAEY---LINASKEDILRQVLKFT-N-GKGVDA  220 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE---EEETTTSCHHHHHHHHT-T-TSCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcE---EEeCCCchHHHHHHHHh-C-CCCceE
Confidence            468899999999999999999999999999999999887774 45565432   23555544333333322 1 136999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       221 vid~~g~  227 (334)
T 3qwb_A          221 SFDSVGK  227 (334)
T ss_dssp             EEECCGG
T ss_pred             EEECCCh
Confidence            9999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.06  E-value=1.4e-05  Score=71.44  Aligned_cols=80  Identities=21%  Similarity=0.231  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+||+|++|..++..+...|++|+++++++++++... +++...   ..|.++.+..+.+.+ ..  .+++|+
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~---~~~~~~~~~~~~~~~-~~--~~g~Dv  238 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKR---GINYRSEDFAAVIKA-ET--GQGVDI  238 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHH-HH--SSCEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCE---EEeCCchHHHHHHHH-Hh--CCCceE
Confidence            36789999999999999999999999999999999998876554 455432   246655444433333 32  457999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.06  E-value=1.2e-05  Score=71.52  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+... +++...   .+|.++.+ +.+.+.+... ..++|++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~---~~d~~~~~-~~~~~~~~~~-~~~~d~v  239 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADE---TVNYTHPD-WPKEVRRLTG-GKGADKV  239 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTSTT-HHHHHHHHTT-TTCEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE---EEcCCccc-HHHHHHHHhC-CCCceEE
Confidence            5789999999999999999999999999999999988776654 455432   25777653 2222322211 1379999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |+++|
T Consensus       240 i~~~g  244 (343)
T 2eih_A          240 VDHTG  244 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.00  E-value=3.7e-06  Score=72.88  Aligned_cols=78  Identities=21%  Similarity=0.356  Sum_probs=58.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhC---CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELG---PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.   ..+.....+..+   +.+.++      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            688999999998 8999999999999999 69999999998888776652   123333444433   333333      


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                       ..|++||.....
T Consensus       194 -~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -AADGVVNATPMG  205 (283)
T ss_dssp             -HSSEEEECSSTT
T ss_pred             -cCCEEEECCCCC
Confidence             369999988654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.98  E-value=1.6e-05  Score=70.24  Aligned_cols=81  Identities=19%  Similarity=0.281  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+||+|++|..++..+...|++|+++++++++++... +++...   ..|.++.+-.+++.+..  ...++|+
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~~~~~~~~~~--~~~g~Dv  212 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWE---TIDYSHEDVAKRVLELT--DGKKCPV  212 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHHHT--TTCCEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEeCCCccHHHHHHHHh--CCCCceE
Confidence            36889999999999999999999999999999999988777554 455432   23665544343333322  1137999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       213 vid~~g~  219 (325)
T 3jyn_A          213 VYDGVGQ  219 (325)
T ss_dssp             EEESSCG
T ss_pred             EEECCCh
Confidence            9999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.96  E-value=1.8e-05  Score=70.28  Aligned_cols=81  Identities=15%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+|+++++|..++..+...|++|+++++++++.+...+ ++....   .|.++.+-.+++.+..  ...++|+
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~~---~~~~~~~~~~~~~~~~--~~~g~Dv  216 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAYV---IDTSTAPLYETVMELT--NGIGADA  216 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEE---EETTTSCHHHHHHHHT--TTSCEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcEE---EeCCcccHHHHHHHHh--CCCCCcE
Confidence            367899999999999999999998899999999999988766544 554322   3555543333333322  1137999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       217 vid~~g~  223 (340)
T 3gms_A          217 AIDSIGG  223 (340)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999983

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.96  E-value=1.9e-05  Score=68.09  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++........|+   +++.        + +..
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~--------~-~~~  181 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP--------L-QTY  181 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC--------C-SCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc--------c-CCC
Confidence            3678999999998 8999999999999999999999999988888776532111112333   1110        1 478


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++||+++..
T Consensus       182 DivIn~t~~~  191 (272)
T 1p77_A          182 DLVINATSAG  191 (272)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEECCCCC
Confidence            9999999865

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.95  E-value=4.8e-05  Score=66.69  Aligned_cols=82  Identities=18%  Similarity=0.296  Sum_probs=59.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ---HQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~---~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+++..  .......++.+.+...+.+.   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---
Confidence            4689999999997 8999999999999998 79999999   7777777665521  12233446655433333333   


Q ss_pred             HHcCCccEEEECccCC
Q 022418          104 SKHNQLDIMYNNAGVA  119 (297)
Q Consensus       104 ~~~g~id~li~~ag~~  119 (297)
                          ..|++||+....
T Consensus       220 ----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ----SADILTNGTKVG  231 (312)
T ss_dssp             ----HCSEEEECSSTT
T ss_pred             ----CceEEEECCcCC
Confidence                469999987654

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.93  E-value=2.5e-05  Score=70.19  Aligned_cols=79  Identities=18%  Similarity=0.197  Sum_probs=60.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..++-+.|+|+|.|| |++|+.+++.|++ .++|.+.+++.+.+++..    ..+..+.+|++|.+++.++++       
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~~~~~~~~d~~d~~~l~~~~~-------   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----EFATPLKVDASNFDKLVEVMK-------   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----TTSEEEECCTTCHHHHHHHHT-------
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----ccCCcEEEecCCHHHHHHHHh-------
Confidence            345566668999998 9999999999865 578999999987766543    456778899999999888776       


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      +.|+||++++..
T Consensus        77 ~~DvVi~~~p~~   88 (365)
T 3abi_A           77 EFELVIGALPGF   88 (365)
T ss_dssp             TCSEEEECCCGG
T ss_pred             CCCEEEEecCCc
Confidence            579999998754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.91  E-value=2.3e-05  Score=68.43  Aligned_cols=77  Identities=18%  Similarity=0.277  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.++++....    ++.+.+++.+       .....
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~-------~~~~a  205 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAET-------RLAEY  205 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHH-------TGGGC
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHh-------hhccC
Confidence            578999999998 7999999999999998 899999999998888887643211    1112222222       23468


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++.+..
T Consensus       206 DivIn~t~~~  215 (297)
T 2egg_A          206 DIIINTTSVG  215 (297)
T ss_dssp             SEEEECSCTT
T ss_pred             CEEEECCCCC
Confidence            9999999865

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.88  E-value=6e-05  Score=68.02  Aligned_cols=78  Identities=21%  Similarity=0.201  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++.+++++|+|+ |+||.++++.+...|++|++++|+.++++...+.++..+.   .|.++.+++.+.+.       ..|
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~-------~aD  233 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVK-------RAD  233 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHH-------HCS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHc-------CCC
Confidence            689999999998 9999999999999999999999999888777665555432   24445555555543       479


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|++++..
T Consensus       234 vVi~~~~~p  242 (377)
T 2vhw_A          234 LVIGAVLVP  242 (377)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999998754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.86  E-value=0.00026  Score=62.50  Aligned_cols=115  Identities=17%  Similarity=0.221  Sum_probs=72.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCC-Cee-EEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGP-NAT-FIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~-~v~-~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++||||+|.+|..++..|+++|  ..|++++++.+  +....++.. ... .+.. +++..+..+.++       ..
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~-------ga   77 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG-FLGQQQLEAALT-------GM   77 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE-EESHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE-EeCCCCHHHHcC-------CC
Confidence            4689999999999999999999998  78999998776  222222211 110 1111 222334444333       68


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      |++|+.+|....+.     .+.   .+.+..|+..+..+.+.+.+.-   ..+.++++|.
T Consensus        78 DvVi~~ag~~~~~g-----~~r---~dl~~~N~~~~~~i~~~i~~~~---p~~~viv~SN  126 (326)
T 1smk_A           78 DLIIVPAGVPRKPG-----MTR---DDLFKINAGIVKTLCEGIAKCC---PRAIVNLISN  126 (326)
T ss_dssp             SEEEECCCCCCCSS-----CCC---SHHHHHHHHHHHHHHHHHHHHC---TTSEEEECCS
T ss_pred             CEEEEcCCcCCCCC-----CCH---HHHHHHHHHHHHHHHHHHHhhC---CCeEEEEECC
Confidence            99999999653111     111   2458889998888888877643   2344555443

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.85  E-value=5.1e-05  Score=67.50  Aligned_cols=80  Identities=21%  Similarity=0.245  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+||+|++|..++..+...|++|++++++.++.+... +++... .  .|..  +++.+.+.+... ..++|+
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~-v--~~~~--~~~~~~v~~~~~-~~g~Dv  230 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADI-V--LPLE--EGWAKAVREATG-GAGVDM  230 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE-E--EESS--TTHHHHHHHHTT-TSCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE-E--ecCc--hhHHHHHHHHhC-CCCceE
Confidence            35889999999999999999999999999999999988876544 455432 2  2443  233333332211 126999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|+++|.
T Consensus       231 vid~~g~  237 (342)
T 4eye_A          231 VVDPIGG  237 (342)
T ss_dssp             EEESCC-
T ss_pred             EEECCch
Confidence            9999983

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.84  E-value=7.3e-05  Score=67.07  Aligned_cols=78  Identities=19%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .+++++++|+|+ |++|++++..+...|++|++++|+.++++...+.....+..   +..+.+++.+.+.       ..|
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~D  232 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVA-------EAD  232 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHH-------TCS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCCHHHHHHHHc-------CCC
Confidence            477899999999 99999999999999999999999998887776554333322   2234444443332       689


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|++++..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.80  E-value=4.2e-05  Score=68.69  Aligned_cols=100  Identities=16%  Similarity=0.208  Sum_probs=69.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH---QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++|++|+|+|+ |++|..++..+...|++|++++++.   ++.+. .++++.  ..+  | ++ +-.+++. + . . +
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~ga--~~v--~-~~-~~~~~~~-~-~-~-~  245 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEETKT--NYY--N-SS-NGYDKLK-D-S-V-G  245 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHHTC--EEE--E-CT-TCSHHHH-H-H-H-C
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHhCC--cee--c-hH-HHHHHHH-H-h-C-C
Confidence            456999999999 9999999999999999999999998   76643 445553  223  5 44 2222222 2 2 2 5


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHH-HHHHHhccCCCCceEEEEeccc
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI-KHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      ++|++|+++|..  .                         .+ +.+++.++  ..|+++.++...
T Consensus       246 ~~d~vid~~g~~--~-------------------------~~~~~~~~~l~--~~G~iv~~g~~~  281 (366)
T 2cdc_A          246 KFDVIIDATGAD--V-------------------------NILGNVIPLLG--RNGVLGLFGFST  281 (366)
T ss_dssp             CEEEEEECCCCC--T-------------------------HHHHHHGGGEE--EEEEEEECSCCC
T ss_pred             CCCEEEECCCCh--H-------------------------HHHHHHHHHHh--cCCEEEEEecCC
Confidence            899999999853  1                         23 55666663  358898886543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.78  E-value=8.9e-05  Score=68.60  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEE--ec--------CCCHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--CD--------VTKESDVSDAVDF  101 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~--~D--------~s~~~~i~~~~~~  101 (297)
                      -.|++|+|+|++|++|...+..+...|++|+++++++++++.. ++++....+-.  .|        .++.++.+++.+.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence            4678999999999999999999999999999999988877655 45654322211  11        2355666666666


Q ss_pred             HHHHc--CCccEEEECcc
Q 022418          102 TISKH--NQLDIMYNNAG  117 (297)
Q Consensus       102 ~~~~~--g~id~li~~ag  117 (297)
                      +.+..  .++|++|.++|
T Consensus       306 i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHTSCCEEEEEECSC
T ss_pred             HHHHhCCCCCcEEEEcCC
Confidence            66543  27999999987

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.78  E-value=4.5e-05  Score=59.72  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=57.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      -+..+++++|.|+ |.+|..+++.|.+.|++|++++|+++..+.....  .....+..|.++++.+.+.      ...+.
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~~------~~~~a   85 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKEC------GMEKA   85 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHTT------TGGGC
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHHc------CcccC
Confidence            4567889999996 9999999999999999999999998876554311  2345667888886544321      12367


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |++|.+.+
T Consensus        86 d~Vi~~~~   93 (155)
T 2g1u_A           86 DMVFAFTN   93 (155)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEEeC
Confidence            99998775

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.76  E-value=0.00013  Score=64.80  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+|+ |++|..++..+...|++|+++++++++++... +++...   .+|.++.+ +.+.+.+..   +++|++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~---~~d~~~~~-~~~~~~~~~---~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADL---VVNPLKED-AAKFMKEKV---GGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSE---EECTTTSC-HHHHHHHHH---SSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCE---EecCCCcc-HHHHHHHHh---CCCCEE
Confidence            5789999999 88999999999999999999999988777654 455432   24776543 322333332   579999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |+++|.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.75  E-value=6.4e-05  Score=60.46  Aligned_cols=79  Identities=15%  Similarity=0.139  Sum_probs=60.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++.++.++|.|+ |.+|..+++.|.+. |++|+++++++++.+...+ .  .+..+..|.++++.+.++     ....+
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~--g~~~~~gd~~~~~~l~~~-----~~~~~  105 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E--GRNVISGDATDPDFWERI-----LDTGH  105 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T--TCCEEECCTTCHHHHHTB-----CSCCC
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C--CCCEEEcCCCCHHHHHhc-----cCCCC
Confidence            3567788999985 99999999999999 9999999999988776543 2  355677899987655432     01236


Q ss_pred             ccEEEECcc
Q 022418          109 LDIMYNNAG  117 (297)
Q Consensus       109 id~li~~ag  117 (297)
                      .|++|.+.+
T Consensus       106 ad~vi~~~~  114 (183)
T 3c85_A          106 VKLVLLAMP  114 (183)
T ss_dssp             CCEEEECCS
T ss_pred             CCEEEEeCC
Confidence            899997664

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.74  E-value=8.4e-05  Score=66.63  Aligned_cols=78  Identities=21%  Similarity=0.256  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|++|..+++.+...|++|+++++++++.+... +++...   ..|.++. ++.+.+.+..  .+++|++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~-~~~~~~~~~~--~~g~D~v  235 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDR---PINYKTE-PVGTVLKQEY--PEGVDVV  235 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSE---EEETTTS-CHHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcE---EEecCCh-hHHHHHHHhc--CCCCCEE
Confidence            5789999999999999999999999999999999987766554 455432   2355443 2333333331  1379999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |+++|
T Consensus       236 id~~g  240 (362)
T 2c0c_A          236 YESVG  240 (362)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99997

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.73  E-value=3.6e-05  Score=67.27  Aligned_cols=89  Identities=15%  Similarity=0.169  Sum_probs=62.3

Q ss_pred             CCCCCE-EEEEcCCC-----------------c-HHHHHHHHHHHCCCeEEEEeCCchhHH--------HHHHHh-----
Q 022418           31 KLEEKV-ALITGAAS-----------------G-IGKATAAKFISNGAKVVIADIQHQLGQ--------QTAKEL-----   78 (297)
Q Consensus        31 ~~~~k~-vlVtGas~-----------------g-iG~~ia~~l~~~G~~Vi~~~r~~~~~~--------~~~~~~-----   78 (297)
                      ++.||+ ||||+|.+                 | +|.++|++++++|+.|+++.+..+...        .+.+.+     
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            578888 99998876                 6 999999999999999999988543110        001110     


Q ss_pred             -CCCeeEEEecCCCHHHHHHHHHHH------------------------------HHHcCCccEEEECccCC
Q 022418           79 -GPNATFIACDVTKESDVSDAVDFT------------------------------ISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        79 -~~~v~~~~~D~s~~~~i~~~~~~~------------------------------~~~~g~id~li~~ag~~  119 (297)
                       ...+..+..|+...++..+.+...                              .+.++..|++|.+|++.
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence             122345666777766666666543                              23457899999999986

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.70  E-value=0.00029  Score=54.09  Aligned_cols=77  Identities=10%  Similarity=0.116  Sum_probs=59.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .++++ .++|.|+ |.+|..+++.|.+.|++|++++++++..+...+   ..+..+..|.++++.++++      ...+.
T Consensus         4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhc------CcccC
Confidence            44554 5777787 889999999999999999999999998877655   2467788999998766543      11367


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |.+|...+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88887664

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.70  E-value=0.00012  Score=62.99  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=57.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCC-CeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGP-NATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.. .+..  .++.+   +..         .
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~~~~---l~~---------~  180 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SRYEA---LEG---------Q  180 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--ECSGG---GTT---------C
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--eeHHH---hcc---------c
Confidence            4689999999998 7999999999999996 899999999999988887743 1222  22222   110         3


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ..|++||.....
T Consensus       181 ~~DivInaTp~g  192 (272)
T 3pwz_A          181 SFDIVVNATSAS  192 (272)
T ss_dssp             CCSEEEECSSGG
T ss_pred             CCCEEEECCCCC
Confidence            689999987653

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.68  E-value=0.00021  Score=63.56  Aligned_cols=77  Identities=17%  Similarity=0.253  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|++|...+..+...|++|+++++++++++...+ ++....   .|..+  ++.+.+.+.  ..+++|++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v---i~~~~--~~~~~~~~~--~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGADIV---LNHKE--SLLNQFKTQ--GIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCSEE---ECTTS--CHHHHHHHH--TCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEE---EECCc--cHHHHHHHh--CCCCccEE
Confidence            68999999999999999999999999999999998887666544 554322   24433  233333333  23479999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      ++++|
T Consensus       222 ~d~~g  226 (346)
T 3fbg_A          222 FCTFN  226 (346)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.67  E-value=0.0011  Score=58.12  Aligned_cols=144  Identities=13%  Similarity=0.126  Sum_probs=87.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeC--CchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADI--QHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r--~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++||||+|++|.+++..|+..|.  .+.++++  +.++++....++       +.++.....|    +++.+.+    
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al----   72 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII----   72 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG----
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh----
Confidence            4699999999999999999999885  5888888  654443221111       1122222111    1112222    


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc--------cc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL--------LG  175 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~--------~~  175 (297)
                         ...|++||.||....+     ..+.   .+.+..|+..+..+.+++..+-    .+.++++|.-...        .+
T Consensus        73 ---~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           73 ---DESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEIC----DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             ---TTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHC----CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             ---CCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHhC----CeEEEEecCcHHHHHHHHHHhhC
Confidence               3789999999965211     1222   4568999999999888887742    3445555443322        13


Q ss_pred             CCCCccchh-hHHHHHHHHHHHHHHHc
Q 022418          176 GLAQHTYSV-SKSAIIGLVKSMAAELC  201 (297)
Q Consensus       176 ~~~~~~Y~~-sK~a~~~~~~~la~el~  201 (297)
                      .++...++. +..-...+...+++.+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            455556777 55545566666666653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.67  E-value=0.00012  Score=63.83  Aligned_cols=74  Identities=18%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+|++|++|..++..+...|++|+++++++++.+... +++...   ..|..+.++.   .+.+    +++|++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~---~~~~~~~~~~---~~~~----~~~d~v  193 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEE---AATYAEVPER---AKAW----GGLDLV  193 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSE---EEEGGGHHHH---HHHT----TSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE---EEECCcchhH---HHHh----cCceEE
Confidence            5789999999999999999999999999999999988876653 455432   2355441222   2222    579999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |+ +|.
T Consensus       194 id-~g~  198 (302)
T 1iz0_A          194 LE-VRG  198 (302)
T ss_dssp             EE-CSC
T ss_pred             EE-CCH
Confidence            99 873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.66  E-value=8.8e-05  Score=64.13  Aligned_cols=74  Identities=12%  Similarity=0.254  Sum_probs=56.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.++++.  .+...  ++.+   +.          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l~----------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---LK----------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---CC----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---hc----------
Confidence            4689999999998 7999999999999996 899999999998888877642  23322  2211   10          


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                      ...|++||+....
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            3689999988654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.65  E-value=0.00021  Score=64.05  Aligned_cols=76  Identities=17%  Similarity=0.229  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+|+ |++|..++..+...|++|+++++++++.+...++++...   ..|..+.+.+.++       .+++|++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~~-------~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS---FLVSRDQEQMQAA-------AGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE---EEETTCHHHHHHT-------TTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce---EEeccCHHHHHHh-------hCCCCEE
Confidence            6899999996 999999999999999999999999988877665666432   2466665433322       2479999


Q ss_pred             EECccCC
Q 022418          113 YNNAGVA  119 (297)
Q Consensus       113 i~~ag~~  119 (297)
                      |.++|..
T Consensus       256 id~~g~~  262 (366)
T 1yqd_A          256 IDTVSAV  262 (366)
T ss_dssp             EECCSSC
T ss_pred             EECCCcH
Confidence            9999853

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.63  E-value=0.00016  Score=59.87  Aligned_cols=74  Identities=24%  Similarity=0.241  Sum_probs=59.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |.++|.|+ |.+|.++++.|.++|++|++++++++..+...+..  .+.++..|.++++.++++      ...+.|++|.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a------~i~~ad~vi~   71 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDA------EVSKNDVVVI   71 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHH------TCCTTCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhc------CcccCCEEEE
Confidence            46899997 99999999999999999999999999888766553  467789999998766543      1236799986


Q ss_pred             Ccc
Q 022418          115 NAG  117 (297)
Q Consensus       115 ~ag  117 (297)
                      ..+
T Consensus        72 ~~~   74 (218)
T 3l4b_C           72 LTP   74 (218)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.60  E-value=0.0015  Score=56.97  Aligned_cols=141  Identities=14%  Similarity=0.081  Sum_probs=82.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeC--CchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADI--QHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r--~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ++++||||+|.+|.+++..|+..|.  .+.++++  +.++++....++      ...+.... |  +.+.          
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----------   67 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----------   67 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------
Confidence            4799999999999999999999875  5888898  665544322222      12222222 2  2221          


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc--------ccC
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL--------LGG  176 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~--------~~~  176 (297)
                       +...|++|+.||....+     ..+.   .+.+..|+..+..+.+.+..+   ...+.++++|.-...        .+.
T Consensus        68 -~~~aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           68 -TAGSDVVVITAGIPRQP-----GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             -GTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred             -hCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCChHHHHHHHHHHHcCC
Confidence             23789999999965211     1233   345888998888888877653   123444444332222        123


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHH
Q 022418          177 LAQHTYSV-SKSAIIGLVKSMAAEL  200 (297)
Q Consensus       177 ~~~~~Y~~-sK~a~~~~~~~la~el  200 (297)
                      ++....+. +..-...+-..+++.+
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l  160 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEF  160 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             CHHHeeecccchhHHHHHHHHHHHh
Confidence            33344555 3222344445555554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.59  E-value=0.00016  Score=64.31  Aligned_cols=76  Identities=20%  Similarity=0.380  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++++|+||+|++|...+..+...|++|+++ ++.++++. .++++...    +| .+.+ +.+.+.+... ..++|++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~lGa~~----i~-~~~~-~~~~~~~~~~-~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDLGATP----ID-ASRE-PEDYAAEHTA-GQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHHTSEE----EE-TTSC-HHHHHHHHHT-TSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHcCCCE----ec-cCCC-HHHHHHHHhc-CCCceEE
Confidence            68899999999999999999999999999998 77766554 45565432    45 3332 3333333321 1379999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |.++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.56  E-value=0.00045  Score=61.75  Aligned_cols=84  Identities=19%  Similarity=0.148  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|++|+|+|+ |++|...+......|++ |+++++++++.+...+. ...+..+..|-.+.+++.+.+.+... ..++|
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~D  254 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFG-GIEPA  254 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTS-SCCCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhC-CCCCC
Confidence            35789999998 99999999888889997 99999998887766554 55555556665566665554444321 13799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      +++.++|.
T Consensus       255 vvid~~g~  262 (363)
T 3m6i_A          255 VALECTGV  262 (363)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999883

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.55  E-value=5.1e-05  Score=58.61  Aligned_cols=71  Identities=13%  Similarity=0.127  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.+++.++++..+    .+..+   +.+.++       ..|++|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~----~~~~~---~~~~~~-------~~Divi   85 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY----VLIND---IDSLIK-------NNDVII   85 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE----EECSC---HHHHHH-------TCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce----EeecC---HHHHhc-------CCCEEE
Confidence            899999997 999999999999999999999999999888877765321    12333   233333       579999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      ++.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            988744

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.49  E-value=0.0004  Score=62.39  Aligned_cols=77  Identities=22%  Similarity=0.253  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+||+|++|...+..+...|++|+++++ .++.+. .++++....   .|.++.+-.+    .+.+ .+++|+
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lGa~~v---~~~~~~~~~~----~~~~-~~g~D~  251 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLGADDV---IDYKSGSVEE----QLKS-LKPFDF  251 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTTCSEE---EETTSSCHHH----HHHT-SCCBSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcCCCEE---EECCchHHHH----HHhh-cCCCCE
Confidence            36889999999999999999998899999998884 455444 456654322   3555533222    2222 257999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       252 vid~~g~  258 (375)
T 2vn8_A          252 ILDNVGG  258 (375)
T ss_dssp             EEESSCT
T ss_pred             EEECCCC
Confidence            9999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.44  E-value=0.0028  Score=54.60  Aligned_cols=41  Identities=20%  Similarity=0.175  Sum_probs=35.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      +++.|.|+ |.+|.+++..|++.|++|++.+|+++.++...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            67888876 889999999999999999999999987766554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.40  E-value=0.0005  Score=58.30  Aligned_cols=79  Identities=18%  Similarity=0.353  Sum_probs=57.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHh---CC--CeeE
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH-------------------QLGQQTAKEL---GP--NATF   84 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~---~~--~v~~   84 (297)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++++++++.                   .+.+..++.+   .+  ++..
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  105 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  105 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence            3588899999997 7999999999999997 799999987                   5666655544   33  3445


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCccEEEECcc
Q 022418           85 IACDVTKESDVSDAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        85 ~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag  117 (297)
                      +..+++ .+.+.++++       ..|++|.+..
T Consensus       106 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             ECSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             EeccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            555565 344444433       5799997764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.37  E-value=0.00054  Score=62.34  Aligned_cols=74  Identities=22%  Similarity=0.429  Sum_probs=57.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++++|+.++.++..++++..  .  .+.   +++.+.+.       ..
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~--~--~~~---~~l~~~l~-------~a  228 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--A--VRF---DELVDHLA-------RS  228 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--E--CCG---GGHHHHHH-------TC
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--e--ecH---HhHHHHhc-------CC
Confidence            478999999998 9999999999999999 8999999998887777776542  1  222   23333332       67


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++.|..
T Consensus       229 DvVi~at~~~  238 (404)
T 1gpj_A          229 DVVVSATAAP  238 (404)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEccCCC
Confidence            9999998743

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.34  E-value=0.0005  Score=61.09  Aligned_cols=103  Identities=18%  Similarity=0.238  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++.+... +++...   ..|..+.+ +.+.+.++.. ..++|+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~-~~~~v~~~~~-g~g~D~  239 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADY---VINPFEED-VVKEVMDITD-GNGVDV  239 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSE---EECTTTSC-HHHHHHHHTT-TSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCE---EECCCCcC-HHHHHHHHcC-CCCCCE
Confidence            7899999999 9999999999999999 8999999987766554 455432   23555433 2222222211 126999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      +|.++|..                           ..++.+++.++  ..|+++.+++..
T Consensus       240 vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  270 (348)
T 2d8a_A          240 FLEFSGAP---------------------------KALEQGLQAVT--PAGRVSLLGLYP  270 (348)
T ss_dssp             EEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             EEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEEccCC
Confidence            99999831                           02345556663  358899887643

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.29  E-value=0.001  Score=59.18  Aligned_cols=82  Identities=18%  Similarity=0.159  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHH-HcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTIS-KHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~-~~g~i  109 (297)
                      -.|++|+|+|+ |++|...+..+...|++|+++++++++++.. ++++...   ..|.++ .+..+++.+...+ ..+++
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~---~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGADV---TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE---EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCE---EEcCcccccHHHHHHHHhccccCCCC
Confidence            35789999997 9999999998888999999999998876654 4565442   234443 2222333222210 02369


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.29  E-value=0.00029  Score=62.07  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=51.4

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +++|+|++|++|...+..+...|++|+++++++++++.. ++++....   .|..+.+  .+.++.+.  .+++|++|.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~~--~~~~~~~~--~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEV---LAREDVM--AERIRPLD--KQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEE---EECC-----------CC--SCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcEE---EecCCcH--HHHHHHhc--CCcccEEEEC
Confidence            799999999999999999889999999999998877665 44654322   3554432  22222221  2379999999


Q ss_pred             ccC
Q 022418          116 AGV  118 (297)
Q Consensus       116 ag~  118 (297)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.28  E-value=0.00083  Score=60.08  Aligned_cols=79  Identities=16%  Similarity=0.195  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+| +|++|...+..+...|++|+++++++++++.. ++++....   .| .+.+++.+.+.++.. ..++|+
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v---i~-~~~~~~~~~v~~~~~-g~g~D~  260 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADHG---IN-RLEEDWVERVYALTG-DRGADH  260 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEE---EE-TTTSCHHHHHHHHHT-TCCEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCEE---Ec-CCcccHHHHHHHHhC-CCCceE
Confidence            3578999999 89999999999889999999999998877664 45654322   24 333333333333322 127999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|.++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.28  E-value=0.0024  Score=54.67  Aligned_cols=66  Identities=23%  Similarity=0.276  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. +++  +...  ++.+.              ...|++|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~--~~~~--~~~~l--------------~~~DiVI  177 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG--CDCF--MEPPK--------------SAFDLII  177 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT--CEEE--SSCCS--------------SCCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC--CeEe--cHHHh--------------ccCCEEE
Confidence            899999997 99999999999999999999999999998888 665  2222  22221              1579999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      |+....
T Consensus       178 naTp~G  183 (269)
T 3phh_A          178 NATSAS  183 (269)
T ss_dssp             ECCTTC
T ss_pred             EcccCC
Confidence            987654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.27  E-value=0.00015  Score=59.67  Aligned_cols=43  Identities=19%  Similarity=0.353  Sum_probs=37.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      ++++|+||+|.+|.++++.|++.|++|++.+|+.++.+...+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3688999999999999999999999999999998877766554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.26  E-value=0.0022  Score=56.26  Aligned_cols=116  Identities=19%  Similarity=0.237  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCC---HHHHHHHHHHHHHHcCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGPNATFIACDVTK---ESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~---~~~i~~~~~~~~~~~g~i  109 (297)
                      +++.|+||+|.+|..++..|++.|  ..|+++|++.  .+....++......  .++..   ..+.++.++       ..
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~--~~l~~~~~t~d~~~a~~-------~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR--ATVKGYLGPEQLPDCLK-------GC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS--CEEEEEESGGGHHHHHT-------TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC--ceEEEecCCCCHHHHhC-------CC
Confidence            468999999999999999999988  6899999987  23333333221100  11111   112333333       68


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccc
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTG  172 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~  172 (297)
                      |++|+.+|....+.     .+.   .+.+..|+.....+.+.+.++-   ..+.++++|.-..
T Consensus        70 DvVvi~ag~~~~~g-----~~r---~dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv~  121 (314)
T 1mld_A           70 DVVVIPAGVPRKPG-----MTR---DDLFNTNATIVATLTAACAQHC---PDAMICIISNPVN  121 (314)
T ss_dssp             SEEEECCSCCCCTT-----CCG---GGGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCHH
T ss_pred             CEEEECCCcCCCCC-----CcH---HHHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCcc
Confidence            99999999763221     121   2346777777777777666543   4577888765443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.21  E-value=0.0015  Score=57.68  Aligned_cols=77  Identities=14%  Similarity=0.158  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++++|+|+ |++|...+..+...|++|+++++++++.+.. ++++....   .|..+.+-.+.+.+    ..+++|+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~~~~~~~~~----~~g~~d~  235 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVA---VNARDTDPAAWLQK----EIGGAHG  235 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEE---EETTTSCHHHHHHH----HHSSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCEE---EeCCCcCHHHHHHH----hCCCCCE
Confidence            46789999997 8999999998888999999999998877654 45654322   35555433333332    3358999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      +|.++|
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            999987

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.21  E-value=0.00054  Score=57.27  Aligned_cols=72  Identities=17%  Similarity=0.152  Sum_probs=56.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...    ..+.++..|.++++.++++      .....|.+|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKA------NVRGARAVI   76 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHT------TCTTCSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhc------CcchhcEEE
Confidence            357889998 8999999999999999 999999988776654    3477889999998766543      123678888


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      ...+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            6653

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.0016  Score=58.17  Aligned_cols=78  Identities=15%  Similarity=0.226  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|+|+ |++|...+...... |++|+++++++++.+... +++....   .|..+.  +.+.+.++.. ..++|+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v---i~~~~~--~~~~v~~~~~-g~g~Dv  257 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHV---VDARRD--PVKQVMELTR-GRGVNV  257 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEE---EETTSC--HHHHHHHHTT-TCCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEE---Eeccch--HHHHHHHHhC-CCCCcE
Confidence            5789999999 89999998888888 999999999988776654 5654322   355553  3333333321 126999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       258 vid~~G~  264 (359)
T 1h2b_A          258 AMDFVGS  264 (359)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.17  E-value=0.00098  Score=59.44  Aligned_cols=75  Identities=16%  Similarity=0.239  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+|+|+|+ |++|...+..+...|++|+++++++++.+...++++....   .|..+.+.+.+    +   .+++|++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v---i~~~~~~~~~~----~---~~g~D~v  248 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY---VIGSDQAKMSE----L---ADSLDYV  248 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE---EETTCHHHHHH----S---TTTEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee---eccccHHHHHH----h---cCCCCEE
Confidence            6889999995 9999999988888999999999998887766656654322   35555433322    1   2479999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |.++|.
T Consensus       249 id~~g~  254 (357)
T 2cf5_A          249 IDTVPV  254 (357)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.15  E-value=0.0015  Score=58.72  Aligned_cols=82  Identities=21%  Similarity=0.304  Sum_probs=57.8

Q ss_pred             CCCCEEEEEc-CCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITG-AASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtG-as~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|.+++|.| |+|++|...+......|++|+++++++++.+... +++....   .|..+.+-.+++.+.....  ++|
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~---~~~~~~~~~~~v~~~t~~~--g~d  242 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHV---CNAASPTFMQDLTEALVST--GAT  242 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCE---EETTSTTHHHHHHHHHHHH--CCC
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEE---EeCCChHHHHHHHHHhcCC--Cce
Confidence            4678999997 9999999999888889999999999988776554 4654322   3444433333333322222  699


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|.++|..
T Consensus       243 ~v~d~~g~~  251 (379)
T 3iup_A          243 IAFDATGGG  251 (379)
T ss_dssp             EEEESCEEE
T ss_pred             EEEECCCch
Confidence            999999853

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0015  Score=58.55  Aligned_cols=80  Identities=15%  Similarity=0.232  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~i  109 (297)
                      -.|++|+|+|+ |++|...+..+...|+ +|+++++++++++.. ++++...   ..|.++ .+++.+.+.++..  +++
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~---vi~~~~~~~~~~~~~~~~~~--~g~  263 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD---FVNPNDHSEPISQVLSKMTN--GGV  263 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE---EECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCce---EEeccccchhHHHHHHHHhC--CCC
Confidence            35789999995 9999999998888999 799999998887755 4555432   134443 1234444444432  479


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       264 D~vid~~g~  272 (374)
T 1cdo_A          264 DFSLECVGN  272 (374)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.15  E-value=0.00055  Score=60.70  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++++|+|+ |++|...+..+...|+ +|+++++++++.+...+ + ..   ...|..+. ++.+.+.++.  .+++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~---~v~~~~~~-~~~~~~~~~~--~~g~D~  234 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-AD---RLVNPLEE-DLLEVVRRVT--GSGVEV  234 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CS---EEECTTTS-CHHHHHHHHH--SSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HH---hccCcCcc-CHHHHHHHhc--CCCCCE
Confidence            7899999999 9999999998888999 89999998876544322 2 11   12455543 3333344333  347999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       235 vid~~g~  241 (343)
T 2dq4_A          235 LLEFSGN  241 (343)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.14  E-value=0.0037  Score=55.60  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCC--CHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVT--KESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s--~~~~i~~~~~~~~~~~g~  108 (297)
                      -.|++|+|+|+ |++|...+......|+ +|+++++++++.+.. ++++... .  .|..  +.++..+.+.+...  ++
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~~i~~~~~--~g  242 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADL-V--LQISKESPQEIARKVEGQLG--CK  242 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSE-E--EECSSCCHHHHHHHHHHHHT--SC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE-E--EcCcccccchHHHHHHHHhC--CC
Confidence            35789999996 9999999988888999 899999988876654 4565432 2  3444  22333333333222  47


Q ss_pred             ccEEEECccC
Q 022418          109 LDIMYNNAGV  118 (297)
Q Consensus       109 id~li~~ag~  118 (297)
                      +|++|.++|.
T Consensus       243 ~D~vid~~g~  252 (356)
T 1pl8_A          243 PEVTIECTGA  252 (356)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999973

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.11  E-value=0.00016  Score=62.39  Aligned_cols=73  Identities=21%  Similarity=0.222  Sum_probs=51.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++..    .+...     ..+++.+.       ...
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----~~~~~-----~~~~~~~~-------~~~  175 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----NINKI-----NLSHAESH-------LDE  175 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----CCEEE-----CHHHHHHT-------GGG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----hcccc-----cHhhHHHH-------hcC
Confidence            3688999999997 8999999999999999 89999999887655432    12211     12233222       235


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|++||.....
T Consensus       176 aDiVInaTp~G  186 (277)
T 3don_A          176 FDIIINTTPAG  186 (277)
T ss_dssp             CSEEEECCC--
T ss_pred             CCEEEECccCC
Confidence            79999987643

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.0021  Score=57.54  Aligned_cols=74  Identities=16%  Similarity=0.272  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+|+|+|+ |++|...+......|++|+++++++++.+... +++...   ..|..+.+.++    ++.   +++|++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~---vi~~~~~~~~~----~~~---~g~Dvv  261 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADE---VVNSRNADEMA----AHL---KSFDFI  261 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE---EEETTCHHHHH----TTT---TCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcE---EeccccHHHHH----Hhh---cCCCEE
Confidence            5789999998 89999999888889999999999988877654 465432   23666554332    221   479999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |.++|.
T Consensus       262 id~~g~  267 (369)
T 1uuf_A          262 LNTVAA  267 (369)
T ss_dssp             EECCSS
T ss_pred             EECCCC
Confidence            999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.10  E-value=0.0021  Score=57.56  Aligned_cols=79  Identities=13%  Similarity=0.095  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++|+|+|++|++|...+......|++|+++. ++++++ ..++++....   .|..+.+ +.+.+.++.  .+++|+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~v---i~~~~~~-~~~~v~~~t--~g~~d~  234 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEEV---FDYRAPN-LAQTIRTYT--KNNLRY  234 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSEE---EETTSTT-HHHHHHHHT--TTCCCE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcEE---EECCCch-HHHHHHHHc--cCCccE
Confidence            5789999999999999999999889999998886 555555 5566664322   3555543 222233221  246999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      ++.++|.
T Consensus       235 v~d~~g~  241 (371)
T 3gqv_A          235 ALDCITN  241 (371)
T ss_dssp             EEESSCS
T ss_pred             EEECCCc
Confidence            9999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.08  E-value=0.0033  Score=56.50  Aligned_cols=80  Identities=16%  Similarity=0.144  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCC--CHHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVT--KESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s--~~~~i~~~~~~~~~~~g~i  109 (297)
                      .|++|+|+| +|++|...+..+...| ++|+++++++++.+... +++... .  .|..  +.+++.+.+.++.. ..++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~-v--i~~~~~~~~~~~~~v~~~~~-g~g~  268 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADL-T--LNRRETSVEERRKAIMDITH-GRGA  268 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSE-E--EETTTSCHHHHHHHHHHHTT-TSCE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcE-E--EeccccCcchHHHHHHHHhC-CCCC
Confidence            578999999 8999999999888899 59999999988776554 565432 2  2443  23444333333321 1269


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       269 Dvvid~~g~  277 (380)
T 1vj0_A          269 DFILEATGD  277 (380)
T ss_dssp             EEEEECSSC
T ss_pred             cEEEECCCC
Confidence            999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.07  E-value=0.0035  Score=54.27  Aligned_cols=86  Identities=17%  Similarity=0.237  Sum_probs=59.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc------------------hhHHHHHHHh---C--CCeeEE
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH------------------QLGQQTAKEL---G--PNATFI   85 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~------------------~~~~~~~~~~---~--~~v~~~   85 (297)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+..++.+   .  .++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4689999999998 8999999999999997 688888765                  3444333333   3  345566


Q ss_pred             EecCCCHHHHHHHHHHHHHH----cCCccEEEECc
Q 022418           86 ACDVTKESDVSDAVDFTISK----HNQLDIMYNNA  116 (297)
Q Consensus        86 ~~D~s~~~~i~~~~~~~~~~----~g~id~li~~a  116 (297)
                      ..++++.+.+.++++.+...    ....|+||.+.
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            66777766676666544221    13678888555

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.05  E-value=0.0011  Score=59.18  Aligned_cols=75  Identities=17%  Similarity=0.193  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++.+... +++....   .|..+.++   ..+.+.   +++|++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v---~~~~~~~~---~~~~~~---~~~D~v  247 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHY---IATLEEGD---WGEKYF---DTFDLI  247 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEE---EEGGGTSC---HHHHSC---SCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCEE---EcCcCchH---HHHHhh---cCCCEE
Confidence            5789999999 99999999988889999999999988776654 4654322   24433201   122221   479999


Q ss_pred             EECccC
Q 022418          113 YNNAGV  118 (297)
Q Consensus       113 i~~ag~  118 (297)
                      |.++|.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.05  E-value=0.0019  Score=57.94  Aligned_cols=79  Identities=15%  Similarity=0.298  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.. ++++...   ..|.++ .+++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~---vi~~~~~~~~~~~~~~~~~~--~g~D  263 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATE---CVNPQDYKKPIQEVLTEMSN--GGVD  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE---EECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCce---EecccccchhHHHHHHHHhC--CCCc
Confidence            5789999995 9999999998888999 799999998877655 4555432   134443 1234444443322  4799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       264 ~vid~~g~  271 (374)
T 2jhf_A          264 FSFEVIGR  271 (374)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.04  E-value=0.0016  Score=58.18  Aligned_cols=77  Identities=17%  Similarity=0.235  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++++|+||+|++|...+..... .|++|+++++++++.+.. ++++....   .|..+  ++.+.+.++  ..+++|+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~v---i~~~~--~~~~~v~~~--~~~g~Dv  242 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHHV---IDHSK--PLAAEVAAL--GLGAPAF  242 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSEE---ECTTS--CHHHHHHTT--CSCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCEE---EeCCC--CHHHHHHHh--cCCCceE
Confidence            688999999999999888776655 589999999998876655 44654322   24443  222223222  2247999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.++|
T Consensus       243 vid~~g  248 (363)
T 4dvj_A          243 VFSTTH  248 (363)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999887

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.02  E-value=0.0019  Score=57.61  Aligned_cols=82  Identities=13%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             CC-CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHhCCCeeEEEecCCCH--HHHHHHHHHHHH-H
Q 022418           33 EE-KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG---QQTAKELGPNATFIACDVTKE--SDVSDAVDFTIS-K  105 (297)
Q Consensus        33 ~~-k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~---~~~~~~~~~~v~~~~~D~s~~--~~i~~~~~~~~~-~  105 (297)
                      .| .+|+|+||+|++|...+......|++|++++++.+++   .+..++++....+   |..+.  +++.+.+.++.. .
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence            46 8999999999999999888888999999998776652   2344566643222   22210  122222333220 1


Q ss_pred             cCCccEEEECcc
Q 022418          106 HNQLDIMYNNAG  117 (297)
Q Consensus       106 ~g~id~li~~ag  117 (297)
                      .+++|++|.++|
T Consensus       243 ~~g~Dvvid~~G  254 (364)
T 1gu7_A          243 GGEAKLALNCVG  254 (364)
T ss_dssp             TCCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            247999999987

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.02  E-value=0.0011  Score=59.69  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|.+|+|+|+ |++|...+......|+ +|+++++++++++. +++++...   ..|..+ .+++.+.+.++.  .+++|
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~---vi~~~~~~~~~~~~i~~~~--~gg~D  265 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AKKFGVNE---FVNPKDHDKPIQEVIVDLT--DGGVD  265 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HHTTTCCE---EECGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHcCCcE---EEccccCchhHHHHHHHhc--CCCCC
Confidence            5789999998 9999999988888999 79999999988774 45565432   234432 233444444432  23799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       266 ~vid~~g~  273 (378)
T 3uko_A          266 YSFECIGN  273 (378)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.01  E-value=0.0026  Score=57.08  Aligned_cols=79  Identities=18%  Similarity=0.258  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.. ++++....   .|.++ .+++.+.+.++..  +++|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~~~~~~~~v~~~~~--~g~D  267 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATDC---LNPRELDKPVQDVITELTA--GGVD  267 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEE---ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCcEE---EccccccchHHHHHHHHhC--CCcc
Confidence            5789999996 9999999988888999 799999998887655 45654321   34442 1233333443332  4799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       268 vvid~~G~  275 (376)
T 1e3i_A          268 YSLDCAGT  275 (376)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.98  E-value=0.0014  Score=58.18  Aligned_cols=71  Identities=15%  Similarity=0.261  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+|+|+|+ |++|...+......|++|+++++++++.+.. ++++....+     ++.+.+.+          ++|+
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~-----~~~~~~~~----------~~D~  237 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHFY-----TDPKQCKE----------ELDF  237 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEEE-----SSGGGCCS----------CEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCeec-----CCHHHHhc----------CCCE
Confidence            46889999997 9999999998888999999999999887754 446644332     34433221          7999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      ++.++|..
T Consensus       238 vid~~g~~  245 (348)
T 3two_A          238 IISTIPTH  245 (348)
T ss_dssp             EEECCCSC
T ss_pred             EEECCCcH
Confidence            99999843

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.98  E-value=0.0015  Score=58.57  Aligned_cols=81  Identities=23%  Similarity=0.250  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHH-HHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTI-SKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~-~~~g~i  109 (297)
                      -.|++|+|+|+ |++|...+......|+ +|+++++++++.+ ..++++...   ..|.++.+-.+. +.+.. ...+++
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~---vi~~~~~~~~~~-i~~~~~~~~gg~  254 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATA---TVDPSAGDVVEA-IAGPVGLVPGGV  254 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSE---EECTTSSCHHHH-HHSTTSSSTTCE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCE---EECCCCcCHHHH-HHhhhhccCCCC
Confidence            35789999998 9999999988888999 7888988887765 445565432   235555432222 22200 112479


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       255 Dvvid~~G~  263 (370)
T 4ej6_A          255 DVVIECAGV  263 (370)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.98  E-value=0.0014  Score=58.05  Aligned_cols=119  Identities=17%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++++.|+|++|.+|..++..++.+|.  +|+++|.+.++++....++.... +...++.-..+..+.+       ...|
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~t~d~~~al-------~dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTFTSDIKEAL-------TDAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEEESCHHHHH-------TTEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEEcCCHHHHh-------CCCC
Confidence            457899999999999999999999984  79999998877665433331100 0001111011122222       2689


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCce-EEEEecc
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGC-ILCTASV  170 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~-iv~vss~  170 (297)
                      ++|..+|.... +    ..+   -.+.+..|+.-...+.+.+..+-   ..+. ++++|.-
T Consensus        79 vVvitaG~p~k-p----G~~---R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvsNP  128 (343)
T 3fi9_A           79 YIVSSGGAPRK-E----GMT---REDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIFNP  128 (343)
T ss_dssp             EEEECCC------------C---HHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECSSS
T ss_pred             EEEEccCCCCC-C----CCC---HHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEecCc
Confidence            99999996421 1    122   24557777776666666655542   3453 6666643

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.97  E-value=0.002  Score=57.63  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+... +++....   .|.++ .+++.+.+.++..  +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~v---i~~~~~~~~~~~~v~~~~~--~g~D  262 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATEC---INPQDFSKPIQEVLIEMTD--GGVD  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEE---ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceE---eccccccccHHHHHHHHhC--CCCC
Confidence            5789999996 9999999988888999 7999999988776554 5554322   34433 1233333443322  4799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       263 ~vid~~g~  270 (373)
T 2fzw_A          263 YSFECIGN  270 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCc
Confidence            99999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.96  E-value=0.0015  Score=57.25  Aligned_cols=74  Identities=19%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+++|+||+|++|...+..+...|++|+++++.. + .+..++++...   ..|..+.+.+.+.       ..++|+
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~lGa~~---~i~~~~~~~~~~~-------~~g~D~  218 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKALGAEQ---CINYHEEDFLLAI-------STPVDA  218 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHHTCSE---EEETTTSCHHHHC-------CSCEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHcCCCE---EEeCCCcchhhhh-------ccCCCE
Confidence            4678999999999999999999999999999888544 3 44556666542   2355544322221       247999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.++|
T Consensus       219 v~d~~g  224 (321)
T 3tqh_A          219 VIDLVG  224 (321)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.96  E-value=0.0026  Score=57.63  Aligned_cols=80  Identities=26%  Similarity=0.270  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|.+|+|+|+ |++|...+......|+ +|+++++++++++.. ++++....   .|..+.+-.+++ .++.. ..++|
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~v---i~~~~~~~~~~i-~~~t~-g~g~D  284 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHV---IDPTKENFVEAV-LDYTN-GLGAK  284 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSEE---ECTTTSCHHHHH-HHHTT-TCCCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCEE---EcCCCCCHHHHH-HHHhC-CCCCC
Confidence            46789999998 9999999988888999 899999988776644 55654322   355443323222 22211 12699


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       285 ~vid~~g~  292 (404)
T 3ip1_A          285 LFLEATGV  292 (404)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCC
Confidence            99999984

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.95  E-value=0.012  Score=50.40  Aligned_cols=166  Identities=10%  Similarity=0.058  Sum_probs=98.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHH-CCCeEE-EEeCCchhH--H-----------------HHHHHhCCCeeEEEecCCC
Q 022418           33 EEKVALITGAASGIGKATAAKFIS-NGAKVV-IADIQHQLG--Q-----------------QTAKELGPNATFIACDVTK   91 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi-~~~r~~~~~--~-----------------~~~~~~~~~v~~~~~D~s~   91 (297)
                      +.+++.|+|++|.+|+.+++.+.+ .|+.++ +++++.+..  +                 +..+.+. .+. +..|++.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~D-vVIDft~   81 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFD-VFIDFTR   81 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCS-EEEECSC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCC-EEEEcCC
Confidence            446899999999999999999885 567765 556554320  0                 0001111 222 4559999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHH----------Hh----hhHHHHHHHHHHHhcc
Q 022418           92 ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR----------IN----VRGVVAGIKHSTRVMI  157 (297)
Q Consensus        92 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~----------~n----~~~~~~l~~~~~~~l~  157 (297)
                      ++...+.++.+.+.  ++++++-..|..           .++.++..+          .|    +.-.+.+++.+.+.+.
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~~-----------~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~  148 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGFD-----------EAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG  148 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCCC-----------HHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCCC-----------HHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence            99998888888766  677887666532           232222221          11    1123445555555553


Q ss_pred             CCCCceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHc---------------cCCcEEEEEeCCCccCc
Q 022418          158 PRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC---------------EYGIRINCISPFAIPTP  218 (297)
Q Consensus       158 ~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~---------------~~~i~v~~v~pG~v~t~  218 (297)
                      .   +.=|-|  +..+...+--.+|+.++...+.+.+.+...+.               +.+|.+.+++-|-+-++
T Consensus       149 ~---~~diei--iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          149 D---YTDIEI--IEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             T---TSEEEE--EEEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             C---CCCEEE--EEeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            1   111211  22344444456789999888888766554321               34789999997666654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.87  E-value=0.0029  Score=56.70  Aligned_cols=79  Identities=14%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|+|+|+ |++|...+......|+ +|+++++++++.+.. ++++....   .|..+ .+++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~~~~~~~~i~~~t~--gg~D  263 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATEC---LNPKDYDKPIYEVICEKTN--GGVD  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSEE---ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEE---EecccccchHHHHHHHHhC--CCCC
Confidence            5789999995 9999999988888899 799999998877655 45654322   24432 1223333333322  4799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       264 vvid~~g~  271 (373)
T 1p0f_A          264 YAVECAGR  271 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999973

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.82  E-value=0.0075  Score=53.30  Aligned_cols=77  Identities=14%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISN--GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|+|+|+ |++|...+......  |++|+++++++++.+... +++....   .|..+.   .+.++++.+ ..++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v---i~~~~~---~~~~~~~~~-g~g~D  240 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYV---SEMKDA---ESLINKLTD-GLGAS  240 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEE---ECHHHH---HHHHHHHHT-TCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEE---eccccc---hHHHHHhhc-CCCcc
Confidence            6899999999 89999999888888  999999999988766554 4554321   233220   123333332 22799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999973

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.76  E-value=0.0035  Score=57.12  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=56.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ++.++|.|. |.+|+.+++.|.+.|+.|++++++++..+...+.   .+.++..|.++++.++++      ...+.|.+|
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~---g~~vi~GDat~~~~L~~a------gi~~A~~vi   73 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF---GMKVFYGDATRMDLLESA------GAAKAEVLI   73 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT---TCCCEESCTTCHHHHHHT------TTTTCSEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC---CCeEEEcCCCCHHHHHhc------CCCccCEEE
Confidence            356889997 8899999999999999999999999988776542   355677888888766544      112567777


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      ...+
T Consensus        74 v~~~   77 (413)
T 3l9w_A           74 NAID   77 (413)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            5553

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.75  E-value=0.0056  Score=55.50  Aligned_cols=48  Identities=25%  Similarity=0.289  Sum_probs=41.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      ++.+++|+|+|+ |.+|..+++.+...|++|++++++.+.++.. ++++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa  216 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGA  216 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCC
Confidence            478999999997 8999999999999999999999999887765 44443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.74  E-value=0.0012  Score=57.70  Aligned_cols=83  Identities=16%  Similarity=0.159  Sum_probs=57.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeE-EEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF-IACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~-~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+++||+++|.|++.-+|+.+++.|+..|++|++++|+..++.+..+++....+. ..+..++++++.+.+.       .
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~  245 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------D  245 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------c
Confidence            3799999999999988999999999999999999998844332222222222221 1112244566776666       3


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|++|...|..
T Consensus       246 ADIVIsAtg~p  256 (320)
T 1edz_A          246 SDVVITGVPSE  256 (320)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCCC
Confidence            59999998853

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.74  E-value=0.0042  Score=53.95  Aligned_cols=73  Identities=16%  Similarity=0.237  Sum_probs=53.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++|.|+ |.+|+++++.+...|++|++.+|+.++.+...+ .+.  ..+  +   .+++.+++       ...
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~--~~~--~---~~~l~~~l-------~~a  216 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MGL--VPF--H---TDELKEHV-------KDI  216 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC--EEE--E---GGGHHHHS-------TTC
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCC--eEE--c---hhhHHHHh-------hCC
Confidence            5799999999997 999999999999999999999999876554433 332  222  1   12233333       367


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|+....
T Consensus       217 DvVi~~~p~  225 (300)
T 2rir_A          217 DICINTIPS  225 (300)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999988763

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.73  E-value=0.00091  Score=57.50  Aligned_cols=72  Identities=19%  Similarity=0.392  Sum_probs=53.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ++++|+++|.|+ |++|++++..|.+.|++|.+.+|+.++.+++.+.++  +.  ..+  +.   .+.+       ...|
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g--~~--~~~--~~---~~~~-------~~aD  188 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP--LE--VVN--SP---EEVI-------DKVQ  188 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC--EE--ECS--CG---GGTG-------GGCS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC--Ce--eeh--hH---Hhhh-------cCCC
Confidence            578899999996 799999999999999999999999887776655432  11  111  21   1112       2579


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|++....
T Consensus       189 iVi~atp~~  197 (275)
T 2hk9_A          189 VIVNTTSVG  197 (275)
T ss_dssp             EEEECSSTT
T ss_pred             EEEEeCCCC
Confidence            999998754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.71  E-value=0.0016  Score=57.61  Aligned_cols=115  Identities=17%  Similarity=0.145  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--e-----EEEEeCCc--hhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--K-----VVIADIQH--QLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~-----Vi~~~r~~--~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ++|.||||+|.+|.+++..|+..|.  +     ++++|++.  +.++-..-++   ..... .  ++.......+.+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~--~~~~~~~~~~~~---   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-K--DVIATDKEEIAF---   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-E--EEEEESCHHHHT---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-C--CEEEcCCcHHHh---
Confidence            5899999999999999999998875  4     89999975  2333333322   11111 1  111111122222   


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc-eEEEEecc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASV  170 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~vss~  170 (297)
                          ...|++|+.||.... ++    .+   -.+.++.|+.....+...+..+-   ..+ .++++|.-
T Consensus        78 ----~daDvVvitAg~prk-pG----~t---R~dll~~N~~i~~~i~~~i~~~~---~~~~~vivvsNP  131 (333)
T 5mdh_A           78 ----KDLDVAILVGSMPRR-DG----ME---RKDLLKANVKIFKCQGAALDKYA---KKSVKVIVVGNP  131 (333)
T ss_dssp             ----TTCSEEEECCSCCCC-TT----CC---TTTTHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             ----CCCCEEEEeCCCCCC-CC----CC---HHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCCc
Confidence                368999999986521 11    12   24567778777776666665542   234 57777653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.71  E-value=0.0039  Score=55.47  Aligned_cols=76  Identities=22%  Similarity=0.320  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCCcHHHHH-HHHH-HHCCCe-EEEEeCCch---hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKAT-AAKF-ISNGAK-VVIADIQHQ---LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~i-a~~l-~~~G~~-Vi~~~r~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++++|+|+|+ |++|... +... ...|++ |++++++++   +.+.. ++++.  ..+  |..+. ++.+ +.++   
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa--~~v--~~~~~-~~~~-i~~~---  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA--TYV--DSRQT-PVED-VPDV---  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC--EEE--ETTTS-CGGG-HHHH---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC--ccc--CCCcc-CHHH-HHHh---
Confidence            44589999999 9999998 7766 568998 999999887   66554 45654  223  55543 2333 3333   


Q ss_pred             cCCccEEEECccC
Q 022418          106 HNQLDIMYNNAGV  118 (297)
Q Consensus       106 ~g~id~li~~ag~  118 (297)
                      .+++|++|.++|.
T Consensus       240 ~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 YEQMDFIYEATGF  252 (357)
T ss_dssp             SCCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999983

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.70  E-value=0.001  Score=56.46  Aligned_cols=70  Identities=13%  Similarity=0.324  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+++    ...  +.   +++.+.++       ..
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~----~~~--~~---~~~~~~~~-------~a  167 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV----KIF--SL---DQLDEVVK-------KA  167 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC----EEE--EG---GGHHHHHH-------TC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----ccC--CH---HHHHhhhc-------CC
Confidence            5678 8999997 8999999999999998 8999999987766544332    211  12   22333332       57


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++||....
T Consensus       168 DiVInatp~  176 (253)
T 3u62_A          168 KSLFNTTSV  176 (253)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999998754

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.70  E-value=0.0083  Score=50.53  Aligned_cols=77  Identities=13%  Similarity=0.128  Sum_probs=57.6

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           36 VALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      +++|.|++|.+|+.+++.+.+. ++.++.+....+.+++... .  ... +..|+|.++...+.++.+.+.  ++++|+.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~--~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~Vig   75 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-G--NTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVG   75 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-T--TCC-EEEECSCTTTHHHHHHHHHHT--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-c--CCc-EEEEccChHHHHHHHHHHHHc--CCCEEEc
Confidence            6899999999999999998875 8887755444444454443 1  223 667999999998888877665  6888887


Q ss_pred             CccC
Q 022418          115 NAGV  118 (297)
Q Consensus       115 ~ag~  118 (297)
                      ..|.
T Consensus        76 TTG~   79 (245)
T 1p9l_A           76 TTGF   79 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7763

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.66  E-value=0.0019  Score=55.68  Aligned_cols=70  Identities=14%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++++|+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+.+    ..+  +   .+++.       + . .
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~----~~~--~---~~~l~-------~-l-~  178 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF----KVI--S---YDELS-------N-L-K  178 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS----EEE--E---HHHHT-------T-C-C
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc----Ccc--c---HHHHH-------h-c-c
Confidence            4688999999998 7999999999999998 8999999998877665533    211  1   12221       1 2 5


Q ss_pred             ccEEEECccC
Q 022418          109 LDIMYNNAGV  118 (297)
Q Consensus       109 id~li~~ag~  118 (297)
                      .|++||....
T Consensus       179 ~DivInaTp~  188 (282)
T 3fbt_A          179 GDVIINCTPK  188 (282)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECCcc
Confidence            7999998854

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.64  E-value=0.035  Score=48.51  Aligned_cols=116  Identities=19%  Similarity=0.245  Sum_probs=73.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ--HQLGQQTAKEL-------GPNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~--~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~   99 (297)
                      |..+.+++.|+|+ |.+|.+++..++..|. +|++.+++  ++..+....++       .........  ++.+      
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~------   74 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA------   74 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG------
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH------
Confidence            5566789999997 9999999999999999 99999999  44443322221       111111111  1111      


Q ss_pred             HHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          100 DFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                           .+...|++|..+|....+     ..+.   .+.++.|+.-.-.+.+.+..+   ...+.++++|.-
T Consensus        75 -----a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           75 -----DTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             -----GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             -----HhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence                 224789999999975311     1333   455677776666666666554   235677777653

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.64  E-value=0.0067  Score=54.76  Aligned_cols=80  Identities=19%  Similarity=0.296  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++|+|+|+ |++|...+......|+ +|+++++++++++.. ++++.  ..  .|.++.+.+.+.+.++.. ..++|+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~--i~~~~~~~~~~~v~~~t~-g~g~Dv  257 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF--EI--ADLSLDTPLHEQIAALLG-EPEVDC  257 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--EE--EETTSSSCHHHHHHHHHS-SSCEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC--cE--EccCCcchHHHHHHHHhC-CCCCCE
Confidence            5789999995 9999999888878999 688999998876655 45654  22  455543323333333221 126999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.++|..
T Consensus       258 vid~~G~~  265 (398)
T 1kol_A          258 AVDAVGFE  265 (398)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCCc
Confidence            99999853

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.59  E-value=0.0022  Score=56.15  Aligned_cols=73  Identities=16%  Similarity=0.209  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+ ++|+|++|++|...+..+...|++|+++++++++.+... +++....+   |..+.+.    ++++  ..+++|+++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi---~~~~~~~----~~~~--~~~~~d~v~  216 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRIL---SRDEFAE----SRPL--EKQLWAGAI  216 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEE---EGGGSSC----CCSS--CCCCEEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEE---ecCCHHH----HHhh--cCCCccEEE
Confidence            45 999999999999999999899999999999988776654 46544322   3222111    1111  124789999


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      .++|
T Consensus       217 d~~g  220 (324)
T 3nx4_A          217 DTVG  220 (324)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            8876

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.58  E-value=0.0037  Score=55.50  Aligned_cols=80  Identities=15%  Similarity=0.134  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|.+|+|+|+ |++|...+......|+ +|+++++++++++. .++++....   .|..+.+-.+++.+..  ...++|
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~lGa~~v---i~~~~~~~~~~v~~~t--~g~g~D  237 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEYGATDI---INYKNGDIVEQILKAT--DGKGVD  237 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHHTCCEE---ECGGGSCHHHHHHHHT--TTCCEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHhCCceE---EcCCCcCHHHHHHHHc--CCCCCC
Confidence            35789999985 9999999988888999 79999998877654 455654322   3444333222222221  112699


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      +++.++|.
T Consensus       238 ~v~d~~g~  245 (352)
T 3fpc_A          238 KVVIAGGD  245 (352)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCC
Confidence            99999884

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.58  E-value=0.0035  Score=57.92  Aligned_cols=74  Identities=12%  Similarity=0.211  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .|.++|.|+ |-+|+.+|+.|.++|+.|++++++++.++.+.+.+  .+..+..|.++++-++++=      -...|.+|
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Ag------i~~ad~~i   73 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAG------AQDADMLV   73 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHT------TTTCSEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcC------CCcCCEEE
Confidence            467888888 89999999999999999999999999998887765  4677889999987765441      12568877


Q ss_pred             ECc
Q 022418          114 NNA  116 (297)
Q Consensus       114 ~~a  116 (297)
                      ...
T Consensus        74 a~t   76 (461)
T 4g65_A           74 AVT   76 (461)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.58  E-value=0.0065  Score=52.57  Aligned_cols=72  Identities=22%  Similarity=0.297  Sum_probs=52.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||+++|.|+ |.||+++++.+...|++|++.+|+.++.+... +.+.  ..+  +   .+++.+++       ...
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~--~~~--~---~~~l~~~l-------~~a  214 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGM--EPF--H---ISKAAQEL-------RDV  214 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTS--EEE--E---GGGHHHHT-------TTC
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCC--eec--C---hhhHHHHh-------cCC
Confidence            4799999999995 89999999999999999999999987655443 3332  222  2   12233333       367


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |+++++..
T Consensus       215 DvVi~~~p  222 (293)
T 3d4o_A          215 DVCINTIP  222 (293)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99998874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.54  E-value=0.019  Score=51.38  Aligned_cols=85  Identities=19%  Similarity=0.249  Sum_probs=58.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecC-----------CCHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV-----------TKESDVSDAV   99 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~-----------s~~~~i~~~~   99 (297)
                      .+.+++|+|+|+ |.+|..+++.+...|++|++.+|+.++++...+ ++.+  ++..|+           ...+....-.
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~--~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQ--WLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCE--ECCCC-------------CHHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCe--EEeccccccccccchhhhhHHHHhhhH
Confidence            468899999999 899999999999999999999999988777655 4432  222221           0011122223


Q ss_pred             HHHHHHcCCccEEEECccCC
Q 022418          100 DFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag~~  119 (297)
                      +.+.+.....|++|..+...
T Consensus       257 ~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          257 QALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHhcCCEEEECCCCC
Confidence            33333445789999887543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.54  E-value=0.049  Score=47.79  Aligned_cols=114  Identities=15%  Similarity=0.143  Sum_probs=73.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhC-------CCeeEEEecCCCHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELG-------PNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~-------~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      -+.+++.|+|+ |.+|.+++..|+..|.  .|+++|++.++++....++.       ..+.....|   .+         
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~---------   69 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE---------   69 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH---------
Confidence            34578999996 9999999999999987  89999999887665433331       223332222   11         


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                        .....|++|..+|....+     ..+.   .+.++.|+.-.-.+.+.+..+   ...+.++++|.-.
T Consensus        70 --a~~~aDvVvi~ag~p~kp-----G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPv  125 (326)
T 3pqe_A           70 --DCKDADIVCICAGANQKP-----GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPV  125 (326)
T ss_dssp             --GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             --HhCCCCEEEEecccCCCC-----CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChH
Confidence              123679999999965211     1232   345777776666666666553   2356777776543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.50  E-value=0.0091  Score=52.74  Aligned_cols=79  Identities=14%  Similarity=0.244  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|.+++|+|+ |++|...+...... |.+|+++++++++.+.. ++++....   .|..+ +..++ +.+... ..++|
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~~---i~~~~-~~~~~-v~~~t~-g~g~d  241 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADAA---VKSGA-GAADA-IRELTG-GQGAT  241 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSEE---EECST-THHHH-HHHHHG-GGCEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEE---EcCCC-cHHHH-HHHHhC-CCCCe
Confidence            35789999998 99999888777666 78999999998877654 45654432   23332 22222 222221 12799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      +++.++|.
T Consensus       242 ~v~d~~G~  249 (345)
T 3jv7_A          242 AVFDFVGA  249 (345)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.48  E-value=0.0084  Score=53.55  Aligned_cols=78  Identities=15%  Similarity=0.214  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++|+|+|+ |++|...+......|+ +|+++++++++.+.. ++++....   .|..+.+-.++ +.+..  .+++|+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~~~~~~-~~~~~--~gg~D~  261 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATHV---INSKTQDPVAA-IKEIT--DGGVNF  261 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSEE---EETTTSCHHHH-HHHHT--TSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCEE---ecCCccCHHHH-HHHhc--CCCCcE
Confidence            5789999995 9999999988888899 699999988876655 45554322   24443322222 22221  237999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       262 vid~~g~  268 (371)
T 1f8f_A          262 ALESTGS  268 (371)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.47  E-value=0.0058  Score=55.24  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|++|+|+|+ |++|...+......|+ +|+++++++++++.. ++++.  ..  .|..+.+-+.+.+.++.. ..++|
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~--i~~~~~~~~~~~~~~~~~-g~g~D  256 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAGF--ET--IDLRNSAPLRDQIDQILG-KPEVD  256 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTTC--EE--EETTSSSCHHHHHHHHHS-SSCEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC--cE--EcCCCcchHHHHHHHHhC-CCCCC
Confidence            35789999996 9999999888878899 899999998877654 45554  32  355543221222222211 12699


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      ++|.++|..
T Consensus       257 vvid~~g~~  265 (398)
T 2dph_A          257 CGVDAVGFE  265 (398)
T ss_dssp             EEEECSCTT
T ss_pred             EEEECCCCc
Confidence            999999853

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.47  E-value=0.0084  Score=50.71  Aligned_cols=79  Identities=27%  Similarity=0.420  Sum_probs=52.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHh---CCC--eeE
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH-------------------QLGQQTAKEL---GPN--ATF   84 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~~---~~~--v~~   84 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+..++.+   .+.  +..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3688999999998 7899999999999998 577776542                   3344444333   333  444


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCccEEEECcc
Q 022418           85 IACDVTKESDVSDAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        85 ~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag  117 (297)
                      +..+++ .+.+.++++       ..|+||.+..
T Consensus       103 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            444454 345555444       3689987653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.44  E-value=0.0085  Score=53.95  Aligned_cols=48  Identities=23%  Similarity=0.259  Sum_probs=41.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      ++.+++++|+|+ |.+|..+++.+...|++|++++++.++.+...+ ++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga  216 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGG  216 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC
Confidence            678999999996 899999999999999999999999887776544 543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.36  E-value=0.063  Score=47.08  Aligned_cols=115  Identities=19%  Similarity=0.244  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.|+++++++....++       .........  +|.+          
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----------
Confidence            45678999998 9999999999999998 9999999988765332222       112222111  1221          


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                       .+...|++|..+|.... ++    .+   -.+.+..|+.-.-.+.+.+..+-   ..+.++++|.-.
T Consensus        72 -a~~~aDiVIiaag~p~k-~G----~~---R~dl~~~N~~i~~~i~~~i~~~~---p~a~iivvtNPv  127 (324)
T 3gvi_A           72 -AIEGADVVIVTAGVPRK-PG----MS---RDDLLGINLKVMEQVGAGIKKYA---PEAFVICITNPL  127 (324)
T ss_dssp             -GGTTCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             -HHCCCCEEEEccCcCCC-CC----CC---HHHHHHhhHHHHHHHHHHHHHHC---CCeEEEecCCCc
Confidence             12367999999986521 11    11   23456666665555555555542   356777777543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.29  E-value=0.0072  Score=53.96  Aligned_cols=48  Identities=27%  Similarity=0.405  Sum_probs=43.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      +++||+++|.|. |.+|..+++.|.+.|++|++.+++.+.+++..++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            699999999997 889999999999999999999999888887777654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.22  E-value=0.48  Score=40.29  Aligned_cols=165  Identities=12%  Similarity=0.076  Sum_probs=95.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHC-CCeEEE-EeCCch---------------------hHHHHHHHhCCCeeEEEecCC
Q 022418           34 EKVALITGAASGIGKATAAKFISN-GAKVVI-ADIQHQ---------------------LGQQTAKELGPNATFIACDVT   90 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~-~~r~~~---------------------~~~~~~~~~~~~v~~~~~D~s   90 (297)
                      ..+|.|.|++|.+|+.+++.+.+. +..++. ++|+.+                     .+++..+.  .+   +..|+|
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--~D---VVIDfT   81 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--AD---YLIDFT   81 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--CS---EEEECS
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--CC---EEEEcC
Confidence            368999999999999999999875 556655 566532                     23333332  22   356999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHH-------Hh----hhHHHHHHHHHHHhccCC
Q 022418           91 KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMR-------IN----VRGVVAGIKHSTRVMIPR  159 (297)
Q Consensus        91 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~-------~n----~~~~~~l~~~~~~~l~~~  159 (297)
                      .++...+.++.+.+.  ++++++-+.|..        +...+.+++.-+       .|    +.-.+.+.+.+.++|.. 
T Consensus        82 ~p~a~~~~~~~al~~--G~~vVigTTG~s--------~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~~-  150 (272)
T 4f3y_A           82 LPEGTLVHLDAALRH--DVKLVIGTTGFS--------EPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFAQ-  150 (272)
T ss_dssp             CHHHHHHHHHHHHHH--TCEEEECCCCCC--------HHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTSS-
T ss_pred             CHHHHHHHHHHHHHc--CCCEEEECCCCC--------HHHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcCc-
Confidence            999998888888776  678888777642        111122222111       12    22333445555555531 


Q ss_pred             CCceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHH---------------ccCCcEEEEEeCCCccCc
Q 022418          160 RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL---------------CEYGIRINCISPFAIPTP  218 (297)
Q Consensus       160 ~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el---------------~~~~i~v~~v~pG~v~t~  218 (297)
                        +.=|-|  ...+...+.-.+-+.+....+.+.+.+..++               .+.+|.+.+++-|-+-++
T Consensus       151 --~~diei--~E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~  220 (272)
T 4f3y_A          151 --GYDIEI--IEAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGD  220 (272)
T ss_dssp             --SCEEEE--EEEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             --CCCEEE--EEecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccCCCCCCccCEEEEECCCCceE
Confidence              112222  2333333433445666666666655443222               123688999998876654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.21  E-value=0.019  Score=51.84  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=41.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      .+.+.+|+|+|+ |.+|..+++.+...|++|++.+++.++++...+ ++.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~  234 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGA  234 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC
Confidence            468899999999 899999999999999999999999988777654 443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.16  E-value=0.0074  Score=51.72  Aligned_cols=40  Identities=33%  Similarity=0.506  Sum_probs=36.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+++||+++|.|.++-+|+.++..|..+|++|+++.|+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            5799999999999999999999999999999999887643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.15  E-value=0.05  Score=47.74  Aligned_cols=115  Identities=17%  Similarity=0.233  Sum_probs=64.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhC------CCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELG------PNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~------~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ++-+++++.|+|+ |.+|.+++..|+..|.  +++++|++.++++....++.      ..+.... |  +.+        
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~~--------   72 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EYS--------   72 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG--------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cHH--------
Confidence            4556789999996 9999999999999887  79999999887765544441      1222221 1  221        


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                         .....|++|..||.... ++       ++-.+.++.|+.-...+.+.+.++   ...+.++++|.-
T Consensus        73 ---a~~~aDiVvi~ag~~~k-pG-------~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtNP  127 (326)
T 3vku_A           73 ---DAKDADLVVITAGAPQK-PG-------ETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANP  127 (326)
T ss_dssp             ---GGTTCSEEEECCCCC------------------------CHHHHHHHHHTT---TCCSEEEECSSS
T ss_pred             ---HhcCCCEEEECCCCCCC-CC-------chHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccCc
Confidence               12378999999996521 11       122345666665444455554432   235667777653

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.13  E-value=0.0078  Score=53.02  Aligned_cols=71  Identities=17%  Similarity=0.180  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+   ..+.++..|.++++.++++      ...+.|.+|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a------~i~~a~~vi  182 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKA------NVRGARAVI  182 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHT------CSTTEEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhc------ChhhccEEE
Confidence            457999997 8999999999999999 999999998877 443   3578899999999877654      113678888


Q ss_pred             ECc
Q 022418          114 NNA  116 (297)
Q Consensus       114 ~~a  116 (297)
                      ...
T Consensus       183 ~~~  185 (336)
T 1lnq_A          183 VDL  185 (336)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.11  E-value=0.0061  Score=54.18  Aligned_cols=80  Identities=15%  Similarity=0.143  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL---GQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .|.+|+|+||+|++|...+......|++++++.++.+.   ..+..++++.... +  |..+. ...+ +.++....+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~-~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-I--TEEEL-RRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-E--EHHHH-HSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-E--ecCcc-hHHH-HHHHHhCCCCc
Confidence            57899999999999999988877889998887765432   2344556664322 2  21111 0111 11111111258


Q ss_pred             cEEEECcc
Q 022418          110 DIMYNNAG  117 (297)
Q Consensus       110 d~li~~ag  117 (297)
                      |++|.++|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999887

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.10  E-value=0.098  Score=45.97  Aligned_cols=116  Identities=11%  Similarity=0.119  Sum_probs=74.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhC------CCeeEEEecCCCHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELG------PNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~------~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      ....+++.|+|+ |.+|.+++..|+.+|.  .|+++|++.++++....++.      ........  .|.+.        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~--------   84 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV--------   84 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence            456789999997 9999999999999987  79999999877766544441      11112211  23221        


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                         ....|++|..||.... ++    .+.   .+.++.|+.-...+.+.+.++   ...+.++++|.-.
T Consensus        85 ---~~~aDiVvi~aG~~~k-pG----~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv  139 (331)
T 4aj2_A           85 ---TANSKLVIITAGARQQ-EG----ESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV  139 (331)
T ss_dssp             ---GTTEEEEEECCSCCCC-TT----CCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             ---hCCCCEEEEccCCCCC-CC----ccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence               2368999999997532 11    222   346667766555666666554   2456777777543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.08  E-value=0.0072  Score=52.67  Aligned_cols=69  Identities=12%  Similarity=0.163  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+++|+|+ |++|...+......|++|++++ ++++.+.. ++++... .+  |  |.+++          .+++|+
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa~~-v~--~--d~~~v----------~~g~Dv  202 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGVRH-LY--R--EPSQV----------TQKYFA  202 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTEEE-EE--S--SGGGC----------CSCEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCCCE-EE--c--CHHHh----------CCCccE
Confidence            36889999999 9999999988888999999999 77766554 4465422 22  3  22111          358999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      ++.++|.
T Consensus       203 v~d~~g~  209 (315)
T 3goh_A          203 IFDAVNS  209 (315)
T ss_dssp             EECC---
T ss_pred             EEECCCc
Confidence            9998874

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.03  E-value=0.12  Score=45.21  Aligned_cols=113  Identities=20%  Similarity=0.264  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhC-------CCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELG-------PNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~-------~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +.+++.|+|+ |.+|.+++..|+..|. +|++.|+++++++....++.       ........  ++.+.          
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a----------   70 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD----------   70 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH----------
Confidence            3468899995 9999999999999988 89999999987664443331       12222211  12211          


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                       +...|++|..+|.... +    ..+.   .+.+..|+.-.-.+.+.+..+-   ..+.++++|.-
T Consensus        71 -~~~aDvVIi~ag~p~k-~----G~~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtNP  124 (321)
T 3p7m_A           71 -LENSDVVIVTAGVPRK-P----GMSR---DDLLGINIKVMQTVGEGIKHNC---PNAFVICITNP  124 (321)
T ss_dssp             -GTTCSEEEECCSCCCC-T----TCCH---HHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSS
T ss_pred             -HCCCCEEEEcCCcCCC-C----CCCH---HHHHHHhHHHHHHHHHHHHHHC---CCcEEEEecCc
Confidence             2367999999986531 1    1233   3456667666666666665542   35677777653

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.94  E-value=0.047  Score=46.77  Aligned_cols=82  Identities=12%  Similarity=0.127  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHhCC-----------CeeEEEecCCCHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA---KVVIADIQHQLGQQTAKELGP-----------NATFIACDVTKESDVSDAV   99 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~-----------~v~~~~~D~s~~~~i~~~~   99 (297)
                      .+++.|.|+ |-+|.+++..|++.|+   +|++.+|+.++.++..+.++.           ....+..=+ .++.+.+++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~vl   80 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKMVC   80 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHHHH
Confidence            467888888 9999999999999998   899999999988887765321           112222222 456677777


Q ss_pred             HHHHHH-cCCccEEEECcc
Q 022418          100 DFTISK-HNQLDIMYNNAG  117 (297)
Q Consensus       100 ~~~~~~-~g~id~li~~ag  117 (297)
                      +++... ..+=.++|++++
T Consensus        81 ~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           81 EELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHTTTCEEEECCT
T ss_pred             HHHHhhccCCCeEEEEecC
Confidence            777654 322226776655

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.92  E-value=0.002  Score=57.31  Aligned_cols=46  Identities=24%  Similarity=0.367  Sum_probs=38.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      +++||++.|.|. |.||+.+++.+.+.|++|++.+++.+. .+..++.
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~  217 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL  217 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc
Confidence            699999999975 999999999999999999988887654 3344443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.91  E-value=0.019  Score=50.85  Aligned_cols=118  Identities=13%  Similarity=0.121  Sum_probs=66.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHH---HHhCCC--eeEEEecCCCHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-------KVVIADIQHQ--LGQQTA---KELGPN--ATFIACDVTKESDV   95 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~--~~~~~~---~~~~~~--v~~~~~D~s~~~~i   95 (297)
                      .+++.-+|.|+||+|+||..++..|++...       .+.+.|.++.  .++-..   .+....  ......  ++.   
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---
Confidence            345566999999999999999999988542       6888898764  223222   222111  112221  122   


Q ss_pred             HHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418           96 SDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      .+.       +...|++|..||...++     ..+.   .+.++.|..-.-.+.+.+.++-  .+...++.+|.
T Consensus        95 ~~a-------~~~advVvi~aG~prkp-----GmtR---~DLl~~Na~I~~~~~~~i~~~a--~~~~~vlvvsN  151 (345)
T 4h7p_A           95 RVA-------FDGVAIAIMCGAFPRKA-----GMER---KDLLEMNARIFKEQGEAIAAVA--ASDCRVVVVGN  151 (345)
T ss_dssp             HHH-------TTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSS
T ss_pred             HHH-------hCCCCEEEECCCCCCCC-----CCCH---HHHHHHhHHHHHHHHHHHHhhc--cCceEEEEeCC
Confidence            112       23789999999976321     2444   4456777664444444443321  23345555554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.89  E-value=0.0079  Score=52.74  Aligned_cols=74  Identities=19%  Similarity=0.260  Sum_probs=50.6

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      +++|+|++|++|...+..+...|++|+++++++++.+.. ++++....   .|..+.+  .+.++++  ..+++|++|.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v---~~~~~~~--~~~~~~~--~~~~~d~vid~  224 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEV---ISREDVY--DGTLKAL--SKQQWQGAVDP  224 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEE---EEHHHHC--SSCCCSS--CCCCEEEEEES
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEE---EECCCch--HHHHHHh--hcCCccEEEEC
Confidence            799999999999999999888999999999998876655 44554322   2322110  0111111  11368999999


Q ss_pred             cc
Q 022418          116 AG  117 (297)
Q Consensus       116 ag  117 (297)
                      +|
T Consensus       225 ~g  226 (330)
T 1tt7_A          225 VG  226 (330)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.85  E-value=0.026  Score=49.09  Aligned_cols=86  Identities=10%  Similarity=0.040  Sum_probs=56.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----C------CCeeEEEecCCCHHHHHHHH-
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----G------PNATFIACDVTKESDVSDAV-   99 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~------~~v~~~~~D~s~~~~i~~~~-   99 (297)
                      ..+.+++.|.|. |.+|..++..|++.|++|++.+|+.++.+.+.+.-    .      ....++..=+.++..+++++ 
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~   96 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF   96 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence            444578888875 89999999999999999999999998877765421    0      01233444455566666666 


Q ss_pred             --HHHHHHcCCccEEEECcc
Q 022418          100 --DFTISKHNQLDIMYNNAG  117 (297)
Q Consensus       100 --~~~~~~~g~id~li~~ag  117 (297)
                        +.+.....+-.++|+...
T Consensus        97 ~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           97 DKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             STTCGGGGCCTTCEEEECSC
T ss_pred             CchhhhhccCCCCEEEECCC
Confidence              444333323345555543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.83  E-value=0.027  Score=49.57  Aligned_cols=79  Identities=23%  Similarity=0.222  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|.+++|+|+ |++|...+..+++. |++|+++++++++++. .++++....   .|.++.+-.+++.+..  ....+|
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~-~~~~Ga~~~---i~~~~~~~~~~v~~~t--~g~g~d  234 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL-AKKIGADVT---INSGDVNPVDEIKKIT--GGLGVQ  234 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH-HHHTTCSEE---EEC-CCCHHHHHHHHT--TSSCEE
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh-hhhcCCeEE---EeCCCCCHHHHhhhhc--CCCCce
Confidence            45789999987 77777777776655 7899999999887654 444554432   3555544443333322  112578


Q ss_pred             EEEECcc
Q 022418          111 IMYNNAG  117 (297)
Q Consensus       111 ~li~~ag  117 (297)
                      .++.++|
T Consensus       235 ~~~~~~~  241 (348)
T 4eez_A          235 SAIVCAV  241 (348)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            8888776

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.83  E-value=0.017  Score=49.22  Aligned_cols=37  Identities=11%  Similarity=0.237  Sum_probs=34.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      ++||+++|.|.++-+|+.++..|.++|++|+++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            9999999999999999999999999999999988753

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.81  E-value=0.2  Score=43.18  Aligned_cols=111  Identities=18%  Similarity=0.160  Sum_probs=67.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.|+|+ |.+|.+++..|+..|.  +|.+.++++++++...-++       .........  +|.+.+          
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~----------   67 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL----------   67 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh----------
Confidence            46889999 9999999999999998  8999999998765222111       111222211  122222          


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                       ...|++|..+|....+     ..+.   .+.+..|+.-.-.+.+.+.++   ...+.++++|.-
T Consensus        68 -~~aDiVViaag~~~kp-----G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvsNP  120 (294)
T 1oju_A           68 -KGSEIIVVTAGLARKP-----GMTR---LDLAHKNAGIIKDIAKKIVEN---APESKILVVTNP  120 (294)
T ss_dssp             -TTCSEEEECCCCCCCS-----SCCH---HHHHHHHHHHHHHHHHHHHTT---STTCEEEECSSS
T ss_pred             -CCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCc
Confidence             2679999999965211     1333   334666655444444444332   235677777653

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.80  E-value=0.034  Score=52.62  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=33.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. +++++|++.
T Consensus       322 ekL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          322 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            3789999999999 8999999999999998 588887754

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.79  E-value=0.11  Score=45.31  Aligned_cols=111  Identities=18%  Similarity=0.238  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.|+|+ |.+|.+++..|+..|.  .|+++|+++++++....++       ...+.....|  +.+           .
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------P   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------H
Confidence            46889997 9999999999999887  8999999998765433222       1222222122  221           1


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                      +...|++|..+|.... ++    .+   -.+.++.|+.-.-.+.+.+..+   ...+.++++|.-
T Consensus        67 ~~~aDvVii~ag~~~k-pG----~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNP  120 (314)
T 3nep_X           67 TEDSDVCIITAGLPRS-PG----MS---RDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVANP  120 (314)
T ss_dssp             GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCSS
T ss_pred             hCCCCEEEECCCCCCC-CC----CC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCCc
Confidence            2368999999996521 11    11   2455666666555555554432   235677777653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.76  E-value=0.055  Score=45.72  Aligned_cols=87  Identities=15%  Similarity=0.260  Sum_probs=59.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCC-----------CeeEEEecCCCHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGP-----------NATFIACDVTKESDVSDA   98 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~-----------~v~~~~~D~s~~~~i~~~   98 (297)
                      ++.++++.|.|+ |.+|..++..|++.|++ |.+.+|+.+..+...+..+.           ....+..= ..+..+.++
T Consensus         7 ~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v   84 (266)
T 3d1l_A            7 SIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAEL   84 (266)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHH
T ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHH
Confidence            345578999997 99999999999999998 88999999888777665321           12222222 234466777


Q ss_pred             HHHHHHHcCCccEEEECccCC
Q 022418           99 VDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~  119 (297)
                      ++++.....+=.++|++.+..
T Consensus        85 ~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           85 LQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHhhcCCCcEEEECCCCC
Confidence            777654332334677776644

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.75  E-value=0.017  Score=49.46  Aligned_cols=40  Identities=20%  Similarity=0.321  Sum_probs=36.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+++||+++|.|.++-+|+.++..|..+|++|+++.+...
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~  196 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR  196 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence            5799999999999999999999999999999999887543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.75  E-value=0.044  Score=48.25  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=33.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.
T Consensus        30 ~kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           30 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            4789999999998 8999999999999997 578877643

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.74  E-value=0.12  Score=44.60  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=34.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ   73 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~   73 (297)
                      -+++.|.|+ |.+|.+++..|++.|++|++.+|+++.++.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            367999998 999999999999999999999999887664

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.72  E-value=0.077  Score=46.37  Aligned_cols=114  Identities=17%  Similarity=0.168  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeE-EEecC--CCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATF-IACDV--TKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~-~~~D~--s~~~~i~~~~~~~~~~~g  107 (297)
                      +.+++.|+|+ |.+|..++..|+..|.  +|+++|.+.++++....++.....+ ..+.+  ++.+           .+.
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~-----------a~~   73 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS-----------DVK   73 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG-----------GGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHH-----------HhC
Confidence            3467899998 9999999999999987  8999999987766544444222100 01111  1211           124


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      ..|++|..+|....+     ..+.   .+.+..|+.-...+.+.+.++   ...+.++++|.
T Consensus        74 ~aDvVii~~g~p~k~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           74 DCDVIVVTAGANRKP-----GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             TCSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCCEEEEcCCCCCCC-----CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence            789999999865211     1222   345677777666666666665   24566666544

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.71  E-value=0.029  Score=49.40  Aligned_cols=80  Identities=26%  Similarity=0.292  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeE-EEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKV-VIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V-i~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..|++++|+|+ |++|...+..+...|+.+ +++++++++++ ..++++....+   |.++.+ ..+..+.+. .....|
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~-~a~~lGa~~~i---~~~~~~-~~~~~~~~~-~~~g~d  231 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA-LAKSFGAMQTF---NSSEMS-APQMQSVLR-ELRFNQ  231 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEE---ETTTSC-HHHHHHHHG-GGCSSE
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH-HHHHcCCeEEE---eCCCCC-HHHHHHhhc-ccCCcc
Confidence            46889999987 899999998888899875 66777777654 44566654322   444322 223333332 234689


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      +++.++|.
T Consensus       232 ~v~d~~G~  239 (346)
T 4a2c_A          232 LILETAGV  239 (346)
T ss_dssp             EEEECSCS
T ss_pred             cccccccc
Confidence            99988873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.69  E-value=0.062  Score=46.01  Aligned_cols=42  Identities=17%  Similarity=0.213  Sum_probs=37.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      +++.|.|++|.+|.+++..|++.|++|++.+|+.+..+...+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            589999999999999999999999999999999887776544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.68  E-value=0.04  Score=50.14  Aligned_cols=75  Identities=12%  Similarity=0.114  Sum_probs=55.8

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..++-+.+|+++|.|+ |-+|+.+++.+.+.|++|++++.+.+....   ...+  ..+..|..|.+.+.++++      
T Consensus        28 ~~~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~ad--~~~~~~~~d~~~l~~~a~------   95 (419)
T 4e4t_A           28 SVSPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVAD--RHLRAAYDDEAALAELAG------   95 (419)
T ss_dssp             -CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHSS--EEECCCTTCHHHHHHHHH------
T ss_pred             ccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hhCC--EEEECCcCCHHHHHHHHh------
Confidence            3445678999999987 679999999999999999999876543221   1222  345689999998888774      


Q ss_pred             CCccEEEE
Q 022418          107 NQLDIMYN  114 (297)
Q Consensus       107 g~id~li~  114 (297)
                       ++|+++.
T Consensus        96 -~~D~V~~  102 (419)
T 4e4t_A           96 -LCEAVST  102 (419)
T ss_dssp             -HCSEEEE
T ss_pred             -cCCEEEE
Confidence             5788883

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.68  E-value=0.17  Score=44.12  Aligned_cols=112  Identities=15%  Similarity=0.212  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      .+.+++.|+|+ |.+|..++..|+.+|.  .|+++|.++++++....++       +..+... .|  +.++        
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a--------   71 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD--------   71 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH--------
Confidence            34578999999 9999999999999884  7999999887665433222       1222222 22  2222        


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                         +...|++|..+|....+     ..+.   .+.+..|..-...+.+.+.++   ...+.++++|.
T Consensus        72 ---~~~aDvVvi~ag~~~~~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (317)
T 3d0o_A           72 ---CHDADLVVICAGAAQKP-----GETR---LDLVSKNLKIFKSIVGEVMAS---KFDGIFLVATN  124 (317)
T ss_dssp             ---GTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             ---hCCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence               23689999999875311     1232   234566665555555555543   23566766654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.68  E-value=0.021  Score=49.32  Aligned_cols=39  Identities=23%  Similarity=0.318  Sum_probs=35.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      .+++||.++|.|.++-+|+.++..|.++|++|+++.|..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            479999999999999999999999999999999998743

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.65  E-value=0.017  Score=49.49  Aligned_cols=39  Identities=23%  Similarity=0.284  Sum_probs=35.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      .+++||+++|.|.++-+|+.++..|..+|++|+++.|+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            479999999999999999999999999999999887653

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.64  E-value=0.0042  Score=56.38  Aligned_cols=48  Identities=19%  Similarity=0.163  Sum_probs=39.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEE-EEeC----------CchhHHHHHHHh
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVV-IADI----------QHQLGQQTAKEL   78 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi-~~~r----------~~~~~~~~~~~~   78 (297)
                      .+++||+++|+| .|.+|...++.|.+.|++|+ +.|+          +.+.+.+.+++.
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~  272 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEAT  272 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhh
Confidence            379999999998 69999999999999999988 6777          555566665553

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.62  E-value=0.11  Score=44.93  Aligned_cols=110  Identities=15%  Similarity=0.170  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCC------CeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGP------NATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~------~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++.|+|+ |.+|..++..|+..|.  +|++.++++++++....++..      ..... .  ++.+.           .
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~a-----------~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHSE-----------L   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHHH-----------h
Confidence            46889998 9999999999999998  899999998776654444421      11111 1  12211           2


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASV  170 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~  170 (297)
                      ...|++|..+|....+.     .   .-.+.+..|..-.-.+.+.+.++   ...+.++++|..
T Consensus        66 ~~aDvVIi~~~~~~~~g-----~---~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP  118 (304)
T 2v6b_A           66 ADAQVVILTAGANQKPG-----E---SRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNP  118 (304)
T ss_dssp             TTCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred             CCCCEEEEcCCCCCCCC-----C---cHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            36899999998652111     1   12234556666555566666554   134556665543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.58  E-value=0.064  Score=46.82  Aligned_cols=86  Identities=10%  Similarity=0.067  Sum_probs=58.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      +...+++.|.|. |.+|..++..|++.|++|++.+|+.++.+++.+.-          -....++..=+.++..++.++.
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence            345678888876 99999999999999999999999998877654320          0123344445556667777765


Q ss_pred             --HHHHHcCCccEEEECcc
Q 022418          101 --FTISKHNQLDIMYNNAG  117 (297)
Q Consensus       101 --~~~~~~g~id~li~~ag  117 (297)
                        .+.....+-.++|+...
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              45444444456666554

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.55  E-value=0.12  Score=45.10  Aligned_cols=112  Identities=21%  Similarity=0.280  Sum_probs=68.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-C--CeEEEEeCCchhHHHHHHHh-CC--CeeEEEe-cCCCHHHHHHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFISN-G--AKVVIADIQHQLGQQTAKEL-GP--NATFIAC-DVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G--~~Vi~~~r~~~~~~~~~~~~-~~--~v~~~~~-D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++|.|+||+|.+|.+++..|++. +  ..++++|.++ +.+-..-++ +.  ....... .-.+.+.+           .
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-----------~   68 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------E   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHH-----------T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHh-----------C
Confidence            46899999999999999999875 4  4799999987 333222222 11  1111111 10122222           2


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      ..|++|..||.... +    ..+.   .+.++.|..-.-.+.+.+.++   ...+.++++|.
T Consensus        69 ~aDivii~ag~~rk-p----G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  119 (312)
T 3hhp_A           69 GADVVLISAGVARK-P----GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (312)
T ss_dssp             TCSEEEECCSCSCC-T----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CCCEEEEeCCCCCC-C----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence            78999999996521 1    1333   556777777666666666654   23567777765

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.50  E-value=0.06  Score=46.10  Aligned_cols=82  Identities=10%  Similarity=0.025  Sum_probs=56.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHH---HH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAV---DF  101 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~---~~  101 (297)
                      +++.|.|. |.+|..++..|++.|++|++.+|+.++.+...+.-          -.....+..=+.++..+++++   +.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            57888886 99999999999999999999999998877665421          011233444455566777777   65


Q ss_pred             HHHHcCCccEEEECcc
Q 022418          102 TISKHNQLDIMYNNAG  117 (297)
Q Consensus       102 ~~~~~g~id~li~~ag  117 (297)
                      +.....+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            5554433346666644

>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3

Probab=95.50  E-value=0.55  Score=38.70  Aligned_cols=78  Identities=15%  Similarity=0.291  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEE-EeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -+.+..+|+|++|.+|+.+++...+.|..++. +++..+      ..+. ... +..|+|.|+.+.+.++.+.+.  ++.
T Consensus        10 ~~~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~------~~l~-~~D-VvIDFT~P~a~~~~~~~~~~~--g~~   79 (228)
T 1vm6_A           10 HHHMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELD-SPD-VVIDFSSPEALPKTVDLCKKY--RAG   79 (228)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECS-CCS-EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             hccceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc------cccc-CCC-EEEECCCHHHHHHHHHHHHHc--CCC
Confidence            35678999999999999998877677888544 555432      1111 222 667999999999999888776  677


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      .||-..|+.
T Consensus        80 ~ViGTTG~~   88 (228)
T 1vm6_A           80 LVLGTTALK   88 (228)
T ss_dssp             EEECCCSCC
T ss_pred             EEEeCCCCC
Confidence            888777643

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.47  E-value=0.026  Score=48.34  Aligned_cols=40  Identities=13%  Similarity=0.207  Sum_probs=36.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+++||+++|.|++.-+|+.++..|...|++|.++.+...
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  194 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK  194 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            4799999999999999999999999999999999876654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.45  E-value=0.069  Score=46.04  Aligned_cols=81  Identities=15%  Similarity=0.119  Sum_probs=59.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++.|.|. |.+|..++..|++.|++|++.+|++++.+...+.-          -. ..++..-+.++..++++++.+..
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            56777874 89999999999999999999999998877665421          12 45555566677788888877765


Q ss_pred             HcCCccEEEECcc
Q 022418          105 KHNQLDIMYNNAG  117 (297)
Q Consensus       105 ~~g~id~li~~ag  117 (297)
                      ...+-.++|+...
T Consensus        94 ~l~~g~ivv~~st  106 (296)
T 3qha_A           94 HAKPGTVIAIHST  106 (296)
T ss_dssp             TCCTTCEEEECSC
T ss_pred             hcCCCCEEEEeCC
Confidence            4444456666654

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.44  E-value=0.055  Score=48.38  Aligned_cols=71  Identities=20%  Similarity=0.187  Sum_probs=53.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.+...   ....  -..+..|..|.+.+.++.+.       +
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~a--d~~~~~~~~d~~~l~~~~~~-------~   74 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYVA--HEFIQAKYDDEKALNQLGQK-------C   74 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGGS--SEEEECCTTCHHHHHHHHHH-------C
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhhC--CEEEECCCCCHHHHHHHHHh-------C
Confidence            3467899999997 78999999999999999999988654211   1111  23567899999888887763       5


Q ss_pred             cEEE
Q 022418          110 DIMY  113 (297)
Q Consensus       110 d~li  113 (297)
                      |+++
T Consensus        75 dvi~   78 (377)
T 3orq_A           75 DVIT   78 (377)
T ss_dssp             SEEE
T ss_pred             Ccce
Confidence            7764

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.42  E-value=0.14  Score=44.42  Aligned_cols=71  Identities=23%  Similarity=0.272  Sum_probs=49.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCC-------CeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGP-------NATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~-------~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++.|+|+ |.+|..++..|+..|. +|++.|+++++++....++..       .......  +|.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            57999999 9999999999999996 899999998877654433311       1111110  22211           2


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                      ...|++|..+|..
T Consensus        69 ~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           69 ANSDVIVVTSGAP   81 (309)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEEcCCCC
Confidence            3679999999875

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.40  E-value=0.024  Score=48.12  Aligned_cols=70  Identities=26%  Similarity=0.303  Sum_probs=54.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++| +++|.|+ |++|++++..|.+.|++|.+++|+.++.+++.++.+..     .  .+.+   ++        ...
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-----~--~~~~---~~--------~~~  172 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-----A--VPLE---KA--------REA  172 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-----E--CCGG---GG--------GGC
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-----h--hhHh---hc--------cCC
Confidence            36888 9999997 88999999999999999999999998888877766532     1  1221   11        157


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++....
T Consensus       173 Divi~~tp~~  182 (263)
T 2d5c_A          173 RLLVNATRVG  182 (263)
T ss_dssp             SEEEECSSTT
T ss_pred             CEEEEccCCC
Confidence            9999998754

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.40  E-value=0.053  Score=47.15  Aligned_cols=71  Identities=21%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ..++.||++.|.|. |.||+++++.+...|++|++.+|+.+. + ...+.+.  ..     .+   ++++++       .
T Consensus       137 ~~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~--~~-----~~---l~ell~-------~  196 (307)
T 1wwk_A          137 GIELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNG--KF-----VD---LETLLK-------E  196 (307)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTC--EE-----CC---HHHHHH-------H
T ss_pred             CcccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCc--cc-----cC---HHHHHh-------h
Confidence            35899999999986 999999999999999999999998875 2 2333332  11     12   334444       3


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|+++.+....
T Consensus       197 aDvV~l~~p~~  207 (307)
T 1wwk_A          197 SDVVTIHVPLV  207 (307)
T ss_dssp             CSEEEECCCCS
T ss_pred             CCEEEEecCCC
Confidence            59998887543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.37  E-value=0.013  Score=57.94  Aligned_cols=79  Identities=18%  Similarity=0.132  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+|||.||+|++|.+.+......|++|++++++. +.+.. + ++... .  .|..+.+-.+++.+..  ...++|+
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~-v--~~~~~~~~~~~i~~~t--~g~GvDv  415 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREH-L--ASSRTCDFEQQFLGAT--GGRGVDV  415 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGG-E--ECSSSSTHHHHHHHHS--CSSCCSE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhh-e--eecCChhHHHHHHHHc--CCCCeEE
Confidence            4688999999999999999988888999999998765 32211 1 33221 1  2444433222222211  1126999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      ++++.|.
T Consensus       416 Vld~~gg  422 (795)
T 3slk_A          416 VLNSLAG  422 (795)
T ss_dssp             EEECCCT
T ss_pred             EEECCCc
Confidence            9998764

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.33  E-value=0.11  Score=42.37  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=49.8

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +.-++..+++.|.| .|.+|.+++..|++.|++|++.+|+++       .. ..++.++  -+- ...+.++++++....
T Consensus        13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~--av~-~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIM--AVP-YPALAALAKQYATQL   81 (209)
T ss_dssp             -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEE--CSC-HHHHHHHHHHTHHHH
T ss_pred             cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEE--cCC-cHHHHHHHHHHHHhc
Confidence            33457788999999 699999999999999999999999876       11 2233333  332 667777777765544


Q ss_pred             CCccEEEECcc
Q 022418          107 NQLDIMYNNAG  117 (297)
Q Consensus       107 g~id~li~~ag  117 (297)
                      . =.++|+.+.
T Consensus        82 ~-~~~vi~~~~   91 (209)
T 2raf_A           82 K-GKIVVDITN   91 (209)
T ss_dssp             T-TSEEEECCC
T ss_pred             C-CCEEEEECC
Confidence            3 235555543

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.27  E-value=0.027  Score=48.60  Aligned_cols=39  Identities=15%  Similarity=0.234  Sum_probs=35.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      .+++||+++|.|++.-+|+.++..|..+|++|+++.++.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  199 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT  199 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence            479999999999999999999999999999999987654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.27  E-value=0.3  Score=42.75  Aligned_cols=116  Identities=16%  Similarity=0.208  Sum_probs=72.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCC------CeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGP------NATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~------~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ++-+.+++.|+|+ |.+|..++..++..+.  .+++.|++.++++....++..      .+... .|  +.++       
T Consensus         5 ~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a-------   73 (326)
T 2zqz_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD-------   73 (326)
T ss_dssp             -CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH-------
Confidence            3455578999999 9999999999998875  799999998877665544421      22222 22  2222       


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                          +...|++|..+|....+     ..+.   .+.+..|+.-...+.+.+..+   ...+.++++|.-.
T Consensus        74 ----~~~aDvVii~ag~~~k~-----g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  128 (326)
T 2zqz_A           74 ----AKDADLVVITAGAPQKP-----GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV  128 (326)
T ss_dssp             ----GGGCSEEEECCCCC----------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred             ----hCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence                22679999999865211     1222   345666666555555555554   2457777776543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.24  E-value=0.027  Score=50.04  Aligned_cols=38  Identities=24%  Similarity=0.510  Sum_probs=33.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            4688999999998 8999999999999997 588888753

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.24  E-value=0.39  Score=41.65  Aligned_cols=111  Identities=19%  Similarity=0.178  Sum_probs=71.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHhCC------CeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKELGP------NATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~~~------~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++.|+|+ |.+|..++..++..+  ..+++.|++.++++....++..      .+... .|  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            46889998 999999999999987  5799999998877765544422      22222 22  2222           2


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      ...|++|..+|....+     ..+..   +.+..|..-...+.+.+.++   ...+.++++|.-.
T Consensus        66 ~~aD~Vii~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  119 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP-----GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV  119 (310)
T ss_dssp             TTEEEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC-----CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            3789999999875321     12332   34666666555555555554   2457777776533

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.20  E-value=0.12  Score=46.08  Aligned_cols=79  Identities=10%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .+|+-..|+++|+|+ +.+|+.+++.+.+.|++|++++.+.....   ....+  ..+..|..|.+.+.+++++.     
T Consensus         5 ~pm~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~---~~~~d--~~~~~~~~d~~~l~~~~~~~-----   73 (391)
T 1kjq_A            5 TALRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA---MHVAH--RSHVINMLDGDALRRVVELE-----   73 (391)
T ss_dssp             CTTSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG---GGGSS--EEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCch---hhhcc--ceEECCCCCHHHHHHHHHHc-----
Confidence            345556789999987 57999999999999999999987654311   11111  34567888887777666543     


Q ss_pred             CccEEEECcc
Q 022418          108 QLDIMYNNAG  117 (297)
Q Consensus       108 ~id~li~~ag  117 (297)
                      ++|.++...+
T Consensus        74 ~~d~v~~~~e   83 (391)
T 1kjq_A           74 KPHYIVPEIE   83 (391)
T ss_dssp             CCSEEEECSS
T ss_pred             CCCEEEECCC
Confidence            7999986543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.17  E-value=0.038  Score=52.21  Aligned_cols=37  Identities=22%  Similarity=0.342  Sum_probs=32.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            5788999999998 8999999999999998 58888554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.16  E-value=0.79  Score=40.11  Aligned_cols=116  Identities=12%  Similarity=0.065  Sum_probs=71.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh------CCCeeEE-EecCCCHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL------GPNATFI-ACDVTKESDVSDAVD  100 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~------~~~v~~~-~~D~s~~~~i~~~~~  100 (297)
                      ..-..+++.|+|+ |.+|..++..++..|.  .|++.|.++++++....++      ....... ..|..+         
T Consensus        17 ~~~~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~---------   86 (330)
T 3ldh_A           17 EPRSYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV---------   86 (330)
T ss_dssp             CCCCCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH---------
Confidence            3335688999999 9999999999999997  8999999988766544333      1111111 123211         


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                           +...|++|..||....+ +    .+.   .+.+..|+.-.-.+.+.+.++   ...+.++++|.-.
T Consensus        87 -----~~daDiVIitaG~p~kp-G----~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 -----SAGSKLVVITAGARQQE-G----ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             -----CSSCSEEEECCSCCCCS-S----CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             -----hCCCCEEEEeCCCCCCC-C----CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence                 23689999999975321 1    121   234455555444455555544   2356777776543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.08  E-value=0.024  Score=62.55  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      -.|.+|||.||+|++|.+.+......|++|++++++.++.+...+..   +.. ++  .|..+.+-.+++.+..  ...+
T Consensus      1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~-~v--~~~~~~~~~~~i~~~t--~g~G 1740 (2512)
T 2vz8_A         1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET-CF--ANSRDTSFEQHVLRHT--AGKG 1740 (2512)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST-TE--EESSSSHHHHHHHHTT--TSCC
T ss_pred             CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce-EE--ecCCCHHHHHHHHHhc--CCCC
Confidence            36889999999999999999888889999999999888777666543   222 12  2444432222222211  1125


Q ss_pred             ccEEEECcc
Q 022418          109 LDIMYNNAG  117 (297)
Q Consensus       109 id~li~~ag  117 (297)
                      +|+++++.|
T Consensus      1741 vDvVld~~g 1749 (2512)
T 2vz8_A         1741 VDLVLNSLA 1749 (2512)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEECCC
Confidence            899988765

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.07  E-value=0.044  Score=48.43  Aligned_cols=77  Identities=16%  Similarity=0.095  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|++|+|+|++|++|...+......| .+|+.++ +.++.+...  ++... .  .| .+.+ ..+.+.++.  .+++|
T Consensus       141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~-~--~~-~~~~-~~~~~~~~~--~~g~D  210 (349)
T 4a27_A          141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTH-L--FD-RNAD-YVQEVKRIS--AEGVD  210 (349)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSE-E--EE-TTSC-HHHHHHHHC--TTCEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcE-E--Ec-CCcc-HHHHHHHhc--CCCce
Confidence            367899999999999998877665564 6788777 444444333  44322 2  23 3322 222333332  24799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.+.|.
T Consensus       211 vv~d~~g~  218 (349)
T 4a27_A          211 IVLDCLCG  218 (349)
T ss_dssp             EEEEECC-
T ss_pred             EEEECCCc
Confidence            99999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	297
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-74
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-73
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-71
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-67
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-67
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-66
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-66
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-65
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-65
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-64
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-64
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-64
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-62
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-61
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-60
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-60
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-60
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-60
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-60
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-60
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-60
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-59
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-59
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	6e-59
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-59
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-58
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-58
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-58
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-58
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-58
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-58
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	9e-58
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-57
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-57
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-57
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-56
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	8e-56
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-54
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	3e-54
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-53
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-52
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-52
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-50
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-50
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-49
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-46
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-46
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-45
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-44
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-42
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-42
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-41
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-40
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-38
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-37
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-36
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-34
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-33
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-33
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-25
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-24
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-18
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	4e-17
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-16
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-08
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-06
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	7e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	4e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  225 bits (574), Expect = 7e-74
 Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 9/254 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
               K  L+TG A GIG+A A  F   GA V + D++ + G++ A+ +G    F   D+ 
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDLE 58

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E +    V+       ++D++ NNA +A   P S + + L  + +V+ +N+   +    
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            + R M     G I+  ASV GL        Y+ SK  ++ L +S+A +L    IR+N +
Sbjct: 117 LAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV 176

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P AI T  V+E ++      D  R          L     +P ++A A L+LAS+ A +
Sbjct: 177 APGAIATEAVLEAIAL---SPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASF 232

Query: 271 VSGHNLVVDGGFTS 284
           ++G  L VDGG T+
Sbjct: 233 ITGAILPVDGGMTA 246

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  223 bits (570), Expect = 4e-73
 Identities = 120/256 (46%), Positives = 165/256 (64%), Gaps = 8/256 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACD 88
           +L++KVA+ITG A GIG+ TA  F+  GAKVVIADI    GQ+    +G     +F+ CD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VTK+ DV + VD TI+KH +LDIM+ N GV   TP SI++   E F +VM INV G    
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            KH+ RVMIP + G I+ TAS++    G    H Y+ +K A++GL  S+  EL EYGIR+
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 182

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           NC+SP+ + +P + +       GVD+SR+ EL +    L+GT     D+A+A  YLA D+
Sbjct: 183 NCVSPYIVASPLLTDVF-----GVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 237

Query: 268 AKYVSGHNLVVDGGFT 283
           +KYVSG NLV+DGG+T
Sbjct: 238 SKYVSGLNLVIDGGYT 253

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  218 bits (556), Expect = 3e-71
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 11/254 (4%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKELGPNATFIACDV 89
           +L++K+A+ITG A+GIG+A A +F   GA + IAD+      +   + LG     + CDV
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV 61

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
           ++  DV       IS   + DI+ NNAG+         +L  E + +   INV       
Sbjct: 62  SQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
           K     M     G I+   S T  L   A   Y  +K+A IG  +++A++L + GI +N 
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           I+P  + T             V  + L  +             P D+  AA +LASDDA 
Sbjct: 180 IAPSLVRTATTEASALSAMFDVLPNMLQAI--------PRLQVPLDLTGAAAFLASDDAS 231

Query: 270 YVSGHNLVVDGGFT 283
           +++G  L VDGG  
Sbjct: 232 FITGQTLAVDGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  209 bits (533), Expect = 2e-67
 Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 10/262 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +  EKVA+ITG+++GIG+ATA  F   GAKV I     +  ++T +++        N   
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRS--IVDLNLEVFDQVMRINV 142
           +  DVT ++   + +  T+ K  +LDI+ NNAG A    +S      ++E +D  + +N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           R V+A  K +   +   +   +  ++  +GL        YS++K+AI    ++ A +L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +GIR+N ISP  + T F    M                    V  G   +P DIA    +
Sbjct: 182 HGIRVNSISPGLVATGF-GSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 240

Query: 263 LASDD-AKYVSGHNLVVDGGFT 283
           LA    + Y+ GH LVVDGG +
Sbjct: 241 LADRKTSSYIIGHQLVVDGGSS 262

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (531), Expect = 2e-67
 Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 8/253 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +   KV ++TG   GIG      F+++GA+VVI D     G+   +EL   A FI CDVT
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVT 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           +E DV   V  TI +  +LD + NNAG     P+   + + + F Q++ +N+ G     K
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHH-PPPQRPEETSAQGFRQLLELNLLGTYTLTK 120

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +   +  +  G ++  +S+ G +G      Y  +K A+  + K++A +   YG+R+NCI
Sbjct: 121 LALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCI 179

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           SP  I TP   EE++ +     AS    ++       G   +P ++  AA++LAS +A +
Sbjct: 180 SPGNIWTPL-WEELAALMPDPRASIREGML---AQPLGRMGQPAEVGAAAVFLAS-EANF 234

Query: 271 VSGHNLVVDGGFT 283
            +G  L+V GG  
Sbjct: 235 CTGIELLVTGGAE 247

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  206 bits (525), Expect = 2e-66
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 10/255 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ KVAL+TG ASG+G       +  GAKV  +DI    GQQ A ELG  + F+  DV+
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS 62

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            E+D +  +     +   L+++ NNAG+    P  +    LE F ++++IN   V  G +
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE--YGIRIN 208
                M     G I+  ASV+  L       YS SK+A+  L ++ A    +  Y IR+N
Sbjct: 121 QGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I P  I TP +   + +   GV    +L          G    P  IA   L+LASD++
Sbjct: 180 SIHPDGIYTPMMQASLPK---GVSKEMVLHDPKLNRA--GRAYMPERIAQLVLFLASDES 234

Query: 269 KYVSGHNLVVDGGFT 283
             +SG  L  D    
Sbjct: 235 SVMSGSELHADNSIL 249

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  205 bits (523), Expect = 4e-66
 Identities = 85/262 (32%), Positives = 124/262 (47%), Gaps = 19/262 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  K  +ITG A G+G   A + ++ GA+VV+AD+  + G  TA+ELG  A +   DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
           E D    V +   +   +D + NNAG    T   +   ++E F +V+ IN+ GV  G+K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAG--ISTGMFLETESVERFRKVVEINLTGVFIGMKT 120

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M     G I+  +S  GL+G     +Y  SK  + GL K  A EL    IR+N + 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 212 PFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           P    TP      + +    Y      R+               EP +IA A + L SD 
Sbjct: 181 PGMTYTPMTAETGIRQGEGNYPNTPMGRVG-------------NEPGEIAGAVVKLLSDT 227

Query: 268 AKYVSGHNLVVDGGFTSFKNLK 289
           + YV+G  L VDGG+T+   +K
Sbjct: 228 SSYVTGAELAVDGGWTTGPTVK 249

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  203 bits (517), Expect = 4e-65
 Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 10/262 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +   K  +ITG+++GIG+ TA  F   GA V I     +  ++T + +            
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP--RSIVDLNLEVFDQVMRINV 142
           +  DVT E      ++ T+ +  ++D++ NNAG A       +  D  ++++ + +++N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
           + V+   K     ++  +   +  ++ V G         Y+++K+A+    +S A +L +
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           +GIR+N +SP  + T F    M                +   +  G   +P  IAN  L+
Sbjct: 182 FGIRVNSVSPGMVETGF-TNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 240

Query: 263 LASDDA-KYVSGHNLVVDGGFT 283
           LA  +   Y+ G ++V DGG +
Sbjct: 241 LADRNLSFYILGQSIVADGGTS 262

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  203 bits (517), Expect = 4e-65
 Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 8/260 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATF 84
           +   K  +ITG+++GIG++ A  F   GA+V I        ++T +++            
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           +  DVT+ S   D ++ T++K  ++DI+ NNAG       +  D  +E++ +  ++N + 
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
           V+   + +   +I  +   +  ++ V G         Y+ +K+A+    +  A +L ++G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +R+N +SP A+ T F M  M       D            +  G   +P +IAN  ++LA
Sbjct: 181 VRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 239

Query: 265 SDD-AKYVSGHNLVVDGGFT 283
             + + Y+ G ++V DGG T
Sbjct: 240 DRNLSSYIIGQSIVADGGST 259

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  201 bits (511), Expect = 2e-64
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 15/255 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
            E KVAL+TGA  GIG+  A     + + V+      +       E+   G  ++  A D
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           V+K+ ++S+ ++  +++H  +DI+ NN           + +  + ++ V+R N+  +   
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNN--AGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
            +  ++ MI  R G I+  +S+ GL G + Q  YS SK+ +IG  KS+A EL    I +N
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 185

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I+P  I +    +   QI   + ++             G    P ++AN A +L+SD +
Sbjct: 186 AIAPGFISSDMTDKISEQIKKNIISNIPA----------GRMGTPEEVANLACFLSSDKS 235

Query: 269 KYVSGHNLVVDGGFT 283
            Y++G   V+DGG +
Sbjct: 236 GYINGRVFVIDGGLS 250

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  199 bits (508), Expect = 7e-64
 Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 11/257 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           LE   AL+TG + GIG     +  S GA V       +       +    G       CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 89  VTKESDVSDAVDFTISK-HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           ++  S+  + ++   +  H +L+I+ NNAG+     +   D  +E +  +M IN      
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
               +   +     G ++  +SV+G L    +  Y  +K A+  L + +A E  +  IR+
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N + P  I T  V   +       + ++L++             EP ++A    +L    
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLID-----RCALRRMGEPKELAAMVAFLCFPA 238

Query: 268 AKYVSGHNLVVDGGFTS 284
           A YV+G  + VDGG  +
Sbjct: 239 ASYVTGQIIYVDGGLMA 255

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  199 bits (507), Expect = 8e-64
 Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 16/261 (6%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIA 86
           S +L+ KVA+ITG   GIG A A KF+  GAKV+I      +G++ AK +G      F  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D + E   +   D T      +  + NNAG+     +S+ +     + +++ +N+ GV 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 147 AGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE--LCEY 203
            G +   + M  +  G  I+  +S+ G +G  +   Y+ SK A+  + KS A +  L +Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            +R+N + P  I TP V +      A    ++            G   EPNDIA   +YL
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTK---------TPMGHIGEPNDIAYICVYL 229

Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           AS+++K+ +G   VVDGG+T+
Sbjct: 230 ASNESKFATGSEFVVDGGYTA 250

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  195 bits (496), Expect = 4e-62
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 15/256 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+ K  L+TG   GIG A   +F   GA +           +   +    G   T   CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
            +   +    +    S    +LDI+ NN G      +  +D   E F   +  N+     
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAI--RSKPTLDYTAEDFSFHISTNLESAYH 123

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +  ++     G I+  +S+ G++       YS +K A+  L +++A E    GIR 
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I TP         +  V  SR            G   EP ++++   +L    
Sbjct: 184 NAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPA 234

Query: 268 AKYVSGHNLVVDGGFT 283
           A Y++G  + VDGG T
Sbjct: 235 ASYITGQTICVDGGLT 250

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  193 bits (492), Expect = 1e-61
 Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L++K  LITGAA GIG+AT   F   GA++V  DI+    ++ A+ +G  A  +  DV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVA 59

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             + V       ++   +LD + + AG+          + LE ++ V+R+N+ G     K
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            ++  M  +  G I+ TAS    LG L Q  Y+ S + ++GL +++A EL  +GIR+N +
Sbjct: 118 AASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTL 176

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P  I T    +   ++     A+  L          G   +P ++A AAL+L SD++ +
Sbjct: 177 APGFIETRMTAKVPEKVREKAIAATPL----------GRAGKPLEVAYAALFLLSDESSF 226

Query: 271 VSGHNLVVDGGFT 283
           ++G  L VDGG T
Sbjct: 227 ITGQVLFVDGGRT 239

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  192 bits (488), Expect = 1e-60
 Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 6/257 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           KL+ +  LITG ASG+G+A   +F++ GAKV + D   +   +   + G N   I  DV 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVR 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEV---FDQVMRINVRGVVA 147
              D   A    +++  ++D +  NAG+   +   +      +   FD+V  INV+G + 
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
            +K     ++  R G ++ T S  G         Y+ +K AI+GLV+ +A EL  Y +R+
Sbjct: 122 AVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRV 179

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS-D 266
           N +    I +         + +   ++  L  +  + +  G   E  +   A ++ A+  
Sbjct: 180 NGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG 239

Query: 267 DAKYVSGHNLVVDGGFT 283
           DA   +G  L  DGG  
Sbjct: 240 DAAPATGALLNYDGGLG 256

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  192 bits (490), Expect = 1e-60
 Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 32/263 (12%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG---------QQTAKELGPN 81
           + + +V L+TGA  G+G+A A  F   GA VV+ D+               +  +E+   
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 82  ATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRIN 141
                 +          V   +    ++D++ NNAG+     RS   ++ E +D + R++
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL--RDRSFSRISDEDWDIIQRVH 121

Query: 142 VRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELC 201
           +RG     + +   M  +  G I+ TAS +G+ G   Q  YS +K  ++GL  ++  E  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 202 EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL 261
           +  I  N I+P A         M +     D    L              +P  +A   L
Sbjct: 182 KNNIHCNTIAPNAGSRMT-ETVMPE-----DLVEAL--------------KPEYVAPLVL 221

Query: 262 YLASDDAKYVSGHNLVVDGGFTS 284
           +L  +     +G    V  G+  
Sbjct: 222 WLCHESC-EENGGLFEVGAGWIG 243

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  191 bits (486), Expect = 1e-60
 Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 10/261 (3%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA 86
           +K   KV L+TGA   IG ATA +    G  + + D+  +  ++    +   G  A    
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           CDVT E  V   VD  +    ++D ++NNAG        + D   + F +V+ INV G  
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTINVTGAF 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             +K  +R MI +  G I+ TAS+ G+ G      Y  SK AII L ++ A +L  Y IR
Sbjct: 120 HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIR 179

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELV------YSTGVLEGTHCEPNDIANAA 260
           +N ISP  +   F+ E   ++ A V +                 V    + + N+I    
Sbjct: 180 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 239

Query: 261 LYLASDDAKYVSGHNLVVDGG 281
            +L  DD+ +++G NL + GG
Sbjct: 240 AFLLGDDSSFMTGVNLPIAGG 260

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  190 bits (483), Expect = 2e-60
 Identities = 84/255 (32%), Positives = 130/255 (50%), Gaps = 17/255 (6%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           S +L  KVAL++G A G+G +     ++ GAKVV  DI  + G+  A EL   A ++  D
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 60

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           VT+ +    AVD  ++    L ++ NNAG+      +I D  L  + +++ +N+ GV  G
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 149 IKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRIN 208
           I+   + M     G I+  +S+ GL G +A H Y+ +K A+ GL KS A EL   GIR+N
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            I P  + TP   + + +        R                EP +++N  +YLASD++
Sbjct: 179 SIHPGLVKTPM-TDWVPEDIFQTALGRA--------------AEPVEVSNLVVYLASDES 223

Query: 269 KYVSGHNLVVDGGFT 283
            Y +G   VVDGG  
Sbjct: 224 SYSTGAEFVVDGGTV 238

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  190 bits (484), Expect = 3e-60
 Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 15/257 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIAC 87
           +L+ K A+ITGA +GIGK  A  F + GA VV++DI          E+   G  A    C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           D+T E ++S   DF ISK  ++DI+ NNAG          D+ +  F +   +NV     
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             +     M     G IL   S+      +   +Y+ SK+A   LV++MA +L E  IR+
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N I+P AI T  +   ++                          +P DIANAAL+L S  
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQKMLQH---------TPIRRLGQPQDIANAALFLCSPA 235

Query: 268 AKYVSGHNLVVDGGFTS 284
           A +VSG  L V GG   
Sbjct: 236 ASWVSGQILTVSGGGVQ 252

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  190 bits (483), Expect = 4e-60
 Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFI 85
           +  ++V LITG  SG+G+ATA +  + GAK+ + D+  +  + +   +            
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV+ E+ V   V  T  +  ++D  +NNAG+  K            FD+V+ IN+RGV
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGV 119

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
             G++   ++M  + SG ++ TASV G+ G   Q  Y+ +K  ++GL ++ A E   YGI
Sbjct: 120 FLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           RIN I+P AI TP V   M Q+          E +         + E  +IA    +L S
Sbjct: 180 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS--KRYGEAPEIAAVVAFLLS 237

Query: 266 DDAKYVSGHNLVVDGGFT 283
           DDA YV+   + +DGG +
Sbjct: 238 DDASYVNATVVPIDGGQS 255

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  189 bits (482), Expect = 6e-60
 Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 10/256 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACD 88
           L+   AL+TG + GIG A   +    GA+V       +   +  +     G N     CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 89  VTKESDVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           +   ++    +       + +L+I+ NNAGV         D   + ++ +M  N      
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYH 121

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRI 207
             + +  ++   ++G ++  +S+ G     +   YS SK AI  + KS+A E  +  IR+
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 208 NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           N ++P  I TP V   + +     +        +      G   +P +++    +L    
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEID----NFIVKTPMGRAGKPQEVSALIAFLCFPA 237

Query: 268 AKYVSGHNLVVDGGFT 283
           A Y++G  +  DGGFT
Sbjct: 238 ASYITGQIIWADGGFT 253

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  189 bits (480), Expect = 1e-59
 Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 24/264 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
              K  ++TG   GIG A      + GA V +         +  +++    G       C
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+    V+  +    +    +  +  NAGV+   P    +L  E F  V  +NV GV  
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVFN 124

Query: 148 GIKHSTRVMIPRRSGCIL--------CTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
             +   ++ + ++    +           + + L G L Q  Y+ SK+A   LVK +AAE
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
               GIR+N +SP  + T        +I     ++  L              +P ++   
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL----------NRFAQPEEMTGQ 234

Query: 260 ALYLASDDAKYVSGHNLVVDGGFT 283
           A+ L SD A Y++G    +DGG  
Sbjct: 235 AILLLSDHATYMTGGEYFIDGGQL 258

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 1e-59
 Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 31/266 (11%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFI 85
           +  +++AL+TGA+ GIG A A   +  G KVV         ++ A E             
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 66

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
            CD++ E D+        S+H+ +DI  NNAG+A      ++  +   +  +  +NV  +
Sbjct: 67  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLAL 124

Query: 146 VAGIKHSTRVMIPRR--SGCILCTASVTGL--LGGLAQHTYSVSKSAIIGLVKSMAAELC 201
               + + + M  R    G I+   S++G   L     H YS +K A+  L + +  EL 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 202 E--YGIRINCISPFAIPTPFVM----EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPND 255
           E    IR  CISP  + T F      ++  +  A  +  + L              +P D
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL--------------KPED 230

Query: 256 IANAALYLASDDAKYVSGHNLVVDGG 281
           +A A +Y+ S  A    G   +   G
Sbjct: 231 VAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  186 bits (473), Expect = 6e-59
 Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 15/253 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L  K  L+TGAASGIG+A    F   GA +V  D + +L  +    L   A  +  DV+
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               V       + +  +L  + + AGVA        +L LE +++V+R+N+ G     +
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +  V+        L        LG      Y+  K  ++GL +++A EL   G+R+N +
Sbjct: 120 KAGEVLEEG---GSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
            P  I TP         +     +  L          G    P ++A AAL+L S+++ Y
Sbjct: 177 LPGLIQTPMTAGLPPWAWEQEVGASPL----------GRAGRPEEVAQAALFLLSEESAY 226

Query: 271 VSGHNLVVDGGFT 283
           ++G  L VDGG +
Sbjct: 227 ITGQALYVDGGRS 239

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  187 bits (475), Expect = 6e-59
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKEL---GPNATF 84
           S+ L  KVAL TGA  GIG+  A +    GA VV+      +  ++   EL   G     
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA 60

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I  D++K S+V    D  +S    LD + +N+G+        +++  E+FD+V  +N RG
Sbjct: 61  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME--VWCDELEVTQELFDKVFNLNTRG 118

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY-SVSKSAIIGLVKSMAAELCEY 203
                +   +    RR G I+ T+S+  ++ G+  H   + SK+A+ G  ++ A +    
Sbjct: 119 QFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 176

Query: 204 GIRINCISPFAIPTPFV----MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           G+ +NCI+P  + T              Y G+   ++ E + +   L      P DI  A
Sbjct: 177 GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRA 235

Query: 260 ALYLASDDAKYVSGHNLVVDGG 281
              L  +++++++G  + + GG
Sbjct: 236 VSALCQEESEWINGQVIKLTGG 257

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  185 bits (470), Expect = 2e-58
 Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 20/255 (7%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
                AL+TGA  GIG+ T     ++GAKVV     +      AKE       +  D+  
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGD 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                DA +  +     +D++ NNA +     +  +++  E FD+   +N+R V    + 
Sbjct: 62  W----DATEKALGGIGPVDLLVNNAALV--IMQPFLEVTKEAFDRSFSVNLRSVFQVSQM 115

Query: 152 STRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             R MI R   G I+  +S+   +      TYS +K A+  L K+MA EL  + IR+N +
Sbjct: 116 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 175

Query: 211 SPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
           +P  + T     +    +    +     L              E  D+ N+ L+L SD +
Sbjct: 176 NPTVVLTDMGKKVSADPEFARKLKERHPL----------RKFAEVEDVVNSILFLLSDRS 225

Query: 269 KYVSGHNLVVDGGFT 283
              SG  ++VD G+ 
Sbjct: 226 ASTSGGGILVDAGYL 240

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  185 bits (470), Expect = 2e-58
 Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 12/252 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
            E K+AL+TGA+ GIG+A A    + GAKV+         Q  +  LG N   +  +VT 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            + +   ++   ++  ++DI+ NNAG+        +      ++ ++  N+  V    K 
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE--EWNDIIETNLSSVFRLSKA 119

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
             R M+ +R G I+   SV G +G   Q  Y+ +K+ +IG  KS+A E+   GI +N ++
Sbjct: 120 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 179

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  I T           AG+ A              G      +IANA  +LASD+A Y+
Sbjct: 180 PGFIETDMTRALSDDQRAGILAQVPA----------GRLGGAQEIANAVAFLASDEAAYI 229

Query: 272 SGHNLVVDGGFT 283
           +G  L V+GG  
Sbjct: 230 TGETLHVNGGMY 241

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  185 bits (471), Expect = 2e-58
 Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 27/264 (10%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L  +VAL+TG + G+G   A      G  VV+A    +   + A++L    G       C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DV+   +V   ++    K  +LD + N AG+  + P    +  L+ F QV+ +N+ G   
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYY 120

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCEYGIR 206
             + +  ++    +  I+   S+T     +     Y+ SK  +  L K++A E   YGIR
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 207 INCISPFAIPTPFVM------EEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
           +N I+P    T          E++  +   +   R                 P D+   A
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRT--------------GVPEDLKGVA 226

Query: 261 LYLASDDAKYVSGHNLVVDGGFTS 284
           ++LAS++AKYV+G  + VDGG+T+
Sbjct: 227 VFLASEEAKYVTGQIIFVDGGWTA 250

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (470), Expect = 2e-58
 Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 13/254 (5%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ KV ++T AA GIG+A A  F   GAKV+  DI     Q+  K  G        DVT
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVT 60

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           K+  +    +       +LD+++N AG        ++D   + +D  M +NVR +   IK
Sbjct: 61  KKKQIDQFANE----VERLDVLFNVAGFVHHGT--VLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINC 209
                M+ ++SG I+  +SV   + G+     YS +K+A+IGL KS+AA+  + GIR NC
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
           + P  + TP + E +       +A       +      G      +IA   +YLASD++ 
Sbjct: 175 VCPGTVDTPSLQERIQARGNPEEARN----DFLKRQKTGRFATAEEIAMLCVYLASDESA 230

Query: 270 YVSGHNLVVDGGFT 283
           YV+G+ +++DGG++
Sbjct: 231 YVTGNPVIIDGGWS 244

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (474), Expect = 2e-58
 Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 17/263 (6%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--------GPNA 82
            L+ +VA++TG A+GIGKA   + +  G+ VVIA  + +  +  A EL            
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
             I C++  E +V++ V  T+    +++ + NN G    +P     ++ + +  V+  N+
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEHISSKGWHAVLETNL 126

Query: 143 RGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE 202
            G     K      +    G I+     T   G         +++ +  L KS+A E   
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWAC 185

Query: 203 YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
            GIRINC++P  I +   +E                      +       P ++++   +
Sbjct: 186 SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF------QKIPAKRIGVPEEVSSVVCF 239

Query: 263 LASDDAKYVSGHNLVVDGGFTSF 285
           L S  A +++G ++ VDGG + +
Sbjct: 240 LLSPAASFITGQSVDVDGGRSLY 262

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  186 bits (472), Expect = 3e-58
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 12/267 (4%)

Query: 25  LSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GP 80
           L  +S  LE KVAL+TGA  GIG+  A +    G KV++      +  ++    +   G 
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 68

Query: 81  NATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRI 140
           +A  +  +V    D+    +  +    +LDI+ +N+G    +   + D+  E FD+V  I
Sbjct: 69  DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG--VVSFGHVKDVTPEEFDRVFTI 126

Query: 141 NVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTY-SVSKSAIIGLVKSMAAE 199
           N RG     + + + +       ++ + +  G    + +H   S SK AI    + MA +
Sbjct: 127 NTRGQFFVAREAYKHLEIGGRLILMGSIT--GQAKAVPKHAVYSGSKGAIETFARCMAID 184

Query: 200 LCEYGIRINCISPFAIPTPF---VMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDI 256
           + +  I +N ++P  I T     V  E       +    + E              P DI
Sbjct: 185 MADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 244

Query: 257 ANAALYLASDDAKYVSGHNLVVDGGFT 283
           A    +LAS+D  +V+G  + +DGG  
Sbjct: 245 ARVVCFLASNDGGWVTGKVIGIDGGAC 271

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  184 bits (467), Expect = 9e-58
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 6/247 (2%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
           A++T      G  +A +    G  V   D   +   +         T+       E + +
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF---AETYPQLKPMSEQEPA 59

Query: 97  DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM 156
           + ++   S + Q+D++ +N   A    + I    +E +   +        A +      M
Sbjct: 60  ELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 118

Query: 157 IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIP 216
             R+SG I+   S T         TY+ +++    L  +++ EL EY I +  I P  + 
Sbjct: 119 KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 178

Query: 217 TPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNL 276
           +              +   +  +   T +         ++     +LAS    Y++G   
Sbjct: 179 SEDSPYFYPTEPWKTNPEHVAHVKKVTAL--QRLGTQKELGELVAFLASGSCDYLTGQVF 236

Query: 277 VVDGGFT 283
            + GGF 
Sbjct: 237 WLAGGFP 243

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 2e-57
 Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 16/253 (6%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           L  +  L+TGA  GIG+ T     + GA+VV             +E       +  D+  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                +A +  +     +D++ NNA VA    +  +++  E FD+   +N+R V+   + 
Sbjct: 64  W----EATERALGSVGPVDLLVNNAAVAL--LQPFLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 152 STRVMIPRRSGC-ILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
             R +I R     I+  +S            Y  +K A+  L K MA EL  + IR+N +
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY 270
           +P  + T       S  +        + L        G   E   + NA L+L SD +  
Sbjct: 178 NPTVVMTSMGQATWSDPHKAKTMLNRIPL--------GKFAEVEHVVNAILFLLSDRSGM 229

Query: 271 VSGHNLVVDGGFT 283
            +G  L V+GGF 
Sbjct: 230 TTGSTLPVEGGFW 242

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  182 bits (463), Expect = 3e-57
 Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 10/258 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           +VAL+TGA SGIG   A +    G +V +     +  + T KEL   G  A    CDV  
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 62

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
             ++   V   + ++  +D++ NNAG       +  +L  E++  V+  N+ GV    K 
Sbjct: 63  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 152 STRV--MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
             +   M+ R +G I+  AS  G  G +    YS SK  ++G  K++  EL   GI +N 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 210 ISPFAIPTPFV--MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD 267
           + P  + TP    + E       V      + + +   + G + +P+++A    YL    
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGPG 239

Query: 268 AKYVSGHNLVVDGGFTSF 285
           A  V+   L V GG  ++
Sbjct: 240 AAAVTAQALNVCGGLGNY 257

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (462), Expect = 4e-57
 Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 24/259 (9%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDV 89
           KVAL+TGAA GIG+A A   +  GAKV + D   + G Q    L          FI CDV
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 63

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             +  + D     +    +LDI+ NNAGV  +            +++ ++IN+  V++G 
Sbjct: 64  ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN----------WEKTLQINLVSVISGT 113

Query: 150 KHSTRVMIPRRSGC---ILCTASVTGLLGGLAQHTYSVSKSAIIGLVK--SMAAELCEYG 204
                 M  +  G    I+  +S+ GL+    Q  Y  SK  I+G  +  ++AA L   G
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +R+N I P  + T  +     +   G        +            +P  IAN  + L 
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY--YGILDPPLIANGLITLI 231

Query: 265 SDDAKYVSGHNLVVDGGFT 283
            DDA  ++G  + +     
Sbjct: 232 EDDA--LNGAIMKITTSKG 248

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  181 bits (460), Expect = 1e-56
 Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 6/254 (2%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT 90
           +L+ K ALITG+A GIG+A A  ++  GA+V IADI  +  + TA E+GP A  IA DVT
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
            ++ +   V   + +   +DI+ NN   A      IV++  E +D++  INV G +  ++
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNN--AALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 151 HSTRVMIPRRSGCILCTASVT-GLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINC 209
              R MI    G  +   +   G  G      Y  +K+A+I L +S    L  +GI +N 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179

Query: 210 ISPFAIPTPFVMEEMSQIYAGVDASRLLELV--YSTGVLEGTHCEPNDIANAALYLASDD 267
           I+P  +      + +   +A  +     E        V  G      D+   A++LA+ +
Sbjct: 180 IAPGVVDGEH-WDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238

Query: 268 AKYVSGHNLVVDGG 281
           A Y+      VDGG
Sbjct: 239 ADYIVAQTYNVDGG 252

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  180 bits (457), Expect = 3e-56
 Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 9/260 (3%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ-----HQLGQQTAKELGPNATFIA 86
           L+ KVA++TG+ SGIG   A    + GA +V+          ++    A + G    +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D++K   V   VD  + +  ++DI+ NN     +    I D   E +D ++ +N+  V 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN--AGIQHTALIEDFPTEKWDAILALNLSAVF 119

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
            G   +   M  +  G I+  AS  GL+    +  Y  +K  ++G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 207 INCISPFAIPTPFVMEEMSQIYA--GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
            N I P  + TP V +++S +    GVD       + S          P  +   A++LA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 265 SDDAKYVSGHNLVVDGGFTS 284
           SD A  ++G  + VDGG+T+
Sbjct: 240 SDAAAQITGTTVSVDGGWTA 259

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  180 bits (457), Expect = 8e-56
 Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 14/260 (5%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATF 84
               + KVA ITG  +G+GK       S GA+ VIA  +  + + TA+++    G     
Sbjct: 20  PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHA 79

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I CDV     V + V   I      +I+ NNA     +P     L+   +  +  I + G
Sbjct: 80  IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP--TERLSPNAWKTITDIVLNG 137

Query: 145 VV-AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                ++   +++  ++    L   ++    G       + +K+ +  + KS+AAE  +Y
Sbjct: 138 TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKY 197

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G+R N I P  I T      +       D +   E      +  G      ++AN A +L
Sbjct: 198 GMRFNVIQPGPIKTKGAFSRL-------DPTGTFEKEMIGRIPCGRLGTVEELANLAAFL 250

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
            SD A +++G  +  DGG  
Sbjct: 251 CSDYASWINGAVIKFDGGEE 270

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  174 bits (442), Expect = 2e-54
 Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 23/254 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
           + +K  L+  A+ GIG+A A      GA+V I     +L +++         ++ CD+  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------YVVCDLR- 54

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
                  +D    K  ++DI+  NAG          +L  E F + +      ++  +++
Sbjct: 55  -----KDLDLLFEKVKEVDILVLNAGGP--KAGFFDELTNEDFKEAIDSLFLNMIKIVRN 107

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
               M  +  G I+   S + +      +T + ++ A+ G +K+++ E+  YGI +NC++
Sbjct: 108 YLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVA 167

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P    T  V E +S+       S+         +      +P +IA+   +L S+ A Y+
Sbjct: 168 PGWTETERVKELLSEEKKKQVESQ---------IPMRRMAKPEEIASVVAFLCSEKASYL 218

Query: 272 SGHNLVVDGGFTSF 285
           +G  +VVDGG + F
Sbjct: 219 TGQTIVVDGGLSKF 232

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  175 bits (444), Expect = 3e-54
 Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 15/257 (5%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIAC 87
           LE KV +ITG+++G+GK+ A +F +  AKVV+    +        +E+   G  A  +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
           DVT ESDV + V   I +  +LD+M NNAG+    P S  +++L  +++V+  N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLE--NPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 148 GIKHSTRVMIPRRS-GCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
           G + + +  +     G ++  +SV   +       Y+ SK  +  + +++A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N I P AI TP   E+ +      D   ++ +        G   EP +IA  A +LAS 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPM--------GYIGEPEEIAAVAAWLASS 234

Query: 267 DAKYVSGHNLVVDGGFT 283
           +A YV+G  L  DGG T
Sbjct: 235 EASYVTGITLFADGGMT 251

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  172 bits (437), Expect = 2e-53
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 17/254 (6%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVT 90
            V ++TGA+ GIGKA A      G KV++   +     ++ +K++   G  A     DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
           KE+DV   +   I     +D++ NN          ++ +    +D+V+ +N+ GV    +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN--AGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
            +T++M+ +R G I+  ASV GL+G + Q  Y+ +K+ +IG  K+ A E     I +N +
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 211 SPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA-SDDAK 269
            P  I +    +    +   +  +  L          G   +P ++A    +LA S  A 
Sbjct: 180 CPGFIASDMTAKLGEDMEKKILGTIPL----------GRTGQPENVAGLVEFLALSPAAS 229

Query: 270 YVSGHNLVVDGGFT 283
           Y++G    +DGG  
Sbjct: 230 YITGQAFTIDGGIA 243

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  169 bits (429), Expect = 4e-52
 Identities = 84/254 (33%), Positives = 122/254 (48%), Gaps = 7/254 (2%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           KVAL+TGA  GIGKA A + + +G  V IAD      +  A E+   G +A  +  DV+ 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  AV+         D++ NNAGVA  TP     +  E+ D+V  INV+GV+ GI+ 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI--ESITPEIVDKVYNINVKGVIWGIQA 119

Query: 152 STRVMIPRRSGCILCT-ASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCI 210
           +         G  +    S  G +G      YS SK A+ GL ++ A +L   GI +N  
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 211 SPFAIPTPFVMEEMSQIY-AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK 269
            P  + TP   E   Q+  A           ++  +  G   EP D+A    YLAS D+ 
Sbjct: 180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 239

Query: 270 YVSGHNLVVDGGFT 283
           Y++G +L++DGG  
Sbjct: 240 YMTGQSLLIDGGMV 253

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  168 bits (426), Expect = 7e-52
 Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 20/250 (8%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK 91
              +  L+TG   GIG A A +  ++G KV +                     +  DVT 
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG--------SGAPKGLFGVEVDVTD 56

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
              V  A          ++++ +NAG        ++ +  E F++V+  N+ G     + 
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAG--LSADAFLMRMTEEKFEKVINANLTGAFRVAQR 114

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
           ++R M   + G ++   SV+GL G   Q  Y+ SK+ +IG+ +S+A EL +  +  N ++
Sbjct: 115 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 174

Query: 212 PFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV 271
           P  I T        +I  G                      P ++A    +LAS+DA Y+
Sbjct: 175 PGYIDTDMTRALDERIQQGALQFIPA----------KRVGTPAEVAGVVSFLASEDASYI 224

Query: 272 SGHNLVVDGG 281
           SG  + VDGG
Sbjct: 225 SGAVIPVDGG 234

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  164 bits (416), Expect = 2e-50
 Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 27/257 (10%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES 93
           E+ AL+TG ASG+G+A A    + G +VV+ D+         +  G +  ++  DVT+E 
Sbjct: 1   ERSALVTGGASGLGRAAALALKARGYRVVVLDL---------RREGEDLIYVEGDVTREE 51

Query: 94  DVSDAVDFTISKHN-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHS 152
           DV  AV     +      +     G+A K         LE F +V+ +N+ G    ++ +
Sbjct: 52  DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 111

Query: 153 TRV------MIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                        + G I+ TASV    G + Q  Y+ SK  ++ L    A EL  +GIR
Sbjct: 112 AWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIR 171

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +  ++P    TP +     +  A + A                   P + A   L++  +
Sbjct: 172 VVTVAPGLFDTPLLQGLPEKAKASLAAQV---------PFPPRLGRPEEYAALVLHILEN 222

Query: 267 DAKYVSGHNLVVDGGFT 283
               ++G  + +DG   
Sbjct: 223 P--MLNGEVVRLDGALR 237

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  163 bits (413), Expect = 9e-50
 Identities = 51/261 (19%), Positives = 85/261 (32%), Gaps = 29/261 (11%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L  K  +   A  GIG  T+ + +    K  +   + +     A+        N TF   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 88  DVT-KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
           DVT   ++    +     +   +DI+ N AG           L+    ++ + IN  G+V
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG----------ILDDHQIERTIAINFTGLV 112

Query: 147 AGIKHSTRVMIPR---RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
                       R     G I    SVTG         YS SK+A++    S+A      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G+    I+P    TP V    S +      +          +L     + ++        
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAE---------LLLSHPTQTSEQCGQNFVK 223

Query: 264 ASDDAKYVSGHNLVVDGGFTS 284
           A +     +G    +D G   
Sbjct: 224 AIEA--NKNGAIWKLDLGTLE 242

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 3e-49
 Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 18/254 (7%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIA 86
           + +  ++ LITGA  GIG+ TA +F    +K+V+ DI     ++TA +    G       
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D +   D+  +     ++   + I+ NNAGV   +            ++   +NV    
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDL--FATQDPQIEKTFEVNVLAHF 120

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY--- 203
              K     M     G I+  AS  G +       Y  SK A +G  K++  EL      
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G++  C+ P  + T F+    + +   ++   ++  +                    +++
Sbjct: 181 GVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLM----------HGILTEQKMIFI 230

Query: 264 ASDDAKYVSGHNLV 277
            S  A   +   ++
Sbjct: 231 PSSIAFLTTLERIL 244

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  154 bits (391), Expect = 1e-46
 Identities = 58/259 (22%), Positives = 96/259 (37%), Gaps = 33/259 (12%)

Query: 35  KVALITGAASGIGKATAAKFISNGAK-------VVIADIQHQLGQQTAKEL---GPNATF 84
            + LITGA  GIG+A A +F             +V++       ++ + E    G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
           I  D++  +DV       + ++  +D + NNAGV       + DL  E FD  M  N++G
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTNLKG 119

Query: 145 VVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYG 204
                +    +M  + SG I    SV           Y +SK    GLV++M     +  
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 205 IRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA 264
           +RI  + P A+ TP     M         + ++               P DIA   +   
Sbjct: 180 VRITDVQPGAVYTP-----MWGKVDDEMQALMM--------------MPEDIAAPVVQAY 220

Query: 265 SDDAKYVSGHNLV--VDGG 281
              ++ V    ++    G 
Sbjct: 221 LQPSRTVVEEIILRPTSGD 239

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  153 bits (388), Expect = 7e-46
 Identities = 59/273 (21%), Positives = 95/273 (34%), Gaps = 38/273 (13%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL----GPNATFIACDVT 90
            A+ITG A  IG + A +    G +VV+         Q+   EL      +A     D++
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 91  KESDVSDAV----DFTISKHNQLDIMYNNAGVACKTP---------RSIVDLNLEVFDQV 137
             S + D      D +     + D++ NNA     TP          +          ++
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 138 MRINVRGVVAGIKHSTRVMIPRRSGCILCTA-----SVTGLLGGLAQHTYSVSKSAIIGL 192
              N    +  I+   R      +      +          L       Y+++K A+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVYSTGVLEGTH 250
            ++ A EL    IR+N ++P     P  M  E   +    V   +               
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE------------- 229

Query: 251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
                IA+A  +L S DA Y++G  L VDGG  
Sbjct: 230 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  151 bits (382), Expect = 4e-45
 Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 16/258 (6%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIA--C 87
           L  K AL+ G  +   +G A AAK    GA+V ++    +L  +  K        +    
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPR--SIVDLNLEVFDQVMRINVRGV 145
           DVT++ ++             LD + +    A +       +D   + +   + ++   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           VA  + +  ++  R  G I+              +  +++K+A+   V+ +A EL   G+
Sbjct: 126 VAVARRAEPLL--REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS 265
           R+N IS   + T                ++   L          +    ++ N  L+L S
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL--------RRNITQEEVGNLGLFLLS 235

Query: 266 DDAKYVSGHNLVVDGGFT 283
             A  ++G  + VD G+ 
Sbjct: 236 PLASGITGEVVYVDAGYH 253

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  148 bits (375), Expect = 5e-44
 Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 17/260 (6%)

Query: 31  KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIA 86
            L  K  L+TG AS   I    A      GA++       +L  +  +      +   + 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVR 143
           CDV +++ +            + D   ++ G A         +  +  E F     I+  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
             VA  K    ++ P  +  +L  + +         +   ++K+++   V+ MA  +   
Sbjct: 122 SFVAMAKACRSMLNPGSA--LLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
           G+R+N IS   I T                  +  +               D+ N+A +L
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------RRTVTIEDVGNSAAFL 231

Query: 264 ASDDAKYVSGHNLVVDGGFT 283
            SD +  +SG  + VDGGF+
Sbjct: 232 CSDLSAGISGEVVHVDGGFS 251

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (364), Expect = 2e-42
 Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 23/265 (8%)

Query: 29  SRKLEEKVALITGAASGIGKATA---AKFISNGAKVVIADIQHQLGQQTAKEL-----GP 80
           +  L   V ++TGA+ G G+A A   A+ +S G+ ++++     + +Q  +EL       
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 81  NATFIACDVTKESDVSDAV----DFTISKHNQLDIMYNNAGVACKTPR-SIVDLNLEVFD 135
                A D+  E+ V   +    +    +  Q  ++ NNA       +  +   +L   +
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 136 QVMRINVRGVVAGIKHSTRVM--IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLV 193
               +N+  ++     +       P  S  ++  +S+  L        Y   K+A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
           + +AAE  E  +R+   +P  +                  S+L +L       +G   + 
Sbjct: 181 QVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL-----KSDGALVDC 233

Query: 254 NDIANAALYLASDDAKYVSGHNLVV 278
              A   L L   D  + SG ++  
Sbjct: 234 GTSAQKLLGLLQKDT-FQSGAHVDF 257

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 3e-42
 Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%)

Query: 30  RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV 89
           R ++  VA+ITG ASG+G ATA + +  GA  V+ D+ +  G+  AK+LG N  F   DV
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP----RSIVDLNLEVFDQVMRINVRGV 145
           T E DV  A+     K  ++D+  N AG+A  +     +      LE F +V+ +N+ G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 146 VAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAE 199
              I+     M         + G I+ TASV    G + Q  YS SK  I+G+   +A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 200 LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANA 259
           L   GIR+  I+P    TP  +  + +        ++   + S         +P + A+ 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPL-LTSLPE--------KVCNFLASQVPFPSRLGDPAEYAHL 231

Query: 260 ALYLASDDAKYVSGHNLVV 278
              +  +   +++G  + +
Sbjct: 232 VQAIIENP--FLNGEVIRL 248

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 1e-41
 Identities = 46/248 (18%), Positives = 86/248 (34%), Gaps = 12/248 (4%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIAC 87
           L+ K  ++TGA+ GIG+  A      GA VV+     +  Q+           +A +IA 
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71

Query: 88  DVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
            +   +     V         LD++  N      T  ++   ++    + M +N    V 
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFLSYVV 129

Query: 148 GIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE--YGI 205
               +  ++  + +G I+  +S+ G +       YS SK A+ G   S+  E       +
Sbjct: 130 LTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 206 RINCISPFAIPTPFVMEEMSQI--YAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL 263
            I       I T   M+ +S I              +   G          D +     L
Sbjct: 189 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEII-KGGALRQEEVYYDSSLWTTLL 247

Query: 264 ASDDAKYV 271
             + ++ +
Sbjct: 248 IRNPSRKI 255

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  139 bits (351), Expect = 1e-40
 Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 41/270 (15%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
            + +I+G A+GIG AT     + G ++V  DI                  +  D++    
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI--------------RDAEVIADLSTAEG 47

Query: 95  VSDAVDFTISKHNQ-LDIMYNNAGVACKTP--RSIVDLNLEVFDQVMR------------ 139
              A+   ++K ++ +D +   AG+  +T    ++V +N     ++M             
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQP 107

Query: 140 ----INVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVK 194
               I+             + +   +G      ++    G    +  Y+ SK+A+   V+
Sbjct: 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR 167

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN 254
             AA   E G+R+N I+P A  TP +        AG+   R  E +       G   EP+
Sbjct: 168 KRAAAWGEAGVRLNTIAPGATETPLLQ-------AGLQDPRYGESIAKFVPPMGRRAEPS 220

Query: 255 DIANAALYLASDDAKYVSGHNLVVDGGFTS 284
           ++A+   +L S  A YV G  +V+DGG  +
Sbjct: 221 EMASVIAFLMSPAASYVHGAQIVIDGGIDA 250

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 1e-38
 Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 23/258 (8%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADI------QHQLGQQTAKEL---GPNATFI 85
            V LITG +SGIG   A +  S+ ++                  + A+ L     +   +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             DV     V+ A +        + +              +  L  +    V+ +NV G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAG----LGLLGPLEALGEDAVASVLDVNVVGT 118

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V  ++     M  R SG +L T SV GL+G      Y  SK A+ GL +S+A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 206 RINCISPFAIPTPFV------MEEMSQIYAGVDASRLLE-LVYSTGVLEGTHCEPNDIAN 258
            ++ I    + T F+       EE+          R  + L +S  V       P ++A 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 259 AALYLASDD---AKYVSG 273
             L          +Y + 
Sbjct: 239 VFLTALRAPKPTLRYFTT 256

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (336), Expect = 1e-38
 Identities = 33/258 (12%), Positives = 69/258 (26%), Gaps = 34/258 (13%)

Query: 33  EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKE 92
           E +  L+ G    +G      F +    V   D+          E    +  +    +  
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDV-------VENEEASASVIVKMTDSFT 53

Query: 93  SDVSDAVDFTIS--KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
                            ++D +   AG       +      +  D + + ++        
Sbjct: 54  EQADQVTAEVGKLLGDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRIN 208
            +T+ +            +   L G      Y ++K A+  L +S+A +      G    
Sbjct: 113 LATKHLKEGGLLT--LAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 170

Query: 209 CISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA 268
            + P  + TP   + M +     D S                     +        + + 
Sbjct: 171 AVLPVTLDTPMNRKSMPEA----DFSSWT--------------PLEFLVETFHDWITGNK 212

Query: 269 KYVSGHNLVV--DGGFTS 284
           +  SG  + V    G T 
Sbjct: 213 RPNSGSLIQVVTTDGKTE 230

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  131 bits (330), Expect = 2e-37
 Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 12/257 (4%)

Query: 31  KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAK--ELGPNATFIA 86
            L+ K  LI G A+   I    A    + GA +    +   L ++     +   +     
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            DV+KE       +        LD + ++   A K       L          + +    
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 147 AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIR 206
                +T   +      +L  + +         +   ++K+A+   V+ +A +L ++ IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 207 INCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD 266
           +N +S   I T            G+   R++            +    ++ NA +YL S 
Sbjct: 182 VNALSAGPIRTLASS--------GIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233

Query: 267 DAKYVSGHNLVVDGGFT 283
            +  VSG    VD G+ 
Sbjct: 234 LSSGVSGEVHFVDAGYH 250

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 8e-37
 Identities = 49/290 (16%), Positives = 85/290 (29%), Gaps = 80/290 (27%)

Query: 35  KVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVT 90
            VAL+TG   GIG A            VV+       GQ   ++L   G +  F   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
               +    DF   ++  LD++ NNAG+A     +         +  M+ N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIA--FKVADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTY---------------------------- 182
               ++  +  G ++  +S+  +    +                                
Sbjct: 122 ELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 183 -------------SVSKSAIIGLVKSMAAELCEY----GIRINCISPFAIPTPFVMEEMS 225
                         V+K  +  L +  A +L E      I +N   P  + T     + +
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 226 QIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA--SDDAKYVSG 273
           +                          P + A   +YLA    DA+   G
Sbjct: 240 K-------------------------SPEEGAETPVYLALLPPDAEGPHG 264

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  128 bits (323), Expect = 2e-36
 Identities = 31/207 (14%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKE 92
              ++TGA  GIG     + + +     ++      +   +           +   VT +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 93  SDVSDAVDFTISKHNQ--LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK 150
             +   V           L ++ NNAGV   +  +  + N  V  + + +N   VV   +
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 151 HSTRVMIPRRSG------------------CILCTASVTGLLGGLAQHTYSVSKSAIIGL 192
               ++    S                    +      T          Y +SK+AI   
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 193 VKSMAAELCEYGIRINCISPFAIPTPF 219
            +++A +L +  + +    P  + T  
Sbjct: 183 GRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  124 bits (310), Expect = 2e-34
 Identities = 52/262 (19%), Positives = 94/262 (35%), Gaps = 9/262 (3%)

Query: 32  LEEKVALITGAA--SGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKELGPNATFIACD 88
           L+ K  L++G    S I    A      GA++V+      +L Q+    L   A  +  D
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 89  VTKESD---VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
           V  E     ++  V   I   N+LD + ++ G   +T   I       +  V +      
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
            +    +  ++     G  +            A +  +V+KSA+  + + +A E  +YG+
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183

Query: 206 RINCISPFAIPTPFV---MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY 262
           R N ++   I T  +   +       AG     L E       +     +   +A     
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243

Query: 263 LASDDAKYVSGHNLVVDGGFTS 284
           L SD     +G  +  DGG  +
Sbjct: 244 LLSDWLPATTGDIIYADGGAHT 265

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  121 bits (304), Expect = 2e-33
 Identities = 54/288 (18%), Positives = 94/288 (32%), Gaps = 51/288 (17%)

Query: 36  VALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---------------- 78
           VAL+TGAA  +G++ A    + G  V +   +        +  L                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 79  -----GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTP---------- 123
                  +    +  VT  +  ++ V    +   + D++ NNA     TP          
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 124 --RSIVDLNLEVFDQVMRINVRGVVAGIKHS------TRVMIPRRSGCILCTASVTGLLG 175
                 +        +   N       IK        T       +  I+          
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASR 235
            L    Y+++K A+ GL +S A EL    IR+N + P        M              
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP-----------A 232

Query: 236 LLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT 283
           + E   S   L        ++++  ++L S  AKY++G  + VDGG++
Sbjct: 233 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  118 bits (297), Expect = 7e-33
 Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 33/250 (13%)

Query: 37  ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVS 96
            ++ G    +G A    F  NG  V+  D+       +A +   +   +  +        
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDL-------SANDQADSNILVDGNKNWTEQEQ 57

Query: 97  DAVDFTIS--KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
             ++ T S  + +Q+D ++  AG       +     ++  D +++ +V       K +T 
Sbjct: 58  SILEQTASSLQGSQVDGVFCVAGGWAG-GSASSKDFVKNADLMIKQSVWSSAIAAKLATT 116

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAEL--CEYGIRINCISP 212
            + P     +  T +   +    +   Y ++K+A+  L  S+AA+         +  I P
Sbjct: 117 HLKPGG--LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP 174

Query: 213 FAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL-YLASDDAKYV 271
             + TP   + M       D S                   + I+   L +     ++  
Sbjct: 175 VTLDTPMNRKWMPNA----DHSSWT--------------PLSFISEHLLKWTTETSSRPS 216

Query: 272 SGHNLVVDGG 281
           SG  L +   
Sbjct: 217 SGALLKITTE 226

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  105 bits (262), Expect = 4e-27
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 74/323 (22%)

Query: 34  EKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG------------ 79
           E +  I G     G G   A +      K++                             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 80  -----------------------PNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNA 116
                                          ++ +   + D  +    K+ +++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 117 GVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG 176
             A +  + +++ + + +   +  +   +++  K+    ++  +S  I  T   +  +  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY-FVNIMKPQSSIISLTYHASQKVVP 180

Query: 177 LAQHTYSVSKSAIIGLVKSMAAEL-CEYGIRINCISPFAIPTPFV-----MEEMSQIYAG 230
                 S +K+A+    + +A  L   Y IRIN IS   + +        +    +    
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 231 VDASRLLELVYSTGVLEGTH------------------------------CEPNDIANAA 260
            + +R    V++     G                                    DI + A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 261 LYLASDDAKYVSGHNLVVDGGFT 283
            +L S +++ ++G  + VD G  
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLN 323

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 43/268 (16%), Positives = 80/268 (29%), Gaps = 47/268 (17%)

Query: 35  KVALITGAASGIGKATAAKFIS---NGAKVVIADIQHQLGQQTAKEL--GPNATFIACDV 89
              LITG   G+G       ++       +       +  ++         N   +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 90  TKESDVSD--AVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVA 147
                     A    ++K   L++++NNAG+A K+ R       +     ++ N    + 
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV-RSQELLDTLQTNTVVPIM 121

Query: 148 GIKHSTRVMIPRRS-----------GCILCTASVTGLLGGLA---QHTYSVSKSAIIGLV 193
             K    ++                  I+  +S+ G + G      + Y  SKSA+    
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 194 KSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP 253
           KS++ +L    I    + P  + T      M    A +D                     
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTD-----MGGSSAPLDVPT----------------ST 220

Query: 254 NDIANAALYLASDDAKYVSGHNLVVDGG 281
             I      L        +G  +  DG 
Sbjct: 221 GQIVQTISKLGEKQ----NGGFVNYDGT 244

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 97.5 bits (241), Expect = 2e-24
 Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 46/300 (15%)

Query: 32  LEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------- 78
           L  K A I G A   G G A A    + GA++++      L                   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 79  ------------------------GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN 114
                                              +    V +A +        +DI+ +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL 174
           +     +  + +++ + + +   +  +    V+ + H   +M P  +   L   +   ++
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS 234
            G      S   +              +  IR+N I                  A     
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTI-------SAGPLGSRAAKAIGFID 238

Query: 235 RLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPV 294
            ++E  Y+   +       +++ NAA +L S  A  ++G  + VD G  S   + L +PV
Sbjct: 239 TMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS-MGVALDSPV 296

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 77.6 bits (190), Expect = 8e-18
 Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 17/177 (9%)

Query: 32  LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDV 89
           ++ K A++      +G  +AA     GA+VV+   +    Q  A  +         A + 
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGI 149
             ++  ++AV            ++    +       +  L    +     I +       
Sbjct: 81  ADDASRAEAVK-------GAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQ 127

Query: 150 KHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
                  I     G         G LG +      + ++ I  L +S         I
Sbjct: 128 PPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 77.0 bits (188), Expect = 4e-17
 Identities = 25/199 (12%), Positives = 53/199 (26%), Gaps = 4/199 (2%)

Query: 26  STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFI 85
           +T+         L+TG   G+G   A      GA  ++   +       A EL      +
Sbjct: 1   ATDDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL 60

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
               T  +      +        +      + V              +  + +    R  
Sbjct: 61  GARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAK 120

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V G ++   +         +  +S     G      Y+   + + GL    A +    G+
Sbjct: 121 VLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGL 176

Query: 206 RINCISPFAIPTPFVMEEM 224
               ++        + E  
Sbjct: 177 PATAVAWGTWAGSGMAEGP 195

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 72.8 bits (177), Expect = 7e-16
 Identities = 25/200 (12%), Positives = 62/200 (31%), Gaps = 6/200 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTK 91
           +VAL+ G    +GK  A +  + G ++V+   + +  +  A E      +A+        
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKH 151
            ++  D    TI   + +D   +   +  +     V   + V             +  + 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIV--VSPLVPVSRGAKGFTYSSERSAAEI 118

Query: 152 STRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCIS 211
              V+   +    L T           +  + V         K +   L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 212 PFAIPTPFVMEEMSQIYAGV 231
              +    ++E ++ +   +
Sbjct: 179 AGPLSNSRLVESLTPLILNI 198

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 52.9 bits (126), Expect = 1e-08
 Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 46/209 (22%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG--------QQTAKELGPNATFIA 86
           KVALITG     G   A   +  G +V     +             Q      P      
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 87  CDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV 146
            D++  S+++  +     +  Q D +YN   ++       V ++ E  +    ++  G +
Sbjct: 62  GDLSDTSNLTRIL-----REVQPDEVYNLGAMSH------VAVSFESPEYTADVDAMGTL 110

Query: 147 --------AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH---------TYSVSKSAI 189
                    G++  TR            T+ + GL+  + Q           Y+V+K   
Sbjct: 111 RLLEAIRFLGLEKKTRFYQA-------STSELYGLVQEIPQKETTPFYPRSPYAVAKLYA 163

Query: 190 IGLVKSMAAELCEYGIRINCISPFAIPTP 218
             +  +       YG+       F   +P
Sbjct: 164 YWITVNYRE---SYGMYACNGILFNHESP 189

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 2e-08
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 35/210 (16%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIAD----------IQHQLGQQTAKELGPNATF 84
            VALITG     G   A   +  G +V              I+H L +     +  N   
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH-LYKNPQAHIEGNMKL 60

Query: 85  IACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRG 144
              D+T  +              ++        +     +S V ++ ++ +    ++  G
Sbjct: 61  HYGDLTDSTC-----------LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVG 109

Query: 145 VVAGIKHSTRVMIPRRSGCILC-TASVTGLLGGLAQH---------TYSVSKSAIIGLVK 194
            +  +       +          T+ + G +  + Q           Y  +K     +V 
Sbjct: 110 TLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169

Query: 195 SMAAELCEYGIRINCISPFAIPTPFVMEEM 224
           +       Y +       F   +P      
Sbjct: 170 NFRE---AYNLFAVNGILFNHESPRRGANF 196

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 44/208 (21%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIA----DIQHQLGQQTAKELGPNATFIACDVTKES 93
           LITG A  IG A     I N    V+          L   +         F   D+   +
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV----AGI 149
           +++        +  Q D + + A  +       VD ++      +  N+ G         
Sbjct: 64  EITRIF-----EQYQPDAVMHLAAESH------VDRSITGPAAFIETNIVGTYALLEVAR 112

Query: 150 KHSTRVMIPRRSGCILCTASVTGLLGGLAQHT----------------------YSVSKS 187
           K+ + +   +++       S   + G L                          YS SK+
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172

Query: 188 AIIGLVKSMAAELCEYGIRINCISPFAI 215
           +   LV++       YG+     +    
Sbjct: 173 SSDHLVRAWRR---TYGLPTIVTNCSNN 197

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 23/182 (12%), Positives = 45/182 (24%), Gaps = 12/182 (6%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSD 97
            ITGA   I    A +    G  V+ +D       +   E      F   D+    +   
Sbjct: 19  SITGAGGFIASHIARRLKHEGHYVIASDW---KKNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 98  A---VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTR 154
               VD   +    +  M            +   ++  + +      ++        S  
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF--YASSAC 133

Query: 155 VMIPRRSGCILCTASVTGLLGGLAQHT-YSVSKSAIIGLVKSMAAELCEYGIRINCISPF 213
           +    +       +              + + K A   L K       ++GI        
Sbjct: 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNK---DFGIECRIGRFH 190

Query: 214 AI 215
            I
Sbjct: 191 NI 192

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.8 bits (107), Expect = 3e-06
 Identities = 26/198 (13%), Positives = 49/198 (24%), Gaps = 22/198 (11%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIAD---------IQHQLGQQTAKELGPNATFI 85
           K+ALITG     G       +  G +V               + +               
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 86  ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGV 145
             D+T  S +   +        + D +YN A  +            +    V+      +
Sbjct: 62  YADLTDASSLRRWI-----DVIKPDEVYNLAAQSHVAVS---FEIPDYTADVVATGALRL 113

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE--- 202
           +  ++  T             ++ + G        T      +     K  A        
Sbjct: 114 LEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 173

Query: 203 --YGIRINCISPFAIPTP 218
             YG+       F   +P
Sbjct: 174 EAYGLFACNGILFNHESP 191

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 45.7 bits (107), Expect = 3e-06
 Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 25/206 (12%)

Query: 38  LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKES 93
           L+TG +  IG  T  + + NG  V+I D      +     +    G + TF+  D+  E+
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV------- 146
            +++     I   + +D + + AG+        V  +++   +    NV G +       
Sbjct: 64  LMTE-----ILHDHAIDTVIHFAGL------KAVGESVQKPLEYYDNNVNGTLRLISAMR 112

Query: 147 -AGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
            A +K+          G       V     G  Q  Y  SK  +  ++  +  +  +   
Sbjct: 113 AANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL--QKAQPDW 170

Query: 206 RINCISPFAIPTPFVMEEMSQIYAGV 231
            I  +  F         +M +   G+
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGI 196

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.4 bits (106), Expect = 4e-06
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 15/190 (7%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT 90
           K+ L+TG A  IG  T  + I NG   V+AD        +   L      +  F   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 91  KESDVSDAVDFTISKHNQLDIMYNNAGVA-----CKTPRSIVDLNLEVFDQVMRINVRGV 145
               +       + K  ++D + + AG+       + P      N+     ++ +  +  
Sbjct: 62  DRKGLEK-----VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN 116

Query: 146 VAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGI 205
           V+    S+   +   +        +         + Y  +K AI  ++  +     +   
Sbjct: 117 VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNS-DKKSW 175

Query: 206 RINCISPFAI 215
           +   +  F  
Sbjct: 176 KFAILRYFNP 185

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 44.5 bits (103), Expect = 8e-06
 Identities = 9/91 (9%), Positives = 24/91 (26%), Gaps = 2/91 (2%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADI--QHQLGQQTAKELGPNATFIACDVTKE 92
           K   +TG     G   +    + GA V    +             +         D+  +
Sbjct: 9   KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 68

Query: 93  SDVSDAVDFTISKHNQLDIMYNNAGVACKTP 123
           + + +++     +            ++   P
Sbjct: 69  NKLLESIREFQPEIVFHMAAQPLVRLSYSEP 99

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKELG--PNATFIACDVTK 91
           + AL+TG     G   A   +  G +V     +     +   +ELG   +  +   D+  
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLN 130
              V  AV     +        +  G +   P +   ++
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVD 99

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 42.3 bits (98), Expect = 4e-05
 Identities = 41/270 (15%), Positives = 82/270 (30%), Gaps = 28/270 (10%)

Query: 38  LITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKE--LGPNATFIACDVTKES 93
           ++TG A  IG        +N     V + D     G +   E  LG     +  D+    
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAE 65

Query: 94  DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHST 153
            V        +  +      ++   +   P   +  N      ++    +  +     ST
Sbjct: 66  LVDKLAAKADAIVHY--AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 154 RVMIPRRSGCILCTASVTGLLGGLAQHT-------YSVSKSAIIGLVKSMAAELCEYGIR 206
             +               G        T       YS +K+A   +VK+       +G++
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR---SFGVK 180

Query: 207 I------NCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA 260
                  N   P+     F+  +++ I AG+        +Y  G         ND  +  
Sbjct: 181 ATISNCSNNYGPYQHIEKFIPRQITNILAGIK-----PKLYGEGKNVRDWIHTNDH-STG 234

Query: 261 LYLASDDAKYVSGHNLVVDGGFTSFKNLKL 290
           ++      +    + +  DG   + + L+L
Sbjct: 235 VWAILTKGRMGETYLIGADGEKNNKEVLEL 264

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 10/121 (8%)

Query: 31  KLEEKVALITGAASGIGKATAAKFISNGAKVVIADI--------QHQLGQQTAKELGPNA 82
             + KV LITG A  IG       +    KVV  D           ++    +++   N 
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 83  TFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINV 142
            FI  D+    D ++        +        +   +   P +    N++ F  ++    
Sbjct: 73  KFIQGDIRNLDDCNN--ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130

Query: 143 R 143
            
Sbjct: 131 D 131

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 26/190 (13%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           K  LITG A  +G     K + +G +V + D          + +         ++     
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVD---NFFTGRKRNVEHWIGHENFELINH-- 56

Query: 95  VSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVV----AGIK 150
                D     + ++D +Y+ A  A   P  + +       + ++ N  G +       +
Sbjct: 57  -----DVVEPLYIEVDQIYHLASPA-SPPNYMYN-----PIKTLKTNTIGTLNMLGLAKR 105

Query: 151 HSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCE-----YGI 205
              R+++   +  +     V         H   +   A     K +A  +C       G+
Sbjct: 106 VGARLLLA-STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 164

Query: 206 RINCISPFAI 215
            +     F  
Sbjct: 165 EVRVARIFNT 174

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 30/199 (15%), Positives = 62/199 (31%), Gaps = 46/199 (23%)

Query: 29  SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACD 88
           +++   +V  I G    +G A   +    G   ++   + +L                 +
Sbjct: 1   AKQ---RV-FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-----------------N 39

Query: 89  VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAG 148
           +     V D          ++D +Y  A        +            +  N+      
Sbjct: 40  LLDSRAVHDFF-----ASERIDQVYLAAAKVGGIVANNTY-----PADFIYQNMMIESNI 89

Query: 149 IKHSTRVMIPR----RSGCILCTASV-----TGLLGGLAQHT---YSVSKSAIIGLVKSM 196
           I  + +  + +     S CI    +      + LL G  + T   Y+++K A I L +S 
Sbjct: 90  IHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESY 149

Query: 197 AAELCEYGIRINCISPFAI 215
                +YG     + P  +
Sbjct: 150 NR---QYGRDYRSVMPTNL 165

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 40.5 bits (93), Expect = 1e-04
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 4/101 (3%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---PNATFIACDVTK 91
           K+ LITG    +G   A+  +S G  +++ D   + G            N  F+  D+  
Sbjct: 2   KL-LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 92  ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLE 132
           ++DV+  +   +               +   P    ++N+ 
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVG 101

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 2e-04
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 16/208 (7%)

Query: 34  EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG----------QQTAKELGPNAT 83
           EKV L+TG A  IG  T  + +  G   V+ D  H             ++  +  G +  
Sbjct: 3   EKV-LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 84  FIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVR 143
           F   D+  +  +                     G + + P     +NL    Q++ I   
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 144 GVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEY 203
               G+K+          G             G   + Y  SK  I  +++ +     + 
Sbjct: 122 H---GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DK 176

Query: 204 GIRINCISPFAIPTPFVMEEMSQIYAGV 231
                 +  F          + +   G+
Sbjct: 177 TWNAVLLRYFNPTGAHASGCIGEDPQGI 204

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (90), Expect = 3e-04
 Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 2/81 (2%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESD 94
           +V LI G    IG     + +      V                 P+  F+  D++  S+
Sbjct: 2   RV-LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH-PHFHFVEGDISIHSE 59

Query: 95  VSDAVDFTISKHNQLDIMYNN 115
             +           L  +   
Sbjct: 60  WIEYHVKKCDVVLPLVAIATP 80

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.2 bits (89), Expect = 4e-04
 Identities = 11/92 (11%), Positives = 21/92 (22%), Gaps = 20/92 (21%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVIAD--------------------IQHQLGQQT 74
              ++ G     G ATA        +V I D                      H    + 
Sbjct: 2   SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61

Query: 75  AKELGPNATFIACDVTKESDVSDAVDFTISKH 106
               G +      D+     ++++        
Sbjct: 62  KALTGKSIELYVGDICDFEFLAESFKSFEPDS 93

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 38.6 bits (88), Expect = 5e-04
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 35  KVALITGAASGIGKATAAKFISNGAKVVI-----ADIQHQLGQQTAKELGPNATFIACDV 89
            + L+TGA   +      + + +G KV       + + +   +  AK  G   T +  D+
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 90  TKESDVSDAVDFTISKHNQLDIMYNN 115
            K+    + +       +   ++  +
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVSFS 97

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVT 90
          ++K   + GA    G +      + G  V      H L    A+EL   PN T     + 
Sbjct: 2  QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQV--HSLKGLIAEELQAIPNVTLFQGPLL 59

Query: 91 KESDVSDAV 99
              + D +
Sbjct: 60 NNVPLMDTL 68

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 38 LITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIAC 87
          L+TGA+   G+    K      K V   +      Q  +++G  A     
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS--AQGKEKIGGEADVFIG 54

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	297
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.9
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.83
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.83
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.8
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.8
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.79
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.78
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.77
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.76
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.76
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.75
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.7
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.69
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.68
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.63
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.53
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.47
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.44
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.43
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.4
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.32
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.24
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.89
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.04
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.03
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.03
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.01
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.96
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.95
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.84
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.79
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.77
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.72
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.71
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.66
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.52
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.5
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.5
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.47
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.38
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.24
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.23
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.2
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.18
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.15
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.14
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.13
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.12
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.08
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.03
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.02
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.02
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.99
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.97
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.95
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.88
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.81
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.77
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.74
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.64
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.61
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.61
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.6
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.52
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.49
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.44
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.4
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.38
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.37
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.36
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.34
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.21
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.19
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.18
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.17
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.14
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.13
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.09
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.09
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.01
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.97
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.94
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.91
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.78
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.78
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.76
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.75
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.74
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.74
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.72
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.66
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.63
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.63
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.55
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.53
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.44
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.43
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.42
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.39
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.38
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.36
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.28
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.2
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.15
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.03
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.95
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.94
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.85
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.79
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.76
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.63
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.47
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.31
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.29
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.24
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.17
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.1
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.9
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.89
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.87
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.62
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.62
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.61
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.39
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.2
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.19
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.15
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.13
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.11
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.02
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.95
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.93
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.91
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.82
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.68
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.52
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.5
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.49
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.46
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.41
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	92.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.01
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.87
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.86
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.84
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.44
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.35
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.24
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.81
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.6
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.53
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.37
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.17
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.05
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	89.98
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.96
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.86
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.78
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.6
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.57
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.39
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.26
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	89.15
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.13
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	88.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.46
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.41
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.28
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.24
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.19
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.18
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	88.13
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.09
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	87.9
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.77
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.53
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.46
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.29
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.05
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.87
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	86.68
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.43
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.37
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.05
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	86.03
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.99
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.95
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	85.9
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.79
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.73
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.11
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.09
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.82
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	84.77
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.94
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.76
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	83.46
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.44
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	83.15
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	83.07
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	82.96
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	82.82
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.71
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	82.63
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	82.54
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.26
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.17
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.89
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.75
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	81.71
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	81.56
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	81.25
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.24
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	81.23
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	81.14
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	81.04

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-56  Score=380.22  Aligned_cols=242  Identities=30%  Similarity=0.461  Sum_probs=224.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.+++..++++.+...+.+|++|+++++++++++.+++|++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            68999999999999999999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+...+|++||+|++
T Consensus        81 ilVnnAg~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~  158 (243)
T d1q7ba_          81 ILVNNAGIT--RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLI  158 (243)
T ss_dssp             EEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             eehhhhhhc--cccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence            999999987  667799999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      +|+++++.|++++|||||+|+||+++|++.+...+        + ..+......|. +|+++|||+|+++.||+++.+.|
T Consensus       159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--------~-~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         159 GFSKSLAREVASRGITVNVVAPGFIETDMTRALSD--------D-QRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAY  228 (243)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--------H-HHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhCccCeEEEEEecceEechhhhhhhh--------h-HHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999998765422        1 22333444555 99999999999999999999999


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      +|||+|.+|||+++
T Consensus       229 itGq~i~vdGG~~~  242 (243)
T d1q7ba_         229 ITGETLHVNGGMYM  242 (243)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             CcCCeEEECCCeEe
Confidence            99999999999876

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.3e-55  Score=378.91  Aligned_cols=253  Identities=32%  Similarity=0.459  Sum_probs=229.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |+|+||+++||||++|||+++|++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+++|++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |+||||||..  ..+++.+.+.++|++.+++|+.+++.+++++.|.|.+ ++.|+||++||..+..+.+.+.+|++||+|
T Consensus        81 DilVnnAg~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (256)
T d1k2wa_          81 DILVNNAALF--DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAA  158 (256)
T ss_dssp             CEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             cEEEeecccc--cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhH
Confidence            9999999987  5677999999999999999999999999999998654 457999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +++|++.++.|++++|||||+|+||+++|+++......  .......++.........|+ +|+++|+|+|+++.||+++
T Consensus       159 l~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~p~evA~~v~fL~S~  237 (256)
T d1k2wa_         159 VISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLATP  237 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCHHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998766443  12233334444445555666 9999999999999999999


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+.|+|||+|.+|||.++.
T Consensus       238 ~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         238 EADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GGTTCCSCEEEESTTSSCC
T ss_pred             hhCCccCceEEECcchhhC
Confidence            9999999999999998763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.7e-55  Score=378.66  Aligned_cols=251  Identities=32%  Similarity=0.498  Sum_probs=226.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999888776654     457889999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.+++++.|.|++++.|+||++||..+..+.+...+|+++
T Consensus        81 ~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCC-CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCcccc-cCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            999999999999763 4456888999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+|+.+|+++++.|++++|||||+|+||+++|+|........... ..++..+......|+ +|+++|+|+|++++||++
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fL~S  237 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-NPRKAAEEFIQVNPS-KRYGEAPEIAAVVAFLLS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-CHHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcc-cHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999988776543332 334444445555566 999999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.+.|+|||+|.||||++.
T Consensus       238 ~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         238 DDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhcCCcCceEEcCcchhc
Confidence            9999999999999999974

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-55  Score=376.28  Aligned_cols=245  Identities=29%  Similarity=0.440  Sum_probs=220.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++++|++|+++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3799999999999999999999999999999999999998887766554    678899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  184 (297)
                      +|++|+||||||..  ..+++.+.+.++|++.+++|+.+++.++|+++|+|++++.|++|+++|..+. .+.+.+.+|++
T Consensus        81 ~g~iDiLVnnAG~~--~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 FGKLDTVVNAAGIN--RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCCC--CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            99999999999987  6678999999999999999999999999999999999889999999998764 46677889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|+|++.|+++++.|++++|||||+|+||+++|++.+....       .++..+......|+ +|+++|||+|+++.||+
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~  230 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-------DPEKLDYMLKRIPL-GRTGVPEDLKGVAVFLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-------CHHHHHHHHHTCTT-SSCBCGGGGHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC-------CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999876542       12223333444555 99999999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~  284 (297)
                      ++.+.|+|||+|.+|||++.
T Consensus       231 S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         231 SEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhCCCcCcEEEeCcCeeC
Confidence            99999999999999999973

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.2e-54  Score=375.02  Aligned_cols=251  Identities=24%  Similarity=0.348  Sum_probs=225.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999988887766   5678899999999999999999999998


Q ss_pred             C-CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          107 N-QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      + ++|++|||||..  ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++
T Consensus        84 ~~~idilvnnAG~~--~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  161 (259)
T d2ae2a_          84 HGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  161 (259)
T ss_dssp             TTCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCceEEEECCcee--ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence            6 899999999987  6677899999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |++++.|+|+++.|++++|||||+|+||+|+|++.+......    ..++.........|+ +|+++|+|+|++++||++
T Consensus       162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~pl-~R~g~pedvA~~v~fL~S  236 (259)
T d2ae2a_         162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP----EQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCF  236 (259)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH----HHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhch----hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999876543211    112222333344555 999999999999999999


Q ss_pred             CCCCcccccEEEecCCcccccC
Q 022418          266 DDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      +.+.|+|||+|.+|||++...+
T Consensus       237 ~~s~~itG~~i~VDGG~~a~~G  258 (259)
T d2ae2a_         237 PAASYVTGQIIYVDGGLMANCG  258 (259)
T ss_dssp             GGGTTCCSCEEEESTTGGGCSC
T ss_pred             chhCCCcCcEEEECCCeEeeCC
Confidence            9999999999999999987655

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=8.2e-55  Score=373.43  Aligned_cols=244  Identities=31%  Similarity=0.423  Sum_probs=210.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++ ..++..++.+.++.++++|++|+++++++++++.+++|++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999874 4455566678889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|++||..+..+.+...+|++||+|+
T Consensus        82 DilVnnAG~~--~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (247)
T d2ew8a1          82 DILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN  159 (247)
T ss_dssp             CEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCC--CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccH
Confidence            9999999987  67789999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      ++|+++++.|++++|||||+|+||+++|++.+......       ..........+. +|+++|||+|++++||+++.+.
T Consensus       160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-------~~~~~~~~~~~l-~r~~~pedvA~~v~fL~S~~s~  231 (247)
T d2ew8a1         160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-------MFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDDAS  231 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC-------------------------CTTSSS-CSCCCTHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch-------hHHHHHHHhccC-CCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999886543211       111111222234 8899999999999999999999


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      |+|||+|.+|||++.
T Consensus       232 ~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         232 FITGQTLAVDGGMVR  246 (247)
T ss_dssp             TCCSCEEEESSSCCC
T ss_pred             CCcCCeEEECCCEec
Confidence            999999999999875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.5e-55  Score=374.16  Aligned_cols=243  Identities=29%  Similarity=0.476  Sum_probs=219.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999988887766   567899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      +|++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+...+|++|
T Consensus        85 ~g~iDilvnnag~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (251)
T d2c07a1          85 HKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  162 (251)
T ss_dssp             CSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCceeeeeccccc--cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence            99999999999987  5667889999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+|+++|+|+++.|++++|||||+|+||+++|+|....         .++..+......|+ +|+++|+|+|+++.||++
T Consensus       163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---------~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S  232 (251)
T d2c07a1         163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---------SEQIKKNIISNIPA-GRMGTPEEVANLACFLSS  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---------CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999987643         22333344445555 999999999999999999


Q ss_pred             CCCCcccccEEEecCCcc
Q 022418          266 DDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~  283 (297)
                      +.+.|+|||+|.+|||++
T Consensus       233 ~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         233 DKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             GGGTTCCSCEEEESTTSC
T ss_pred             chhCCCcCcEEEECCCcC
Confidence            999999999999999975

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.3e-54  Score=374.64  Aligned_cols=249  Identities=27%  Similarity=0.404  Sum_probs=225.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+++|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999999999999888877665   66899999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhc--cCCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVM--IPRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      +||||||..  ...++.+++.++|++.+++|+.+++.++++++|++  .+++.|++|+++|..+..+.+.+.+|++||+|
T Consensus        82 ilVnnAG~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          82 VLVNNAGRP--GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             EEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEeccccc--CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence            999999987  56779999999999999999999999999999974  45667999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH--hhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ--IYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      +.+|+|+++.|++++|||||+|+||+|+|+|.....+.  .......++..+......|+ +|+++|+|+|+++.||+++
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-gR~~~pedia~~v~fL~S~  238 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP  238 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998776543  22334455555555666666 9999999999999999999


Q ss_pred             CCCcccccEEEecCCcccc
Q 022418          267 DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+.|+|||+|.+|||++.+
T Consensus       239 ~s~~itG~~i~vDGG~~~~  257 (257)
T d2rhca1         239 GAAAVTAQALNVCGGLGNY  257 (257)
T ss_dssp             GGTTCCSCEEEESTTCCCC
T ss_pred             hhcCCcCceEEECcCcccC
Confidence            9999999999999998753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.9e-54  Score=373.80  Aligned_cols=248  Identities=32%  Similarity=0.469  Sum_probs=220.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++   +.++..+++|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999864 455554443   678899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc-eEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      +|++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+..+.+.+.+|++
T Consensus        83 ~G~iDiLVnnAG~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~a  160 (261)
T d1geea_          83 FGKLDVMINNAGLE--NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCEeeccceec--CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccccc
Confidence            99999999999987  56779999999999999999999999999999999876654 5889999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||+|++.|+++++.|++++|||||+|+||+|+|++......       .++.........|+ +|+++|||+|++++||+
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~-------~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~  232 (261)
T d1geea_         161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA-------DPEQRADVESMIPM-GYIGEPEEIAAVAAWLA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH-------SHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcC-------CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999876542       12223334444555 99999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++.+.|+|||+|.+|||++++.+
T Consensus       233 S~~s~~itG~~i~vDGG~sl~p~  255 (261)
T d1geea_         233 SSEASYVTGITLFADGGMTLYPS  255 (261)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCGG
T ss_pred             CchhcCCcCCeEEECCCeeCCCC
Confidence            99999999999999999998754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-54  Score=373.67  Aligned_cols=246  Identities=34%  Similarity=0.486  Sum_probs=222.5

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ...|+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++++++++++++++.
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999999888877666   6789999999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++|++|+||||||..  ...++ +.+.++|++.+++|+.+++.+++++.|+|++++.+++|++||..+..+.+.+.+|+
T Consensus        84 ~~~g~iDilvnnAG~~--~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          84 SKLGKVDILVNNAGGG--GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HHHSSCCEEEECCCCC--CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHcCCCCEeeeCCcCC--CCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccch
Confidence            9999999999999987  44444 78999999999999999999999999999998899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||+|+++|+|+++.|++++|||||+|+||+|+|++.....       . ++..+......|+ +|+++|+|+|+++.||
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-------~-~e~~~~~~~~~pl-~R~g~pedvA~~v~fL  231 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-------T-PEIEQKMLQHTPI-RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-------C-HHHHHHHHHTCSS-CSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-------C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876443       1 2223334445555 9999999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++.+.|+|||+|.+|||...
T Consensus       232 ~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCchhcCCcCCEEEECcCccc
Confidence            999999999999999999854

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.1e-54  Score=375.73  Aligned_cols=250  Identities=29%  Similarity=0.446  Sum_probs=212.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++    +.++.++++|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999975 4555554433    6789999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|+||||||..  ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.+.+|++||
T Consensus        82 G~iDiLVnnAG~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccc--cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence            9999999999987  56779999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC--C-HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV--D-ASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +++++|++.++.|++++||+||+|+||+|+|+|............  . .+...+......|. +|+++|+|+|+++.||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL  238 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999876654322111  1 11222223344555 9999999999999999


Q ss_pred             hcCCCCcccccEEEecCCccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++.+.|+|||+|.+|||++.
T Consensus       239 ~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhCCCcCCEEEECcchhc
Confidence            999999999999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.6e-54  Score=370.19  Aligned_cols=246  Identities=30%  Similarity=0.458  Sum_probs=217.1

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .++||++|||||++|||+++|++|+++|++|++++|+++..+ ..++.+  ..++++|++|+++++++++++.+++|+||
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            379999999999999999999999999999999999987644 444443  46789999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||+++|..+..+.+...+|+++|++++
T Consensus        79 iLVnnAG~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  156 (248)
T d2d1ya1          79 VLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLV  156 (248)
T ss_dssp             EEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHH
T ss_pred             eEEEeCcCC--CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHH
Confidence            999999987  567899999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      .|++.++.|++++|||||+|+||+++|++........   ...+...+......|+ +|+++|+|+|+.+.||+++.+.|
T Consensus       157 ~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~  232 (248)
T d2d1ya1         157 NLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS---PDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASF  232 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-----------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcC---CCHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999999887654221   1222333334444555 99999999999999999999999


Q ss_pred             ccccEEEecCCcccc
Q 022418          271 VSGHNLVVDGGFTSF  285 (297)
Q Consensus       271 ~tG~~i~vdgG~~~~  285 (297)
                      +|||+|.+|||++.+
T Consensus       233 itG~~i~vDGG~tas  247 (248)
T d2d1ya1         233 ITGAILPVDGGMTAS  247 (248)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCcEEEcCcCcccc
Confidence            999999999999754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.3e-54  Score=370.89  Aligned_cols=239  Identities=35%  Similarity=0.551  Sum_probs=222.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ..|+||+++||||++|||+++|++|+++|++|++++|+++++++..++++.+..++++|++|+++++++++++.+++|++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46999999999999999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ..+++.+.+.++|++.+++|+.+++.+++.+.|.|++++.|+||++||..+..+.+.+.+|+++|+++
T Consensus        82 dilinnAG~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  159 (244)
T d1nffa_          82 HVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV  159 (244)
T ss_dssp             CEEEECCCCC--CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCccc--CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHH
Confidence            9999999987  66779999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      ++|+|.++.|++++|||||+|+||+++|+|.....+.              ....++ +|+++|+|+|+++.||+++.+.
T Consensus       160 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------------~~~~pl-~R~~~p~diA~~v~fL~s~~s~  224 (244)
T d1nffa_         160 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED--------------IFQTAL-GRAAEPVEVSNLVVYLASDESS  224 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT--------------CSCCSS-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH--------------HHhccc-cCCCCHHHHHHHHHHHhChhhC
Confidence            9999999999999999999999999999987543211              112334 8999999999999999999999


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      |+|||+|.+|||++..
T Consensus       225 ~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         225 YSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCcCCEEEECCCeecc
Confidence            9999999999999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.9e-54  Score=366.43  Aligned_cols=241  Identities=32%  Similarity=0.487  Sum_probs=217.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++  +.+++.||++|+++++++++++.+++|++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            6799999999999999999999999999999999999999998888765  46789999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||+.  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+.++++|| .+..+.+...+|++||+|+
T Consensus        79 DilVnnAG~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal  155 (242)
T d1ulsa_          79 DGVVHYAGIT--RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGV  155 (242)
T ss_dssp             CEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHH
T ss_pred             eEEEECCccc--ccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHH
Confidence            9999999987  567799999999999999999999999999999999888777777776 5677888899999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|+++++.|++++|||||+|+||+|+|++....         .+...+......|+ +|+.+|+|+|+++.||+++.+.
T Consensus       156 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---------~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~  225 (242)
T d1ulsa_         156 VGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---------PEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESS  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---------CHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---------CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhchhhC
Confidence            9999999999999999999999999999987643         22333344455555 8999999999999999999999


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      |+|||+|.+|||+++.
T Consensus       226 ~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         226 FITGQVLFVDGGRTIG  241 (242)
T ss_dssp             TCCSCEEEESTTTTTT
T ss_pred             CCCCcEEEECCCccCC
Confidence            9999999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-54  Score=373.97  Aligned_cols=247  Identities=25%  Similarity=0.393  Sum_probs=197.0

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +-++|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.++.||++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999988887765   56789999999999999999999999


Q ss_pred             Hc-CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          105 KH-NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       105 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      ++ |++|++|||||..  ...++.+.+.++|++.+++|+.+++.+++++.|.|++++.|+||++||..+..+.+...+|+
T Consensus        82 ~~~g~idilvnnAG~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  159 (259)
T d1xq1a_          82 MFGGKLDILINNLGAI--RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  159 (259)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HhCCCccccccccccc--CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccc
Confidence            98 6899999999987  56778999999999999999999999999999999988899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++|+|++.|+++++.|++++|||||+|+||+|+|++.......        +..+......|+ +|+++|||+|++++||
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~--------~~~~~~~~~~pl-~R~~~pedvA~~v~fL  230 (259)
T d1xq1a_         160 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD--------EFKKVVISRKPL-GRFGEPEEVSSLVAFL  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHH
T ss_pred             ccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH--------HHHHHHHhCCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998654322        122223333445 8999999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.|+|||+|.+|||+++.
T Consensus       231 ~S~~s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         231 CMPAASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             TSGGGTTCCSCEEECCCCEEET
T ss_pred             hCchhcCCcCcEEEeCCCEECC
Confidence            9999999999999999999875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.5e-53  Score=370.05  Aligned_cols=251  Identities=47%  Similarity=0.778  Sum_probs=223.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC--CCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG--PNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.  ..+.++.||++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999999999999999888873  45788999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCc-cchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQH-TYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~  187 (297)
                      +|++|||||.....+..+.+.+.++|++.+++|+.+++.++|+++|+|.+++.|++|+++|..+..+.++.. .|++||+
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            999999999875444457789999999999999999999999999999998899999999999988766654 7999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      |++.|++.++.|++++|||||+|+||+++|++..+....     ..+...........+.+|+++|||+|++++||+++.
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~  237 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-----DSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE  237 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-----CHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC-----CHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999987654321     233333333344445589999999999999999999


Q ss_pred             CCcccccEEEecCCccccc
Q 022418          268 AKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~~  286 (297)
                      +.|+|||+|.+|||++...
T Consensus       238 s~~itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         238 SKYVSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             GTTCCSCEEEESTTGGGCC
T ss_pred             hCCccCceEEECcCcccCC
Confidence            9999999999999998764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=8.2e-54  Score=368.01  Aligned_cols=243  Identities=33%  Similarity=0.522  Sum_probs=218.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++  +.++.++.+|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999999999999888877  357899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCc-eEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSG-CILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|+||||||..  ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.| ++|++||..+..+.+...+|+++|+
T Consensus        83 iDiLVnnAg~~--~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          83 VSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ceEEEeccccc--cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            99999999987  66789999999999999999999999999999999887754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          188 AIIGLVKSMAAE--LCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       188 a~~~~~~~la~e--l~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      ++.+|++.++.|  +.++|||||+|+||+|+|++......       .+. ........|+ +|+++|||+|++++||++
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~-~~~~~~~~pl-~R~~~pedvA~~v~fL~S  231 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-------AEE-AMSQRTKTPM-GHIGEPNDIAYICVYLAS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-------HHH-HHTSTTTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-------HHH-HHHHHhCCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999998  56889999999999999998765431       111 1112223444 899999999999999999


Q ss_pred             CCCCcccccEEEecCCccc
Q 022418          266 DDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~  284 (297)
                      +.+.|+|||+|.+|||++.
T Consensus       232 ~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         232 NESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhCCCcCcEEEECccccc
Confidence            9999999999999999874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.9e-54  Score=372.10  Aligned_cols=243  Identities=35%  Similarity=0.489  Sum_probs=222.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++.++++|++++++++++++++.+++|++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            68999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+...+|++||+|++
T Consensus        82 ilVnnAg~~--~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~  159 (254)
T d1hdca_          82 GLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVR  159 (254)
T ss_dssp             EEEECCCCC--CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecCccc--cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHH
Confidence            999999987  667799999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhcCCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC-EPNDIANAALYLASDDAK  269 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dia~~~~~l~~~~~~  269 (297)
                      +|++.++.|++++|||||+|+||+|+|++..+.......         ......++ +|+. +|+|+|++++||+++.+.
T Consensus       160 ~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~---------~~~~~~pl-~R~g~~PedvA~~v~fL~S~~a~  229 (254)
T d1hdca_         160 GLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE---------GNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST---------TSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH---------HHHhCCCC-CCCCCCHHHHHHHHHHHhchhhC
Confidence            999999999999999999999999999988654322111         11123344 7776 699999999999999999


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      |+|||+|.+|||++..
T Consensus       230 ~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         230 YVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TCCSCEEEESTTTTTS
T ss_pred             CCCCceEEeCCCccCC
Confidence            9999999999999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-54  Score=367.95  Aligned_cols=248  Identities=32%  Similarity=0.503  Sum_probs=219.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++ .++.++.||++|+++++++++++.+++|++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-CCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3689999999999999999999999999999999999999999888876 457889999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||... ...++.+.+.++|++.+++|+.+++.++++++|+|+++ +|++|++||..+..+.+...+|+++|+|+
T Consensus        81 DilVnnAG~~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal  158 (250)
T d1ydea1          81 DCVVNNAGHHP-PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAV  158 (250)
T ss_dssp             CEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEecccccc-cccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhH
Confidence            99999999763 34567889999999999999999999999999999754 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|+++++.|++++|||||+|+||+|+|+|++......   ..............|+ +|+++|+|+|+++.||+++ +.
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~pl-~R~g~p~eva~~v~fL~Sd-a~  233 (250)
T d1ydea1         159 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-AN  233 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC---CCHHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCc-cC
Confidence            99999999999999999999999999999886553221   1122222333334455 9999999999999999987 78


Q ss_pred             cccccEEEecCCcccc
Q 022418          270 YVSGHNLVVDGGFTSF  285 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~~  285 (297)
                      |+|||+|.+|||+++.
T Consensus       234 ~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         234 FCTGIELLVTGGAELG  249 (250)
T ss_dssp             TCCSCEEEESTTTTSC
T ss_pred             CCcCCeEEECCCcccC
Confidence            9999999999999863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=7.6e-54  Score=370.16  Aligned_cols=249  Identities=31%  Similarity=0.494  Sum_probs=224.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++..+.||++|+++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999999999888877666   56789999999999999999999999999


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ++|++|||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.|++|++||..+..+.+.+.+|++||+
T Consensus        82 ~iDilVnnaG~~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          82 KIDFLFNNAGYQG-AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             CCCEEEECCCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCeehhhhcccc-ccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            9999999999763 345788999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHh-------hcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQI-------YAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      |+++|++.++.|++++|||||+|+||+|+|++..+.....       ......+...+......|+ +|+++|+|+|+++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~v  239 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPGVV  239 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999886543321       1223344455555556666 9999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCC
Q 022418          261 LYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      .||+++.+.|+|||+|.||||
T Consensus       240 ~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         240 AFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHhCchhcCccCCeEEeCCC
Confidence            999999999999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.6e-53  Score=365.91  Aligned_cols=248  Identities=35%  Similarity=0.505  Sum_probs=220.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .|++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.+++||++|+++++++++++.+++|++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            478999999999999999999999999999999999988877665   67899999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEecccccccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      +||||||+.  ...++.+.+.++|++.+++|+.++++++++++|+|.++ ..++++++||..+..+.+.+..|++||+|+
T Consensus        81 ilVnnAG~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (255)
T d1gega_          81 VIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  158 (255)
T ss_dssp             EEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEeccccc--ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHH
Confidence            999999987  66789999999999999999999999999999987655 468899999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh--cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY--AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ++|+++++.|++++|||||+|+||+++|+++........  .....+..........|+ +|+++|+|+|++++||+++.
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999876644311  122223333334445555 99999999999999999999


Q ss_pred             CCcccccEEEecCCccc
Q 022418          268 AKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~  284 (297)
                      +.|+|||+|.+|||+.+
T Consensus       238 a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             hCCccCcEEEecCCEEe
Confidence            99999999999999864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-53  Score=362.43  Aligned_cols=235  Identities=26%  Similarity=0.392  Sum_probs=206.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+        .++..+++|++|+++++++++++.+++|++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------cCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            369999999999999999999999999999999999998653        356789999999999999999999999999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAI  189 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  189 (297)
                      |+||||||..  ..+++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+.+...+|++||+|+
T Consensus        75 DiLVnnAG~~--~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  152 (237)
T d1uzma1          75 EVLVSNAGLS--ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV  152 (237)
T ss_dssp             SEEEEECSCC--C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHH
T ss_pred             eEEEeeeccc--ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHH
Confidence            9999999987  66779999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      +.|++.++.|++++|||||+|+||+++|++.+..         .+...+......|. +|+++|||+|+++.||+++++.
T Consensus       153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---------~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~  222 (237)
T d1uzma1         153 IGMARSIARELSKANVTANVVAPGYIDTDMTRAL---------DERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDAS  222 (237)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---------CHHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999987643         22233334445555 9999999999999999999999


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      |+|||+|.+|||+++
T Consensus       223 ~itG~~i~vdGG~~m  237 (237)
T d1uzma1         223 YISGAVIPVDGGMGM  237 (237)
T ss_dssp             TCCSCEEEESTTTTC
T ss_pred             CCcCCeEEECCCCCC
Confidence            999999999999864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-53  Score=371.00  Aligned_cols=256  Identities=24%  Similarity=0.408  Sum_probs=221.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++      +.++.++.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988887765      23688999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++|++|++|||||..........+.+.++|++.+++|+.+++.+++++.|+|++++.++++++||..+..+.+.+.+|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999997643444556678999999999999999999999999999888899999999898889899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHH---HhcCCCCCCCCCHHHHHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELV---YSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +|+|+++|+|+++.|++++|||||+|+||+|+|++.........   ..+...+..   ....|+ +|+++|+|+|++++
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~~~~~iPl-gR~g~pediA~~v~  236 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPET---ASDKLYSFIGSRKECIPV-GHCGKPEEIANIIV  236 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHH---HHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccch---hhHHHHHHHHHHHcCCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999998765421111   111122222   222344 99999999999999


Q ss_pred             HHhcC-CCCcccccEEEecCCcccccCCCC
Q 022418          262 YLASD-DAKYVSGHNLVVDGGFTSFKNLKL  290 (297)
Q Consensus       262 ~l~~~-~~~~~tG~~i~vdgG~~~~~~~~~  290 (297)
                      ||+++ .+.|+|||+|.+|||+++..++.-
T Consensus       237 fL~S~d~s~~itG~~i~vDGG~~l~~g~~~  266 (274)
T d1xhla_         237 FLADRNLSSYIIGQSIVADGGSTLVMGMQT  266 (274)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred             HHcCCccccCccCcEEEeCcCHHHhcCCCc
Confidence            99985 589999999999999999877643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.3e-53  Score=362.60  Aligned_cols=238  Identities=29%  Similarity=0.507  Sum_probs=214.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADI-QHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++|||||++|||+++|++|+++|++|++.++ +.+.+++..+++   +.++.++++|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999998754 555666655544   67889999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+...+|++||+|++
T Consensus        82 iLVnnAg~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccc--cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            999999987  667799999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-cCCCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA-SDDAK  269 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~-~~~~~  269 (297)
                      +|++.++.|++++|||||+|+||+++|++.....         ++..+......|. +|+++|+|+|+++.||+ ++.+.
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~~~pl-~R~~~p~dvA~~v~fLa~S~~a~  229 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAAS  229 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGGG
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHhh---------HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHHCCchhc
Confidence            9999999999999999999999999999876432         2233344445555 99999999999999996 89999


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      |+|||+|.+|||+++
T Consensus       230 ~itG~~i~vdGG~si  244 (244)
T d1edoa_         230 YITGQAFTIDGGIAI  244 (244)
T ss_dssp             GCCSCEEEESTTTTC
T ss_pred             CCcCCeEEeCCCeeC
Confidence            999999999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-52  Score=358.57  Aligned_cols=240  Identities=27%  Similarity=0.341  Sum_probs=214.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .+..+.+|++|+++++++++    ++|++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~----~~g~i   75 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKALG----GIGPV   75 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHH----HcCCC
Confidence            68999999999999999999999999999999999999999998888764 57889999999998877664    67999


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccchhhHHH
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKSA  188 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  188 (297)
                      |+||||||..  ..+++.+.+.++|++.+++|+.+++.+++.+.|.|. ++..|++|+++|..+..+.+...+|+++|+|
T Consensus        76 DilVnnAg~~--~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  153 (242)
T d1cyda_          76 DLLVNNAALV--IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA  153 (242)
T ss_dssp             SEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             eEEEECCccc--cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHH
Confidence            9999999987  567899999999999999999999999999999865 4457999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ++.|+|.++.|++++|||||+|+||+++|++.+....       .++.........|+ +|+++|||+|+++.||+++.+
T Consensus       154 l~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~-------~~~~~~~~~~~~pl-~R~~~peeva~~v~fL~S~~s  225 (242)
T d1cyda_         154 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-------DPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS  225 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-------CHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC-------CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999998765431       22333344445555 999999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .|+|||+|.+|||++-
T Consensus       226 ~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         226 ASTSGGGILVDAGYLA  241 (242)
T ss_dssp             TTCCSSEEEESTTGGG
T ss_pred             cCcCCceEEeCcchhc
Confidence            9999999999999874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.6e-53  Score=364.28  Aligned_cols=246  Identities=32%  Similarity=0.466  Sum_probs=218.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++.+..++++|++|+++++++++++.+++|++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||..  ...++.+.+.++|++.+++|+.+++.++++++|+|+++ .|+||++||..+..+.+...+|++||+|++
T Consensus        83 ilVnnAG~~--~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (253)
T d1hxha_          83 VLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCC--CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             eEEeccccc--CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHH
Confidence            999999987  56778999999999999999999999999999999754 599999999999999999999999999999


Q ss_pred             HHHHHHHHHHcc--CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELCE--YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .|+++++.|+++  +|||||+|+||+|+|++.....+..   .. ++......... +.+|+++|||+|++++||+++.+
T Consensus       160 ~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~---~~-~~~~~~~~~~~-~~gr~~~pedvA~~v~fL~S~~s  234 (253)
T d1hxha_         160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VS-KEMVLHDPKLN-RAGRAYMPERIAQLVLFLASDES  234 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CC-HHHHBCBTTTB-TTCCEECHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch---hh-HHHHHhCcccc-ccCCCCCHHHHHHHHHHHhChhh
Confidence            999999999987  4699999999999999876543221   11 11111111112 23789999999999999999999


Q ss_pred             CcccccEEEecCCccc
Q 022418          269 KYVSGHNLVVDGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~vdgG~~~  284 (297)
                      .|+|||+|.+|||+.-
T Consensus       235 ~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         235 SVMSGSELHADNSILG  250 (253)
T ss_dssp             TTCCSCEEEESSSCTT
T ss_pred             CCCcCcEEEECccHhh
Confidence            9999999999999753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.8e-52  Score=359.67  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=218.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .||+||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.+++++.+|++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999999998888776665   5678899999999999999999999998


Q ss_pred             -CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          107 -NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       107 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                       +++|+||||||..  ...++.+++.++|++++++|+.+++.+.+++.|.|.++..|++|++||..+..+.+.+..|+++
T Consensus        82 ~g~idilinnag~~--~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          82 DGKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TSCCCEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEecccccc--ccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence             5899999999988  5667999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+++++|++.+++|++++|||||+|+||+++|+|.........   ..++..+......|+ +|+++|+|+|+++.||++
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~~~pl-gR~~~pediA~~v~fL~S  235 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNP---HQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCF  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhh---hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999876543321   123333444455566 999999999999999999


Q ss_pred             CCCCcccccEEEecCCcccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.+.|+|||.|.+|||++..
T Consensus       236 ~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         236 PAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhCCCcCcEEEeCCCeecc
Confidence            99999999999999999863

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.6e-53  Score=364.83  Aligned_cols=254  Identities=31%  Similarity=0.443  Sum_probs=204.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      ..++.++++|++++++++++++++.
T Consensus         1 ~rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           1 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999988887765      2358899999999999999999999


Q ss_pred             HHcCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc-ccccCCCCc
Q 022418          104 SKHNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT-GLLGGLAQH  180 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~-~~~~~~~~~  180 (297)
                      +++|++|+||||||....  ....+.+.+.++|++.+++|+.+++.++++++|+|++++ |++|+++|.. +..+.+...
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            999999999999998631  223456678999999999999999999999999997654 6666666655 577888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      +|++||+|+++|+++++.|++++|||||+|+||+|+|+|.........................|. +|+++|+|+|+++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~v  238 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999998865532211111122223333444555 9999999999999


Q ss_pred             HHHhcC-CCCcccccEEEecCCcccc
Q 022418          261 LYLASD-DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       261 ~~l~~~-~~~~~tG~~i~vdgG~~~~  285 (297)
                      .||+++ .+.|+|||+|.+|||+++.
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~slv  264 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGSSLI  264 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHhCCcccCCccCceEEeCCChhhC
Confidence            999985 4899999999999999863

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-52  Score=356.82  Aligned_cols=240  Identities=26%  Similarity=0.347  Sum_probs=213.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .+.|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++. .+..+.+|++|+++++++++    ++|+
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~----~~g~   76 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALG----SVGP   76 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHH----HhCC
Confidence            356899999999999999999999999999999999999999999888874 57889999999999877664    6799


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      +|+||||||..  ..+++.+.+.++|++.+++|+.+++.+++++.|.+. +++.|++|++||..+..+.+...+|++||+
T Consensus        77 iDilVnnAg~~--~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKa  154 (244)
T d1pr9a_          77 VDLLVNNAAVA--LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKG  154 (244)
T ss_dssp             CCEEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             ceEEEeccccc--cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHH
Confidence            99999999987  667899999999999999999999999999999754 456799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      |++.|++.++.|++++|||||+|+||+|+|++.+....       .....+......|+ +|+++|+|+|+.+.||+++.
T Consensus       155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-------~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~  226 (244)
T d1pr9a_         155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-------DPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-------SHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-------ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999998754321       12223333444555 99999999999999999999


Q ss_pred             CCcccccEEEecCCcc
Q 022418          268 AKYVSGHNLVVDGGFT  283 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~  283 (297)
                      +.|+|||+|.+|||++
T Consensus       227 a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         227 SGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             hCCcCCcEEEECccHh
Confidence            9999999999999997

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=5.1e-52  Score=358.83  Aligned_cols=248  Identities=26%  Similarity=0.382  Sum_probs=217.0

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ++..|+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++|++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999998877665544    67899999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-CCCceEEEEecccccc------
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-RRSGCILCTASVTGLL------  174 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~vss~~~~~------  174 (297)
                      +.+++|++|+||||||..  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+ +..+.+++++|.....      
T Consensus        81 ~~~~~g~iDilVnnAg~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVS--VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             HHHHSCSEEEEEECCCCC--CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHhCCCcEeccccccc--ccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence            999999999999999987  6777999999999999999999999999999999854 4567777777766543      


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCH
Q 022418          175 -GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEP  253 (297)
Q Consensus       175 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (297)
                       +.+...+|+++|+|++.|+|.++.|++++|||||+|+||+|+|++.....         ++..+......|+ +|+++|
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~~~pl-~R~g~p  228 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---------KKIRDHQASNIPL-NRFAQP  228 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHTCTT-SSCBCG
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC---------HHHHHHHHhcCCC-CCCcCH
Confidence             23466789999999999999999999999999999999999999876532         2233334445555 899999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          254 NDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       254 ~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +|+|+++.||+++.+.|+|||+|.+|||++++
T Consensus       229 edvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         229 EEMTGQAILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence            99999999999999999999999999999764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-52  Score=365.11  Aligned_cols=257  Identities=25%  Similarity=0.406  Sum_probs=212.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      +.++.+++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999998887776      23588999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec-ccccccCCCCcc
Q 022418          105 KHNQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS-VTGLLGGLAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss-~~~~~~~~~~~~  181 (297)
                      ++|++|++|||||.....  .....+.+.++|++.+++|+.+++.++++++|+|++++ |.+|+++| .++..+.+.+..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~  160 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY  160 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcch
Confidence            999999999999987321  11234677889999999999999999999999998755 55555555 567888899999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+++|+|+++|+++++.|++++|||||+|+||+|+|+|.........................|+ +|+++|+|+|+++.
T Consensus       161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~pediA~~v~  239 (272)
T d1xkqa_         161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999998865431110000001111111222344 99999999999999


Q ss_pred             HHhcCC-CCcccccEEEecCCcccccCCC
Q 022418          262 YLASDD-AKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       262 ~l~~~~-~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      ||++++ ..|+|||+|.+|||+++..+..
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l~~g~~  268 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSLVMGTQ  268 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGCBGGG
T ss_pred             HHhCcchhCCccCeEEEeCcCHHHhcCCC
Confidence            999976 4789999999999999986554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-52  Score=363.21  Aligned_cols=247  Identities=24%  Similarity=0.359  Sum_probs=218.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--------CCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--------GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      -.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++        +.++..+.||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            5699999999999999999999999999999999999999888777665        35788999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      +.+++|++|+||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++|+ .+..+.+....
T Consensus        88 ~~~~~G~iDiLVnnAg~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~  164 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ--FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVH  164 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHH
T ss_pred             HHHHhCCeEEEEeecccc--ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-ccccccccccc
Confidence            999999999999999987  677799999999999999999999999999999999888899998865 45567788889


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+++|+|+++|+|++|.|++++|||||+|+||+|+|++..+......     ++..+......|. +|+++|+|+|+++.
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-----~~~~~~~~~~~pl-gR~g~pedvA~~v~  238 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-----QSFFEGSFQKIPA-KRIGVPEEVSSVVC  238 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-----GGGGTTGGGGSTT-SSCBCTHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC-----HHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999998765433211     1111222233444 99999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ||+++.+.|+|||+|.+|||+++.
T Consensus       239 fL~Sd~s~~iTG~~i~VDGG~sl~  262 (297)
T d1yxma1         239 FLLSPAASFITGQSVDVDGGRSLY  262 (297)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCchhcCcCCcEEEeCcChhhh
Confidence            999999999999999999999886

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.1e-52  Score=358.54  Aligned_cols=248  Identities=18%  Similarity=0.191  Sum_probs=218.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      |+|||||++|||+++|++|+++|++|++++|+.+.+++.....   ..+..+|++++++++++++++.+++|++|+||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~---~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH---HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh---CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            8999999999999999999999999999999988877765432   1234689999999999999999999999999999


Q ss_pred             ccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHH
Q 022418          116 AGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKS  195 (297)
Q Consensus       116 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  195 (297)
                      ||... ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+...+|++||+|+++|+|+
T Consensus        79 Ag~~~-~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~  157 (252)
T d1zmta1          79 DIFAP-EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  157 (252)
T ss_dssp             CCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CcCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHH
Confidence            99763 44678899999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             HHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccE
Q 022418          196 MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHN  275 (297)
Q Consensus       196 la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~  275 (297)
                      ++.|++++|||||+|+||+++|++..............+. .+......|+ +|+++|||+|+++.||+++.+.|+|||+
T Consensus       158 lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~-~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s~~iTG~~  235 (252)
T d1zmta1         158 LSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEH-VAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTGQV  235 (252)
T ss_dssp             HHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHH-HHHHHHHSSS-SSCBCHHHHHHHHHHHHTTSCGGGTTCE
T ss_pred             HHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            9999999999999999999999988655433333333333 3444455566 8999999999999999999999999999


Q ss_pred             EEecCCcccccCCC
Q 022418          276 LVVDGGFTSFKNLK  289 (297)
Q Consensus       276 i~vdgG~~~~~~~~  289 (297)
                      |.+|||+++..+++
T Consensus       236 i~vdGG~~~~~~~p  249 (252)
T d1zmta1         236 FWLAGGFPMIERWP  249 (252)
T ss_dssp             EEESTTCCCCCCCT
T ss_pred             EEECCCceeCCCCC
Confidence            99999999876653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4e-51  Score=349.12  Aligned_cols=239  Identities=30%  Similarity=0.465  Sum_probs=209.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++.++++|++++++++++++++.+++|++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            58999999999999999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      ++|||||..  ...++.+.+.++|++++++|+.+++.+++++.|++.++  +.++++ |..+..+.+.+..|+++|+|++
T Consensus        82 iLinnAg~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~-ss~a~~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          82 GVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLT-GSVAGLGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             EEEEGGGGT--TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEE-CCCTTCCHHHHHHHHHCSSHHH
T ss_pred             Eeccccccc--cccchhhhhccccccccccccccccccccccccccccc--cceeec-cccccccccCccccchhhHHHH
Confidence            999999987  56779999999999999999999999999999998654  445544 4455555577889999999999


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCc
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKY  270 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~  270 (297)
                      +|++.+++|++++|||||+|+||+++|++....        .++ ..+......|. +|+++|+|+|+++.||+++.+.|
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--------~~~-~~~~~~~~~p~-~r~~~p~dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAGL--------PPW-AWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY  226 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--------CHH-HHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--------hHh-HHHHHHhCCCC-CCCcCHHHHHHHHHHHhcchhCC
Confidence            999999999999999999999999999987532        222 23333344555 99999999999999999999999


Q ss_pred             ccccEEEecCCccc
Q 022418          271 VSGHNLVVDGGFTS  284 (297)
Q Consensus       271 ~tG~~i~vdgG~~~  284 (297)
                      +||++|.+|||+++
T Consensus       227 itG~~i~vDGG~s~  240 (241)
T d2a4ka1         227 ITGQALYVDGGRSI  240 (241)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CcCceEEeCCCccc
Confidence            99999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.4e-51  Score=358.93  Aligned_cols=253  Identities=26%  Similarity=0.380  Sum_probs=216.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++..+.+|++++++++++++++.+++|++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            67999999999999999999999999999999999999999999988888889999999999999999999999999999


Q ss_pred             cEEEECccCCCCCCC---ccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          110 DIMYNNAGVACKTPR---SIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       110 d~li~~ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|||||+......   ...+.+.++|++.+++|+.+++.++++++|.|+++ +|++|+++|..+..+.+...+|+++|
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~asK  159 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAK  159 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHHH
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHHH
Confidence            999999998632221   22344466899999999999999999999999765 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      +|+++|+|++|.|+++. ||||+|+||+|+|++.......... ....+...+......|. +|+++|+|+|++++||++
T Consensus       160 aal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeva~~v~fL~S  237 (276)
T d1bdba_         160 HAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVFFAT  237 (276)
T ss_dssp             HHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-SSCCCGGGGSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            99999999999999975 9999999999999987544322111 11222333444455555 999999999999999998


Q ss_pred             C-CCCcccccEEEecCCcccc
Q 022418          266 D-DAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       266 ~-~~~~~tG~~i~vdgG~~~~  285 (297)
                      + .+.|+|||+|.||||++..
T Consensus       238 ~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         238 RGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHHHTTCSSCEEEESSSGGGC
T ss_pred             CcccCCeeCcEEEECcChhhc
Confidence            4 6899999999999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.9e-50  Score=341.65  Aligned_cols=231  Identities=26%  Similarity=0.423  Sum_probs=204.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.      ...++.||+++.      ++.+.++++++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~------~~~~~~~Dv~~~------~~~~~~~~g~iD~   69 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVVCDLRKD------LDLLFEKVKEVDI   69 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEECCTTTC------HHHHHHHSCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc------CCcEEEcchHHH------HHHHHHHhCCCcE
Confidence            7899999999999999999999999999999999998655432      345678999864      4455667899999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||||||..  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|++|+++|..+..+.+....|+++|+|++.
T Consensus        70 lVnnAG~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~  147 (234)
T d1o5ia_          70 LVLNAGGP--KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG  147 (234)
T ss_dssp             EEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEeccccc--CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHH
Confidence            99999976  6677899999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcc
Q 022418          192 LVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYV  271 (297)
Q Consensus       192 ~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~  271 (297)
                      |+|.++.|++++|||||+|+||+++|++......        +...+......|+ +|+++|||+|++++||+++.++|+
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--------~~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~~i  218 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--------EEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYL  218 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--------HHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhhhhhcC--------HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhcCC
Confidence            9999999999999999999999999998866532        2223334444555 999999999999999999999999


Q ss_pred             cccEEEecCCcccc
Q 022418          272 SGHNLVVDGGFTSF  285 (297)
Q Consensus       272 tG~~i~vdgG~~~~  285 (297)
                      |||+|.+|||++.+
T Consensus       219 tG~~i~vDGG~s~~  232 (234)
T d1o5ia_         219 TGQTIVVDGGLSKF  232 (234)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             cCcEEEECcccccC
Confidence            99999999999865

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.7e-50  Score=344.87  Aligned_cols=246  Identities=21%  Similarity=0.245  Sum_probs=207.4

Q ss_pred             cCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+|+||++|||||++  |||+++|++|+++|++|++++|+++..++..+..  ..+...+++|++|+++++++++++.++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            589999999999987  9999999999999999999999876544433222  456788999999999999999999999


Q ss_pred             cCCccEEEECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          106 HNQLDIMYNNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       106 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +|++|++|||||....  ....+.+.+.++|++.+++|+.+++.+++++.|.|++  .|++|++||..+..+.+...+|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMA  161 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHH
Confidence            9999999999998631  1234667889999999999999999999999999864  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|++......       .++..+......|+ +|+++|||+|+++.||
T Consensus       162 asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-------~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL  233 (256)
T d1ulua_         162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQTAPL-RRNITQEEVGNLGLFL  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------CHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-------hHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998764321       22333444455566 9999999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.|+|||+|.+|||++++
T Consensus       234 ~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         234 LSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCchhCCccCCeEEECcCEeCc
Confidence            9999999999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=6.1e-49  Score=341.72  Aligned_cols=255  Identities=26%  Similarity=0.370  Sum_probs=218.2

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .+.+.+|+||++|||||++|||++++++|+++|++|++++|+.+ .+++..+++   +.++.++.+|++|++++.+++++
T Consensus        10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH
Confidence            44667899999999999999999999999999999999988754 455554443   67899999999999999999999


Q ss_pred             HHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCCCCc
Q 022418          102 TISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGLAQH  180 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~~~~  180 (297)
                      +.+++|++|++|||+|..  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+  .+++++++|..+.. +.+...
T Consensus        90 ~~~~~g~idilV~nag~~--~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~  165 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHA  165 (272)
T ss_dssp             HHHHHSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCH
T ss_pred             HHHHhCCCCccccccccc--hhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchh
Confidence            999999999999999987  6677899999999999999999999999999999965  47888888877654 456667


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc---CCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA---GVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      .|+++|+|+++|+|.++.|++++|||||+|+||+|+|++..........   ....+...+.......+.+|+++|+|+|
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA  245 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHH
Confidence            8999999999999999999999999999999999999998776554322   2233333333333333349999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++.||+++.+.|+||++|.+|||+++
T Consensus       246 ~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         246 RVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.6e-49  Score=340.80  Aligned_cols=247  Identities=27%  Similarity=0.406  Sum_probs=214.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-LGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .|+||++|||||++|||+++|+.|+++|++|++++++.+ .+++..+++   +.+++.+.+|++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            489999999999999999999999999999998766544 455554443   6789999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-cCCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-GGLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-~~~~~~~Y~~s  185 (297)
                      |++|++|||||..  ...++.+.+.++|++.+++|+.+++.+++.++|+|++  .+++++++|..+.. +.+.+..|+++
T Consensus        83 g~idilinnag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~as  158 (259)
T d1ja9a_          83 GGLDFVMSNSGME--VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGS  158 (259)
T ss_dssp             SCEEEEECCCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred             CCCcEEEeccccc--cccccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHH
Confidence            9999999999987  6777899999999999999999999999999999965  36777777766644 67888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhh----cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIY----AGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |+|++.|+|.++.|++++|||||+|+||+++|++.++......    .....++..+......|. +|+++|+|||++++
T Consensus       159 K~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         159 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-CCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999887644321    223345555666666666 89999999999999


Q ss_pred             HHhcCCCCcccccEEEecCCc
Q 022418          262 YLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      ||+++.++|+||++|.+|||.
T Consensus       238 fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         238 ALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999996

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=340.78  Aligned_cols=242  Identities=29%  Similarity=0.414  Sum_probs=206.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.||++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999988887776     2468889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC---CceEEEEecccccccCCCCccch
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR---SGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      |++|+||||||...  .        ++|++.+++|+.+++.++++++|+|.++.   .|+||++||..+..+.+.+.+|+
T Consensus        81 G~iDilVnnAg~~~--~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  150 (254)
T d2gdza1          81 GRLDILVNNAGVNN--E--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  150 (254)
T ss_dssp             SCCCEEEECCCCCC--S--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCcCeecccccccc--c--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchH
Confidence            99999999999762  2        34789999999999999999999997653   48899999999999999999999


Q ss_pred             hhHHHHHHHHHH--HHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          184 VSKSAIIGLVKS--MAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       184 ~sK~a~~~~~~~--la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      +||+|+++|+|+  |+.|++++|||||+|+||+|+|+|++............+ ..+......+. +++++|+|+|++++
T Consensus       151 asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~~~~~~~~p~-~r~~~pedvA~~v~  228 (254)
T d2gdza1         151 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIE-YKDHIKDMIKY-YGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGG-GHHHHHHHHHH-HCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHH-HHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            999999999996  788999999999999999999999876543221111111 11122222333 78899999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ||++++  ++|||+|.||||.+++-+
T Consensus       229 fL~s~~--~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         229 TLIEDD--ALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEEEC
T ss_pred             HHHcCC--CCCCCEEEECCCCeeecc
Confidence            999875  599999999999987654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-49  Score=336.06  Aligned_cols=242  Identities=33%  Similarity=0.512  Sum_probs=212.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++||++|||||++|||+++++.|+++|++|++++|+++++++..++  ..+....+|+.+.+.++..    .+.++++|
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~--~~~~~~~~d~~~~~~~~~~----~~~~~~id   76 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--PGIQTRVLDVTKKKQIDQF----ANEVERLD   76 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS--TTEEEEECCTTCHHHHHHH----HHHCSCCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--cCCceeeeecccccccccc----ccccccce
Confidence            49999999999999999999999999999999999999887776554  3477888999887666554    44668999


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc-ccCCCCccchhhHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVSKSAI  189 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK~a~  189 (297)
                      +||||||..  ..+++.+.+.++|++.+++|+.+++.+++++.|.|.+++.|++|+++|..+. .+.+.+.+|+++|+|+
T Consensus        77 ~lVn~ag~~--~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal  154 (245)
T d2ag5a1          77 VLFNVAGFV--HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV  154 (245)
T ss_dssp             EEEECCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHH
T ss_pred             eEEeccccc--CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHH
Confidence            999999987  6677899999999999999999999999999999998889999999998775 5778888999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 022418          190 IGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAK  269 (297)
Q Consensus       190 ~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~  269 (297)
                      ++|+|++|.|++++|||||+|+||+++|++.......   ....+..........|. +|+++|||+|+++.||+++++.
T Consensus       155 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~~~~~pl-~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA---RGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH---SSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhh---hhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhC
Confidence            9999999999999999999999999999998766543   22344444555555666 9999999999999999999999


Q ss_pred             cccccEEEecCCccc
Q 022418          270 YVSGHNLVVDGGFTS  284 (297)
Q Consensus       270 ~~tG~~i~vdgG~~~  284 (297)
                      |+|||+|.||||+++
T Consensus       231 ~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         231 YVTGNPVIIDGGWSL  245 (245)
T ss_dssp             TCCSCEEEECTTGGG
T ss_pred             CCcCceEEeCCCcCC
Confidence            999999999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-49  Score=346.80  Aligned_cols=235  Identities=24%  Similarity=0.364  Sum_probs=209.7

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC---------chhHHHHHHHhCCCeeEEEecCCCHHHHHHH
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ---------HQLGQQTAKELGPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~---------~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~   98 (297)
                      .+|+++||++|||||++|||+++|++|+++|++|++++|+         .+.+++..++++.+.....+|+++.++++++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence            3689999999999999999999999999999999998765         3445666666655667788999999999999


Q ss_pred             HHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCC
Q 022418           99 VDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLA  178 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~  178 (297)
                      ++++.+++|++|+||||||+.  ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGIL--RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCC--CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCccC--CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence            999999999999999999988  677899999999999999999999999999999999888999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      +.+|++||+|+..|+++++.|++++||+||+|+||++.|++....         .+..           .+.++|||+|+
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------~~~~-----------~~~~~PedvA~  218 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------PEDL-----------VEALKPEYVAP  218 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------CHHH-----------HHHSCGGGTHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------cHhh-----------HhcCCHHHHHH
Confidence            999999999999999999999999999999999999988764322         1111           23457999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++||+++.+ ++||++|.+|||+.-.
T Consensus       219 ~v~fL~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         219 LVLWLCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             HHHHHTSTTC-CCCSCEEEEETTEEEE
T ss_pred             HHHHHcCCCc-CCCCcEEEeCCCceeE
Confidence            9999999875 7899999999998654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2e-48  Score=331.96  Aligned_cols=226  Identities=26%  Similarity=0.313  Sum_probs=205.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCe-------EEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAK-------VVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~-------Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.+++..+++   +.++.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999998       899999999988887766   56788999999999999999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++|++|+||||||..  ..+++.+.+.++|++++++|+.+++.++++++|+|++++.|++|++||..+..+.+.+..|++
T Consensus        82 ~~g~iDilvnnAg~~--~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccc--cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            999999999999987  677899999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      ||+|+++|+++++.|++++||+||+|+||+|+|+|+....+.                   ...++++|||+|++++||+
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-------------------~~~~~~~PedvA~~v~~l~  220 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-------------------MQALMMMPEDIAAPVVQAY  220 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-------------------TGGGSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-------------------hHhcCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999987543110                   1146778999999999999


Q ss_pred             cCCCCcccccE-EEecCC
Q 022418          265 SDDAKYVSGHN-LVVDGG  281 (297)
Q Consensus       265 ~~~~~~~tG~~-i~vdgG  281 (297)
                      +++..+++|+. +..+||
T Consensus       221 s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         221 LQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             TSCTTEEEEEEEEEETTC
T ss_pred             cCCccCccCCEEEEecCC
Confidence            99888888874 556776

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=329.00  Aligned_cols=241  Identities=27%  Similarity=0.374  Sum_probs=207.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +-+++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++     ..++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34599999999999999999999999999999999999999988887776     2468889999999999999999999


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEeccccccc--CCCC
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLLG--GLAQ  179 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~~--~~~~  179 (297)
                      +++|++|+||||||..  ..+++.+.+.++|++.+++|+.+++++.+.++|.|++++  .|++|++||..+...  ....
T Consensus        85 ~~~g~iD~lVnnAg~~--~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~  162 (257)
T d1xg5a_          85 SQHSGVDICINNAGLA--RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  162 (257)
T ss_dssp             HHHCCCSEEEECCCCC--CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             HhcCCCCEEEeccccc--CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCccc
Confidence            9999999999999987  677899999999999999999999999999999987543  699999999998654  4555


Q ss_pred             ccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 022418          180 HTYSVSKSAIIGLVKSMAAEL--CEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia  257 (297)
                      ..|+++|+++.+|+++++.|+  .++||+||+|+||+++|++.....+.     ..+.    .....+. +++++|+|+|
T Consensus       163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-----~~~~----~~~~~~~-~r~~~pedvA  232 (257)
T d1xg5a_         163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-----DPEK----AAATYEQ-MKCLKPEDVA  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-----CHHH----HHHHHC----CBCHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-----hHHH----HHhcCCC-CCCcCHHHHH
Confidence            679999999999999999998  67899999999999999987654321     1111    2222334 8899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCC
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      ++++||+++++.|+|||++..++|
T Consensus       233 ~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         233 EAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHhCChhcCeECCEEEEeCC
Confidence            999999999999999997665555

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.7e-47  Score=333.38  Aligned_cols=249  Identities=24%  Similarity=0.331  Sum_probs=214.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++++++++++++.+.++
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            4899999999999999999999999999999999999998877766554    678899999999999999999999999


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhcc-CCCCceEEEEecccccccCCCCccchh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMI-PRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      ++++|++|||||..  ....+.+.+.++|++.+.+|+.+.+.+.+...+.+. .+..+.+++++|..+..+.+...+|++
T Consensus       101 ~g~iDilvnnAg~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         101 AGHPNIVINNAAGN--FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             TCSCSEEEECCCCC--CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             ccccchhhhhhhhc--cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            99999999999987  566788899999999999999999999888776665 455677888888888888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|+|++.|+|.+|.|++++|||||+|+||+|+|++......      ..+...+......|. +|+++|+|+|+++.||+
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~  251 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD------PTGTFEKEMIGRIPC-GRLGTVEELANLAAFLC  251 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC------TTSHHHHHHHTTCTT-SSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC------CcHHHHHHHhhcCCC-CCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998765432      122233444445555 99999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccccC
Q 022418          265 SDDAKYVSGHNLVVDGGFTSFKN  287 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~~~  287 (297)
                      ++.+.|+||++|.+|||.++...
T Consensus       252 sd~s~~itG~~i~vDGG~~l~~~  274 (294)
T d1w6ua_         252 SDYASWINGAVIKFDGGEEVLIS  274 (294)
T ss_dssp             SGGGTTCCSCEEEESTTHHHHHH
T ss_pred             CchhcCCCCcEEEECCChhheeC
Confidence            99999999999999999886643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-45  Score=315.65  Aligned_cols=241  Identities=18%  Similarity=0.173  Sum_probs=206.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFIS---NGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~---~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      ..|+||+++||||++|||+++|++|++   +|++|++++|+.+++++..+++     +.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999996   7999999999999998887765     45788999999999999999998


Q ss_pred             HHHH----cCCccEEEECccCCCC-CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC--CceEEEEecccccc
Q 022418          102 TISK----HNQLDIMYNNAGVACK-TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR--SGCILCTASVTGLL  174 (297)
Q Consensus       102 ~~~~----~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~vss~~~~~  174 (297)
                      +.+.    ++.+|++|||||.... ..+.+.+.+.++|++++++|+.+++.++++++|+|++++  .|++|++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    4578999999998642 345678899999999999999999999999999998765  58999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      +.+.+..|++||+++++|+++|+.|  .+|||||+|+||+|+|+|........    ..++.........+. +++++|+
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~~~-~r~~~p~  234 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETS----KDPELRSKLQKLKSD-GALVDCG  234 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHC----SCHHHHHHHHHHHHT-TCSBCHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcC----CCHHHHHHHHhcCCC-CCCCCHH
Confidence            9999999999999999999999999  57999999999999999887654321    112222222222333 8899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEe
Q 022418          255 DIANAALYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~v  278 (297)
                      |+|+.+++|+++. +|+||++|++
T Consensus       235 evA~~i~~ll~~~-s~~TG~~idv  257 (259)
T d1oaaa_         235 TSAQKLLGLLQKD-TFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHHC-CSCTTEEEET
T ss_pred             HHHHHHHHHhhhc-cCCCCCeEEe
Confidence            9999999999865 7999999986

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-44  Score=309.10  Aligned_cols=237  Identities=30%  Similarity=0.460  Sum_probs=206.2

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..++++.+.....+|+.+.+.+++..+.+...++.+|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            79999999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             EEEECccCCCCC----CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC------CCceEEEEecccccccCCCCc
Q 022418          111 IMYNNAGVACKT----PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR------RSGCILCTASVTGLLGGLAQH  180 (297)
Q Consensus       111 ~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~vss~~~~~~~~~~~  180 (297)
                      .+++|++.....    ..++.+.+.++|++.+++|+.+++++++++.|.+..+      +.|+||++||..+..+.+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            999999876322    2245567899999999999999999999999997543      578999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAA  260 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  260 (297)
                      +|+++|+|+++|+|.++.|++++|||||+|+||+++|++.....         ++..+......|+.+|+++|||+|+++
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---------EKVCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC---------HHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999876532         122233444555558999999999999


Q ss_pred             HHHhcCCCCcccccEEEe
Q 022418          261 LYLASDDAKYVSGHNLVV  278 (297)
Q Consensus       261 ~~l~~~~~~~~tG~~i~v  278 (297)
                      .||++  ..|+|||+|.|
T Consensus       233 ~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         233 QAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHH--CTTCCSCEEEE
T ss_pred             HHHHh--CCCCCceEeEC
Confidence            99997  47999999976

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=309.25  Aligned_cols=216  Identities=24%  Similarity=0.353  Sum_probs=195.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.+++++.||++|+++++++++.+.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999999999999999988887765   5689999999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      |++|++|||||..  ....+.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..+.+.+..|++||
T Consensus        83 g~idilinnag~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCC--CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeecccc--ccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            9999999999988  56668889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcc---CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          187 SAIIGLVKSMAAELCE---YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       187 ~a~~~~~~~la~el~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +|+++|+++|+.|+++   .||+||+|+||+|+|++.+.....                    ..+..+|||+|+.+...
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~--------------------~~~~~~pe~va~~i~~~  220 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS--------------------LGPTLEPEEVVNRLMHG  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHH--------------------HCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCcc--------------------ccCCCCHHHHHHHHHHH
Confidence            9999999999999876   479999999999999987643211                    15667899999999887


Q ss_pred             hcCC
Q 022418          264 ASDD  267 (297)
Q Consensus       264 ~~~~  267 (297)
                      +..+
T Consensus       221 ~~~~  224 (244)
T d1yb1a_         221 ILTE  224 (244)
T ss_dssp             HHTT
T ss_pred             HhcC
Confidence            6554

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=5e-45  Score=313.44  Aligned_cols=238  Identities=22%  Similarity=0.228  Sum_probs=197.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCC-CHHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVT-KESDVSDAVDFTIS  104 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s-~~~~i~~~~~~~~~  104 (297)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+..++..+..    +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999988877655443321    457888999998 67789999999999


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC---CCceEEEEecccccccCCCCcc
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR---RSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~vss~~~~~~~~~~~~  181 (297)
                      ++|+||+||||||..          +.++|++++++|+.+++.++++++|+|.++   ..|+||++||..+..+.+.+.+
T Consensus        81 ~~g~iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HcCCCCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            999999999999964          245689999999999999999999999765   3689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAAL  261 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~  261 (297)
                      |++||+|+.+|+++++.|+.++|||||+|+||+|+|++.+.....  .+.. +...+.     +..++..+||++|+.++
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~--~~~~-~~~~~~-----~~~~~~~~~e~va~~~~  222 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW--LDVE-PRVAEL-----LLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG--GGSC-TTHHHH-----HTTSCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccc--hhHH-HHHHhc-----cccCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999986543211  1111 111111     12255678999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcccccCC
Q 022418          262 YLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       262 ~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ++++..   .||+++.+|||......+
T Consensus       223 ~~~~~~---~tG~vi~vdgG~l~~~~~  246 (254)
T d1sbya1         223 KAIEAN---KNGAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             HHHHHC---CTTCEEEEETTEEEECCC
T ss_pred             HhhhCC---CCCCEEEECCCEeCccCC
Confidence            888654   599999999997655544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-43  Score=303.77  Aligned_cols=245  Identities=21%  Similarity=0.231  Sum_probs=209.1

Q ss_pred             CCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      -|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+..  ......+.+|+++..++.+.++...+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            37999999999998  8999999999999999999999976544433222  4567888999999999999999999999


Q ss_pred             CCccEEEECccCCCCCC---CccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          107 NQLDIMYNNAGVACKTP---RSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       107 g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      +++|++|||++......   ........+.|...+++|+.+.+.+.+++.+.+.+  .+.++++||..+..+.+.+..|+
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHH
Confidence            99999999999863211   11234567889999999999999999999998853  46799999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l  263 (297)
                      +||+|++.|++.++.|++++|||||+|+||+|+|++.....       ..+...+......|. +|+++|||+|+++.||
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~~~~~~~~~~pl-~R~~~peeia~~v~fL  231 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFL  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc-------hhhhHHHHHHhCCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876432       233333444455555 9999999999999999


Q ss_pred             hcCCCCcccccEEEecCCcccc
Q 022418          264 ASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       264 ~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +++.+.|+||++|.+|||+++.
T Consensus       232 ~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         232 CSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCchhcCccCceEEECcCHHHh
Confidence            9999999999999999999876

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.9e-43  Score=305.29  Aligned_cols=239  Identities=22%  Similarity=0.240  Sum_probs=192.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHh----CCCee-----------------EEEecCCCH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQH-QLGQQTAKEL----GPNAT-----------------FIACDVTKE   92 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~-~~~~~~~~~~----~~~v~-----------------~~~~D~s~~   92 (297)
                      -++|||||++|||+++|++|+++|++|++++++. +..++..+++    +....                 ...+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            3799999999999999999999999999987765 4455544443    23333                 345669999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHH--------------HHHHHHhhhHHHHHHHHHHHhc--
Q 022418           93 SDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVF--------------DQVMRINVRGVVAGIKHSTRVM--  156 (297)
Q Consensus        93 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~l--  156 (297)
                      ++++++++++.+++|++|+||||||..  ...++.+.+.++|              ...+.+|+.+++.+.+.+.+.+  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSF--YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC--CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCcc--CCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            999999999999999999999999987  4455555554444              4578999999999999988754  


Q ss_pred             ----cCCCCceEEEEecccccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC
Q 022418          157 ----IPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD  232 (297)
Q Consensus       157 ----~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~  232 (297)
                          .+...+++++++|.....+.+.+.+|+++|+|++.|++.++.|++++|||||+|+||++.+....           
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~-----------  229 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-----------  229 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS-----------
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC-----------
Confidence                34457899999999999999999999999999999999999999999999999999987654221           


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          233 ASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      .+...+......++.+|+++|+|+|+++.||+++.+.|+|||+|.+|||+++++
T Consensus       230 ~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         230 PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             CHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            122233334445555899999999999999999999999999999999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.7e-43  Score=307.40  Aligned_cols=256  Identities=20%  Similarity=0.242  Sum_probs=205.3

Q ss_pred             CccCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------------C--CCe-eEEEec--
Q 022418           28 ESRKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------------G--PNA-TFIACD--   88 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------------~--~~v-~~~~~D--   88 (297)
                      .+++|+||++|||||++  |||+++|++|+++|++|++++|+.+.........            .  ... ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            46899999999999875  9999999999999999999999875433322211            0  011 122333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHH
Q 022418           89 ------------------VTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIK  150 (297)
Q Consensus        89 ------------------~s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  150 (297)
                                        .++..+++++++++.+++|++|+||||||......+++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              35566778999999999999999999999864445678899999999999999999999999


Q ss_pred             HHHHhccCCCCceEEEEeccccc-ccCCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCccCcchhhHHHHhh
Q 022418          151 HSTRVMIPRRSGCILCTASVTGL-LGGLAQHTYSVSKSAIIGLVKSMAAELC-EYGIRINCISPFAIPTPFVMEEMSQIY  228 (297)
Q Consensus       151 ~~~~~l~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~  228 (297)
                      +++|.+.++  +.++.+++.... ...+....|+++|+++..+++.++.++. ++|||||+|+||+++|++.....    
T Consensus       162 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~----  235 (297)
T d1d7oa_         162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG----  235 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS----
T ss_pred             HHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc----
Confidence            999988654  556666666554 3446667899999999999999999996 67999999999999999876431    


Q ss_pred             cCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCCCCc
Q 022418          229 AGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLPAPV  294 (297)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~~~~  294 (297)
                         ..+...+......|+ +|+++|||||+++.||+++.+.|+|||+|.+|||++. .+..+|+|+
T Consensus       236 ---~~~~~~~~~~~~~Pl-gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~-~G~~~~~~~  296 (297)
T d1d7oa_         236 ---FIDTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS-MGVALDSPV  296 (297)
T ss_dssp             ---HHHHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG-CSSCTTCTT
T ss_pred             ---CCHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh-cCCCCCCCC
Confidence               123333444455555 9999999999999999999999999999999999985 688888774

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.8e-43  Score=310.20  Aligned_cols=250  Identities=15%  Similarity=0.184  Sum_probs=201.8

Q ss_pred             CCCEEEEEc--CCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC---------------CCeeEE----------
Q 022418           33 EEKVALITG--AASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---------------PNATFI----------   85 (297)
Q Consensus        33 ~~k~vlVtG--as~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---------------~~v~~~----------   85 (297)
                      .+|++||||  +++|||+++|++|+++|++|++++++............               ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  66899999999999999999999988764443332210               011122          


Q ss_pred             ----------EecCCCHHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh
Q 022418           86 ----------ACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV  155 (297)
Q Consensus        86 ----------~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  155 (297)
                                .+|+++.++++++++.+.++||++|++|||+|......+++.+.+.++|++.+++|+.+++.++|++.|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      3477788899999999999999999999999987544567889999999999999999999999999999


Q ss_pred             ccCCCCceEEEEecccccccCCC-CccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCccCcchhhHH---------
Q 022418          156 MIPRRSGCILCTASVTGLLGGLA-QHTYSVSKSAIIGLVKSMAAELCE-YGIRINCISPFAIPTPFVMEEM---------  224 (297)
Q Consensus       156 l~~~~~g~iv~vss~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~pG~v~t~~~~~~~---------  224 (297)
                      |++  .|++|++||.++..+.|. ...|+++|+++++|+|.++.||++ +|||||+|+||+|+|+......         
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~  238 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred             ccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence            954  589999999999888776 457899999999999999999986 6999999999999995332100         


Q ss_pred             ---------------------------HHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEE
Q 022418          225 ---------------------------SQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLV  277 (297)
Q Consensus       225 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~  277 (297)
                                                 .........+...+......|+ +|+++|+|+|++++||+++.++|+|||+|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                       0011111233444455555666 999999999999999999999999999999


Q ss_pred             ecCCcccc
Q 022418          278 VDGGFTSF  285 (297)
Q Consensus       278 vdgG~~~~  285 (297)
                      ||||++++
T Consensus       318 VDGG~~~~  325 (329)
T d1uh5a_         318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             ECCCcccc
Confidence            99999764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-41  Score=289.96  Aligned_cols=232  Identities=26%  Similarity=0.367  Sum_probs=195.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.         .+....++|+++.....++........ ..+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------ccceEeeccccchhhhHHHHHhhhccc-cccchh
Confidence            6999999999999999999999999999999998753         356788999999999999988887665 456666


Q ss_pred             ECccCCCC--CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh------ccCCCCceEEEEecccccccCCCCccchhh
Q 022418          114 NNAGVACK--TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV------MIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       114 ~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ++++....  ........+.+.|++.+++|+.+++.+++.+.+.      +.+++.|+||++||..+..+.+.+.+|+++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  150 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS  150 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHH
Confidence            66665421  1223455778999999999999999999999998      455678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLAS  265 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~  265 (297)
                      |+|+++|+|+++.|++++|||||+|+||+|+|++.....        .+. ........++.+|+++|||+|+++.||++
T Consensus       151 Kaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--------~~~-~~~~~~~~~~~~R~g~pedvA~~v~fL~s  221 (241)
T d1uaya_         151 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--------EKA-KASLAAQVPFPPRLGRPEEYAALVLHILE  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--------HHH-HHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--------hhH-HHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876532        222 22233344555899999999999999998


Q ss_pred             CCCCcccccEEEecCCccccc
Q 022418          266 DDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       266 ~~~~~~tG~~i~vdgG~~~~~  286 (297)
                        ..|+|||+|.+|||+++..
T Consensus       222 --~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         222 --NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             --CTTCCSCEEEESTTCCCCC
T ss_pred             --CCCCCCCEEEECCcccCCC
Confidence              3699999999999998764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.7e-41  Score=292.36  Aligned_cols=252  Identities=19%  Similarity=0.159  Sum_probs=207.7

Q ss_pred             CCCCCEEEEEcC--CCcHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc-
Q 022418           31 KLEEKVALITGA--ASGIGKATAAKFISNGAKVVIADIQHQLGQ-QTAKELGPNATFIACDVTKESDVSDAVDFTISKH-  106 (297)
Q Consensus        31 ~~~~k~vlVtGa--s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~-  106 (297)
                      -++||++|||||  ++|||+++|++|+++|++|++++|+.+++. +..++++.+...++||++++++++++++.+.+.+ 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            489999999994  579999999999999999999999988764 4555567788899999999999999999987764 


Q ss_pred             --CCccEEEECccCCCC---CCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCcc
Q 022418          107 --NQLDIMYNNAGVACK---TPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHT  181 (297)
Q Consensus       107 --g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~  181 (297)
                        +++|++|||+|....   ...++.+.++++|.+.+++|+.+.+...+.+.+.+..   +.+++++|.....+.+.+..
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~~  159 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYNW  159 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTHH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccch
Confidence              679999999997632   2234667889999999999999999999988876632   45666777777788888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCC---CHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 022418          182 YSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGV---DASRLLELVYSTGVLEGTHCEPNDIAN  258 (297)
Q Consensus       182 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dia~  258 (297)
                      |+.+|+++++|++.++.|++++|||||+|+||+|+|++............   ..+...+......|+.+++.+|+|+|+
T Consensus       160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~  239 (268)
T d2h7ma1         160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999998865543221111   112233334455666566999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 022418          259 AALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       259 ~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.||+++.+.|+||++|.+|||++..
T Consensus       240 ~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         240 TVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHhCchhcCccCCEEEECcCcccc
Confidence            999999999999999999999999753

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-42  Score=301.85  Aligned_cols=238  Identities=24%  Similarity=0.328  Sum_probs=187.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEE---EeCCchhH---HHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVI---ADIQHQLG---QQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~---~~r~~~~~---~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .|++|||||++|||+++|++|+++|++|+.   +.|+.+..   .+..+++   +.++..+.||++|+++++++++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            578999999999999999999999998554   45554433   3334443   4678999999999999999998874 


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                       .|++|++|||+|..  ....+.+.+.++|++.+++|+.++++++++++|+|++++.|++|++||..+..+.+.+..|++
T Consensus        81 -~g~idilvnnag~~--~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          81 -EGRVDVLVCNAGLG--LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             -TSCCSEEEECCCCC--CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             -ccchhhhhhccccc--ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence             37999999999987  667788999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH---hhcCCCHHHHHHH---H-HhcCCCCCCCCCHHHHH
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ---IYAGVDASRLLEL---V-YSTGVLEGTHCEPNDIA  257 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~dia  257 (297)
                      ||+|+++|+++++.|++++||+||+|+||+|+|+++......   .......+....+   . .....+.++..+|||+|
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            999999999999999999999999999999999988654321   1111111111111   1 01111124577999999


Q ss_pred             HHHHHHhcCC---CCcccccE
Q 022418          258 NAALYLASDD---AKYVSGHN  275 (297)
Q Consensus       258 ~~~~~l~~~~---~~~~tG~~  275 (297)
                      ++++++++..   ..|++|+.
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHHhCCCCCeEEecHHH
Confidence            9999999654   45777764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=7.5e-41  Score=290.64  Aligned_cols=245  Identities=20%  Similarity=0.240  Sum_probs=195.3

Q ss_pred             CCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAK--ELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+  ..+....++.+|+++++++.++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            48999999999765  99999999999999999999999653333221  125567889999999999999999999999


Q ss_pred             CCccEEEECccCCCCC--CCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchh
Q 022418          107 NQLDIMYNNAGVACKT--PRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSV  184 (297)
Q Consensus       107 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~  184 (297)
                      |++|++|||+|.....  .....+..++.+...+.++..+.....+.+.+..  +..+.++++++.+...+.+....|++
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~a  159 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGL  159 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhH
Confidence            9999999999987421  1233345566666666666766666666665544  22345666666666777777789999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          185 SKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       185 sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|++++.++++++.|++++|||||+|+||+++|++.....       ..+..........+. +|+++|+|+|+.+.||+
T Consensus       160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p~-~r~~~pedIA~~v~fL~  231 (274)
T d2pd4a1         160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-------DFRMILKWNEINAPL-RKNVSLEEVGNAGMYLL  231 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC-------chHHHHHHHhhhhhc-cCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999876432       223333444444555 99999999999999999


Q ss_pred             cCCCCcccccEEEecCCcccc
Q 022418          265 SDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++.+.|+|||+|.+|||++.+
T Consensus       232 S~~s~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         232 SSLSSGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             ChhhCCCcCceEEECCChhhc
Confidence            999999999999999999876

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.4e-40  Score=283.67  Aligned_cols=241  Identities=24%  Similarity=0.272  Sum_probs=193.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHh----CCCeeEEEecCC----CHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKEL----GPNATFIACDVT----KESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~v~~~~~D~s----~~~~i~~~~~~~~~~  105 (297)
                      -++|||||++|||+++|++|+++|++|++++|+.++ .++..+++    +.+...+.+|..    .++.+.++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998764 34444444    456666666554    456788888888999


Q ss_pred             cCCccEEEECccCCCCCCC---------ccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccC-----CCCceEEEEeccc
Q 022418          106 HNQLDIMYNNAGVACKTPR---------SIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIP-----RRSGCILCTASVT  171 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~g~iv~vss~~  171 (297)
                      +|++|++|||||+......         ...+...+.+...+..|+.+.+...+...+.+..     ...+.++.+++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999998732111         0112235567788999999999988888887754     3457888899999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCC
Q 022418          172 GLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHC  251 (297)
Q Consensus       172 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (297)
                      +..+.+.+..|++||++++.+++.++.+++++|||||+|+||+++|++...           +...+......++.++++
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----------~~~~~~~~~~~pl~r~~~  230 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----------QETQEEYRRKVPLGQSEA  230 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----------HHHHHHHHTTCTTTSCCB
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----------HHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999999999999999999999999999986532           222333444455545568


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          252 EPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       252 ~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                      +|||+|++++||+++.+.|+|||+|.+|||+++.+
T Consensus       231 ~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         231 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            99999999999999999999999999999998864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.3e-40  Score=285.19  Aligned_cols=223  Identities=17%  Similarity=0.159  Sum_probs=185.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHH---HCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHH--Hc
Q 022418           34 EKVALITGAASGIGKATAAKFI---SNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTIS--KH  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~---~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~--~~  106 (297)
                      -|+||||||++|||+++|++|+   ++|++|++++|+.+++++..+..  +.++.++.||++|+++++++++.+.+  .+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            4899999999999999999996   57999999999999887665332  57899999999999999999998854  67


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-----------CCceEEEEeccccccc
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-----------RSGCILCTASVTGLLG  175 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~g~iv~vss~~~~~~  175 (297)
                      +++|+||||||+.. ....+.+.+.++|++.+++|+.+++.++++++|+|+++           ..|++|+++|..+...
T Consensus        82 ~~iDiLvnNAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAP-KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GCCSEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCcceEEeeccccc-cCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            89999999999864 34457788999999999999999999999999999642           4689999999987643


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCC
Q 022418          176 ---GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCE  252 (297)
Q Consensus       176 ---~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (297)
                         .+.+.+|++||+|++.|+++++.|++++||+||+|+||+|+|+|.....                         ..+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-------------------------~~~  215 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-------------------------PLD  215 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-------------------------SBC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-------------------------CCC
Confidence               4456789999999999999999999999999999999999999875321                         123


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          253 PNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       253 ~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      +++.++.++.++.......||+.|.+||+.
T Consensus       216 ~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         216 VPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             chHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            444444444444444456799999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=289.28  Aligned_cols=217  Identities=24%  Similarity=0.292  Sum_probs=186.9

Q ss_pred             CC-EEEEEcCCCcHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EK-VALITGAASGIGKATAAKFISN-GAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k-~vlVtGas~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      || ++|||||++|||+++|++|+++ |++|++++|+.+++++..+++   +.++.+++||++|.++++++++++.+++|+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            44 5599999999999999999986 899999999999998887776   568899999999999999999999999999


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-------------
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-------------  175 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-------------  175 (297)
                      +|+||||||+.  ......+.+.++|++.+++|+.+++.++++++|.|++  .|++|++||..+..+             
T Consensus        82 iDiLVnNAGi~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~  157 (275)
T d1wmaa1          82 LDVLVNNAGIA--FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFR  157 (275)
T ss_dssp             EEEEEECCCCC--CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             cEEEEEcCCcC--CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhc
Confidence            99999999987  4555677788999999999999999999999999964  489999999876432             


Q ss_pred             ----------------------------CCCCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCCccCcchhhH
Q 022418          176 ----------------------------GLAQHTYSVSKSAIIGLVKSMAAELCE----YGIRINCISPFAIPTPFVMEE  223 (297)
Q Consensus       176 ----------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~pG~v~t~~~~~~  223 (297)
                                                  ..+..+|+.||+++..|++.+++++++    .||+||+|+||+|+|+|... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~-  236 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-  236 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC-
Confidence                                        123357999999999999999999875    48999999999999998643 


Q ss_pred             HHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh--cCCCCcccccEEEecC
Q 022418          224 MSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA--SDDAKYVSGHNLVVDG  280 (297)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~--~~~~~~~tG~~i~vdg  280 (297)
                                              ....+|+|.|+.+++++  .++....+|+.+. |.
T Consensus       237 ------------------------~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         237 ------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             ------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             ------------------------cccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                                    22347999999999986  4556778898876 44

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-40  Score=282.26  Aligned_cols=222  Identities=14%  Similarity=0.153  Sum_probs=184.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC--C
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN--Q  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g--~  108 (297)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+..+.+++++.+|++++++++++++++.+.++  +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            569999999999999999999999996  688899999999888776677899999999999999999999998876  4


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-----------CCceEEEEeccccccc--
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-----------RSGCILCTASVTGLLG--  175 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~g~iv~vss~~~~~~--  175 (297)
                      +|+||||||+.. ....+.+.+.++|++.+++|+.+++.++++++|+|+++           ..++++++++..+...  
T Consensus        82 idilinnAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          82 LSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCEEEECCCCCC-CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             eEEEEEcCcccC-CCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            999999999864 34557788999999999999999999999999999642           3478899888766543  


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCC
Q 022418          176 -----GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTH  250 (297)
Q Consensus       176 -----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (297)
                           ..+..+|++||+|+.+|++.++.|++++||+||+|+||+|+|+|...                         ...
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-------------------------~~~  215 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------NAA  215 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-------------------------CCC
Confidence                 23345799999999999999999999999999999999999998642                         123


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 022418          251 CEPNDIANAALYLASDDAKYVSGHNLVVDG  280 (297)
Q Consensus       251 ~~~~dia~~~~~l~~~~~~~~tG~~i~vdg  280 (297)
                      .+|||.++.++.++.......+|+.+..||
T Consensus       216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            479999999999998777778999888775

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.3e-40  Score=278.79  Aligned_cols=224  Identities=14%  Similarity=0.129  Sum_probs=189.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH--NQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~--g~id  110 (297)
                      +||++|||||++|||++++++|+++|++|++++++....       ......+.+|.++.++.+.+.+.+.+.+  +++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            589999999999999999999999999999999876531       2334566788888888888888887754  4799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHH
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAII  190 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  190 (297)
                      +||||||... ......+.+.++|++.+++|+.+++.++++++|+|++  .|++|++||..+..+.+.+.+|++||+|++
T Consensus        74 ~lInnAG~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          74 AILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             EEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCcccc-cccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            9999999653 3334556778999999999999999999999999964  599999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          191 GLVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       191 ~~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .|+++++.|++  +.||+||+|+||+++|+|.+...+..                  ...++.+|+++|+.+.+|+++..
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~------------------~~~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA------------------DFSSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS------------------CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc------------------hhhcCCCHHHHHHHHHHHhCCCc
Confidence            99999999998  57999999999999999876543210                  01456789999999999999999


Q ss_pred             CcccccEEEe--cCCccc
Q 022418          269 KYVSGHNLVV--DGGFTS  284 (297)
Q Consensus       269 ~~~tG~~i~v--dgG~~~  284 (297)
                      .++||+.+.|  ++|++.
T Consensus       213 ~~i~G~~i~v~~~~g~t~  230 (236)
T d1dhra_         213 RPNSGSLIQVVTTDGKTE  230 (236)
T ss_dssp             CCCTTCEEEEEEETTEEE
T ss_pred             cCCCCCeEEEEEECCEEE
Confidence            9999997766  555553

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=275.65  Aligned_cols=215  Identities=20%  Similarity=0.197  Sum_probs=189.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .|+||++||||||+|||+++|++|+++|++|++++|+.+.+++..+++    +..+..+.+|+++.+.+....+.+.+.+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            399999999999999999999999999999999999999998887664    5678889999999999999999999999


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +.+|+++||||..  ....+.+.+.++|++++++|+.+++.+++.++|.|++ +.|++|++||.++..+.+.+.+|++||
T Consensus        91 g~~~~li~nag~~--~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asK  167 (269)
T d1xu9a_          91 GGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK  167 (269)
T ss_dssp             TSCSEEEECCCCC--CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             CCccccccccccc--cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHH
Confidence            9999999999987  5666888899999999999999999999999999974 569999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcc--CCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          187 SAIIGLVKSMAAELCE--YGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       187 ~a~~~~~~~la~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +|+++|+++|+.|+++  .||+||+|+||+|+|++.........                  .....+||++|+.++...
T Consensus       168 aal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~------------------~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         168 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV------------------HMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG------------------GGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc------------------cccCCCHHHHHHHHHHHh
Confidence            9999999999999874  57999999999999998764432110                  022356899998888765


Q ss_pred             cC
Q 022418          265 SD  266 (297)
Q Consensus       265 ~~  266 (297)
                      ..
T Consensus       230 ~~  231 (269)
T d1xu9a_         230 AL  231 (269)
T ss_dssp             HT
T ss_pred             hc
Confidence            43

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.4e-38  Score=265.81  Aligned_cols=217  Identities=18%  Similarity=0.171  Sum_probs=179.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH--HcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS--KHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~--~~g~id~  111 (297)
                      .++||||||++|||++++++|+++|++|++++|+.+..       ........+|..+.+......+.+..  +++++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            35679999999999999999999999999999987531       12344566788888888777777766  4589999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      ||||||... ......+.+.++|+.++++|+.+++.++++++|+|++  .|++|++||..+..+.+.+.+|++||+|+++
T Consensus        75 linnAG~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          75 VFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCcccc-cccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            999999763 2223445557889999999999999999999999964  5899999999999999999999999999999


Q ss_pred             HHHHHHHHHc--cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH-HhcCCC
Q 022418          192 LVKSMAAELC--EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALY-LASDDA  268 (297)
Q Consensus       192 ~~~~la~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~-l~~~~~  268 (297)
                      |+++++.|++  +.+|+||+|+||+++|++.+...+.    .              ...++.+|+|+++.+++ +.++..
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----~--------------~~~~~~~~~~va~~~~~~l~~~~~  213 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----A--------------DHSSWTPLSFISEHLLKWTTETSS  213 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----C--------------CGGGCBCHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----C--------------ccccCCCHHHHHHHHHHHhcCccc
Confidence            9999999998  4689999999999999987654321    0              11456789999999875 455567


Q ss_pred             CcccccEEEe
Q 022418          269 KYVSGHNLVV  278 (297)
Q Consensus       269 ~~~tG~~i~v  278 (297)
                      .++||+.+.|
T Consensus       214 ~~~tG~~i~v  223 (235)
T d1ooea_         214 RPSSGALLKI  223 (235)
T ss_dssp             CCCTTCEEEE
T ss_pred             cCCCceEEEE
Confidence            7899999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.3e-37  Score=267.42  Aligned_cols=221  Identities=26%  Similarity=0.364  Sum_probs=167.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc-CCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH-NQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~-g~id~li  113 (297)
                      |++|||||++|||+++|++|+++|++|++++|++++              ..+|+++.+...........+. +.+|+++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            899999999999999999999999999999998642              3579999998888776665554 5799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-------------------
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-------------------  174 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-------------------  174 (297)
                      ||||+..  .       .+.+.....+|..+...+.+...+.+.........++++.....                   
T Consensus        68 ~~Ag~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  138 (257)
T d1fjha_          68 LCAGLGP--Q-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK  138 (257)
T ss_dssp             ECCCCCT--T-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred             EcCCCCC--c-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence            9999762  1       13367778999999999999999988776666666666543321                   


Q ss_pred             --------c-CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCC
Q 022418          175 --------G-GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGV  245 (297)
Q Consensus       175 --------~-~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (297)
                              + .+...+|++||+|+++|+|+++.||+++|||||+|+||+++|++.+.....       +...+.......
T Consensus       139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~~~~~~~~~  211 (257)
T d1fjha_         139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-------PRYGESIAKFVP  211 (257)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------CCC
T ss_pred             EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-------HHHHHHHHhcCC
Confidence                    1 112346999999999999999999999999999999999999988655422       111222222222


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      +.+|+++|+|+|+++.||+++.+.|+|||+|.+|||++..
T Consensus       212 PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav  251 (257)
T d1fjha_         212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence            3499999999999999999999999999999999999753

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.3e-30  Score=223.83  Aligned_cols=221  Identities=17%  Similarity=0.172  Sum_probs=171.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA-KVVIADIQH---QLGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~---~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..++   .+.++.++.||++|+++++++++.+.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            46999999999999999999999999 588899874   334444443   3678999999999999999999987654 


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                      +++|.+|||+|..  ....+.+.+.++|++.+++|+.+++++.+++.    ..+.+++|++||..+..+.+.+..|+++|
T Consensus        88 ~~i~~vv~~ag~~--~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          88 VPLSAVFHAAATL--DDGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             SCEEEEEECCCCC--CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             ccccccccccccc--cccccccccHHHHHHHhhhhccchhHHHHHhh----ccCCceEeeecchhhccCCcccHHHHHHH
Confidence            5899999999988  66778999999999999999999998877643    35678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ++++.|++.++    ..|+++++|+||++.++.+....           .........   -..++|+++++.+..++..
T Consensus       162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~-----------~~~~~~~~G---~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGP-----------VADRFRRHG---VIEMPPETACRALQNALDR  223 (259)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC-----------------------CTTTT---EECBCHHHHHHHHHHHHHT
T ss_pred             HhHHHHHHHHH----hCCCCEEECCCCcccCCccccch-----------HHHHHHhcC---CCCCCHHHHHHHHHHHHhC
Confidence            99998877654    45999999999999876442211           000000000   1246899999999999865


Q ss_pred             CCCcccccEEEecCC
Q 022418          267 DAKYVSGHNLVVDGG  281 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG  281 (297)
                      ..  ....++.+|..
T Consensus       224 ~~--~~~~v~~~d~~  236 (259)
T d2fr1a1         224 AE--VCPIVIDVRWD  236 (259)
T ss_dssp             TC--SSCEECEECHH
T ss_pred             CC--ceEEEEeCcHH
Confidence            42  34456666644

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=5.5e-24  Score=190.36  Aligned_cols=228  Identities=14%  Similarity=0.113  Sum_probs=162.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHH---HhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQQTAK---ELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~~~~~---~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |+||||||||.||.+++++|.++|++|++++|....     .+....   ....++.++++|++|.+++.++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            899999999999999999999999999999996432     222211   12467899999999999999999876    


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------c
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------G  175 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------~  175 (297)
                       .+|+++|.|+...  .    ..+.++....+++|+.++.++++++...-. +...++|++||....-           +
T Consensus        78 -~~d~v~h~aa~~~--~----~~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 -QPDEVYNLGAMSH--V----AVSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             -CCSEEEECCCCCT--T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             -CCCEEEEeecccc--c----chhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence             7999999999762  1    233455678899999999999999876432 2345799999865321           1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH-HhhcCCCHHHHHHHHHh--------cCCC
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS-QIYAGVDASRLLELVYS--------TGVL  246 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~  246 (297)
                      ..+...|+.||.+.|.+++.+++.   +++++..++|+.+++|....... ...    ...+.....+        ....
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~vyGp~~~~~~~~~~i----~~~~~~~~~~~~~~~~~g~~~~  222 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRES---YGMYACNGILFNHESPRRGETFVTRKI----TRAIANIAQGLESCLYLGNMDS  222 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHTTSCCCEEESCTTC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHH---hCCCEEEEEeccccCCCCCcCCCchHH----HHHHHHHHhCCCceEEECCCCe
Confidence            224568999999999999999887   57999999999999985322110 000    1111111111        1112


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      .+.+++++|+|++++.+++..    .|+.+++.+|....
T Consensus       223 ~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~s  257 (357)
T d1db3a_         223 LRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQYS  257 (357)
T ss_dssp             EECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCEE
T ss_pred             eecceeechHHHHHHHHHhCC----CCCeEEECCCCcee
Confidence            245899999999999888654    57888988877754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.1e-20  Score=165.51  Aligned_cols=234  Identities=18%  Similarity=0.177  Sum_probs=163.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~----~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |.+|||||+|.||+++++.|+++|++|++++|...    ...........++.++++|++|.+.+.++++..     ++|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            56999999999999999999999999999987332    222222223568999999999999999888864     799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------CCC
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------GLA  178 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------~~~  178 (297)
                      +|||+|+..      ..+.+.++..+.+++|+.++..+++++...    +-.++|++||.....+            ..+
T Consensus        76 ~ViHlAa~~------~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          76 TVIHFAGLK------AVGESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEEECCSCC------CHHHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEEECCCcc------chhhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCC
Confidence            999999854      112344566789999999999999998764    3357899888765422            124


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHH---HHHHHHHhc------------
Q 022418          179 QHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDAS---RLLELVYST------------  243 (297)
Q Consensus       179 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~------------  243 (297)
                      ...|+.+|.+.+.+.+....+.  .++.+..++|+.+.++.....+..........   .+.......            
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~  223 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSS
T ss_pred             cchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcc
Confidence            5689999999999998877663  47899999999999875432211100000000   111111110            


Q ss_pred             ---CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          244 ---GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       244 ---~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                         ....+.+++++|++.+...+.........++++++.++....
T Consensus       224 ~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  268 (338)
T d1udca_         224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred             cCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence               011244688999998777765543344567889998887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=3.1e-19  Score=160.88  Aligned_cols=220  Identities=11%  Similarity=-0.004  Sum_probs=153.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc--------------------hhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQH--------------------QLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~--------------------~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      ||+||||||||.||.+++++|+++|++|+++|.-.                    +.+.......+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            78999999999999999999999999999987311                    1112222223567999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      .++++++..     ++|+|||.|+...   ......+.+.....+++|+.++.+++.++...-   ...++++.||....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~---~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRS---APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCC---HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheeccccccc---cccccccccccccccccccccccHHHHHHHHhc---cccceeeccccccc
Confidence            999999876     7999999998652   113335567788899999999999999887642   22345556554432


Q ss_pred             c------------------------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH--Hh
Q 022418          174 L------------------------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS--QI  227 (297)
Q Consensus       174 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~  227 (297)
                      .                        +..+...|+.+|.+.|.+++.++++   .++++..++|+.+.++.......  ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~~~~~~~~~~~~  226 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVKTDETEMHEEL  226 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCCCcccccccccc
Confidence            1                        1123346999999999999988877   68999999999999875432110  00


Q ss_pred             hcC---------CCHHHHHHHHH-------hcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          228 YAG---------VDASRLLELVY-------STGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       228 ~~~---------~~~~~~~~~~~-------~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ...         ...........       +.....+.+++++|+++++..+++..
T Consensus       227 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~  282 (393)
T d1i24a_         227 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP  282 (393)
T ss_dssp             CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhh
Confidence            000         00111111111       11222356789999999999998654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.83  E-value=3.1e-21  Score=172.62  Aligned_cols=226  Identities=17%  Similarity=0.147  Sum_probs=161.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEE-EEeCCchhH-HHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLG-QQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi-~~~r~~~~~-~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+||||||+|.||++++++|++.|++|+ ++++..... ....+.+  ..++.++.+|++|.+.+.++++..     ++|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            5799999999999999999999999854 455432211 1111112  357899999999999999988865     799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-----CCceEEEEeccccccc----------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-----RSGCILCTASVTGLLG----------  175 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~vss~~~~~~----------  175 (297)
                      +|||+|+...      ...+.++..+.+++|+.++..+++++...-...     +..++|++||......          
T Consensus        76 ~VihlAa~~~------~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          76 AVMHLAAESH------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCC------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECccccc------hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            9999998641      123345567899999999999999987754321     2357999998764421          


Q ss_pred             -----------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHHh
Q 022418          176 -----------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVYS  242 (297)
Q Consensus       176 -----------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~  242 (297)
                                 ..+...|+.||.+.|.+++.++..   .|+++..++|+.+++|....  ...        ..+.....+
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~---~~i~~~~lR~~~vyGp~~~~~~~i~--------~~i~~~~~g  218 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT---YGLPTIVTNCSNNYGPYHFPEKLIP--------LVILNALEG  218 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHHH--------HHHHHHHHT
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEecCceECcCCCcCcHHH--------HHHHHHHcC
Confidence                       123456999999999999999877   57999999999999985421  111        111222222


Q ss_pred             c-------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          243 T-------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       243 ~-------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      .       ....+.+++++|+|+++..++....   .|..+++.+|....
T Consensus       219 ~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~s  265 (361)
T d1kewa_         219 KPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEKK  265 (361)
T ss_dssp             CCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             CCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCcc
Confidence            1       1122347899999999999987652   47899998876543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.1e-19  Score=161.00  Aligned_cols=215  Identities=13%  Similarity=0.066  Sum_probs=150.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-----HH----HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-----GQ----QTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-----~~----~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++|||||+|.||.+++++|.++|++|++++|..+.     ++    ........++.++.+|++|++.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            445999999999999999999999999999996532     11    122222457899999999999999999876   


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc-----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL-----------  174 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~-----------  174 (297)
                        .+++++|.++..      ....+.+.....+++|+.++.+++.++...-.. +..++|++||.....           
T Consensus        79 --~~~~v~~~~a~~------~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 --KPTEIYNLGAQS------HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             --CCSEEEECCSCC------CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --ccceeeeeeecc------ccchhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCC
Confidence              788999999865      222345666778899999999999998765432 335799998865321           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHH-------hcCCC
Q 022418          175 GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVY-------STGVL  246 (297)
Q Consensus       175 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~  246 (297)
                      +..+...|+.||.+.|.+++.++..   +++.+..++|+.+++|..... .....   ..........       +....
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~---~~~i~~~~~~~~~~~~~g~g~~  223 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKI---SRSVAKIYLGQLECFSLGNLDA  223 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHHTSCSCEEESCTTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCcccccc---ceeeehhhcCCcceeecCCCcc
Confidence            1224567999999999999998777   578999999999998743211 10000   0001111111       11112


Q ss_pred             CCCCCCHHHHHHHHHHHhcCC
Q 022418          247 EGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~  267 (297)
                      .+.+++++|+++++..++...
T Consensus       224 ~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         224 KRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS
T ss_pred             eeeeeEecHHHHHHHHHhhcC
Confidence            246889999999999998764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=2.9e-21  Score=157.58  Aligned_cols=152  Identities=13%  Similarity=0.152  Sum_probs=111.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+++||+++||||++|||+++++.|+++|++|++++|+.+++++..+.+  ..++....+|+++.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            46899999999999999999999999999999999999999988877766  234567889999999887765       


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-CCCCccchhh
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-GLAQHTYSVS  185 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-~~~~~~Y~~s  185 (297)
                      +++|+||||||..      +...+.++|++.+++|+.+.++....+.+.+.... .....+++.....+ ..+...|+.+
T Consensus        91 ~~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 KGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             TTCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             cCcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHH
Confidence            4789999999965      33568899999999998877765443333222211 12222222222111 1123469999


Q ss_pred             HHHHHHHHH
Q 022418          186 KSAIIGLVK  194 (297)
Q Consensus       186 K~a~~~~~~  194 (297)
                      |+++..+++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999887664

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=2.3e-20  Score=163.60  Aligned_cols=225  Identities=16%  Similarity=0.139  Sum_probs=157.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-QQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      |+||||||||.||++++++|.++|++|++++|..... ....+.+  ..++.++.+|++|.+.+.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999999865431 1222333  346889999999999999888876     6788


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------CCCC
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------GLAQ  179 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------~~~~  179 (297)
                      ++|+++...      .....+.....++.|+.++.+++.++...-   ...++++.|+. ...+            ..+.
T Consensus        76 ~~~~a~~~~------~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~---~~~~~i~~Ss~-~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSF------VGASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTS-EMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCC------HHHHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEG-GGGCSCSSSSBCTTSCCCCC
T ss_pred             ccccccccc------ccccccchHHHHhhhhhchHHHHHHHHHhC---CCcccccccch-hhcCcccCCCCCCCCCcccc
Confidence            888887541      112223457889999999999999886632   22345555554 3332            2245


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH-HHHhhcCCCHHHHHHHHHhc--------CCCCCCC
Q 022418          180 HTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE-MSQIYAGVDASRLLELVYST--------GVLEGTH  250 (297)
Q Consensus       180 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  250 (297)
                      ..|+.+|.+.|.+++.++.+   +++++..++|+.+++|..... .....    ...+.....+.        ....+.+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~~~~~~~~~~i----~~~~~~~~~~~~~~i~~g~g~~~r~~  218 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKV----TDAVARIKLGKQQELRLGNVDAKRDW  218 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCCccccccHHHH----HHHHHHHHhCCCCcEEECCCCeEEcc
Confidence            78999999999999999877   578999999999988753211 11000    01111111111        1122357


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          251 CEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       251 ~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ++++|+|+++..++...    .+..+++.+|....
T Consensus       219 i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s  249 (321)
T d1rpna_         219 GFAGDYVEAMWLMLQQD----KADDYVVATGVTTT  249 (321)
T ss_dssp             EEHHHHHHHHHHHHHSS----SCCCEEECCSCEEE
T ss_pred             EEeHHHHHHHHHHHhcC----CcCCceecccccce
Confidence            99999999999998665    24567777776554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=1.9e-19  Score=158.80  Aligned_cols=216  Identities=16%  Similarity=0.098  Sum_probs=150.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch-----hHHHH---HHHh-CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ-----LGQQT---AKEL-GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~-----~~~~~---~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      .|++|||||||.||++++++|+++|++|++++|..+     +.+..   .... ...+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            489999999999999999999999999999998543     11111   1111 346788999999999999988865  


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEecccccc---------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTASVTGLL---------  174 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vss~~~~~---------  174 (297)
                         ++|++||.|+...      ...+.+.....++.|+.++..++.++........ ..++++.||.....         
T Consensus        79 ---~~D~Vih~Aa~~~------~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~  149 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSH------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  149 (339)
T ss_dssp             ---CCSEEEECCSCCC------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ---ccchhhhcccccc------ccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence               8999999998652      1233456778999999999998888865443322 23455555443221         


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHH-HhhcCCCHHHHHHHHHh--------cC
Q 022418          175 -GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMS-QIYAGVDASRLLELVYS--------TG  244 (297)
Q Consensus       175 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~  244 (297)
                       +..+...|+.+|.+.|.+++.+.+.   +++.+..++|+.|++|....... ...    .........+        ..
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i----~~~~~~~~~~~~~~~~~g~~  222 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKI----TRALGRIKVGLQTKLFLGNL  222 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchh----hHHHHHHhcCCCCeEEeCCC
Confidence             1234578999999999999998877   57999999999999985432110 000    0111111111        11


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCC
Q 022418          245 VLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       245 ~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ...+.+++++|+|+++..++...
T Consensus       223 ~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         223 QASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CccccceeeehHHHHHHHHHhcC
Confidence            12245789999999999998765

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.8e-18  Score=153.09  Aligned_cols=235  Identities=14%  Similarity=0.123  Sum_probs=161.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQH----------QLGQQTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~----------~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      |+||||||||.||.+++++|+++|++|+++++..          +..+........++.++.+|++|.+.+.+++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            7899999999999999999999999999986421          1222222223678999999999999998888754  


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------  175 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------  175 (297)
                         .+|+++|.|+...      ...+.++..+.+++|+.++..+++++..    .+-.++++.||......         
T Consensus        81 ---~~~~i~h~Aa~~~------~~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKA------VGESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             ---CEEEEEECCSCCC------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---ccccccccccccC------cHhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccccccc
Confidence               7889999998652      1233455678899999999999988765    34457888887655422         


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCC---HHHHHHHHHhc------
Q 022418          176 ---GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVD---ASRLLELVYST------  243 (297)
Q Consensus       176 ---~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~------  243 (297)
                         ..+...|+.+|.+.+...+.+++.  ..+.....++|+.++++..............   -..+.......      
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  225 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEE
Confidence               123457999999999998877654  2578899999988887643211100000000   01111111110      


Q ss_pred             ---------CCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 022418          244 ---------GVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       244 ---------~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~  286 (297)
                               ....+++++++|+|.++..++........++++++.+|....-
T Consensus       226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~  277 (346)
T d1ek6a_         226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSV  277 (346)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEH
T ss_pred             cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccH
Confidence                     0112457999999999888765544455788999998877653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=9.7e-19  Score=154.58  Aligned_cols=226  Identities=15%  Similarity=0.116  Sum_probs=157.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      |+||||||||.||++++++|+++| ++|+++++.........+  ..++.++++|+++.+++.+.+..      ++|++|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~~------~~d~Vi   72 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK------KCDVVL   72 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH------HCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHHh------CCCccc
Confidence            579999999999999999999999 479999887654443322  46799999999988776553321      489999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC-----------------
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG-----------------  176 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~-----------------  176 (297)
                      |+|+...      .....+.....+++|+.++.++++++...     ..+.++.||.......                 
T Consensus        73 h~a~~~~------~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          73 PLVAIAT------PIEYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             ECBCCCC------HHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             ccccccc------ccccccCCccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccc
Confidence            9999762      11234455678999999999999998652     2456676665543221                 


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcC--CCHHHHHHHHHh-------cCCC
Q 022418          177 -LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAG--VDASRLLELVYS-------TGVL  246 (297)
Q Consensus       177 -~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~  246 (297)
                       .+...|+.||.+.|.+++.+++.   .|+++..++|..+.++............  .....+.....+       ....
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  218 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  218 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC
T ss_pred             CCCcchhhhcccchhhhhhhhhcc---cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCe
Confidence             13357999999999999999888   5899999999999887443221100000  001111222221       1223


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGF  282 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~  282 (297)
                      .+.+++++|+|+++..++........|+++++.+|.
T Consensus       219 ~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~  254 (342)
T d2blla1         219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (342)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             eeeecccccccceeeeehhhccccCCCeEEEEeccc
Confidence            345899999999999999875445568999996553

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.78  E-value=2.2e-18  Score=152.53  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=153.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .+||+||||||+|.||.+++++|.++|++|+++.|+.++.....+..     ......+..|++|.+++.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            45899999999999999999999999999999999887655543322     2334557789999988776664      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------  176 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------  176 (297)
                       .+|.++|+++...      ...+   ....+..|+.++.++++.+...   .+-.++|++||..+....          
T Consensus        83 -~~~~v~~~a~~~~------~~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 -GAAGVAHIASVVS------FSNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             -TCSEEEECCCCCS------CCSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             -cchhhhhhccccc------cccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcccc
Confidence             6899999998652      1222   3456788999999999887652   235689999987643211          


Q ss_pred             ---------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHH
Q 022418          177 ---------------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASR  235 (297)
Q Consensus       177 ---------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~  235 (297)
                                           .+...|+.+|.+.|.+++.++++.. .++++..++|+.+.+|........   ......
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~---~~~~~~  225 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQS---GSTSGW  225 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCC---CHHHHH
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccc---cchHHH
Confidence                                 1224699999999999999888754 468888899988877643211000   000011


Q ss_pred             HHHHHHh------cCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 022418          236 LLELVYS------TGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       236 ~~~~~~~------~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG  281 (297)
                      ......+      .....+.+++++|+|++++..+....  ..|+.+...++
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~  275 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAG  275 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCE
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCC
Confidence            1111111      11122457899999999887776542  35666655444

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.7e-19  Score=157.91  Aligned_cols=221  Identities=16%  Similarity=0.147  Sum_probs=150.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|+||||||+|.||++++++|.++|++|++++|....-.+.....  ..++.....|+.+.     +       ..++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~-------~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----L-------YIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----C-------CCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-----H-------HcCCCE
Confidence            378999999999999999999999999999987432211111111  23455555555432     1       236999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------------
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------------  175 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------------  175 (297)
                      |||+|+...  ..    .+.++..+.+++|+.++.++++++...    + .++|++||.+....                
T Consensus        69 VihlAa~~~--~~----~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          69 IYHLASPAS--PP----NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             EEECCSCCS--HH----HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EEECcccCC--ch----hHHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            999998652  11    112345678899999999999987653    2 37999998654421                


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhc-------CCCCC
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYST-------GVLEG  248 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  248 (297)
                      ..+...|+.+|.+.|.+++.++.+   +|+++..++|+.+++|.........    ....+.....+.       ....+
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~----i~~~i~~~~~g~~i~i~~~g~~~r  210 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGRV----VSNFILQALQGEPLTVYGSGSQTR  210 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCCH----HHHHHHHHHHTCCEEEESSSCCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHH---hCCcEEEEEeeeEECCCCCCCCccH----HHHHHHHHHcCCCeEEeCCCCeeE
Confidence            124567999999999999999888   5899999999999997543211000    011122222221       12224


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          249 THCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       249 ~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      .+++.+|++++++.++...    .+..+++.+|.+....+
T Consensus       211 ~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~~~~  246 (312)
T d2b69a1         211 AFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHTILE  246 (312)
T ss_dssp             ECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEEHHH
T ss_pred             ccEEHHHHHHHHHHHHhhc----cCCceEecCCcccchhh
Confidence            6889999999999998654    45678998887765433

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1e-19  Score=162.40  Aligned_cols=229  Identities=15%  Similarity=0.083  Sum_probs=160.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++|+||||||||.||++++++|.++|++|+++++.......  .. .....+..+|+.+.+.+.++++       .+|.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~V   83 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED-MFCDEFHLVDLRVMENCLKVTE-------GVDHV   83 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG-GTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh-cccCcEEEeechhHHHHHHHhh-------cCCeE
Confidence            77889999999999999999999999999999876542110  01 1345778899999888766654       68999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------------
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------------  175 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------------  175 (297)
                      ||.|+...  .   .....+.....+..|+.++..++.++..    .+..++|++||......                 
T Consensus        84 ih~a~~~~--~---~~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          84 FNLAADMG--G---MGFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             EECCCCCC--C---HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             eecccccc--c---ccccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccccccCC
Confidence            99998662  1   1112344677889999999999999866    34457999999766431                 


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHH-HHHh-------cCCC
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLE-LVYS-------TGVL  246 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~  246 (297)
                       ..+...|+.+|.+.|.+++.+.++   .|+++..++|+.++++........  .......... ....       ....
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~---~gl~~~ilR~~~vyG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCCSSSC--CCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEeccCCcccccc--cccccccccccccccccccccCCCCe
Confidence             123467999999999999998877   589999999999998743110000  0000000001 1111       0112


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCCC
Q 022418          247 EGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLK  289 (297)
Q Consensus       247 ~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~  289 (297)
                      .+.+++.+|+++++..++...    .|..+++.+|......+.
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~~~l  268 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEM  268 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEHHHH
T ss_pred             EEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccHHHH
Confidence            356899999999999998654    567899988877664433

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=6.3e-18  Score=149.78  Aligned_cols=168  Identities=18%  Similarity=0.179  Sum_probs=128.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ----LGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~----~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      |+||||||||.||++++++|+++|++|+++++...    ...........++.++.+|++|.++++++++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            78999999999999999999999999999876332    112222223567899999999999999988754     799


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc---------------
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG---------------  175 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~---------------  175 (297)
                      ++||+|+...      .....+.......+|+.++.+++.++...    +-.++|++||......               
T Consensus        77 ~VihlAa~~~------~~~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          77 SVIHFAGLKA------VGESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             EEEECCSCCC------HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             EEEEcccccc------ccccccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCccccccC
Confidence            9999998651      11234455778899999999999998653    3347999999665421               


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCc
Q 022418          176 GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTP  218 (297)
Q Consensus       176 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~  218 (297)
                      ..+...|+.+|.+.|.+++.+.... ..++++..++|+.+.++
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence            1234579999999999999887642 24788888888777764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=7.4e-18  Score=148.89  Aligned_cols=231  Identities=18%  Similarity=0.131  Sum_probs=161.9

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL----GQQTAKEL----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~----~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+.|++|||||||.||++++++|.++|++|++++|....    .+......    ..++.++.+|+.|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            456899999999999999999999999999999873321    11111111    2568899999999877654433   


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccc---------
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLL---------  174 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~---------  174 (297)
                          ..+.++|.+...      ....+.++....+++|+.++.++++++...    +..++|++||.....         
T Consensus        91 ----~~~~v~~~~a~~------~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          91 ----GVDYVLHQAALG------SVPRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             ----TCSEEEECCSCC------CHHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----cccccccccccc------cccccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCccC
Confidence                678888888754      112356777889999999999999998762    345899999876542         


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh-------cCC
Q 022418          175 --GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS-------TGV  245 (297)
Q Consensus       175 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  245 (297)
                        +..+...|+.+|.+.|.+++.+++.   .++++..++|+.+.++.......  ....-.........+       ...
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~v~G~~~~~~~~--~~~~i~~~~~~~~~g~~i~~~g~g~  231 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRC---YGFSTIGLRYFNVFGRRQDPNGA--YAAVIPKWTSSMIQGDDVYINGDGE  231 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEECCEECTTCCCCST--TCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHH---hCCCeEEEEeceeeccCcCCCCc--hhhhHHHHHHHHHcCCceEEcCCCC
Confidence              1224578999999999999999877   57899999999998864321100  000001111122211       112


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~  285 (297)
                      ..+.+++++|+|.++..++.... ...|+.+++.++....
T Consensus       232 ~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         232 TSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRTS  270 (341)
T ss_dssp             CEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCEE
T ss_pred             EEEEEEEEeccchhhhhhhhccc-cccceeeeecccccch
Confidence            33568999999999998886653 3568888887766554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.76  E-value=1.1e-19  Score=159.60  Aligned_cols=223  Identities=14%  Similarity=0.159  Sum_probs=157.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEE------EEeCCch--hHHHHH-HHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVV------IADIQHQ--LGQQTA-KELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi------~~~r~~~--~~~~~~-~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |+||||||+|.||++++++|+++|+.|.      ..++...  ...... .....++.++.+|.++........      
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc------
Confidence            5799999999999999999999998653      3332211  111111 112457899999999987766443      


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc----------
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG----------  175 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~----------  175 (297)
                       ..+|.++|.|+..      ......+...+.+++|+.++.++++++..    .+..++|+.||.....+          
T Consensus        75 -~~~d~vi~~a~~~------~~~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          75 -RGVDAIVHFAAES------HVDRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             -TTCCEEEECCSCC------CHHHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -cccceEEeecccc------cccccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCC
Confidence             3789999999865      22234455677889999999999999875    33467999988765432          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhh--HHHHhhcCCCHHHHHHHHH-------hcCC
Q 022418          176 -GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVME--EMSQIYAGVDASRLLELVY-------STGV  245 (297)
Q Consensus       176 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~  245 (297)
                       ..+...|+.+|.+.|.+++.++++   .|+++..++|+.+++|....  .+..        .+.....       +...
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~i~~--------~i~~~~~~~~i~v~~~g~  212 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEKLIPL--------FVTNLLDGGTLPLYGDGA  212 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSHHHH--------HHHHHHTTCCEEEETTSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEECcCCCcCcHHHH--------HHHHHHcCCCcEEecCCC
Confidence             224468999999999999999887   58999999999999975321  1111        1111111       1112


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccCC
Q 022418          246 LEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTSFKNL  288 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~  288 (297)
                      ..+.+++++|+|+++..++....   .|+++++.+|.+....+
T Consensus       213 ~~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~e  252 (322)
T d1r6da_         213 NVREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELTNRE  252 (322)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEEHHH
T ss_pred             eEEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccchhHH
Confidence            22457899999999999997653   58899998887765433

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.76  E-value=2.1e-17  Score=148.30  Aligned_cols=237  Identities=15%  Similarity=0.128  Sum_probs=158.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeC---------CchhHHHHHHHh-----------CCCeeEEEecCCC
Q 022418           33 EEKVALITGAASGIGKATAAKFIS-NGAKVVIADI---------QHQLGQQTAKEL-----------GPNATFIACDVTK   91 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r---------~~~~~~~~~~~~-----------~~~v~~~~~D~s~   91 (297)
                      ++|+||||||+|.||++++++|++ .|++|+++|+         ..+..+.....+           ...+.++.+|++|
T Consensus         1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            368899999999999999999986 7899999874         111222222211           2357888999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccc
Q 022418           92 ESDVSDAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVT  171 (297)
Q Consensus        92 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~  171 (297)
                      ++.++++++..    .++|+++|.|+...      .....+.....+++|+.++..++.++..    .+..++++.++..
T Consensus        81 ~~~l~~~~~~~----~~~d~ViH~Aa~~~------~~~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~  146 (383)
T d1gy8a_          81 EDFLNGVFTRH----GPIDAVVHMCAFLA------VGESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHHS----CCCCEEEECCCCCC------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGG
T ss_pred             HHHhhhhhhcc----ceeehhhccccccc------ccccccccccccccccccccccchhhhc----cCCcccccccccc
Confidence            99988888643    57899999998752      1223455677889999999999988875    2334677666655


Q ss_pred             ccc------------------cCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHH-------
Q 022418          172 GLL------------------GGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQ-------  226 (297)
Q Consensus       172 ~~~------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------  226 (297)
                      ...                  +..+...|+.+|.+.+.+++.+...   +|+.+.+++|+.++++........       
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~  223 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGDIGEHYQGSTH  223 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSSCSCCSTTCCS
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccccccccccccch
Confidence            432                  1224568999999999999998877   689999999999998754321110       


Q ss_pred             --------hh----cCCCHHHHHHHHHh-------------cCCCCCCCCCHHHHHHHHHHHhcC------CCCcccccE
Q 022418          227 --------IY----AGVDASRLLELVYS-------------TGVLEGTHCEPNDIANAALYLASD------DAKYVSGHN  275 (297)
Q Consensus       227 --------~~----~~~~~~~~~~~~~~-------------~~~~~~~~~~~~dia~~~~~l~~~------~~~~~tG~~  275 (297)
                              ..    ..............             .....+.+++++|+|++++.+++.      ......+++
T Consensus       224 ~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i  303 (383)
T d1gy8a_         224 LIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSV  303 (383)
T ss_dssp             HHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEE
T ss_pred             hHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccE
Confidence                    00    00000000000000             011124578899999999988752      223446789


Q ss_pred             EEecCCccccc
Q 022418          276 LVVDGGFTSFK  286 (297)
Q Consensus       276 i~vdgG~~~~~  286 (297)
                      +++.+|.....
T Consensus       304 ~Ni~s~~~~s~  314 (383)
T d1gy8a_         304 FNLGTSRGYSV  314 (383)
T ss_dssp             EEESCSCCEEH
T ss_pred             EEeCCCCceeH
Confidence            99988876553

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.76  E-value=5.7e-18  Score=148.65  Aligned_cols=224  Identities=16%  Similarity=0.168  Sum_probs=148.9

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHH-hCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQ--LGQQTAKE-LGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +||||||+|.||++++++|.++|++|+++++-..  ..+..... -..++.++.+|++|.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            5899999999999999999999999999875322  21211111 1457899999999999999998876     79999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------------
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------------  176 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------------  176 (297)
                      ||+|+...      .....++....+++|+.++.++++++...    +..+.++.||.....+.                
T Consensus        77 ih~aa~~~------~~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVA------MTTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCC------HHHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeeccccc------ccccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccccccc
Confidence            99998652      11234456889999999999999988763    33446666665544321                


Q ss_pred             ------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcch-----hhHHHHhhcCCCHHHHHHH
Q 022418          177 ------------LAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV-----MEEMSQIYAGVDASRLLEL  239 (297)
Q Consensus       177 ------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~-----~~~~~~~~~~~~~~~~~~~  239 (297)
                                  .+...|+.+|...+.+.......+   ++....+.|..+..+..     ........     ......
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  218 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFC-----QKAVEI  218 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHH-----HHHHHH
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---Ccccccccccceeeccccccccccccchhh-----HHHHHH
Confidence                        134579999999999998888874   45555555443332211     11111100     000010


Q ss_pred             HH---------hcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 022418          240 VY---------STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFT  283 (297)
Q Consensus       240 ~~---------~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~  283 (297)
                      ..         +.....+.+++++|++++++.+++.. ....|+++++.+|..
T Consensus       219 ~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         219 KNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             HhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence            10         11112245788999999999988654 335788888866543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.75  E-value=7.8e-19  Score=155.65  Aligned_cols=219  Identities=14%  Similarity=0.114  Sum_probs=150.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC--ch-h-HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQ--HQ-L-GQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~--~~-~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      -|.||||||||.||++++++|.++|+.|.++.++  .. . ........+.++.++.+|++|.+.+.++++       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            4789999999999999999999999875444332  11 1 111111225688999999999999888765       56


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--------------
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--------------  175 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--------------  175 (297)
                      |.++|.|+...  .    ..+.++..+.+++|+.++.+++..+...-     .++|++||......              
T Consensus        75 ~~v~~~a~~~~--~----~~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          75 DAIVHYAAESH--N----DNSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             SEEEECCSCCC--H----HHHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhccc--c----cchhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCccccccccccCc
Confidence            88999998662  1    12234557889999999999998876532     46788777654311              


Q ss_pred             ---------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchh--hHHHHhhcCCCHHHHHHHHH---
Q 022418          176 ---------GLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVM--EEMSQIYAGVDASRLLELVY---  241 (297)
Q Consensus       176 ---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~---  241 (297)
                               ..+...|+.+|.+.|.+++.+.++   .++++..++|+.+++|...  ....        ..+.....   
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~~~~~--------~~i~~~~~~~~  212 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIEKFIP--------RQITNILAGIK  212 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTTSHHH--------HHHHHHHHTCC
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCccchhH--------HHHHHHHcCCc
Confidence                     113457999999999999998877   5899999999999997432  1111        11111111   


Q ss_pred             ----hcCCCCCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 022418          242 ----STGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       242 ----~~~~~~~~~~~~~dia~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                          +.....+.+++.+|+|++++.++....   .|..+++.+|...
T Consensus       213 ~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~  256 (346)
T d1oc2a_         213 PKLYGEGKNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGADGEK  256 (346)
T ss_dssp             CEEETTSCCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCSCEE
T ss_pred             eeEeCCCCccccccchhhHHHHHHHHHhhcc---cCccccccccccc
Confidence                112233568999999999998886552   4566666555543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.9e-16  Score=128.02  Aligned_cols=198  Identities=16%  Similarity=0.108  Sum_probs=132.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ..|+++||||||+||++++++|+++|++|+++.|+.+++...   ....+.++.+|++|.+++.++++       +.|++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~gD~~d~~~l~~al~-------~~d~v   71 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDAV   71 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---cccccccccccccchhhHHHHhc-------CCCEE
Confidence            458899999999999999999999999999999998765432   23568899999999999887776       67999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCC----ccchhhHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQ----HTYSVSKSA  188 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~----~~Y~~sK~a  188 (297)
                      |+++|...  ....  .         +++..++.++++++.    +.+-.++|++||..........    ..|...|..
T Consensus        72 i~~~g~~~--~~~~--~---------~~~~~~~~~l~~aa~----~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~  134 (205)
T d1hdoa_          72 IVLLGTRN--DLSP--T---------TVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (205)
T ss_dssp             EECCCCTT--CCSC--C---------CHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             EEEeccCC--chhh--h---------hhhHHHHHHHHHHHH----hcCCCeEEEEeeeeccCCCccccccccccchHHHH
Confidence            99998652  2111  1         123334445555543    3455689999887654332221    234445544


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          189 IIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       189 ~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      .+.+       +...+++.+.|+||.+.......... .             .........+++++|+|+.++.+++.+ 
T Consensus       135 ~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~-~-------------~~~~~~~~~~i~~~DvA~~~~~~l~~~-  192 (205)
T d1hdoa_         135 MHKV-------LRESGLKYVAVMPPHIGDQPLTGAYT-V-------------TLDGRGPSRVISKHDLGHFMLRCLTTD-  192 (205)
T ss_dssp             HHHH-------HHHTCSEEEEECCSEEECCCCCSCCE-E-------------ESSSCSSCSEEEHHHHHHHHHHTTSCS-
T ss_pred             HHHH-------HHhcCCceEEEecceecCCCCcccEE-E-------------eeCCCCCCCcCCHHHHHHHHHHHhCCC-
Confidence            4433       33468999999998886432111000 0             000111255689999999999999765 


Q ss_pred             CcccccEEEecC
Q 022418          269 KYVSGHNLVVDG  280 (297)
Q Consensus       269 ~~~tG~~i~vdg  280 (297)
                      . ..|+.+.+.+
T Consensus       193 ~-~~g~~~~~s~  203 (205)
T d1hdoa_         193 E-YDGHSTYPSH  203 (205)
T ss_dssp             T-TTTCEEEEEC
T ss_pred             C-CCCEEEecCC
Confidence            3 3478776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.70  E-value=2.6e-16  Score=139.23  Aligned_cols=216  Identities=14%  Similarity=0.027  Sum_probs=152.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++||+||||||||.||+++++.|.++|++|++++|+........+..  ...+.++.+|++|++.+.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            68999999999999999999999999999999999876544443332  356899999999999999888866     79


Q ss_pred             cEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc------------CC
Q 022418          110 DIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG------------GL  177 (297)
Q Consensus       110 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~------------~~  177 (297)
                      |+++|.|+..      ....+.+.....+++|+.++..++.++...-   ....+++.|+......            ..
T Consensus        81 ~~v~~~aa~~------~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQP------LVRLSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCC------CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhccc------cccccccCCccccccccccchhhhhhhhccc---cccccccccccccccccccccccccccccC
Confidence            9999999865      2223456678899999999999999887632   2234444444333221            12


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHc------cCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHH------hcCC
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELC------EYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVY------STGV  245 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~------~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  245 (297)
                      +...|+.+|...+.+.+.++.++.      ..++.+..++|+.+++|..... ...    ..........      ....
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~----i~~~~~~~~~~~~~~~~~~~  226 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRI----VPDILRAFEQSQPVIIRNPH  226 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCH----HHHHHHHHHTTCCEECSCTT
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHH----HHHHHHHHhCCCceEEeecc
Confidence            345799999999999998887653      3478999999999988643110 000    0001111111      1111


Q ss_pred             CCCCCCCHHHHHHHHHHHhcC
Q 022418          246 LEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       246 ~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ....+++++|++.++..++..
T Consensus       227 ~~~~~~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         227 AIRPWQHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             CEECCEETHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhhh
Confidence            224567899999998887654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.5e-16  Score=138.66  Aligned_cols=152  Identities=16%  Similarity=0.159  Sum_probs=121.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      .|+||||||||.||++++++|+++|+.|+++++..+                 +|+.+.+.+.++++.-     .+|.++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~~~~~-----~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-----------------LNLLDSRAVHDFFASE-----RIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-----------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-----------------ccccCHHHHHHHHhhc-----CCCEEE
Confidence            578999999999999999999999999887765432                 5999999998887643     799999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccC----------------C
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGG----------------L  177 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~----------------~  177 (297)
                      |+|+...  .   .........+.+++|+.++.++++++...    +-.++|++||.....+.                +
T Consensus        60 ~~a~~~~--~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          60 LAAAKVG--G---IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  130 (315)
T ss_dssp             ECCCCCC--C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             Ecchhcc--c---cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCccccCCCCC
Confidence            9997652  1   11234455677899999999999998663    34579999997754321                1


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcc
Q 022418          178 AQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPF  219 (297)
Q Consensus       178 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~  219 (297)
                      +...|+.+|.+.|.+++.+.++   .|+++..++|+.|++|.
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEESTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEeeccEECCC
Confidence            2346999999999999999887   58999999999999874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.8e-17  Score=134.52  Aligned_cols=199  Identities=14%  Similarity=0.105  Sum_probs=137.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..+++|+||||||||.||++++++|.++|.  +|++++|+.......   ....+....+|+.+.+++.+.+       .
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---~~~~i~~~~~D~~~~~~~~~~~-------~   79 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---AYKNVNQEVVDFEKLDDYASAF-------Q   79 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---GGGGCEEEECCGGGGGGGGGGG-------S
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---ccceeeeeeecccccccccccc-------c
Confidence            457889999999999999999999999996  799999976543221   1235677778888776654444       3


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHH
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKS  187 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  187 (297)
                      ..|+++|++|..         ..........++|+..+..+++.+..    .+-.++|++|+.......  ...|+.+|.
T Consensus        80 ~~d~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~~--~~~Y~~~K~  144 (232)
T d2bkaa1          80 GHDVGFCCLGTT---------RGKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKSS--NFLYLQVKG  144 (232)
T ss_dssp             SCSEEEECCCCC---------HHHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTTC--SSHHHHHHH
T ss_pred             cccccccccccc---------ccccchhhhhhhcccccceeeecccc----cCccccccCCccccccCc--cchhHHHHH
Confidence            689999999854         22345567788999999999888765    445679999987765433  357999999


Q ss_pred             HHHHHHHHHHHHHccCCc-EEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHH
Q 022418          188 AIIGLVKSMAAELCEYGI-RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTG---VLEGTHCEPNDIANAALYL  263 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dia~~~~~l  263 (297)
                      ..|...+.       .+. ++..++||.+.++.......        +.+........   ......++++|+|++++.+
T Consensus       145 ~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~  209 (232)
T d2bkaa1         145 EVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPG--------EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN  209 (232)
T ss_dssp             HHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHH--------HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred             Hhhhcccc-------ccccceEEecCceeecCCCcCcHH--------HHHHHHHhhccCCcccCCCeEEHHHHHHHHHHH
Confidence            88865433       343 57889999999975432110        11111111110   0113457889999999888


Q ss_pred             hcCCC
Q 022418          264 ASDDA  268 (297)
Q Consensus       264 ~~~~~  268 (297)
                      +....
T Consensus       210 ~~~~~  214 (232)
T d2bkaa1         210 VVRPR  214 (232)
T ss_dssp             HTSCC
T ss_pred             HhcCc
Confidence            76553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=9.3e-16  Score=127.51  Aligned_cols=217  Identities=13%  Similarity=0.071  Sum_probs=141.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCe--EEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAK--VVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++||||||||+||++++++|+++|++  |+...|+.++..    .....++++.+|+++.+.+.++++       .+|.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   72 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE----KIGGEADVFIGDITDADSINPAFQ-------GIDAL   72 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH----HTTCCTTEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH----hccCCcEEEEeeeccccccccccc-------cceee
Confidence            79999999999999999999999976  555677765433    345678999999999998887765       68999


Q ss_pred             EECccCCCCCCCc-------cCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          113 YNNAGVACKTPRS-------IVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       113 i~~ag~~~~~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      ||+++........       ........+.....+|+.++..+.......    ..+...+.++.....+..+...+..+
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~  148 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKLGNG  148 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGGGGC
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCCCccccccccc
Confidence            9999875211110       111112334566788999988877766553    34667777776665544433333333


Q ss_pred             HH-HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q 022418          186 KS-AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLA  264 (297)
Q Consensus       186 K~-a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~  264 (297)
                      +. ........+..   ..|+++..++||.+.++.....  .........        .......+++++|+|++++.++
T Consensus       149 ~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~--------~~~~~~~~i~~~Dva~a~~~~l  215 (252)
T d2q46a1         149 NILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVR--ELLVGKDDE--------LLQTDTKTVPRADVAEVCIQAL  215 (252)
T ss_dssp             CHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSS--CEEEESTTG--------GGGSSCCEEEHHHHHHHHHHHT
T ss_pred             chhhhhhhhhhhhh---cccccceeecceEEECCCcchh--hhhhccCcc--------cccCCCCeEEHHHHHHHHHHHh
Confidence            32 22222233333   3689999999999988753211  000000000        0011245789999999999998


Q ss_pred             cCCCCcccccEEEecCC
Q 022418          265 SDDAKYVSGHNLVVDGG  281 (297)
Q Consensus       265 ~~~~~~~tG~~i~vdgG  281 (297)
                      ..+.  ..|+++++.++
T Consensus       216 ~~~~--~~g~~~~i~~~  230 (252)
T d2q46a1         216 LFEE--AKNKAFDLGSK  230 (252)
T ss_dssp             TCGG--GTTEEEEEEEC
T ss_pred             CCcc--ccCcEEEEeeC
Confidence            7643  47899988654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.53  E-value=1.6e-13  Score=116.87  Aligned_cols=197  Identities=18%  Similarity=0.106  Sum_probs=134.8

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +|++|||||||.||++++++|.++|++|+.++|+.                  +|++|.++++++++..     ++|++|
T Consensus         1 ~MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           1 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            36799999999999999999999999999999863                  4999999999888865     789999


Q ss_pred             ECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccc
Q 022418          114 NNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTY  182 (297)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y  182 (297)
                      |+|+...      .+.+.......++.|+.....+........     ..+++.||......           ..+...|
T Consensus        58 h~a~~~~------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          58 NCAAHTA------VDKCEEQYDLAYKINAIGPKNLAAAAYSVG-----AEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             ECCCCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             eeccccc------cccccccchhhccccccccccccccccccc-----ccccccccceeeeccccccccccccccchhhh
Confidence            9998651      123345557778888888887777665532     34555655433221           2234568


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHh-----cCCCCCCCCCHHHHH
Q 022418          183 SVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYS-----TGVLEGTHCEPNDIA  257 (297)
Q Consensus       183 ~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~dia  257 (297)
                      +.+|...+.+.+.       .+.+...++|+.++++..... .        .........     .....+.+++++|++
T Consensus       127 ~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~~  190 (281)
T d1vl0a_         127 GKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFV-K--------TMINLGKTHDELKVVHDQVGTPTSTVDLA  190 (281)
T ss_dssp             HHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHH-H--------HHHHHHHHCSEEEEESSCEECCEEHHHHH
T ss_pred             hhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccc-c--------chhhhhccCCceeecCCceeccchhhhhh
Confidence            8888777665432       356788899999998753211 1        111111111     011225678999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 022418          258 NAALYLASDDAKYVSGHNLVVDGGFTS  284 (297)
Q Consensus       258 ~~~~~l~~~~~~~~tG~~i~vdgG~~~  284 (297)
                      +++..+++...   +| .+++.+|...
T Consensus       191 ~~~~~~~~~~~---~g-~~~~~~~~~~  213 (281)
T d1vl0a_         191 RVVLKVIDEKN---YG-TFHCTCKGIC  213 (281)
T ss_dssp             HHHHHHHHHTC---CE-EEECCCBSCE
T ss_pred             hhhhhhhhhcc---cC-ceeEeCCCcc
Confidence            99999997653   34 5666555444

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.47  E-value=1.1e-14  Score=125.64  Aligned_cols=219  Identities=12%  Similarity=0.022  Sum_probs=127.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH-----HHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG-----QQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .++||||||||.||++++++|.++|++|+++.|+....     +.........+.++.+|++|.+.+.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            45699999999999999999999999999999976432     12212225678999999999988877665       5


Q ss_pred             ccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCC-CCccchhhHH
Q 022418          109 LDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGL-AQHTYSVSKS  187 (297)
Q Consensus       109 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~  187 (297)
                      .+.++++++...  .    .           .|......++.++..    ....++++.||.+...... ....|..++.
T Consensus        76 ~~~~~~~~~~~~--~----~-----------~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          76 VDVVISALAGGV--L----S-----------HHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             CSEEEECCCCSS--S----S-----------TTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cchhhhhhhhcc--c----c-----------cchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhhh
Confidence            688888887542  1    1           122233344444433    2345677777654432211 1122333443


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q 022418          188 AIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDD  267 (297)
Q Consensus       188 a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~  267 (297)
                      ........+..+   .++.+..++|+.+.++................. .....+.......+++++|+|++++.++..+
T Consensus       135 ~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~  210 (312)
T d1qyda_         135 IDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRD-KVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  210 (312)
T ss_dssp             HHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSS-EECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhccc-ccccccccccccceeeHHHHHHHHHHHhcCc
Confidence            333333333333   678889999999876533221110000000000 0000111112245789999999999998664


Q ss_pred             CCcccccEEEecCCcccc
Q 022418          268 AKYVSGHNLVVDGGFTSF  285 (297)
Q Consensus       268 ~~~~tG~~i~vdgG~~~~  285 (297)
                       ...++..+.+.++...+
T Consensus       211 -~~~~~~~~~~~~~~~~s  227 (312)
T d1qyda_         211 -QTLNKTMYIRPPMNILS  227 (312)
T ss_dssp             -GGSSSEEECCCGGGEEE
T ss_pred             -cccCceEEEeCCCcCCC
Confidence             32334445666665544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.44  E-value=1.9e-13  Score=112.10  Aligned_cols=190  Identities=16%  Similarity=0.140  Sum_probs=121.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|++|||||||.||++++++|.++|+  +|+...|+....       ..+   +..+..|..++.   +   ...+.+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~---~~~~~~d~~~~~---~---~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPR---LDNPVGPLAELL---P---QLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTT---EECCBSCHHHHG---G---GCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------ccc---ccccccchhhhh---h---ccccchhe
Confidence            58999999999999999999999998  566666654210       112   233444443332   1   12346899


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhHHHHHH
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSKSAIIG  191 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  191 (297)
                      +|+++|...  .      .........++|+.++..+++++..    .+-.+++++||..+...  ....|..+|...|.
T Consensus        66 vi~~~g~~~--~------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E~  131 (212)
T d2a35a1          66 AFCCLGTTI--K------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELEQ  131 (212)
T ss_dssp             EEECCCCCH--H------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHHH
T ss_pred             eeeeeeeec--c------ccccccccccchhhhhhhccccccc----ccccccccccccccccc--cccchhHHHHHHhh
Confidence            999998651  1      0112356788999999999988754    44567999998765433  34579999988776


Q ss_pred             HHHHHHHHHccCCc-EEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q 022418          192 LVKSMAAELCEYGI-RINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDA  268 (297)
Q Consensus       192 ~~~~la~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~~~  268 (297)
                      ..+       ..+. +...++|+.+.++...................    +    ..+.++.+|+|+++..++..+.
T Consensus       132 ~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~----~----~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         132 ALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP----G----KYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC--------C----HHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccC----C----CCcEEEHHHHHHHHHHHHcCCC
Confidence            443       2344 68889999998875432111111100000000    0    0123679999999999987653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.43  E-value=2.2e-14  Score=122.88  Aligned_cols=216  Identities=13%  Similarity=0.090  Sum_probs=128.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH------HHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ------TAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~------~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +.|+||||||||.||++++++|.++|++|++++|+......      ........+.++.+|+.+.....+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            45789999999999999999999999999999997654221      111124568889999999988777765      


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhhH
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVSK  186 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  186 (297)
                       ..+.++++++...  .                   .+...+..++...    ...++++.||............+...+
T Consensus        76 -~~~~vi~~~~~~~--~-------------------~~~~~~~~a~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          76 -NVDVVISTVGSLQ--I-------------------ESQVNIIKAIKEV----GTVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             -TCSEEEECCCGGG--S-------------------GGGHHHHHHHHHH----CCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             -hceeeeecccccc--c-------------------chhhHHHHHHHHh----ccccceeeecccccccccccccccccc
Confidence             5789999887541  1                   1112223333321    234566666654443333333444444


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q 022418          187 SAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASD  266 (297)
Q Consensus       187 ~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~~~  266 (297)
                      ............+   .++....++|+.+.++.................  ............+++++|+|+++..++..
T Consensus       130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  204 (307)
T d1qyca_         130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDK--VVILGDGNARVVFVKEEDIGTFTIKAVDD  204 (307)
T ss_dssp             HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSE--EEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred             ccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhccc--ceeeecccccccCCcHHHHHHHHHHHhcC
Confidence            4333333333333   578889999999987643321110000000000  00011111224578999999999999876


Q ss_pred             CCCcccccEEEecCCccccc
Q 022418          267 DAKYVSGHNLVVDGGFTSFK  286 (297)
Q Consensus       267 ~~~~~tG~~i~vdgG~~~~~  286 (297)
                      . ...++...++.+|..+..
T Consensus       205 ~-~~~~~~~~~~~~~~~~s~  223 (307)
T d1qyca_         205 P-RTLNKTLYLRLPANTLSL  223 (307)
T ss_dssp             G-GGTTEEEECCCGGGEEEH
T ss_pred             h-hhcCceeEEeCCCCccCH
Confidence            5 223444455566666543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=3.8e-13  Score=115.47  Aligned_cols=225  Identities=12%  Similarity=0.091  Sum_probs=136.1

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchh--HHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH--HcCCccE
Q 022418           37 ALITGAASGIGKATAAKFISNGA-KVVIADIQHQL--GQQTAKELGPNATFIACDVTKESDVSDAVDFTIS--KHNQLDI  111 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~--~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~--~~g~id~  111 (297)
                      ||||||+|.||++++++|+++|+ .|+++++-...  .... .+  .    ..+|..+.+.   ..+....  .+..++.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~-~~--~----~~~~~~~~~~---~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VD--L----NIADYMDKED---FLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-HT--S----CCSEEEEHHH---HHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc-cc--c----chhhhccchH---HHHHHhhhhcccchhh
Confidence            89999999999999999999996 58887643332  2221 11  1    1123333333   2333322  3357889


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCc
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQH  180 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~  180 (297)
                      ++|.|+...  .   ...   ......+.|+.++..++.++...-     -++++.||.....+           ..+..
T Consensus        72 i~~~aa~~~--~---~~~---~~~~~~~~~~~~~~~~l~~~~~~~-----i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~  138 (307)
T d1eq2a_          72 IFHEGACSS--T---TEW---DGKYMMDNNYQYSKELLHYCLERE-----IPFLYASSAATYGGRTSDFIESREYEKPLN  138 (307)
T ss_dssp             EEECCSCCC--T---TCC---CHHHHHHHTHHHHHHHHHHHHHHT-----CCEEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred             hhhhccccc--c---ccc---cccccccccccccccccccccccc-----cccccccccccccccccccccccccccccc
Confidence            999887542  1   111   235567888888888888776532     23666666554432           23456


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCCccCcchhhH------HHHhhcCCCHHHHHHHHHhcCCCCCCCCCHH
Q 022418          181 TYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFVMEE------MSQIYAGVDASRLLELVYSTGVLEGTHCEPN  254 (297)
Q Consensus       181 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (297)
                      .|+.+|.+.|.+++.+..+   .++.+..++|..+++|.....      ..................+.....+.+++++
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~  215 (307)
T d1eq2a_         139 VYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  215 (307)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHH
T ss_pred             ccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecc
Confidence            8999999999999888666   678999999999988744311      1000000000011111122222336788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccccCCCCC
Q 022418          255 DIANAALYLASDDAKYVSGHNLVVDGGFTSFKNLKLP  291 (297)
Q Consensus       255 dia~~~~~l~~~~~~~~tG~~i~vdgG~~~~~~~~~~  291 (297)
                      |++.++..++...    ....+++.+|......+.+.
T Consensus       216 d~~~~~~~~~~~~----~~~~~~~~~~~~~si~~i~~  248 (307)
T d1eq2a_         216 DVADVNLWFLENG----VSGIFNLGTGRAESFQAVAD  248 (307)
T ss_dssp             HHHHHHHHHHHHC----CCEEEEESCSCCBCHHHHHH
T ss_pred             cHHHHHHHHhhhc----cccccccccccchhHHHHHH
Confidence            9999999988754    24578888887666444433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.32  E-value=2.8e-12  Score=109.50  Aligned_cols=130  Identities=15%  Similarity=0.151  Sum_probs=95.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |+||||||||.||+++++.|.++|+ ++.++++...              +.+|++|.+.++++++..     ++|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~--------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE--------------FCGDFSNPKGVAETVRKL-----RPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS--------------SCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc--------------ccCcCCCHHHHHHHHHHc-----CCCEEEE
Confidence            5799999999999999999999986 4445554321              346999999999988876     7999999


Q ss_pred             CccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc-----------CCCCccch
Q 022418          115 NAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG-----------GLAQHTYS  183 (297)
Q Consensus       115 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  183 (297)
                      +||...  .    +.+.+.....+++|+.++..++.++..     ...+++++||.....+           ..+...|+
T Consensus        61 ~Aa~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~  129 (298)
T d1n2sa_          61 AAAHTA--V----DKAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (298)
T ss_dssp             CCCCCC--H----HHHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             eccccc--c----cccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCchHh
Confidence            999762  1    122334467889999999998888732     3456777777654322           22446899


Q ss_pred             hhHHHHHHHHHH
Q 022418          184 VSKSAIIGLVKS  195 (297)
Q Consensus       184 ~sK~a~~~~~~~  195 (297)
                      .+|.+.+.+.+.
T Consensus       130 ~~k~~~e~~~~~  141 (298)
T d1n2sa_         130 KTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhhhhhhhHHh
Confidence            999888776543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.24  E-value=1.6e-11  Score=107.92  Aligned_cols=213  Identities=11%  Similarity=0.025  Sum_probs=124.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.|+|+||||||.||.+++++|.++|++|+++.|+.++.....-.....+..+++|++|..++.+   .+   +...|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~---~a---~~~~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMD---TL---FEGAHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHH---HH---HTTCSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHH---HH---hcCCceE
Confidence            57999999999999999999999999999999998876543322223568899999999765322   11   2367887


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc--CCCCccchhhHHHHH
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG--GLAQHTYSVSKSAII  190 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~--~~~~~~Y~~sK~a~~  190 (297)
                      +++.....        ..          ++....+++.++..    .+..++++.||......  ......|..+|...+
T Consensus        76 ~~~~~~~~--------~~----------~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~  133 (350)
T d1xgka_          76 FINTTSQA--------GD----------EIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVE  133 (350)
T ss_dssp             EECCCSTT--------SC----------HHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHH
T ss_pred             Eeeccccc--------ch----------hhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhhhHHHHH
Confidence            77654321        11          12223334445433    23346777777665433  233346777777665


Q ss_pred             HHHHHHHHHHccCCcEEEEEeCCCccCcchhhHHHHhhc-CCCHHHHHHHHHh-cCCCCCCCCC-HHHHHHHHHHHhcCC
Q 022418          191 GLVKSMAAELCEYGIRINCISPFAIPTPFVMEEMSQIYA-GVDASRLLELVYS-TGVLEGTHCE-PNDIANAALYLASDD  267 (297)
Q Consensus       191 ~~~~~la~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~-~~dia~~~~~l~~~~  267 (297)
                      .+.+.       .++....++|+.+.............. ...... ...... .......+++ .+|+++++..++.+.
T Consensus       134 ~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         134 NYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGT-FEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSC-EEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHh-------hccCceeeeeceeecccccccccccccccccccc-ceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            54332       457788888887655422111000000 000000 000000 0000011244 479999999888655


Q ss_pred             CCcccccEEEecCC
Q 022418          268 AKYVSGHNLVVDGG  281 (297)
Q Consensus       268 ~~~~tG~~i~vdgG  281 (297)
                      .....|+.+.+.|.
T Consensus       206 ~~~~~G~~~~~~g~  219 (350)
T d1xgka_         206 PQKWNGHRIALTFE  219 (350)
T ss_dssp             HHHHTTCEEEECSE
T ss_pred             hhhcCCeEEEEeCC
Confidence            45567899988764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.89  E-value=8.5e-14  Score=112.27  Aligned_cols=44  Identities=18%  Similarity=0.345  Sum_probs=39.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      |++.|+||+|++|+++|+.|+++|++|++.+|+++++++..+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46888999999999999999999999999999999888887665

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.04  E-value=1.2e-05  Score=62.21  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +.|.++|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+.... ......+..+.......+.       ..|.+
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~-~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQH-STPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTT-EEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccc-cccccccccchhhhHhhhh-------cccee
Confidence            3689999987 9999999999999999999999999999998876543 4444566666666655554       45677


Q ss_pred             EECc
Q 022418          113 YNNA  116 (297)
Q Consensus       113 i~~a  116 (297)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            6544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.03  E-value=9e-06  Score=63.46  Aligned_cols=107  Identities=14%  Similarity=0.157  Sum_probs=71.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..+|.+|||+||+||+|...++.....|++|+.+++++++.+... +++.+...   |-++.  ..+..+.+  ..+++|
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi---~~~~~--~~~~~~~~--~~~gvD  100 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVL---AREDV--MAERIRPL--DKQRWA  100 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEE---ECC-----------C--CSCCEE
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceee---ecchh--HHHHHHHh--hccCcC
Confidence            345889999999999999999988889999999999988866554 45554332   33221  12222222  224899


Q ss_pred             EEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccccc
Q 022418          111 IMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLG  175 (297)
Q Consensus       111 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~  175 (297)
                      +++.+.|..                            .+...+..++  ..|+++.++...+...
T Consensus       101 ~vid~vgg~----------------------------~~~~~l~~l~--~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2         101 AAVDPVGGR----------------------------TLATVLSRMR--YGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             EEEECSTTT----------------------------THHHHHHTEE--EEEEEEECSCCSSSCC
T ss_pred             EEEEcCCch----------------------------hHHHHHHHhC--CCceEEEeecccCccc
Confidence            999999843                            1234455553  3689999988766554

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.4e-06  Score=63.40  Aligned_cols=79  Identities=14%  Similarity=0.187  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +|.+|+|+||+|++|...+......|++|+++++++++.+.. ++++...   ..|.++++-.+++.+...  ..++|++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~---vi~~~~~~~~~~i~~~t~--~~g~d~v  101 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAHE---VFNHREVNYIDKIKKYVG--EKGIDII  101 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSE---EEETTSTTHHHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccCccc---ccccccccHHHHhhhhhc--cCCceEE
Confidence            578999999999999999999888999999999988766544 4565432   236666544444433331  1369999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       102 ~d~~g  106 (174)
T d1yb5a2         102 IEMLA  106 (174)
T ss_dssp             EESCH
T ss_pred             eeccc
Confidence            98876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.01  E-value=7.4e-06  Score=64.22  Aligned_cols=79  Identities=20%  Similarity=0.287  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +|.+|+|+||+|++|...+......|++|+.+++++++.+..+ +.+....+   |..+++..+++.+..  ..+++|++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi---~~~~~~~~~~~~~~~--~~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAF---NYKTVNSLEEALKKA--SPDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEE---ETTSCSCHHHHHHHH--CTTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhc---ccccccHHHHHHHHh--hcCCCcee
Confidence            5899999999999999999999999999999999988765544 44443332   444444444444433  22379999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       103 ~D~vG  107 (182)
T d1v3va2         103 FDNVG  107 (182)
T ss_dssp             EESSC
T ss_pred             EEecC
Confidence            99887

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.96  E-value=4.2e-05  Score=58.48  Aligned_cols=74  Identities=23%  Similarity=0.432  Sum_probs=59.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++++++++|.|+ |++|+.+++.|...|+ ++.++.|+.++.+++.++++..+    .+   .+++.+.+.       ..
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~----~~---~~~~~~~l~-------~~   85 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VR---FDELVDHLA-------RS   85 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CC---GGGHHHHHH-------TC
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc----cc---chhHHHHhc-------cC
Confidence            689999999998 9999999999999998 59999999999999888875432    12   234444443       67


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|++.+..
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999998854

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=4.2e-05  Score=59.83  Aligned_cols=82  Identities=16%  Similarity=0.290  Sum_probs=63.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH---HHh--CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTA---KEL--GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~---~~~--~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .++++|+|+|.|+ ||.|++++..|.+.|. ++.++.|+.+..++..   +.+  .........|+.+.+++.+.+.   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            4789999999999 7999999999999998 5888999877655433   333  1234455789999887766654   


Q ss_pred             HHcCCccEEEECccCC
Q 022418          104 SKHNQLDIMYNNAGVA  119 (297)
Q Consensus       104 ~~~g~id~li~~ag~~  119 (297)
                          ..|++||+....
T Consensus        90 ----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ----SADILTNGTKVG  101 (182)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----ccceeccccCCc
Confidence                679999998654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.89  E-value=2.4e-05  Score=57.84  Aligned_cols=72  Identities=24%  Similarity=0.372  Sum_probs=58.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |.++|.|+ |.+|+.+++.|.++|+.|++++++++..+...++.  .+..+..|.++++.++++      .....|.++.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~------~i~~a~~vv~   71 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMYIA   71 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhc------Chhhhhhhcc
Confidence            57899998 99999999999999999999999999988877664  466788999998766544      1236788775


Q ss_pred             C
Q 022418          115 N  115 (297)
Q Consensus       115 ~  115 (297)
                      .
T Consensus        72 ~   72 (132)
T d1lssa_          72 V   72 (132)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=2.1e-05  Score=61.15  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|++|+|+||+|++|...+......|++|+++++++++.+..+ +++...   ..|.++++-.+++.+..  ....+|++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~---vi~~~~~d~~~~v~~~t--~g~g~d~v  101 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQ---VINYREEDLVERLKEIT--GGKKVRVV  101 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHHHT--TTCCEEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeE---EEECCCCCHHHHHHHHh--CCCCeEEE
Confidence            4789999999999999999998889999999999999876654 455432   24776654444443322  12368999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus       102 ~d~~g  106 (179)
T d1qora2         102 YDSVG  106 (179)
T ss_dssp             EECSC
T ss_pred             EeCcc
Confidence            98887

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.84  E-value=2.1e-05  Score=61.37  Aligned_cols=79  Identities=18%  Similarity=0.216  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      +|.+|||+||+|++|...+......|++|+++++++++.+. .++.+....   .|..+++-.+++.+..  ...++|++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l~~~Ga~~v---i~~~~~~~~~~v~~~t--~~~g~d~v   98 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LSRLGVEYV---GDSRSVDFADEILELT--DGYGVDVV   98 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHTTCCSEE---EETTCSTHHHHHHHHT--TTCCEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-ccccccccc---ccCCccCHHHHHHHHh--CCCCEEEE
Confidence            47899999999999999999988899999999998877654 455554422   3555543333333222  11369999


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      +.+.|
T Consensus        99 ~d~~g  103 (183)
T d1pqwa_          99 LNSLA  103 (183)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.79  E-value=6.2e-05  Score=59.14  Aligned_cols=83  Identities=16%  Similarity=0.126  Sum_probs=52.3

Q ss_pred             CC-EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHhCCCeeEEEecCCCHHHHHHHHHHHHH-HcCC
Q 022418           34 EK-VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQT---AKELGPNATFIACDVTKESDVSDAVDFTIS-KHNQ  108 (297)
Q Consensus        34 ~k-~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~---~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~-~~g~  108 (297)
                      |. +++++||+|++|.+.+.-....|++|+++.|+.+..++.   .++++....+ ..|-.+..+..+.+.++.. ..++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi-~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI-TEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE-EHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEE-eccccchhHHHHHHHHHHhhccCC
Confidence            44 455579999999999888888999999998887665543   3455544332 2211111223333333333 4457


Q ss_pred             ccEEEECcc
Q 022418          109 LDIMYNNAG  117 (297)
Q Consensus       109 id~li~~ag  117 (297)
                      +|+++.+.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999998876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.77  E-value=5.6e-05  Score=58.16  Aligned_cols=82  Identities=18%  Similarity=0.184  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC-CccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN-QLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g-~id~  111 (297)
                      .|.+++|+| +|++|...+..+...|++|+++++++++++..++ ++....+ ..|-. .++..+..+.+.+..| .+|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~-~~~~~-~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTL-VVDPA-KEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEE-ECCTT-TSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEE-ecccc-ccccchhhhhhhcccccCCce
Confidence            567899997 6899999999988899999999999998765544 4443322 22322 2233444555554443 7999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999984

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=5.6e-05  Score=58.94  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKH--NQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~--g~i  109 (297)
                      .|.+|+|+|+ |++|...+......|+ +|+++++++++++.. ++++.... +  |.++. +..+..+++.+..  ..+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v-i--~~~~~-~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADLT-L--NRRET-SVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSEE-E--ETTTS-CHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccceEE-E--ecccc-chHHHHHHHHHhhCCCCc
Confidence            5899999997 8999999999989998 799999999887654 55654332 2  33322 2222233333322  259


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|.++|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999985

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=3.2e-05  Score=51.37  Aligned_cols=44  Identities=20%  Similarity=0.280  Sum_probs=38.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA   75 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   75 (297)
                      -++++++|+||+||+|...+..+...|++|+.+.+++++.+-..
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            36789999999999999999988889999999999988765543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=5.1e-05  Score=58.64  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      .+++||.++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+.........+..+.            .....
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~   80 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL------------EGHEF   80 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG------------TTCCC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc------------ccccc
Confidence            4789999999998 8999999999999999999999999999988877643222222233211            11368


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++||+....
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999998654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.52  E-value=0.00014  Score=56.16  Aligned_cols=75  Identities=17%  Similarity=0.179  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|++|+|+||+|++|...+......|++|+.+++++++.+..+ +++....+   |..+  ..    ++.. ...++|+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i---~~~~--~~----~~~~-~~~g~D~   94 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAA---TYAE--VP----ERAK-AWGGLDL   94 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEE---EGGG--HH----HHHH-HTTSEEE
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceee---ehhh--hh----hhhh-ccccccc
Confidence            47889999999999999999988889999999999887766554 45544322   4332  12    2222 2347999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            998766

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.50  E-value=0.00017  Score=55.66  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=58.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC--CeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP--NATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      .++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.++..+.++.  .+.....|-.              ...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~--------------~~~   78 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI--------------PLQ   78 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CCS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc--------------ccc
Confidence            4789999999988 8889999999999888999999999999988887743  2333333311              124


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ..|++||+....
T Consensus        79 ~~diiIN~tp~g   90 (171)
T d1p77a1          79 TYDLVINATSAG   90 (171)
T ss_dssp             CCSEEEECCCC-
T ss_pred             ccceeeeccccc
Confidence            689999998765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=0.00011  Score=57.47  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEE-EEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi-~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .+++|||+||+||+|...++.....|++++ .+++++++......+++....   .|..+++ ..+.++++..  .++|+
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v---i~~~~~~-~~~~~~~~~~--~GvDv  103 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA---VNYKTGN-VAEQLREACP--GGVDV  103 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE---EETTSSC-HHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE---eeccchh-HHHHHHHHhc--cCceE
Confidence            347999999999999998888777998754 457777777777777765432   3555433 3444444432  36999


Q ss_pred             EEECcc
Q 022418          112 MYNNAG  117 (297)
Q Consensus       112 li~~ag  117 (297)
                      ++.+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            998887

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.0006  Score=52.21  Aligned_cols=81  Identities=20%  Similarity=0.290  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. ++++... .+..+-.+..+..+.++...  ..++|+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~~-~~~~~~~~~~~~~~~~~~~~--g~g~Dv  100 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADL-VLQISKESPQEIARKVEGQL--GCKPEV  100 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSE-EEECSSCCHHHHHHHHHHHH--TSCCSE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCcc-cccccccccccccccccccC--CCCceE
Confidence            4678999987 9999999999999999 699999999887754 4555443 23333344444444444332  237899


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.++|.
T Consensus       101 vid~~G~  107 (171)
T d1pl8a2         101 TIECTGA  107 (171)
T ss_dssp             EEECSCC
T ss_pred             EEeccCC
Confidence            9999984

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=0.00016  Score=53.17  Aligned_cols=73  Identities=15%  Similarity=0.199  Sum_probs=55.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..+...+.   ....+..|.++++.++++-      ....|.+|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~---~~~~~~gd~~~~~~l~~a~------i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY---ATHAVIANATEENELLSLG------IRNFEYVIV   70 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT---CSEEEECCTTCTTHHHHHT------GGGCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh---CCcceeeecccchhhhccC------CccccEEEE
Confidence            55777777 8999999999999999999999999887776442   2456778999987766541      125688775


Q ss_pred             Ccc
Q 022418          115 NAG  117 (297)
Q Consensus       115 ~ag  117 (297)
                      ..+
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            553

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00072  Score=51.60  Aligned_cols=76  Identities=18%  Similarity=0.266  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      -.|.+|+|.|+ |++|...+......|+++++++++.++.+ ..++++....   .|..+.+....       ...++|+
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGad~~---i~~~~~~~~~~-------~~~~~D~   96 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADEV---VNSRNADEMAA-------HLKSFDF   96 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEE---EETTCHHHHHT-------TTTCEEE
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCCcEE---EECchhhHHHH-------hcCCCce
Confidence            45789999986 99999999888889999999999888764 4566665432   36655543321       2247999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.+.|..
T Consensus        97 vid~~g~~  104 (168)
T d1uufa2          97 ILNTVAAP  104 (168)
T ss_dssp             EEECCSSC
T ss_pred             eeeeeecc
Confidence            99999853

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00096  Score=53.51  Aligned_cols=79  Identities=27%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             cCCCCCEEEEEcC----------------CCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH
Q 022418           30 RKLEEKVALITGA----------------ASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES   93 (297)
Q Consensus        30 ~~~~~k~vlVtGa----------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~   93 (297)
                      -|++||.||||+|                ||-+|.++|+++..+|++|+++......      .....+..  ..+.+.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------~~p~~~~~--~~~~t~~   73 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------PTPPFVKR--VDVMTAL   73 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------CCCTTEEE--EECCSHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------Cccccccc--ceehhhH
Confidence            3789999999987                5789999999999999999988765431      11122333  3444555


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccCC
Q 022418           94 DVSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        94 ~i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      +..+.+.   +.....|++|++|.+.
T Consensus        74 ~m~~~~~---~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          74 EMEAAVN---ASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHHH---HHGGGCSEEEECCBCC
T ss_pred             HHHHHHH---hhhccceeEeeeechh
Confidence            5444443   3445679999999987

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.20  E-value=0.00064  Score=51.95  Aligned_cols=81  Identities=12%  Similarity=0.211  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      -.|.+++|+|++|++|...+..+...|. +|+++++++++.+... +++... .  .|.++++-.++..+...  .+.+|
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~-~--i~~~~~~~~~~~~~~~~--~~~~d   99 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADY-V--INASMQDPLAEIRRITE--SKGVD   99 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSE-E--EETTTSCHHHHHHHHTT--TSCEE
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCce-e--eccCCcCHHHHHHHHhh--cccch
Confidence            3568999999999999999999888885 7888999887766554 455432 2  24455444444443321  13699


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.++|.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.18  E-value=0.00038  Score=53.68  Aligned_cols=80  Identities=13%  Similarity=0.132  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|.|+ |++|...+......|+ +|+++++++++++.. ++++... +  +|..+++-.+++.+.. + ...+|+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~~-~--i~~~~~~~~~~v~~~t-~-g~G~D~   99 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGATD-I--LNYKNGHIEDQVMKLT-N-GKGVDR   99 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCSE-E--ECGGGSCHHHHHHHHT-T-TSCEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCccc-c--ccccchhHHHHHHHHh-h-ccCcce
Confidence            4778999986 8999999988888998 699999998876655 4455432 2  2444433333322222 1 125999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.++|..
T Consensus       100 vid~~g~~  107 (174)
T d1jqba2         100 VIMAGGGS  107 (174)
T ss_dssp             EEECSSCT
T ss_pred             EEEccCCH
Confidence            99999853

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.15  E-value=0.0012  Score=50.90  Aligned_cols=81  Identities=14%  Similarity=0.257  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH-HHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESD-VSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~~~~~~g~i  109 (297)
                      -.|.+|+|+|+ ||+|...+..+...|+ +|+++++++++++.. ++++....+   |.++.+. .+...+..  ..+++
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~GA~~~i---n~~~~~~~~~~~~~~~--~g~G~  100 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAVGATECI---SPKDSTKPISEVLSEM--TGNNV  100 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHHTCSEEE---CGGGCSSCHHHHHHHH--HTSCC
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH-HhcCCcEEE---CccccchHHHHHHHHh--ccccc
Confidence            45789999986 9999999999999995 799999999988754 445544333   2222222 22223222  22379


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.+.|..
T Consensus       101 d~vi~~~g~~  110 (176)
T d1d1ta2         101 GYTFEVIGHL  110 (176)
T ss_dssp             CEEEECSCCH
T ss_pred             eEEEEeCCch
Confidence            9999998843

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.14  E-value=0.00024  Score=54.55  Aligned_cols=104  Identities=16%  Similarity=0.199  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ..+.+|||+||+||+|...++.....|++|+.+.+++++.+...+ ++.....   |.  .+...+..+..  .-+++|+
T Consensus        22 ~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~vi---~~--~~~~~~~~~~~--~~~gvd~   93 (167)
T d1tt7a2          22 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVI---SR--EDVYDGTLKAL--SKQQWQG   93 (167)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEE---EH--HHHCSSCCCSS--CCCCEEE
T ss_pred             CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccceE---ec--cchhchhhhcc--cCCCceE
Confidence            356789999999999999998877889999999999888766544 4544322   21  11111111111  1137999


Q ss_pred             EEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEeccccc
Q 022418          112 MYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGL  173 (297)
Q Consensus       112 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~  173 (297)
                      ++.+.|..                            .+...+..++  ..|+++.+....+.
T Consensus        94 vid~vgg~----------------------------~~~~~~~~l~--~~G~iv~~G~~~g~  125 (167)
T d1tt7a2          94 AVDPVGGK----------------------------QLASLLSKIQ--YGGSVAVSGLTGGG  125 (167)
T ss_dssp             EEESCCTH----------------------------HHHHHHTTEE--EEEEEEECCCSSCS
T ss_pred             EEecCcHH----------------------------HHHHHHHHhc--cCceEEEeeccCCC
Confidence            99888732                            2334455553  46899988776653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.13  E-value=0.00083  Score=51.61  Aligned_cols=81  Identities=16%  Similarity=0.270  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+.. ++++....+...|  ..+.+.+..+...  .+.+|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~Ga~~~i~~~~--~~~~~~~~~~~~~--~~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQD--YKKPIQEVLTEMS--NGGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEECGGG--CSSCHHHHHHHHT--TSCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhCCeeEEecCC--chhHHHHHHHHHh--cCCCCE
Confidence            6689999999 7899999999999985 788899999887655 4444332221112  2233444444442  247999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.+.|..
T Consensus       102 vid~~G~~  109 (176)
T d2jhfa2         102 SFEVIGRL  109 (176)
T ss_dssp             EEECSCCH
T ss_pred             EEecCCch
Confidence            99999853

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.12  E-value=0.0022  Score=45.39  Aligned_cols=84  Identities=15%  Similarity=0.159  Sum_probs=55.5

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHhC-------------CCeeEEEecCCCHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL-GQQTAKELG-------------PNATFIACDVTKESD   94 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~-------------~~v~~~~~D~s~~~~   94 (297)
                      ..+++||+++|.|+ |.+|.+-++.|.+.|++|++++..... .....+...             .....+.+.-++.+-
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~   85 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDTV   85 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHHH
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHHH
Confidence            35899999999999 679999999999999999998776543 223322210             123344445555554


Q ss_pred             HHHHHHHHHHHcCCccEEEECcc
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag  117 (297)
                      -.++.+..++.    .++||.+-
T Consensus        86 n~~i~~~a~~~----~ilVNv~D  104 (113)
T d1pjqa1          86 NQRVSDAAESR----RIFCNVVD  104 (113)
T ss_dssp             HHHHHHHHHHT----TCEEEETT
T ss_pred             HHHHHHHHHHc----CCEEEeCC
Confidence            45555555433    56777765

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.08  E-value=0.0061  Score=45.18  Aligned_cols=102  Identities=17%  Similarity=0.178  Sum_probs=61.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCch--hHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQ--LGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~--~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +++.|+||+|.+|..++..++.+|.  ++++++++.+  +.+....++       ...++....--.+.+.+        
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l--------   72 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII--------   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh--------
Confidence            4689999999999999999999984  7999998864  233222222       12233221111122211        


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHh
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRV  155 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  155 (297)
                         ..-|++|..||....     ...+.   .+.++.|..-.-.+.+.+.++
T Consensus        73 ---~~aDvVVitAG~~~~-----~g~sR---~dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          73 ---DESDVVIITSGVPRK-----EGMSR---MDLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             ---TTCSEEEECCSCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccceEEEEecccccC-----CCCCh---hhhhhhhHHHHHHHHHHHhcc
Confidence               267999999996521     12333   345666766555555555443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.03  E-value=0.0011  Score=50.96  Aligned_cols=78  Identities=15%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEE-EEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVV-IADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi-~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|.|+ |++|...+..+...|++++ ++++++++++.. ++++.. ++  .|..+++ ..+.++++.  .+++|+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga~-~~--i~~~~~~-~~~~i~~~t--~gg~D~   99 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGAT-HV--INSKTQD-PVAAIKEIT--DGGVNF   99 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCS-EE--EETTTSC-HHHHHHHHT--TSCEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCCe-EE--EeCCCcC-HHHHHHHHc--CCCCcE
Confidence            4778999987 8999999988888898754 556777665554 455543 22  3555533 333333332  247999


Q ss_pred             EEECccC
Q 022418          112 MYNNAGV  118 (297)
Q Consensus       112 li~~ag~  118 (297)
                      +|.+.|.
T Consensus       100 vid~~G~  106 (174)
T d1f8fa2         100 ALESTGS  106 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCc
Confidence            9999984

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00046  Score=53.41  Aligned_cols=48  Identities=25%  Similarity=0.359  Sum_probs=39.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGP   80 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   80 (297)
                      ..+.+++|+||+||+|...++.....|++|+.+++++++.+.. ++++.
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGa   77 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGA   77 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTE
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhcc
Confidence            3456899999999999999988888999999999999886654 45544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.02  E-value=0.0011  Score=50.67  Aligned_cols=46  Identities=28%  Similarity=0.403  Sum_probs=41.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      ++|.|+|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+++.+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            6789999988 9999999999999997 69999999999888877764

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.99  E-value=0.0034  Score=47.43  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=54.3

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-------------CCCeeEEEecCCCHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-------------GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------------~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      |++.|.|. |-+|.++++.|.++|++|++.+|+++..++..+.-             ..++.++   -...+++++++++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil---avp~~~~~~vl~~   76 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL---CTPIQLILPTLEK   76 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE---CSCHHHHHHHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc---cCcHhhhhhhhhh
Confidence            45777766 99999999999999999999999988777655432             1122222   2245678888888


Q ss_pred             HHHHcCCccEEEECcc
Q 022418          102 TISKHNQLDIMYNNAG  117 (297)
Q Consensus       102 ~~~~~g~id~li~~ag  117 (297)
                      +.....+=.+++..++
T Consensus        77 l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          77 LIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             hhhhcccccceeeccc
Confidence            8665444445555443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.97  E-value=0.008  Score=44.56  Aligned_cols=110  Identities=19%  Similarity=0.235  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +.+++.|.|+ |.+|..++..|+.+|  .+|+++|+++++.+....++      .........|.   ++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----------
Confidence            4568888896 999999999999988  47999999987765544333      12233333332   21          


Q ss_pred             HcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          105 KHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       105 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                       ....|++|..+|....+        .++-.+.+..|+.-.-.+.+.+.++   ...+.++++|
T Consensus        70 -~~~adivvitag~~~~~--------g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvt  121 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKP--------GESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (146)
T ss_dssp             -GTTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -hccccEEEEecccccCC--------CCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeC
Confidence             12679999999865211        1223445556655444444444332   2345555554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.95  E-value=0.0023  Score=48.45  Aligned_cols=76  Identities=18%  Similarity=0.202  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++.. ++++....   .|.++.+..+++.+    ..++.|..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga~~~---i~~~~~~~~~~~~~----~~~g~~~~   97 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGASLT---VNARQEDPVEAIQR----DIGGAHGV   97 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEE---EETTTSCHHHHHHH----HHSSEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hccCcccc---ccccchhHHHHHHH----hhcCCccc
Confidence            4779999886 9999999998888999999999999887655 44554322   25555444443333    22445555


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |.+++
T Consensus        98 i~~~~  102 (166)
T d1llua2          98 LVTAV  102 (166)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            55554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.94  E-value=0.0033  Score=46.86  Aligned_cols=83  Identities=8%  Similarity=0.053  Sum_probs=56.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++..-|++.|.||.|-+|..+++.|.++|++|.+.+|+.....+...+ .......   .....++...+.++.....+=
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~v~~---~~~~~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-NADVVIV---SVPINLTLETIERLKPYLTEN   80 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-TCSEEEE---CSCGGGHHHHHHHHGGGCCTT
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-hcccccc---ccchhhheeeeecccccccCC
Confidence            455668999999999999999999999999999999988765554332 2223322   233456667777765543322


Q ss_pred             cEEEECc
Q 022418          110 DIMYNNA  116 (297)
Q Consensus       110 d~li~~a  116 (297)
                      .+++..+
T Consensus        81 ~iiiD~~   87 (152)
T d2pv7a2          81 MLLADLT   87 (152)
T ss_dssp             SEEEECC
T ss_pred             ceEEEec
Confidence            3444444

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0014  Score=50.08  Aligned_cols=79  Identities=19%  Similarity=0.266  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~id  110 (297)
                      .|.+|+|.|+ +|+|...+..+...|+. |+++++++++. +..++++....+   |..+ .+.+.+.++...  .+++|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~~i---~~~~~~~~~~~~~~~~~--~~g~D  100 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATECI---NPQDFSKPIQEVLIEMT--DGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEEE---CGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcEEE---eCCchhhHHHHHHHHHc--CCCCc
Confidence            5779999998 69999999999999975 66666666665 455667654322   2222 233444444442  24799


Q ss_pred             EEEECccC
Q 022418          111 IMYNNAGV  118 (297)
Q Consensus       111 ~li~~ag~  118 (297)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999884

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.88  E-value=0.0028  Score=48.16  Aligned_cols=76  Identities=17%  Similarity=0.205  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++.. ++++....+   |..+....   .+   ...+..|.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa~~~i---~~~~~~~~---~~---~~~~~~d~v   95 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHYI---ATLEEGDW---GE---KYFDTFDLI   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEE---EGGGTSCH---HH---HSCSCEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccCCcEEe---eccchHHH---HH---hhhcccceE
Confidence            6789999987 8999998888778999999999999887765 456544222   22221111   11   223578999


Q ss_pred             EECccCC
Q 022418          113 YNNAGVA  119 (297)
Q Consensus       113 i~~ag~~  119 (297)
                      +.+.|..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9988754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.81  E-value=0.0029  Score=48.47  Aligned_cols=81  Identities=20%  Similarity=0.257  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQLGQQTAKELGPNATFIACDVTK-ESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~~~~~~g~i  109 (297)
                      -.|.+|+|.|+ |+||...+..+...|++ |+++++++++++ ..++++....+   |..+ .+...+..+..  ..+++
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~Ga~~~i---~~~~~~~~~~~~~~~~--~~~G~   99 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKALGATDCL---NPRELDKPVQDVITEL--TAGGV   99 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEEE---CGGGCSSCHHHHHHHH--HTSCB
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHhCCCccc---CCccchhhhhhhHhhh--hcCCC
Confidence            45679999975 99999999999999984 777888887754 44556543322   2222 12334444333  23589


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |++|.++|..
T Consensus       100 d~vie~~G~~  109 (174)
T d1e3ia2         100 DYSLDCAGTA  109 (174)
T ss_dssp             SEEEESSCCH
T ss_pred             cEEEEecccc
Confidence            9999999843

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.77  E-value=0.0075  Score=44.61  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=68.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           36 VALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      ++.|+||+|.+|.+++..++.+|.  +++++|.+..+.+..  ++ +..............+..+.++       .-|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~~~~~~~~~~~~~~~~~~~~~~-------~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSHIETRATVKGYLGPEQLPDCLK-------GCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTTSSSSCEEEEEESGGGHHHHHT-------TCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhhhhhhcCCCeEEcCCChHHHhC-------CCCEE
Confidence            588999999999999999999886  589999877544332  33 2111111111112333333333       67999


Q ss_pred             EECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          113 YNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       113 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      |..+|....+     ..+.   .+.++.|+.-.-.+.+.+.++   ...+.++++|.
T Consensus        73 Vitag~~~~~-----g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtN  118 (144)
T d1mlda1          73 VIPAGVPRKP-----GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISN  118 (144)
T ss_dssp             EECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             EECCCcCCCC-----CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEecC
Confidence            9999965211     1222   345667776655556655554   23466666654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.00079  Score=46.09  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.|.+.....  .+.+.........+. +.    ..+.       .+|
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~-~~----~~~~-------~~d   66 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVERHTGSL-ND----EWLM-------AAD   66 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSCEEESBC-CH----HHHH-------HCS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccceeeccc-ch----hhhc-------cCC
Confidence            789999999999 77899999999999999999998664211  112222333333332 11    1122       469


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      .+|...|+.
T Consensus        67 ~vi~SPGi~   75 (93)
T d2jfga1          67 LIVASPGIA   75 (93)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCCC
Confidence            999999975

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.74  E-value=0.01  Score=44.33  Aligned_cols=120  Identities=13%  Similarity=0.129  Sum_probs=69.0

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      --+.+++.|.|+ |.+|..++..++..+. +++++|.+++.++....++       +...... .+ ++.+   +.++  
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~~---~~~~--   75 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSYE---AALT--   75 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSHH---HHHT--
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cchh---hhhc--
Confidence            345678888897 9999999999888885 7999999988766554443       1122121 11 1221   1122  


Q ss_pred             HHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          103 ISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                           .-|++|..+|....+..+-.+.+.   .+.+..|+.-.-.+.+.+.++   ...+-++++|.
T Consensus        76 -----~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~---~p~aiviivsN  131 (154)
T d1pzga1          76 -----GADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTN  131 (154)
T ss_dssp             -----TCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             -----CCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeCC
Confidence                 679999999976422222222232   233455555444445544432   23455655553

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.64  E-value=0.011  Score=44.18  Aligned_cols=114  Identities=13%  Similarity=0.098  Sum_probs=62.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC---------eEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA---------KVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~---------~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ..+|.|+||+|.+|..++..|+..+.         +++..+++.+.++....++    ......+...-.+.+    .+ 
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-   78 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV----AF-   78 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH----HT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh----hc-
Confidence            45899999999999999999998653         2222344444444443333    122333333322221    12 


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                            ...|++|..+|....     ...+.+   +.+..|+.-.-.+.+.+..+-  ...+.++.+|
T Consensus        79 ------~~advViitaG~~~~-----pg~~r~---dl~~~N~~i~~~~~~~i~k~a--~~~~~vivvs  130 (154)
T d1y7ta1          79 ------KDADYALLVGAAPRK-----AGMERR---DLLQVNGKIFTEQGRALAEVA--KKDVKVLVVG  130 (154)
T ss_dssp             ------TTCSEEEECCCCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             ------ccccEEEeecCcCCC-----CCCcHH---HHHHHHHHHHHHHHHHHHHhC--CCCcEEEEec
Confidence                  378999999997531     123443   345555554444444433321  2234555554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.61  E-value=0.017  Score=43.37  Aligned_cols=117  Identities=14%  Similarity=0.150  Sum_probs=71.1

Q ss_pred             CCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHH
Q 022418           26 STESRKLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVS   96 (297)
Q Consensus        26 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~   96 (297)
                      +.....+..+++.|.|+ |.+|..++..++.+|.  +++++|++++..+....++       ........   .+.+++ 
T Consensus        12 ~~~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~-   86 (160)
T d1i0za1          12 AEEEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT-   86 (160)
T ss_dssp             SCSCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG-
T ss_pred             CcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc-
Confidence            34445677788999996 9999999999999986  6999999988765554333       12221112   223222 


Q ss_pred             HHHHHHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEec
Q 022418           97 DAVDFTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTAS  169 (297)
Q Consensus        97 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vss  169 (297)
                                ..-|++|..||....+.     .+.   .+.+..|+.    +++.+.+.+.+. ..+-++++|.
T Consensus        87 ----------~~adiVVitAg~~~~~g-----~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 ----------ANSKIVVVTAGVRQQEG-----ESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ----------TTCSEEEECCSCCCCTT-----CCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ----------ccccEEEEecCCccccC-----cch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence                      26799999999753211     222   234445555    444444444332 3456666653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.61  E-value=0.011  Score=45.10  Aligned_cols=82  Identities=11%  Similarity=0.031  Sum_probs=62.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------------------CCCeeEEEecCCCHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------------------GPNATFIACDVTKESDVS   96 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------------------~~~v~~~~~D~s~~~~i~   96 (297)
                      +.+-|.|- |-+|.++|+.|+++|++|++.+|+.++.+++.++.                  -.....+...+.+.+++.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            46777777 89999999999999999999999999888775531                  122345555677778888


Q ss_pred             HHHHHHHHHcCCccEEEECcc
Q 022418           97 DAVDFTISKHNQLDIMYNNAG  117 (297)
Q Consensus        97 ~~~~~~~~~~g~id~li~~ag  117 (297)
                      ++.+.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888776555566766654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.60  E-value=0.0038  Score=47.10  Aligned_cols=76  Identities=21%  Similarity=0.193  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~l  112 (297)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++.. ++++....   .|.++.+.... +...   .+..|.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga~~~---~~~~~~~~~~~-~~~~---~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLV---VNPLKEDAAKF-MKEK---VGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEE---ECTTTSCHHHH-HHHH---HSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCccee---cccccchhhhh-cccc---cCCCceE
Confidence            5789999875 9999999998889999999999999887755 44554422   24444332222 2222   2345666


Q ss_pred             EECcc
Q 022418          113 YNNAG  117 (297)
Q Consensus       113 i~~ag  117 (297)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            66665

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.52  E-value=0.0033  Score=48.07  Aligned_cols=43  Identities=26%  Similarity=0.226  Sum_probs=38.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      .|++.|.|+ |.+|.+++..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            378999999 9999999999999999999999999888777654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.49  E-value=0.0055  Score=46.61  Aligned_cols=79  Identities=15%  Similarity=0.299  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++...+ ++.. +++  |.+ .+..++..+...  ...+|+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga~-~~i--~~~-~~~~~~~~~~~~--~~g~d~  103 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGAD-HVV--DAR-RDPVKQVMELTR--GRGVNV  103 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCS-EEE--ETT-SCHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cccc-eee--cCc-ccHHHHHHHhhC--CCCceE
Confidence            4789999886 9999999888888886 56778888877665544 4433 222  333 234444443321  236999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.++|..
T Consensus       104 vid~~g~~  111 (172)
T d1h2ba2         104 AMDFVGSQ  111 (172)
T ss_dssp             EEESSCCH
T ss_pred             EEEecCcc
Confidence            99999843

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.48  E-value=0.013  Score=43.35  Aligned_cols=73  Identities=16%  Similarity=0.222  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFT  102 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~  102 (297)
                      -.++++.|+|+ |.+|..++..++.+|.  +++++|+++++++....++       ...+.....|   .+++       
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~l-------   72 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDDC-------   72 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGGT-------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHHh-------
Confidence            45678888997 9999999999999875  6999999988765544443       1223332323   2221       


Q ss_pred             HHHcCCccEEEECccCC
Q 022418          103 ISKHNQLDIMYNNAGVA  119 (297)
Q Consensus       103 ~~~~g~id~li~~ag~~  119 (297)
                          ..-|++|..+|..
T Consensus        73 ----~daDvvvitag~~   85 (148)
T d1ldna1          73 ----RDADLVVICAGAN   85 (148)
T ss_dssp             ----TTCSEEEECCSCC
T ss_pred             ----ccceeEEEecccc
Confidence                2579999999965

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0063  Score=45.26  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=56.5

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-CCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-GPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      .++|.|. +.+|..+++.|.++|.+|++++.+++......++. ...+.++..|.++++.++++-      ..+.|.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEE
Confidence            4677777 79999999999999999999999987665555443 456889999999986554332      236788875


Q ss_pred             Cc
Q 022418          115 NA  116 (297)
Q Consensus       115 ~a  116 (297)
                      ..
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.40  E-value=0.0022  Score=49.32  Aligned_cols=47  Identities=26%  Similarity=0.434  Sum_probs=41.0

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      .+++||.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            4689999999988 789999999998877 8999999999888877655

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.38  E-value=0.0027  Score=46.15  Aligned_cols=73  Identities=16%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEE-EeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVI-ADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~-~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++.|.|++|-+|+++++.+.+.|+.++. ++++...      .+ .+.. +..|+|.|+...+.++...+.  ++-.++
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~-~~~D-VvIDFS~p~~~~~~l~~~~~~--~~p~Vi   70 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL-DSPD-VVIDFSSPEALPKTVDLCKKY--RAGLVL   70 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC-SCCS-EEEECSCGGGHHHHHHHHHHH--TCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh-ccCC-EEEEecCHHHHHHHHHHHHhc--CCCEEE
Confidence            46899999999999999999999998664 4554321      11 1122 456999999999999988766  555776


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      -..|
T Consensus        71 GTTG   74 (128)
T d1vm6a3          71 GTTA   74 (128)
T ss_dssp             CCCS
T ss_pred             EcCC
Confidence            5555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.37  E-value=0.042  Score=40.17  Aligned_cols=109  Identities=17%  Similarity=0.224  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.|+|+ |.+|.+++..++..|  .++++.|.+++.++.....+       .........  .+.+++          
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~----------   67 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh----------
Confidence            35778896 999999999999987  47999999998766544332       223333322  223222          


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                       ...|++|..+|....+     ..+.   .+.++.|..-...+.+.+.++   ...+.++++|
T Consensus        68 -~dadvvvitag~~~~~-----g~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvt  118 (142)
T d1guza1          68 -ANSDIVIITAGLPRKP-----GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVS  118 (142)
T ss_dssp             -TTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECC
T ss_pred             -cCCeEEEEEEecCCCC-----CCch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEec
Confidence             2679999999975311     1222   344555655444455554443   2345555554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.36  E-value=0.0055  Score=47.77  Aligned_cols=80  Identities=19%  Similarity=0.214  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      .|.+|+|.|+ |++|...+......|+ +|+++++++++++.. ++++...   ..|-.+. .+.+.+.++. ....+|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga~~---~~~~~~~-~~~~~i~~~t-~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEI---ADLSLDT-PLHEQIAALL-GEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCEE---EETTSSS-CHHHHHHHHH-SSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccccE---EEeCCCc-CHHHHHHHHh-CCCCcEE
Confidence            5779999986 8999888877777787 688889988876654 4444322   2244443 3333333332 2236999


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|.+.|.-
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99999853

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.34  E-value=0.0067  Score=45.60  Aligned_cols=81  Identities=11%  Similarity=0.114  Sum_probs=55.7

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHHH---HH
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAVD---FT  102 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~~---~~  102 (297)
                      ++-|.|- |-+|.++|+.|+++|++|++.+|++++.+++.+..          -.+...+..-+.+++++++++.   .+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            4666665 99999999999999999999999998887765432          1123445556777888887762   34


Q ss_pred             HHHcCCccEEEECcc
Q 022418          103 ISKHNQLDIMYNNAG  117 (297)
Q Consensus       103 ~~~~g~id~li~~ag  117 (297)
                      .....+=+++|...-
T Consensus        81 ~~~~~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             hhccCCCCEEEECCC
Confidence            433333345555443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.21  E-value=0.0086  Score=45.80  Aligned_cols=114  Identities=14%  Similarity=0.059  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCC---C----eEEEEeCCch--hHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNG---A----KVVIADIQHQ--LGQQTAKEL---G-PNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G---~----~Vi~~~r~~~--~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      .-+|.||||+|.||.+++..|++..   .    .+.+.+....  .++...-++   . .....+..- ++.   .+.  
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~~~--   97 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---YEV--   97 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHH--
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---hhh--
Confidence            3479999999999999999999843   2    3445555443  333333332   1 122222211 221   122  


Q ss_pred             HHHHHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          101 FTISKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                           +...|++|..+|....+     ..+.   .+.+..|..-.-.+.+.+.++-  .....+++++
T Consensus        98 -----~~~aDvVvi~ag~~rkp-----g~tR---~Dll~~N~~I~k~~~~~i~~~a--~~~~~vlvv~  150 (175)
T d7mdha1          98 -----FEDVDWALLIGAKPRGP-----GMER---AALLDINGQIFADQGKALNAVA--SKNVKVLVVG  150 (175)
T ss_dssp             -----TTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             -----ccCCceEEEeeccCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHhhC--CCCcEEEEec
Confidence                 23789999999975311     2333   4556667664444444444432  2234455553

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.19  E-value=0.0081  Score=45.82  Aligned_cols=80  Identities=14%  Similarity=0.207  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH-HHHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKES-DVSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~-~i~~~~~~~~~~~g~i  109 (297)
                      -.|.+|+|.|+ |++|...+..+...|+ +|+++++++++++..+ +++....+   |.++.+ .+.+..+..  ..+.+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i---~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECL---NPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEE---CGGGCSSCHHHHHHHH--TTSCB
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEE---cCCCchhHHHHHHHHh--cCCCC
Confidence            56789999986 9999999999999997 6888999988876654 45543322   333222 233333332  22479


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |++|-++|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.18  E-value=0.037  Score=41.64  Aligned_cols=79  Identities=19%  Similarity=0.269  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      ..+.-+++|.|+ |-.|.+-+......|+.|.++|.+.+.++++.......+.+.   .++++.+++.++       ..|
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~-------~aD   97 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVA-------EAD   97 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHH-------TCS
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhc-------cCc
Confidence            467789999998 788999999999999999999999999998887765555443   456677766665       569


Q ss_pred             EEEECccCCC
Q 022418          111 IMYNNAGVAC  120 (297)
Q Consensus       111 ~li~~ag~~~  120 (297)
                      ++|..+=+.+
T Consensus        98 ivI~aalipG  107 (168)
T d1pjca1          98 LLIGAVLVPG  107 (168)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeeecCC
Confidence            9999987654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.17  E-value=0.023  Score=44.18  Aligned_cols=40  Identities=28%  Similarity=0.398  Sum_probs=36.2

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ..++.||++.|.|- |.||+.+++.+...|++|+..++..+
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            46799999999998 89999999999999999999987654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.071  Score=39.08  Aligned_cols=112  Identities=20%  Similarity=0.250  Sum_probs=63.9

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC---CCeEEEEeCCchhHHHHHHHh-CC--Ce-eEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           35 KVALITGAASGIGKATAAKFISN---GAKVVIADIQHQLGQQTAKEL-GP--NA-TFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~---G~~Vi~~~r~~~~~~~~~~~~-~~--~v-~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +++.|+|++|.+|.+++..|+.+   +..+.+.|..+ ..+...-++ +.  .. .....+-.+.+.    ++       
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~~-------   68 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----LE-------   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----HT-------
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----cC-------
Confidence            47889999999999999988643   46799999864 333333333 11  11 111222223322    22       


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      .-|++|..+|....+.     .+.   .+.++.|..-.-.+.+.+.++-   ..+.++++|.
T Consensus        69 ~aDvvvitaG~~~k~g-----~~R---~dl~~~N~~i~~~v~~~i~~~~---p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKPG-----MDR---SDLFNVNAGIVKNLVQQVAKTC---PKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCTT-----CCG---GGGHHHHHHHHHHHHHHHHHHC---TTSEEEECSS
T ss_pred             CCCEEEECCCccCCCC-----cch---hhHHHHHHHHHHHHHHHHHhhC---CCcEEEEccC
Confidence            5699999999753221     222   3445666554444555554432   3456666654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.0093  Score=46.00  Aligned_cols=43  Identities=23%  Similarity=0.198  Sum_probs=37.5

Q ss_pred             CCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           27 TESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        27 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      ....++.||++.|.|. |.||+++++.+...|.+|+..++....
T Consensus        37 ~~~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          37 FSGTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            3456799999999996 999999999999999999999987654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.005  Score=47.94  Aligned_cols=42  Identities=21%  Similarity=0.288  Sum_probs=37.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            68999999 8899999999999999999999999877655443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.09  E-value=0.0023  Score=50.26  Aligned_cols=45  Identities=20%  Similarity=0.336  Sum_probs=39.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA   75 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   75 (297)
                      .+++||+++|-| .|.+|..+++.|.+.|++|++.+.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            379999999987 588999999999999999999998887665543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.01  E-value=0.033  Score=40.99  Aligned_cols=70  Identities=16%  Similarity=0.261  Sum_probs=48.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      |++.|+|+ |.+|..++..++.+|.  +++++|.++++++....++       ........   .+.+.+          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHHh----------
Confidence            67788895 9999999999999874  6999999988765544333       12222222   233222          


Q ss_pred             cCCccEEEECccCC
Q 022418          106 HNQLDIMYNNAGVA  119 (297)
Q Consensus       106 ~g~id~li~~ag~~  119 (297)
                       ..-|++|..||..
T Consensus        68 -~~adiVVitaG~~   80 (146)
T d1hyha1          68 -ADADVVISTLGNI   80 (146)
T ss_dssp             -TTCSEEEECCSCG
T ss_pred             -ccccEEEEecccc
Confidence             2679999999965

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.97  E-value=0.016  Score=43.91  Aligned_cols=80  Identities=18%  Similarity=0.308  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHH-HHHHHHHHHHHcCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESD-VSDAVDFTISKHNQL  109 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~~~~~~g~i  109 (297)
                      -.|.+|+|.|+ +++|...+..++..|. +|+++++++++++.. ++++... ++  |.++.+. ..+..+...  .+.+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~GAd~-~i--n~~~~~~~~~~~~~~~~--~~G~   99 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD-FV--NPNDHSEPISQVLSKMT--NGGV   99 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE-EE--CGGGCSSCHHHHHHHHH--TSCB
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH-HHcCCcE-EE--cCCCcchhHHHHHHhhc--cCCc
Confidence            45678999986 7788888888888877 588888888877654 4465433 22  3332222 233333332  2479


Q ss_pred             cEEEECccC
Q 022418          110 DIMYNNAGV  118 (297)
Q Consensus       110 d~li~~ag~  118 (297)
                      |+++.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999984

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.94  E-value=0.051  Score=39.70  Aligned_cols=108  Identities=19%  Similarity=0.241  Sum_probs=61.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |++.|.|+ |.+|.++|..|+.++. +++++|.+++..+....++       ........+  .|.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            46777786 9999999999998875 7999999888766554443       112222211  122222           


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEe
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTA  168 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vs  168 (297)
                      ..-|++|..||....+        .++-.+.+..|+.    +++...+.+.+. ..+.++++|
T Consensus        68 ~~advvvitag~~~~~--------~~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKP--------GMSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             TTCSEEEECCSCC-----------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECS
T ss_pred             cCCCEEEEeeeccCCc--------CcchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeC
Confidence            2579999999965211        1122344455554    455555555543 345555544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.91  E-value=0.026  Score=43.93  Aligned_cols=41  Identities=24%  Similarity=0.311  Sum_probs=36.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ...++.||++.|.|. |.||+++++.+...|++|+..++...
T Consensus        39 ~~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          39 IGKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            346899999999998 89999999999999999999988643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.78  E-value=0.074  Score=39.22  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=65.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++.|.|+ |.+|.+++..++..+. +++++|++.+..+....++       ..+......|  +.+++           
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~-----------   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL-----------   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc-----------
Confidence            46777785 9999999998888775 5999999988766554433       2233333322  22211           


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                      ..-|++|..+|....+...-.+.+.   .+.+..|..-.-.+...+.++   ...+.++++|
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~~iv~~i~~~i~~~---~p~aivivvt  125 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVT  125 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            3679999999976322211111222   334555554444444444332   2345566555

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.037  Score=42.56  Aligned_cols=47  Identities=26%  Similarity=0.178  Sum_probs=36.4

Q ss_pred             ccCCCCCccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           22 SRGLSTESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        22 ~~~~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      +........++.++++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        32 w~~~~~~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          32 GNKLAAGSFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CC-----CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccccccccccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            333444556899999999976 99999999999999999999987643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.082  Score=39.39  Aligned_cols=74  Identities=18%  Similarity=0.221  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      .++..++.|+|+ |.+|..+|..++.+|.  .++++|++.+.++....++       +........|   .+.+      
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~~------   85 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNVS------   85 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGGG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhhh------
Confidence            345557888886 9999999999999875  6999999988766554443       1122222223   2211      


Q ss_pred             HHHHcCCccEEEECccCC
Q 022418          102 TISKHNQLDIMYNNAGVA  119 (297)
Q Consensus       102 ~~~~~g~id~li~~ag~~  119 (297)
                           ..-|++|..||..
T Consensus        86 -----~~adivvitag~~   98 (159)
T d2ldxa1          86 -----ANSKLVIITAGAR   98 (159)
T ss_dssp             -----TTEEEEEECCSCC
T ss_pred             -----ccccEEEEecccc
Confidence                 3679999999975

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.039  Score=38.60  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=56.6

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ......++.|.|| |=+|+-++....+.|+++++.+.+.+.-..   .  .--.++..|+.|.+.+.++.+..     ++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~--va~~~i~~~~~d~~~l~~~~~~~-----~~   75 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---H--VAHRSHVINMLDGDALRRVVELE-----KP   75 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---G--GSSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh---h--cCCeEEECCCCCHHHHHHHHHhh-----CC
Confidence            3455668999996 889999999999999999999987653111   1  12356788999999999888765     68


Q ss_pred             cEEE
Q 022418          110 DIMY  113 (297)
Q Consensus       110 d~li  113 (297)
                      |++-
T Consensus        76 DviT   79 (111)
T d1kjqa2          76 HYIV   79 (111)
T ss_dssp             SEEE
T ss_pred             ceEE
Confidence            9885

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.74  E-value=0.046  Score=41.37  Aligned_cols=79  Identities=13%  Similarity=0.107  Sum_probs=53.8

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC---------------------CCeeEEEecCCCHHHH
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---------------------PNATFIACDVTKESDV   95 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---------------------~~v~~~~~D~s~~~~i   95 (297)
                      +-|.| .|-+|.+++++|++.|++|.+.+|++++.+++.+...                     .....+..-+.+...+
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            44554 5899999999999999999999999999888766531                     1122333444455566


Q ss_pred             HHHHHHHHHHcCCccEEEECc
Q 022418           96 SDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~a  116 (297)
                      ...++.......+=+++|...
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence            666666655554445565544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.74  E-value=0.045  Score=40.03  Aligned_cols=108  Identities=19%  Similarity=0.196  Sum_probs=60.4

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhCC------CeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           36 VALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELGP------NATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~------~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++.|.|+ |.+|..++..++.++.  +++++|++++.++....++..      ......   .+.++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~---~~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee---CcHHH-----------hC
Confidence            4556687 9999999999999875  699999998876555544421      111111   12221           23


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      .-|++|..||....+        .+.-.+.+..|+.-.-.+.+.+.++   ...+.++++|.
T Consensus        68 ~adivvitag~~~~~--------~~~r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP--------GETRLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCceEEEecccccCc--------CcchhHHhhHHHHHHHHHHHHhhcc---CCCceEEEecC
Confidence            679999999965211        1223455666766444445444442   23455666553

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.72  E-value=0.048  Score=40.67  Aligned_cols=82  Identities=10%  Similarity=0.061  Sum_probs=55.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------CCCeeEEEecCCCHHHHHHHHHH---
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------GPNATFIACDVTKESDVSDAVDF---  101 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~v~~~~~D~s~~~~i~~~~~~---  101 (297)
                      ++|-+.| .|-+|.++|++|+++|++|.+.+|+.++.+.....-          -.....+..-+.+.+.++.++..   
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            3466665 499999999999999999999999988877655432          12344566667777777777654   


Q ss_pred             HHHHcCCccEEEECcc
Q 022418          102 TISKHNQLDIMYNNAG  117 (297)
Q Consensus       102 ~~~~~g~id~li~~ag  117 (297)
                      +.....+=+++|....
T Consensus        81 ~~~~l~~g~iiid~st   96 (162)
T d3cuma2          81 LLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHSCTTCEEEECSC
T ss_pred             ccccCCCCCEEEECCC
Confidence            3333333345665543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.66  E-value=0.04  Score=42.27  Aligned_cols=40  Identities=28%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA   75 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   75 (297)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.+++..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            56889998 88999999999999999999999988766543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.63  E-value=0.027  Score=40.95  Aligned_cols=75  Identities=13%  Similarity=0.172  Sum_probs=51.5

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHC-CCeEEE-EeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           36 VALITGAASGIGKATAAKFISN-GAKVVI-ADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~-G~~Vi~-~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      ++.|.|++|-+|+++++...+. ++.++. +++... +..... .+.+   +..|+|.|+...+.++.+.+.  ++-.|+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~-~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~~Vi   73 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTD-GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAVV   73 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHT-TTCS---EEEECCCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhcc-ccCC---EEEEcccHHHHHHHHHHHHhc--CCCEEE
Confidence            5789999999999999987764 566544 454332 222221 1222   456999999999999988765  555777


Q ss_pred             ECcc
Q 022418          114 NNAG  117 (297)
Q Consensus       114 ~~ag  117 (297)
                      -..|
T Consensus        74 GTTG   77 (135)
T d1yl7a1          74 GTTG   77 (135)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5555

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.63  E-value=0.14  Score=37.27  Aligned_cols=107  Identities=18%  Similarity=0.152  Sum_probs=63.4

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCc--hhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           36 VALITGAASGIGKATAAKFISNGA--KVVIADIQH--QLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~--~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++.|+|++|.+|.+++..++.++.  ++++.|.+.  +..+...-++      .........|   .+++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YEDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHHh----------
Confidence            578999999999999999999886  588888643  3333222122      2233332222   3221          


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCC-CceEEEEe
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRR-SGCILCTA  168 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~vs  168 (297)
                       ..-|++|..||.... +    ..+.   .+.++.|..    +++.+.+.+.+.. .+.++++|
T Consensus        69 -~~aDiVvitaG~~~~-~----g~~R---~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          69 -AGSDVVVITAGIPRQ-P----GQTR---IDLAGDNAP----IMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             -TTCSEEEECCCCCCC-T----TCCH---HHHHHHHHH----HHHHHHHHHHTTCSCCEEEECC
T ss_pred             -hhcCEEEEecccccc-c----CCch---hhHHHHHHH----HHHHHHHHHHhcCCCceEEEec
Confidence             267999999996521 1    1232   445666665    4555555554443 45555554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.0075  Score=45.16  Aligned_cols=36  Identities=14%  Similarity=-0.000  Sum_probs=32.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLG   71 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~   71 (297)
                      |++.|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            57899998 9999999999999999999999988643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.53  E-value=0.027  Score=43.65  Aligned_cols=40  Identities=20%  Similarity=0.238  Sum_probs=36.0

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ..+++||++.|.|. |.||+++++.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            46799999999987 89999999999999999999988644

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.44  E-value=0.1  Score=38.46  Aligned_cols=76  Identities=21%  Similarity=0.144  Sum_probs=44.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHh----CCCeeEEEecCCCHHHHHHHHH
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA-------KVVIADIQHQ--LGQQTAKEL----GPNATFIACDVTKESDVSDAVD  100 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~  100 (297)
                      ..+|.|+||+|.+|.+++..|+..+.       .+.+.+.+..  +++...-++    ......+..--.++    +.+ 
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~-   77 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE----IAF-   77 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----HHT-
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----ccc-
Confidence            35899999999999999999987542       3555555443  333332221    11222222211111    112 


Q ss_pred             HHHHHcCCccEEEECccCCC
Q 022418          101 FTISKHNQLDIMYNNAGVAC  120 (297)
Q Consensus       101 ~~~~~~g~id~li~~ag~~~  120 (297)
                            ...|++|..+|...
T Consensus        78 ------~~~dvVVitag~~~   91 (154)
T d5mdha1          78 ------KDLDVAILVGSMPR   91 (154)
T ss_dssp             ------TTCSEEEECCSCCC
T ss_pred             ------CCceEEEEecccCC
Confidence                  36899999999763

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.43  E-value=0.22  Score=35.95  Aligned_cols=107  Identities=21%  Similarity=0.265  Sum_probs=63.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAASGIGKATAAKFISNG--AKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G--~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      +++.|.|+ |.+|..++..++.++  .++++.|.++++++....++      .........   +.+++           
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~-----------   65 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL-----------   65 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh-----------
Confidence            35778896 899999999999887  46999999988766544333      122333222   23222           


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEe
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTA  168 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vs  168 (297)
                      ..-|++|..+|....+     ..+.   .+.+..|..    +++.+.+.+.+. ..+.++++|
T Consensus        66 ~~adivvitag~~~~~-----g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          66 KGSDVVIVAAGVPQKP-----GETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TTCSEEEECCCCCCCS-----SCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCCEEEEecccccCC-----Ccch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            2679999999965311     1232   334555554    333444444332 345555554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.42  E-value=0.16  Score=36.91  Aligned_cols=108  Identities=20%  Similarity=0.243  Sum_probs=63.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh-------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL-------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      +++.|.|+ |.+|.+++..++.+|.  +++++|.+++..+...-++       .........  .|.+++          
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~----------   67 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh----------
Confidence            46778896 9999999999998875  5999999988765433222       222222221  122222          


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCC-CCceEEEEe
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPR-RSGCILCTA  168 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~vs  168 (297)
                       ..-|++|..||.... +    ..+.   .+.+..|..    +++...+.+.+. ..+.++++|
T Consensus        68 -~~adiVvitag~~~~-~----g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          68 -KGSEIIVVTAGLARK-P----GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             -TTCSEEEECCCCCCC-S----SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred             -ccccEEEEeccccCC-C----CCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEec
Confidence             267999999986521 1    2232   444555555    344444444433 345555554

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.39  E-value=0.014  Score=41.93  Aligned_cols=70  Identities=19%  Similarity=0.247  Sum_probs=51.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYN  114 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~  114 (297)
                      |.++|.|. |.+|+.+++.|  +|.+|++++.+++..+....   ..+.++..|.++++.++++      ...+.+.+|.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKA------NVRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHT------TCTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHh------hhhcCcEEEE
Confidence            45778876 78999999998  46678889999887776644   3578889999998666542      1246778875


Q ss_pred             Cc
Q 022418          115 NA  116 (297)
Q Consensus       115 ~a  116 (297)
                      ..
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            43

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.38  E-value=0.1  Score=38.87  Aligned_cols=81  Identities=12%  Similarity=0.045  Sum_probs=54.7

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHhC-------------CCeeEEEecCCCHHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKELG-------------PNATFIACDVTKESDVSDAV   99 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~-------------~~v~~~~~D~s~~~~i~~~~   99 (297)
                      |+++|.|. |-||.++++.|.+.|+  +|++.+++.+..+...+.-.             .....+.. .+.++++.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            46888876 9999999999999996  68889999887776655420             01122222 23466788888


Q ss_pred             HHHHHHcCCccEEEECcc
Q 022418          100 DFTISKHNQLDIMYNNAG  117 (297)
Q Consensus       100 ~~~~~~~g~id~li~~ag  117 (297)
                      +++.....+=.+++..++
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            887766544445555554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.36  E-value=0.12  Score=37.66  Aligned_cols=108  Identities=15%  Similarity=0.164  Sum_probs=64.0

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           36 VALITGAASGIGKATAAKFISNGA--KVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ++.|+|+ |.+|.+++..++.+|.  +++++|+++++++....++      .........  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            5677786 9999999999999886  6999999988766543333      112222221  122222           1


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                      .-|++|..||....     ...+.   .+.+..|..-.-.+.+.+.++   ...+.++++|
T Consensus        69 daDvVVitaG~~~~-----~g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQK-----PGQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CCcEEEEecccccC-----CCCch---hhhhhhhHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence            56999999996521     12333   345666665444444444332   2345555555

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.28  E-value=0.0079  Score=48.09  Aligned_cols=50  Identities=28%  Similarity=0.402  Sum_probs=43.9

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      ..+++||+++|-|- |-+|..+++.|.+.|++|++++.+....+....+.+
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            35699999999887 899999999999999999999999888887777654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.20  E-value=0.025  Score=39.75  Aligned_cols=35  Identities=23%  Similarity=0.318  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999988 89999999999999999999998875

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.15  E-value=0.022  Score=42.85  Aligned_cols=47  Identities=11%  Similarity=0.150  Sum_probs=40.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      .+++||+++|.|-|.-+|+.++..|.++|++|+++.+....+.+..+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            47999999999999999999999999999999988776655544443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.03  E-value=0.053  Score=41.77  Aligned_cols=74  Identities=19%  Similarity=0.143  Sum_probs=51.6

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...+++||++.|.|. |.||+++++.+...|.+|+..++............          ....+++++++++      
T Consensus        41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~----------~~~~~~l~~ll~~------  103 (191)
T d1gdha1          41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ----------ATFHDSLDSLLSV------  103 (191)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT----------CEECSSHHHHHHH------
T ss_pred             ccceecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc----------ccccCCHHHHHhh------
Confidence            346799999999998 89999999999999999999988665433332221          0112345555653      


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                       -|+++.+....
T Consensus       104 -sD~v~l~~plt  114 (191)
T d1gdha1         104 -SQFFSLNAPST  114 (191)
T ss_dssp             -CSEEEECCCCC
T ss_pred             -CCeEEecCCCC
Confidence             48887766544

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.95  E-value=0.025  Score=41.86  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=37.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHhC
Q 022418           35 KVALITGAASGIGKATAAKFISNG-AKVVIADIQHQLGQQTAKELG   79 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~   79 (297)
                      +++.+.|+ |-+|.++++.|.+.| ++|.+.+|+.++.+.+.++.+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~   45 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG   45 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc
Confidence            35677777 999999999999887 889999999999888877754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.021  Score=43.17  Aligned_cols=46  Identities=13%  Similarity=0.171  Sum_probs=40.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA   75 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   75 (297)
                      .+++||.++|.|-|.-+|+.++..|+++|++|.++......+.+..
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            4799999999999999999999999999999999888766554443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.85  E-value=0.025  Score=40.33  Aligned_cols=37  Identities=30%  Similarity=0.431  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .++|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            45688888877 89999999999999999999988764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.79  E-value=0.012  Score=43.50  Aligned_cols=37  Identities=22%  Similarity=0.454  Sum_probs=33.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQ   67 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~   67 (297)
                      ..++||++||.|| |.+|..-++.|.+.|++|++++-.
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5699999999999 679999999999999999998653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.76  E-value=0.059  Score=41.35  Aligned_cols=41  Identities=17%  Similarity=0.125  Sum_probs=36.3

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ...+++++++.|.|. |.||+++++.+...|.+|...++...
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            345799999999997 89999999999999999999998654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.63  E-value=0.028  Score=39.98  Aligned_cols=37  Identities=30%  Similarity=0.368  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      .+|+++|.|| |.+|.++|..|+++|.+|.++.+.+.-
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            3578888888 899999999999999999999988753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.47  E-value=0.03  Score=39.81  Aligned_cols=35  Identities=29%  Similarity=0.363  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.||.++|..|++.|.+|.++.+++.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478889988 89999999999999999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.31  E-value=0.047  Score=38.31  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            367888887 89999999999999999999999764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.29  E-value=0.063  Score=41.53  Aligned_cols=72  Identities=19%  Similarity=0.246  Sum_probs=54.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      -++.||+|+=.|+++|+   ++..++..|+ +|+.++.+.+..+...+.. .++.++.+|+.+.             -++
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-~~~~~~~~D~~~l-------------~~~  107 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-GGVNFMVADVSEI-------------SGK  107 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-TTSEEEECCGGGC-------------CCC
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-ccccEEEEehhhc-------------CCc
Confidence            47899999999999883   3344677776 5999999988776655543 5688999998542             258


Q ss_pred             ccEEEECccC
Q 022418          109 LDIMYNNAGV  118 (297)
Q Consensus       109 id~li~~ag~  118 (297)
                      .|++|.|.-.
T Consensus       108 fD~Vi~NPPf  117 (197)
T d1ne2a_         108 YDTWIMNPPF  117 (197)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEeCccc
Confidence            9999999753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.24  E-value=0.04  Score=40.71  Aligned_cols=64  Identities=16%  Similarity=0.195  Sum_probs=47.5

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNN  115 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~  115 (297)
                      ++.+.|+ |-+|.++++.|.+.|+++++.+|+.++.+++.++.+..+.      .+   .+++++       .-|+++.+
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~------~~---~~~~~~-------~~dvIila   64 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA------MS---HQDLID-------QVDLVILG   64 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC------SS---HHHHHH-------TCSEEEEC
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee------ch---hhhhhh-------ccceeeee
Confidence            4566655 9999999999999999999999999998888777654321      12   333344       46888865


Q ss_pred             c
Q 022418          116 A  116 (297)
Q Consensus       116 a  116 (297)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.05  Score=40.68  Aligned_cols=40  Identities=30%  Similarity=0.451  Sum_probs=36.1

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      ..+.||+++|.|- |-+|+.+|+.+...|++|++++.++..
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            4699999999987 689999999999999999999998743

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.10  E-value=0.28  Score=34.09  Aligned_cols=80  Identities=18%  Similarity=0.138  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH-HHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES-DVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~-~i~~~~~~~~~~~g~id~l  112 (297)
                      ||++||.=-...+-..+...|.+.|++|+..+.+.+..-+..++..  ...+.+|+.-++ +--++++++++..+.+-++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~--~dliilD~~mp~~~G~e~~~~ir~~~~~~pvi   78 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELK--PDIVTMDITMPEMNGIDAIKEIMKIDPNAKII   78 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--CSEEEEECSCGGGCHHHHHHHHHHHCTTCCEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhcc--CCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence            7899999999999999999999999999877666654444444443  445556665443 3346777777776666666


Q ss_pred             EEC
Q 022418          113 YNN  115 (297)
Q Consensus       113 i~~  115 (297)
                      +..
T Consensus        79 ~ls   81 (118)
T d1u0sy_          79 VCS   81 (118)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.90  E-value=0.04  Score=41.64  Aligned_cols=82  Identities=16%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecC--CCHHHHHHHHHHHHHHcC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDV--TKESDVSDAVDFTISKHN  107 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~--s~~~~i~~~~~~~~~~~g  107 (297)
                      .+++||.++|.|-|.=+|+-++..|+++|+.|..+.++........... .-.+....|+  -.++.+++...       
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lk~~~~-------   96 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL-KLNKHHVEDLGEYSEDLLKKCSL-------   96 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS-SCCCCEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccce-eeeeeccccccccchhHHhhccc-------
Confidence            4899999999999999999999999999999988766532100000000 0001111222  23445555554       


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      ..|++|..+|..
T Consensus        97 ~aDIvIsavG~p  108 (171)
T d1edza1          97 DSDVVITGVPSE  108 (171)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEEccCCC
Confidence            469999888864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.89  E-value=0.039  Score=39.22  Aligned_cols=37  Identities=19%  Similarity=0.308  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      -.|.++|.|| |-||.++|..|.+.|.+|.++.|++..
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            3578889888 899999999999999999999998753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.042  Score=39.12  Aligned_cols=35  Identities=20%  Similarity=0.182  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|++.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            378899988 78999999999999999999999764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.62  E-value=0.05  Score=38.28  Aligned_cols=35  Identities=17%  Similarity=0.040  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            478889888 89999999999999999999998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.62  E-value=0.058  Score=37.99  Aligned_cols=37  Identities=19%  Similarity=0.180  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      -..+.++|.|| |.||.++|..|++.|.+|.++.++..
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            34478999988 89999999999999999999988764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.61  E-value=0.046  Score=38.69  Aligned_cols=35  Identities=23%  Similarity=0.230  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      +|.++|.|| |.+|.++|..|++.|.+|.++.|++.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            478888887 89999999999999999999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.39  E-value=0.039  Score=42.48  Aligned_cols=42  Identities=14%  Similarity=0.207  Sum_probs=36.4

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE   77 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~   77 (297)
                      +.+.|.|+ |..|.++|..|++.|++|.+.+|+++..+.+...
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            46888888 7899999999999999999999999887776544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.26  E-value=0.056  Score=37.75  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            477888877 89999999999999999999988764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.20  E-value=0.082  Score=37.05  Aligned_cols=37  Identities=14%  Similarity=0.158  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ..+|.++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            45789999888 89999999999999999999998764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.19  E-value=0.11  Score=39.22  Aligned_cols=58  Identities=14%  Similarity=0.099  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----------------CCCeeEEEecCCCH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----------------GPNATFIACDVTKE   92 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------------~~~v~~~~~D~s~~   92 (297)
                      ..|++||..|++.|   ..+..|+++|++|+++|.+++.++...+..                +....++.+|..+.
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l   92 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   92 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence            46789999999988   467799999999999999999888776654                23356777787664

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.15  E-value=0.062  Score=40.82  Aligned_cols=34  Identities=26%  Similarity=0.431  Sum_probs=30.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      |++.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            56788888 89999999999999999999998544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.13  E-value=0.082  Score=40.26  Aligned_cols=39  Identities=15%  Similarity=0.147  Sum_probs=35.3

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      ..+.||++.|.|. |.||+.+++.+...|++|+..+|+..
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            3599999999998 66999999999999999999998764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.11  E-value=0.063  Score=41.58  Aligned_cols=41  Identities=15%  Similarity=0.100  Sum_probs=34.6

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      |.+.|. |.|.+|..+|..|+++|++|++.|.+.+..+.+.+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            356677 45999999999999999999999999887776654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.10  E-value=0.14  Score=40.56  Aligned_cols=103  Identities=9%  Similarity=0.112  Sum_probs=69.6

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---hCCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKE---LGPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ..++++||=.|++.|.   ++..|+++|.+|+++|.+++.++...+.   .+.++.++..|+.+.+           ..+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence            4667899999999884   7888999999999999999876655443   3567888888886532           124


Q ss_pred             CccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEE
Q 022418          108 QLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILC  166 (297)
Q Consensus       108 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~  166 (297)
                      +.|++++..+...      .-.+.++...           +++.+...|+  ++|.+|+
T Consensus       101 ~fD~i~~~~~~~~------~~~~~~~~~~-----------~l~~~~~~Lk--pgG~~i~  140 (246)
T d1y8ca_         101 KFDLITCCLDSTN------YIIDSDDLKK-----------YFKAVSNHLK--EGGVFIF  140 (246)
T ss_dssp             CEEEEEECTTGGG------GCCSHHHHHH-----------HHHHHHTTEE--EEEEEEE
T ss_pred             cccccceeeeeee------ccCCHHHHHH-----------HHHHHHHhCC--CCeEEEE
Confidence            7899987544331      1123444332           4566666664  3466664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.02  E-value=0.51  Score=35.60  Aligned_cols=47  Identities=19%  Similarity=0.150  Sum_probs=40.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL   78 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~   78 (297)
                      ....-.|+|.|| |-.|.+-++.....|+.|.+.|.+.+.++++.+..
T Consensus        26 ~V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~   72 (183)
T d1l7da1          26 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG   72 (183)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT
T ss_pred             CcCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh
Confidence            345568999998 78999999999999999999999999888876644

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.95  E-value=0.067  Score=42.15  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      .|.|+|.|| |-.|...|..|+++|++|++++|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            457888888 8999999999999999999999864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.93  E-value=0.08  Score=38.06  Aligned_cols=36  Identities=22%  Similarity=0.306  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999987 89999999999999999999998764

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.91  E-value=0.27  Score=37.81  Aligned_cols=74  Identities=20%  Similarity=0.254  Sum_probs=53.8

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+++|++||=.|++.|.   ++..++..|+ +|++++.+.+.++...+.+   +.+..++..|+.+.            
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            357899999999988772   2334456775 7999999988776665443   56778888886432            


Q ss_pred             HcCCccEEEECccC
Q 022418          105 KHNQLDIMYNNAGV  118 (297)
Q Consensus       105 ~~g~id~li~~ag~  118 (297)
                       .++.|++|.|+-.
T Consensus       107 -~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -NSRVDIVIMNPPF  119 (201)
T ss_dssp             -CCCCSEEEECCCC
T ss_pred             -CCcCcEEEEcCcc
Confidence             2489999999854

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.82  E-value=0.25  Score=32.74  Aligned_cols=69  Identities=22%  Similarity=0.233  Sum_probs=48.0

Q ss_pred             CEEEEEcCCCcHHH-HHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 022418           35 KVALITGAASGIGK-ATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMY  113 (297)
Q Consensus        35 k~vlVtGas~giG~-~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li  113 (297)
                      +++-+.|- +|+|. ++|+.|.++|+.|...|+......+..++.+.+++. .-|..+   +           ...|.+|
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~-gh~~~~---i-----------~~~d~vV   65 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFV-PHSADN---W-----------YDPDLVI   65 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEES-SCCTTS---C-----------CCCSEEE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEe-eecccc---c-----------CCCCEEE
Confidence            45666655 66776 789999999999999999886655566666654421 223222   1           3689999


Q ss_pred             ECccCC
Q 022418          114 NNAGVA  119 (297)
Q Consensus       114 ~~ag~~  119 (297)
                      ...++.
T Consensus        66 ~SsAI~   71 (89)
T d1j6ua1          66 KTPAVR   71 (89)
T ss_dssp             ECTTCC
T ss_pred             EecCcC
Confidence            999875

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.68  E-value=0.11  Score=38.04  Aligned_cols=40  Identities=20%  Similarity=0.145  Sum_probs=31.4

Q ss_pred             CCCEEEEE-cCCCcHHHHHHHHHHHCCCeEEEEeCCchhHH
Q 022418           33 EEKVALIT-GAASGIGKATAAKFISNGAKVVIADIQHQLGQ   72 (297)
Q Consensus        33 ~~k~vlVt-Gas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~   72 (297)
                      -++.++|. .+++.||.++|..|+++|++|.++.+...-+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~   78 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANY   78 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTH
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcccc
Confidence            34455554 46689999999999999999999998765443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.52  E-value=0.077  Score=37.55  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCC
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQ   67 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~   67 (297)
                      .+.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            457888887 899999999999999999999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.50  E-value=2.3  Score=34.81  Aligned_cols=147  Identities=12%  Similarity=0.153  Sum_probs=80.3

Q ss_pred             CCCCEEEEEcCC-CcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAA-SGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        32 ~~~k~vlVtGas-~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .+|++||=..+. |+++.+    .+..|+ +|+.++.+...++...+..      ..++.++..|+.      +.++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            357888866555 444433    455677 5999999988776655443      245778887773      3445555


Q ss_pred             HHcCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccch
Q 022418          104 SKHNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYS  183 (297)
Q Consensus       104 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~  183 (297)
                      .+..+.|++|..+-.+....+..  .+.          ......+++.+++.++.  +|.+++.|. +...         
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~--~~~----------~~~~~~L~~~a~~ll~p--gG~l~~~sc-s~~~---------  268 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEV--FSV----------SKDYHKLIRQGLEILSE--NGLIIASTN-AANM---------  268 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CC--CCH----------HHHHHHHHHHHHHTEEE--EEEEEEEEC-CTTS---------
T ss_pred             hhcCCCCEEEEcChhhccchhHH--HHH----------HHHHHHHHHHHHHHcCC--CCEEEEEeC-CccC---------
Confidence            55568999999875442111111  111          11233466777777743  355554432 2111         


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCCcc
Q 022418          184 VSKSAIIGLVKSMAAELCEYGIRINCISPFAIP  216 (297)
Q Consensus       184 ~sK~a~~~~~~~la~el~~~~i~v~~v~pG~v~  216 (297)
                          ..+.|...+.+...+.+.++..+..-+.|
T Consensus       269 ----~~~~f~~~v~~a~~~~~~~~~~~~~~~~D  297 (317)
T d2b78a2         269 ----TVSQFKKQIEKGFGKQKHTYLDLQQLPSD  297 (317)
T ss_dssp             ----CHHHHHHHHHHHHTTCCCEEEEEECCCTT
T ss_pred             ----CHHHHHHHHHHHHHHcCCeEEEeccCCCC
Confidence                12334444445555567777666533333

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.49  E-value=0.062  Score=40.73  Aligned_cols=37  Identities=16%  Similarity=0.111  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCe-EEEEeCCchh
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAK-VVIADIQHQL   70 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~-Vi~~~r~~~~   70 (297)
                      .+|+|+|.|| |-.|..+|..|+++|++ |+++.|+...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            4688999998 89999999999999995 9999887653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.46  E-value=0.066  Score=42.96  Aligned_cols=34  Identities=26%  Similarity=0.293  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      +|+|+|.|| |-=|..+|.+|+++|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988 7789999999999999999998754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.41  E-value=0.18  Score=33.93  Aligned_cols=71  Identities=14%  Similarity=0.242  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCCcHH-HHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           33 EEKVALITGAASGIG-KATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        33 ~~k~vlVtGas~giG-~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +.|.+.+.|- +|+| .++|+.|.++|++|...|+.....-+...+.+..+  ...+-  ++.+           ...|.
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v--~~g~~--~~~i-----------~~~d~   70 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKI--YIGHA--EEHI-----------EGASV   70 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEE--EESCC--GGGG-----------TTCSE
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeE--EECCc--cccC-----------CCCCE
Confidence            4467777776 4444 56799999999999999998665444445544432  22222  2211           26799


Q ss_pred             EEECccCC
Q 022418          112 MYNNAGVA  119 (297)
Q Consensus       112 li~~ag~~  119 (297)
                      +|...++.
T Consensus        71 vV~S~AI~   78 (96)
T d1p3da1          71 VVVSSAIK   78 (96)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCcC
Confidence            99998865

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.11  Score=40.92  Aligned_cols=76  Identities=13%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---------------------CCCeeEEEecCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---------------------GPNATFIACDVT   90 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---------------------~~~v~~~~~D~s   90 (297)
                      ..+++||..|+..|   ..+..|+++|++|+.+|-+++..+...++.                     +.++.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            46679999999988   568889999999999999999888776653                     235777888875


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccCC
Q 022418           91 KESDVSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        91 ~~~~i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      +...         ...+..|.++-.....
T Consensus       121 ~l~~---------~~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         121 DLPR---------TNIGKFDMIWDRGALV  140 (229)
T ss_dssp             GGGG---------SCCCCEEEEEESSSTT
T ss_pred             hccc---------cccCceeEEEEEEEEE
Confidence            4321         1123567776555433

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=0.11  Score=39.49  Aligned_cols=40  Identities=23%  Similarity=0.319  Sum_probs=35.2

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchh
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQL   70 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~   70 (297)
                      ...++|.|+|.|| |--|.+.|..|+++|++|+++.++...
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            3467899999998 888999999999999999999998753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.87  E-value=0.72  Score=33.63  Aligned_cols=51  Identities=24%  Similarity=0.214  Sum_probs=38.8

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC--CCeEEE--EeCCchhHHHHHHHhCCCeeEE
Q 022418           35 KVALITGAASGIGKATAAKFISN--GAKVVI--ADIQHQLGQQTAKELGPNATFI   85 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~--G~~Vi~--~~r~~~~~~~~~~~~~~~v~~~   85 (297)
                      |++.|.|+||-||.+...-..+.  .++|.+  +.+|.+.+.+...++.++..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i   56 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVM   56 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhccccc
Confidence            67999999999999999888775  356544  4566778888888887665443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.86  E-value=0.11  Score=36.92  Aligned_cols=38  Identities=18%  Similarity=0.261  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      +-..+.++|.|| |.||.++|..|.+.|.+|.++.+.+.
T Consensus        23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            334578999998 89999999999999999999988764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.84  E-value=0.11  Score=38.74  Aligned_cols=39  Identities=28%  Similarity=0.429  Sum_probs=35.7

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .-+.||+++|.|- |-+|+.+|+++...|++|+++..++-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            4589999999997 88999999999999999999999874

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.44  E-value=2.3  Score=34.68  Aligned_cols=77  Identities=13%  Similarity=0.061  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCc-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----C-CCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASG-IGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----G-PNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~-~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ++++||=..+.+| ++.    .+++.|++|+.++.+...++...+..     . .++.++..|+.      +.++....+
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            5777776655544 333    34678999999999988776665433     2 35778877763      345555555


Q ss_pred             cCCccEEEECccCC
Q 022418          106 HNQLDIMYNNAGVA  119 (297)
Q Consensus       106 ~g~id~li~~ag~~  119 (297)
                      ..+.|+||.+.-.+
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            56899999987544

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.35  E-value=0.14  Score=40.46  Aligned_cols=37  Identities=19%  Similarity=0.147  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+.++|+|.|| |--|..+|..|+++|++|+++.|+.+
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            35678999998 78899999999999999999998754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.24  E-value=0.21  Score=35.44  Aligned_cols=77  Identities=16%  Similarity=0.159  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCC----------cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHH
Q 022418           32 LEEKVALITGAAS----------GIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDF  101 (297)
Q Consensus        32 ~~~k~vlVtGas~----------giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~  101 (297)
                      -..|.+||.|+..          --+.+.+++|.+.|++++++..|++....- ....+++++   +--..+.+.++++.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-~d~aD~lYf---ePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-PEMADATYI---EPIHWEVVRKIIEK   80 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-GGGSSEEEC---SCCCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-hhhcceeee---ecCCHHHHHHHHHH
Confidence            3458899999854          346778899999999999999988743221 112344444   33346788888876


Q ss_pred             HHHHcCCccEEEECcc
Q 022418          102 TISKHNQLDIMYNNAG  117 (297)
Q Consensus       102 ~~~~~g~id~li~~ag  117 (297)
                      -     ++|.++...|
T Consensus        81 E-----~pd~il~~~G   91 (127)
T d1a9xa3          81 E-----RPDAVLPTMG   91 (127)
T ss_dssp             H-----CCSEEECSSS
T ss_pred             h-----CcCCeEEEee
Confidence            4     8999885554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.81  E-value=1.9  Score=35.32  Aligned_cols=116  Identities=12%  Similarity=0.112  Sum_probs=69.3

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ..+|++||=.++..| |.++  +++..+.+|+.++.+...++...+..   + .++.++..|..+      ..+.+....
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            357888887776655 3333  34556778999999998777665444   3 357788877743      233444444


Q ss_pred             CCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEec
Q 022418          107 NQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTAS  169 (297)
Q Consensus       107 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss  169 (297)
                      ++.|.+|.++......     ........+       ....++..+.+.++  ++|.+++.|.
T Consensus       214 ~~fD~Vi~DpP~~~~~-----~~~~~~~~~-------~~~~l~~~a~~lLk--pGG~Lv~~sc  262 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKG-----KKDVERAYR-------AYKEVNLRAIKLLK--EGGILATASC  262 (318)
T ss_dssp             CCEEEEEECCCCSCCS-----TTSHHHHHH-------HHHHHHHHHHHTEE--EEEEEEEEEC
T ss_pred             cCCCEEEEcCCccccc-----hHHHHHHHH-------HHHHHHHHHHHHcC--CCCEEEEEeC
Confidence            6899999998644211     111221111       23346677777774  3466665543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.60  E-value=1.4  Score=36.14  Aligned_cols=112  Identities=12%  Similarity=0.076  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCCc-HHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASG-IGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        33 ~~k~vlVtGas~g-iG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      .|++||=.++..| ++.    .+++.|+ +|+.++.+++.++...+..     ..+++++..|+.      +.+..+...
T Consensus       145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            4788887776544 443    3456676 6999999998776665443     245677777763      233444444


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEe
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTA  168 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vs  168 (297)
                      ..+.|.+|.++....  .      +.++....    ......++..+++.++  ++|.+++.|
T Consensus       215 ~~~fD~Vi~DpP~~~--~------~~~~~~~~----~~~y~~l~~~a~~ll~--pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFV--Q------HEKDLKAG----LRAYFNVNFAGLNLVK--DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSC--S------SGGGHHHH----HHHHHHHHHHHHTTEE--EEEEEEEEE
T ss_pred             cCCCCchhcCCcccc--C------CHHHHHHH----HHHHHHHHHHHHHHcC--CCcEEEEEe
Confidence            468999999886442  1      11111111    2234446777777774  346666655

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.53  E-value=0.13  Score=41.18  Aligned_cols=31  Identities=19%  Similarity=0.254  Sum_probs=28.5

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 8999999999999999999999875

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.37  E-value=0.17  Score=37.35  Aligned_cols=35  Identities=11%  Similarity=0.177  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC--eEEEEeCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA--KVVIADIQH   68 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~--~Vi~~~r~~   68 (297)
                      .||+++|.|| |..|..+|..|.+++.  +|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999999 7889999999999885  688887765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.17  E-value=0.27  Score=35.77  Aligned_cols=39  Identities=15%  Similarity=0.126  Sum_probs=31.1

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTA   75 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   75 (297)
                      ++-|.|. |-+|.++++.|.++|++|++.+++.+......
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            4566655 99999999999999999999888776554443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.05  E-value=0.078  Score=42.31  Aligned_cols=36  Identities=28%  Similarity=0.511  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQ   67 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~   67 (297)
                      ++++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            589999999996 8999999999999998 57777654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.98  E-value=0.64  Score=33.81  Aligned_cols=78  Identities=10%  Similarity=0.124  Sum_probs=52.0

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhC---------CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELG---------PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---------~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +-+.|- |-+|.+++++|.+.|+.+ +..|+.++..+..++.+         .+...+...+.+.+++......+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            455665 899999999999988755 57888777766665541         1233444556677788877777765544


Q ss_pred             CccEEEECc
Q 022418          108 QLDIMYNNA  116 (297)
Q Consensus       108 ~id~li~~a  116 (297)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            444555444

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.96  E-value=0.21  Score=39.11  Aligned_cols=38  Identities=24%  Similarity=0.368  Sum_probs=33.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .-++|.++|.|| |--|...|..|+++|++|+++.++.+
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            457899999998 78899999999999999999987765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.86  E-value=0.16  Score=41.30  Aligned_cols=37  Identities=22%  Similarity=0.300  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      -+.|.|+|.|| |--|..+|..|+++|++|+++.++..
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            45678999998 77899999999999999999987653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.61  Score=38.12  Aligned_cols=73  Identities=22%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHH--HHHh--CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQT--AKEL--GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~--~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..+||+||-.|++.|+   ++..++++|+ +|++++.++......  ....  ..++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            4689999999999886   5667788897 699999887543211  1221  4678888888876421          1


Q ss_pred             cCCccEEEECc
Q 022418          106 HNQLDIMYNNA  116 (297)
Q Consensus       106 ~g~id~li~~a  116 (297)
                      ..+.|+++...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            24789998754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.60  E-value=0.39  Score=36.65  Aligned_cols=79  Identities=11%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      +.++=+|.|+||.-.++.+.+ . +.+|+++|++++.++...+.+   +.++.++..++++...   .+...  ..+++|
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~---~~~~~--~~~~vd   97 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF---LLKTL--GIEKVD   97 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH---HHHHT--TCSCEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH---HHHHc--CCCCcc
Confidence            345557888899988888876 3 468999999999887776654   6679999998876433   23322  125899


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      .++.-.|++
T Consensus        98 gIl~DlGvS  106 (192)
T d1m6ya2          98 GILMDLGVS  106 (192)
T ss_dssp             EEEEECSCC
T ss_pred             eeeeccchh
Confidence            999998875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.57  E-value=0.45  Score=34.74  Aligned_cols=52  Identities=21%  Similarity=0.232  Sum_probs=39.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHC--CCeEEE--EeCCchhHHHHHHHhCCCeeEE
Q 022418           34 EKVALITGAASGIGKATAAKFISN--GAKVVI--ADIQHQLGQQTAKELGPNATFI   85 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~--G~~Vi~--~~r~~~~~~~~~~~~~~~v~~~   85 (297)
                      .|++.|.|+||-||.+..+-+.+.  .++|++  +.+|.+.+.+...++.++..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhcccccee
Confidence            589999999999999998888775  466654  4566678888888887665543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.39  E-value=0.99  Score=32.31  Aligned_cols=84  Identities=11%  Similarity=0.084  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCC---CcHHHHHHHHHHHCCCeEEEEeCCchhHH-----HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           33 EEKVALITGAA---SGIGKATAAKFISNGAKVVIADIQHQLGQ-----QTAKELGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        33 ~~k~vlVtGas---~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      +-|.+.|.|+|   +..|..+.+.|.+.|++|+.+.-..+...     ....++...+..+.. +..++.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            56899999999   57999999999999999988765433211     111222233433322 2467888889998887


Q ss_pred             HcCCccEEEECccCC
Q 022418          105 KHNQLDIMYNNAGVA  119 (297)
Q Consensus       105 ~~g~id~li~~ag~~  119 (297)
                      .  ++..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            6  567888888754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.26  E-value=0.23  Score=41.06  Aligned_cols=36  Identities=28%  Similarity=0.368  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      +.|.++|.|| |--|..+|..|+++|++|+++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999998 78899999999999999999877664

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.15  E-value=0.47  Score=34.47  Aligned_cols=35  Identities=9%  Similarity=0.115  Sum_probs=26.1

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCC----CeEEEEeCCch
Q 022418           35 KVALITGAASGIGKATAAKFISNG----AKVVIADIQHQ   69 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G----~~Vi~~~r~~~   69 (297)
                      |.|.|.||||-+|+.+.+.|.++.    .++....++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            478899999999999999877653    23555555543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.13  E-value=0.51  Score=36.93  Aligned_cols=72  Identities=17%  Similarity=0.197  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      -+++++|=.|+++|   ..+..|+++|++|++++-+++-++...+..   +.++.+...|+.+..           ..+.
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----------~~~~  105 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----------FKNE  105 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----------CCSC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----------cccc
Confidence            34578999999887   556779999999999999988766555443   557889999986532           0136


Q ss_pred             ccEEEECcc
Q 022418          109 LDIMYNNAG  117 (297)
Q Consensus       109 id~li~~ag  117 (297)
                      .|.+++.-+
T Consensus       106 fD~I~~~~~  114 (251)
T d1wzna1         106 FDAVTMFFS  114 (251)
T ss_dssp             EEEEEECSS
T ss_pred             cchHhhhhh
Confidence            898887544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.59  E-value=0.47  Score=38.72  Aligned_cols=25  Identities=20%  Similarity=0.294  Sum_probs=22.1

Q ss_pred             CCcHHHHHHHHHHHCCCeEEEEeCC
Q 022418           43 ASGIGKATAAKFISNGAKVVIADIQ   67 (297)
Q Consensus        43 s~giG~~ia~~l~~~G~~Vi~~~r~   67 (297)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5679999999999999999998654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.46  E-value=0.29  Score=38.90  Aligned_cols=36  Identities=31%  Similarity=0.337  Sum_probs=31.9

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeC
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIADI   66 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r   66 (297)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|+.++-
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            379999999997 599999999999999999987653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.41  E-value=0.24  Score=38.11  Aligned_cols=32  Identities=19%  Similarity=0.220  Sum_probs=28.1

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      |+|.|| |--|..+|..|+++|.+|+++.++..
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            677775 88899999999999999999988753

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.28  E-value=0.25  Score=39.63  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=31.5

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD   65 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~   65 (297)
                      .+++||+++|-| .|-+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            479999999998 59999999999999999988764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.24  E-value=0.21  Score=40.16  Aligned_cols=39  Identities=21%  Similarity=0.290  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCCcHHHHH-----HHHHHHCCCeEEEEeCCch
Q 022418           31 KLEEKVALITGAASGIGKAT-----AAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~i-----a~~l~~~G~~Vi~~~r~~~   69 (297)
                      .-.++.++|+.|-||+|+..     |..|+++|.+|+++|-+.+
T Consensus        16 ~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          16 ARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             hcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            34677888888899999986     7999999999999999865

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.19  E-value=0.17  Score=37.65  Aligned_cols=81  Identities=12%  Similarity=0.169  Sum_probs=52.2

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHC-CCeEEE-EeCCchh-HHHHH-----------------HHhCCCeeEEEecCCCHHH
Q 022418           35 KVALITGAASGIGKATAAKFISN-GAKVVI-ADIQHQL-GQQTA-----------------KELGPNATFIACDVTKESD   94 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~-G~~Vi~-~~r~~~~-~~~~~-----------------~~~~~~v~~~~~D~s~~~~   94 (297)
                      .++.|.|++|-+|+++++...+. ++.++. ++|.... .....                 +..-.... +..|+|.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            47999999999999999998885 555433 3443211 00000                 00001122 5579999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccC
Q 022418           95 VSDAVDFTISKHNQLDIMYNNAGV  118 (297)
Q Consensus        95 i~~~~~~~~~~~g~id~li~~ag~  118 (297)
                      ..+.++.+.+.  ++..|+-..|.
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99999887665  67788766653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.18  E-value=0.37  Score=39.34  Aligned_cols=36  Identities=19%  Similarity=0.258  Sum_probs=32.4

Q ss_pred             ccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEe
Q 022418           29 SRKLEEKVALITGAASGIGKATAAKFISNGAKVVIAD   65 (297)
Q Consensus        29 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~   65 (297)
                      ..+++||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            35799999999987 8999999999999999988775

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=88.13  E-value=4  Score=30.59  Aligned_cols=147  Identities=11%  Similarity=0.085  Sum_probs=82.9

Q ss_pred             CccCCCCCEEEEEcCCC--cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           28 ESRKLEEKVALITGAAS--GIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ......|.++++.....  ....+++..|.+.|..++.+.-...                    .+.+.+..    ....
T Consensus        19 ~~~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------~~~~~l~~----~~~~   74 (209)
T d2fr1a2          19 EPARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------CGRDELAE----RLRS   74 (209)
T ss_dssp             CCCCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------CCHHHHHH----HHTT
T ss_pred             CCCCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------cCHHHHHH----Hhhc
Confidence            33456666666654433  4777888899999988766543321                    12222222    2234


Q ss_pred             cCCccEEEECccCCCCCCCccCCCCHHHHHHHHHHhhhHHHHHHHHHHHhccCCCCceEEEEecccccccCCCCccchhh
Q 022418          106 HNQLDIMYNNAGVACKTPRSIVDLNLEVFDQVMRINVRGVVAGIKHSTRVMIPRRSGCILCTASVTGLLGGLAQHTYSVS  185 (297)
Q Consensus       106 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  185 (297)
                      .+.++.+|+..+......... +..        .......+.++|++..   .....++.+++....... .....-...
T Consensus        75 ~~~~~~vv~l~~~~~~~~~~~-~~~--------~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~~-~~d~~~~p~  141 (209)
T d2fr1a2          75 VGEVAGVLSLLAVDEAEPEEA-PLA--------LASLADTLSLVQAMVS---AELGCPLWTVTESAVATG-PFERVRNAA  141 (209)
T ss_dssp             SCCCSEEEECTTTTCCCCSSC-GGG--------CHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCSS-TTSCCSCGG
T ss_pred             cCCCCeEEEeCCCCCCCCcch-hHH--------HHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCcccC-CCcccCCHh
Confidence            467889999877542111111 110        1113344556666544   233456777765443222 222344678


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEe
Q 022418          186 KSAIIGLVKSMAAELCEYGIRINCIS  211 (297)
Q Consensus       186 K~a~~~~~~~la~el~~~~i~v~~v~  211 (297)
                      .+++.+|+|.++.|+...-+++..+-
T Consensus       142 ~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         142 HGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             GHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             HHhHHHHHHHHHHhCCCceEEEEECC
Confidence            89999999999999876555555553

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.09  E-value=0.44  Score=33.31  Aligned_cols=75  Identities=9%  Similarity=0.118  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCC----------cHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           34 EKVALITGAAS----------GIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        34 ~k~vlVtGas~----------giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .|.+||.|+..          --+.+.+++|.++|++++++..|++....- .+..+++++   +--..+.+.++++.- 
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-~d~aD~lYf---eplt~e~v~~Ii~~E-   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-YDTSDRLYF---EPVTLEDVLEIVRIE-   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-TTSSSEEEC---CCCSHHHHHHHHHHH-
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-hhhcCceEE---ccCCHHHHHHHHHHh-
Confidence            47899999864          346688899999999999999988643211 112333333   222457777777654 


Q ss_pred             HHcCCccEEEECcc
Q 022418          104 SKHNQLDIMYNNAG  117 (297)
Q Consensus       104 ~~~g~id~li~~ag  117 (297)
                          ++|.++...|
T Consensus        79 ----~p~~ii~~~G   88 (121)
T d1a9xa4          79 ----KPKGVIVQYG   88 (121)
T ss_dssp             ----CCSEEECSSS
T ss_pred             ----CCCEEEeehh
Confidence                7898886655

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=87.90  E-value=1.5  Score=34.71  Aligned_cols=71  Identities=21%  Similarity=0.232  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      ...|++||=.|+++|+-   +..+++.|++|+.+|.+++.++...+..   +.++.++..|+.+      .+     ..+
T Consensus       118 ~~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGC
T ss_pred             cCccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----ccc
Confidence            46789999999999863   3457788999999999998777665433   5566677766421      11     235


Q ss_pred             CccEEEEC
Q 022418          108 QLDIMYNN  115 (297)
Q Consensus       108 ~id~li~~  115 (297)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            78999876

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.77  E-value=0.44  Score=36.92  Aligned_cols=71  Identities=10%  Similarity=0.102  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~  111 (297)
                      ++++.||=.|++.|   .++..|+++|.+|++++-+++.++...+.....+.++..|+.+..           ..++.|+
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~-----------~~~~fD~   84 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ-----------LPRRYDN   84 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC-----------CSSCEEE
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhcccccccccccccccccc-----------ccccccc
Confidence            56788999999888   456778999999999999998888777776667888888775431           1136898


Q ss_pred             EEECc
Q 022418          112 MYNNA  116 (297)
Q Consensus       112 li~~a  116 (297)
                      ++...
T Consensus        85 I~~~~   89 (225)
T d2p7ia1          85 IVLTH   89 (225)
T ss_dssp             EEEES
T ss_pred             ccccc
Confidence            88654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.53  E-value=0.99  Score=34.72  Aligned_cols=77  Identities=16%  Similarity=0.278  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      .|.+||-.|+.+|--.++..++...+.+|+.++.+++..+...+.+    -.++.++..|..+..          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            4679999999888776665555555668999999988776665544    245666776764311          12246


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      .|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            89999888754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.46  E-value=1.1  Score=33.97  Aligned_cols=74  Identities=19%  Similarity=0.156  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      ++.+||=.|+++|.   ++..|++.|++|+++|.+.+.++..++..   +..+..+..|..+..        .  ..+..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~--------~--~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS--------F--EDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--------S--CTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc--------c--cCcCc
Confidence            34578999999885   66788999999999999988776655433   556777888877632        0  11368


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |+++++..+.
T Consensus       104 D~I~~~~~l~  113 (226)
T d1ve3a1         104 DYVIFIDSIV  113 (226)
T ss_dssp             EEEEEESCGG
T ss_pred             eEEEEecchh
Confidence            9988776543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.29  E-value=0.22  Score=34.03  Aligned_cols=41  Identities=7%  Similarity=0.129  Sum_probs=33.4

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .+.+++||+|+|.|+ |-=|..+|..|++.+.+++...|+..
T Consensus        26 ~~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          26 EPELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CGGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             chhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            446799999999998 47788999999998888777766543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.05  E-value=0.31  Score=38.95  Aligned_cols=31  Identities=23%  Similarity=0.481  Sum_probs=27.8

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      |+|.|| |-.|..+|.+|+++|.+|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            678877 8999999999999999999998864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.87  E-value=0.71  Score=31.72  Aligned_cols=35  Identities=29%  Similarity=0.226  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHH---CCCeEEEEeCCch
Q 022418           34 EKVALITGAASGIGKATAAKFIS---NGAKVVIADIQHQ   69 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~---~G~~Vi~~~r~~~   69 (297)
                      .|.++|.|| |.+|.++|..|++   .|.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478999998 8999999987665   4889999988764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.68  E-value=1.9  Score=32.01  Aligned_cols=72  Identities=21%  Similarity=0.293  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      +|.+||=.|+++|   .++..+++.+.+|+.++.+++.++...+..     ..++.++.+|..+          .....+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5678888888877   344556777889999999998776665443     3578888887521          112335


Q ss_pred             CccEEEECcc
Q 022418          108 QLDIMYNNAG  117 (297)
Q Consensus       108 ~id~li~~ag  117 (297)
                      ..|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7899987654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.43  E-value=0.34  Score=39.19  Aligned_cols=32  Identities=22%  Similarity=0.368  Sum_probs=27.7

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           36 VALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3788887 7999999999999996 599998874

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.37  E-value=0.6  Score=36.73  Aligned_cols=35  Identities=20%  Similarity=0.263  Sum_probs=29.8

Q ss_pred             cCCCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEe
Q 022418           30 RKLEEKVALITGAASGIGKATAAKFIS-NGAKVVIAD   65 (297)
Q Consensus        30 ~~~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~   65 (297)
                      .+++|++++|-| .|-+|..+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468999999886 69999999999985 599988765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.05  E-value=0.35  Score=35.80  Aligned_cols=31  Identities=19%  Similarity=0.164  Sum_probs=26.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEE
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIA   64 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~   64 (297)
                      +++.|+|.|| |.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678888888 899999999999999875554

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.03  E-value=1.7  Score=32.54  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---C-CCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---G-PNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      .++++.||=.|++.|.   .+..|+++|++|++++-+++.++...+..   + ..+.+...|+.+..     .      -
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~------~   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----F------D   93 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----C------C
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----c------c
Confidence            3566789999997763   56789999999999999988776554333   3 34677788876542     0      1


Q ss_pred             CCccEEEECccC
Q 022418          107 NQLDIMYNNAGV  118 (297)
Q Consensus       107 g~id~li~~ag~  118 (297)
                      +..|.++.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            367999876643

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.99  E-value=2.3  Score=30.81  Aligned_cols=81  Identities=19%  Similarity=0.236  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeE-EEecCC---CHHHHHHHHHHHHHHcCC
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATF-IACDVT---KESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~-~~~D~s---~~~~i~~~~~~~~~~~g~  108 (297)
                      +|+++.|.+.+||.|.-++..+.+.|.++  ..-+++..+++.+.+...... -..|++   +++...++++.+.+. +.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-PN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-TT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-CC
Confidence            68999999999999999999999999766  344444445554444322111 134443   566777777766543 57


Q ss_pred             ccEEEECc
Q 022418          109 LDIMYNNA  116 (297)
Q Consensus       109 id~li~~a  116 (297)
                      +|.++...
T Consensus        79 vd~v~v~~   86 (163)
T d2csua3          79 VDMLIAIC   86 (163)
T ss_dssp             CSEEEEEE
T ss_pred             cCEEEEee
Confidence            88776544

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.95  E-value=1.2  Score=34.40  Aligned_cols=76  Identities=20%  Similarity=0.224  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HhC-CCeeEEEecCCCHHHHHHHHHHHHHHcC
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK---ELG-PNATFIACDVTKESDVSDAVDFTISKHN  107 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~---~~~-~~v~~~~~D~s~~~~i~~~~~~~~~~~g  107 (297)
                      -+|.+||..|+.+|--.++.-+++  |.+|+.+.++++..+...+   +.+ .++.++..|..+.          ....+
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGC
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccC
Confidence            356799999999998888877776  4679999999765544433   333 6788889988642          12235


Q ss_pred             CccEEEECccCC
Q 022418          108 QLDIMYNNAGVA  119 (297)
Q Consensus       108 ~id~li~~ag~~  119 (297)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            889999888754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.90  E-value=0.19  Score=43.57  Aligned_cols=36  Identities=22%  Similarity=0.429  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCc
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQH   68 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~   68 (297)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            67789999999 7899999999999998 588887654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.79  E-value=0.31  Score=38.62  Aligned_cols=33  Identities=21%  Similarity=0.243  Sum_probs=29.0

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      +.|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            46889998 7889999999999999999998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.73  E-value=0.68  Score=31.91  Aligned_cols=36  Identities=17%  Similarity=0.120  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHC---CCeEEEEeCCch
Q 022418           33 EEKVALITGAASGIGKATAAKFISN---GAKVVIADIQHQ   69 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~---G~~Vi~~~r~~~   69 (297)
                      ..+.++|.|| |.+|.++|..|.+.   |.+|.++.|.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3578999998 99999999776654   457999988664

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.11  E-value=0.55  Score=38.28  Aligned_cols=34  Identities=21%  Similarity=0.293  Sum_probs=23.4

Q ss_pred             CEEEEEcC-CCcH---HHHHHHHHHHCCCeEEEEeCCc
Q 022418           35 KVALITGA-ASGI---GKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        35 k~vlVtGa-s~gi---G~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      |+++|++| |||-   ..+++++|.++|++|..++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            45555554 4333   4468999999999998776544

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.09  E-value=0.46  Score=35.98  Aligned_cols=40  Identities=15%  Similarity=0.138  Sum_probs=32.5

Q ss_pred             CEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 022418           35 KVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAK   76 (297)
Q Consensus        35 k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~   76 (297)
                      |.+.|.| .|.+|..+|..|+ +|++|++.|-+++..+++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhh
Confidence            4567776 6999999998775 69999999999987776654

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.82  E-value=3.6  Score=30.53  Aligned_cols=69  Identities=9%  Similarity=0.092  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCCCc-------------HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHH
Q 022418           32 LEEKVALITGAASG-------------IGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDA   98 (297)
Q Consensus        32 ~~~k~vlVtGas~g-------------iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~   98 (297)
                      +++|++++.|-|-.             -+..+++.|-..+.+|+-.+.+-+........                   ..
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~-------------------~~   61 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND-------------------GQ   61 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS-------------------SH
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh-------------------hh
Confidence            46899999998833             34455555544566665444443322222110                   12


Q ss_pred             HHHHHHHcCCccEEEECccCC
Q 022418           99 VDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        99 ~~~~~~~~g~id~li~~ag~~  119 (297)
                      +........+.|++|...|..
T Consensus        62 ~~~~~~~~~~~D~vvi~~G~N   82 (208)
T d2o14a2          62 LEAILKYIKPGDYFMLQLGIN   82 (208)
T ss_dssp             HHHHHTTCCTTCEEEEECCTG
T ss_pred             HHHHHHhcCCCCEEEEEcCCC
Confidence            233333445679999888865

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=84.77  E-value=2.7  Score=33.49  Aligned_cols=73  Identities=19%  Similarity=0.202  Sum_probs=47.5

Q ss_pred             CEEEEEcCCCc-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHcCC
Q 022418           35 KVALITGAASG-IGKATAAKFISNGAKVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKHNQ  108 (297)
Q Consensus        35 k~vlVtGas~g-iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~  108 (297)
                      ++++-.|+++| |+.+++ +  ...++|++++.+++.++-..+-.     ..++.+...|+.+.         .....++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45665555555 555543 2  35678999999998766554332     34567778888654         2223468


Q ss_pred             ccEEEECccCC
Q 022418          109 LDIMYNNAGVA  119 (297)
Q Consensus       109 id~li~~ag~~  119 (297)
                      +|++|.|.-..
T Consensus       180 fDlIVsNPPYI  190 (271)
T d1nv8a_         180 IEMILSNPPYV  190 (271)
T ss_dssp             CCEEEECCCCB
T ss_pred             ccEEEEccccc
Confidence            99999998755

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.76  E-value=1.8  Score=33.44  Aligned_cols=77  Identities=21%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh---------CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL---------GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---------~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      .|.+||-.|+.+|--.++..++.....+|+.++++++..+...+.+         ..++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            5679999999999888888888877789999999998766554433         245667777764211          


Q ss_pred             HHcCCccEEEECccCC
Q 022418          104 SKHNQLDIMYNNAGVA  119 (297)
Q Consensus       104 ~~~g~id~li~~ag~~  119 (297)
                      ...++.|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1224789999888754

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=83.46  E-value=1.7  Score=33.77  Aligned_cols=74  Identities=22%  Similarity=0.128  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .|.+||-.|+++|--.++   |++.+.+|+.++++++..+...+.+  ..++.++..|..+.          ..+.++.|
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc----------chhhhhHH
Confidence            566899999998865444   6666789999999888766555444  35678888887531          01235789


Q ss_pred             EEEECccCC
Q 022418          111 IMYNNAGVA  119 (297)
Q Consensus       111 ~li~~ag~~  119 (297)
                      .++.+++..
T Consensus       137 ~Iiv~~a~~  145 (224)
T d1vbfa_         137 RVVVWATAP  145 (224)
T ss_dssp             EEEESSBBS
T ss_pred             HHHhhcchh
Confidence            999887643

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.44  E-value=0.83  Score=32.88  Aligned_cols=35  Identities=11%  Similarity=0.162  Sum_probs=27.0

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCC---eEEEEeCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGA---KVVIADIQH   68 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~---~Vi~~~r~~   68 (297)
                      .++|.|.||||-.|+++++.|.++++   ++..++.+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            46899999999999999999987653   455554443

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=83.15  E-value=2.7  Score=34.27  Aligned_cols=80  Identities=16%  Similarity=0.077  Sum_probs=43.7

Q ss_pred             CEEEEEcCCCcHH---HHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCC----------------HHHH
Q 022418           35 KVALITGAASGIG---KATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTK----------------ESDV   95 (297)
Q Consensus        35 k~vlVtGas~giG---~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~----------------~~~i   95 (297)
                      |+++.++||+|-=   .++|++|+++|++|++++..  ...+..+..+..+..+..+...                ...+
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLPP--DYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV   79 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECG--GGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEECh--hhHhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHHHH
Confidence            4455577775433   34889999999999888742  2334444443332222222110                1123


Q ss_pred             HHHHHHHHHHcCCccEEEECc
Q 022418           96 SDAVDFTISKHNQLDIMYNNA  116 (297)
Q Consensus        96 ~~~~~~~~~~~g~id~li~~a  116 (297)
                      ...++.+.....++|.+|...
T Consensus        80 ~~~~~~l~~~~~~~D~vi~~~  100 (391)
T d1pn3a_          80 AEWFDKVPAAIEGCDAVVTTG  100 (391)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHHHHHHhcCCCeEEEcc
Confidence            444455555555788887643

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=83.07  E-value=3.7  Score=27.96  Aligned_cols=79  Identities=15%  Similarity=0.105  Sum_probs=53.2

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCC--CHHHHHHHHHHHHHHcCCccE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVT--KESDVSDAVDFTISKHNQLDI  111 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s--~~~~i~~~~~~~~~~~g~id~  111 (297)
                      +|+|||.=-...+-..+.+.|.+.|++|..+....+.++...+ ..  ...+.+|+.  +.+. -++++++++....+-+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~-~~--~dlillD~~mP~~~G-~el~~~lr~~~~~~pv   76 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTK-ER--PDLVLLDMKIPGMDG-IEILKRMKVIDENIRV   76 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH-HC--CSEEEEESCCTTCCH-HHHHHHHHHHCTTCEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHh-CC--CCEEEEeccCCCCCH-HHHHHHHHHhCCCCcE
Confidence            5789999999999999999999999999866655554444433 33  445555665  3333 3567777776665656


Q ss_pred             EEECc
Q 022418          112 MYNNA  116 (297)
Q Consensus       112 li~~a  116 (297)
                      ++..+
T Consensus        77 i~lt~   81 (119)
T d1peya_          77 IIMTA   81 (119)
T ss_dssp             EEEES
T ss_pred             EEEec
Confidence            55443

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.96  E-value=3.7  Score=28.04  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=53.4

Q ss_pred             CEEEEEcCC---CcHHHHHHHHHHHCCCeEEEEeCCchhHH-----HHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           35 KVALITGAA---SGIGKATAAKFISNGAKVVIADIQHQLGQ-----QTAKELGPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        35 k~vlVtGas---~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      |.+.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...     ....++...+.... =...++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence            789999999   46899999999999999888754433211     11122233344332 234677788888888765 


Q ss_pred             CCccEEEECccC
Q 022418          107 NQLDIMYNNAGV  118 (297)
Q Consensus       107 g~id~li~~ag~  118 (297)
                       ++..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             46677766653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.82  E-value=1.9  Score=32.22  Aligned_cols=72  Identities=15%  Similarity=0.146  Sum_probs=49.2

Q ss_pred             CCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccCC
Q 022418           42 AASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKESDVSDAVDFTISKHNQLDIMYNNAGVA  119 (297)
Q Consensus        42 as~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id~li~~ag~~  119 (297)
                      ||-|-|-+ .+.+++++.+|+++||+++..+........++.++..++++.++   .+...  ..+++|.++..-|+.
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~---~l~~~--~~~~vdgIl~DLGvS   96 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR---HLAAL--GVERVDGILADLGVS   96 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH---HHHHT--TCSCEEEEEEECSCC
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHH---HHHHc--CCCccCEEEEEccCC
Confidence            44333334 45556667799999999987766655456678888988876433   33332  135899999999876

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.71  E-value=0.65  Score=36.11  Aligned_cols=36  Identities=25%  Similarity=0.435  Sum_probs=30.1

Q ss_pred             EEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHH
Q 022418           37 ALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQ   73 (297)
Q Consensus        37 vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~   73 (297)
                      |+|.|| |--|..+|..|+++|.+|+++.++......
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g~~   40 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLGRK   40 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCCcc
Confidence            678887 688999999999999999999987654333

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=82.63  E-value=1.5  Score=34.27  Aligned_cols=75  Identities=15%  Similarity=0.096  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHHHHc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTISKH  106 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~~~~  106 (297)
                      ++++||=.|++.|   ..+..+++.|. +|+++|.+++.++...+..     ..++.+..+|..+..-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            5789999999877   23556777775 6999999999877766543     2357888999854311         011


Q ss_pred             CCccEEEECccCC
Q 022418          107 NQLDIMYNNAGVA  119 (297)
Q Consensus       107 g~id~li~~ag~~  119 (297)
                      +..|+++++-++.
T Consensus        92 ~~fD~V~~~~~l~  104 (252)
T d1ri5a_          92 KEFDVISSQFSFH  104 (252)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             ccceEEEEcceee
Confidence            3689998876654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.54  E-value=4.2  Score=28.95  Aligned_cols=73  Identities=15%  Similarity=0.252  Sum_probs=47.7

Q ss_pred             CCCCCEEEEEcCCCc-HHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHh-----CCCeeEEEecCCCHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASG-IGKATAAKFISNGA-KVVIADIQHQLGQQTAKEL-----GPNATFIACDVTKESDVSDAVDFTI  103 (297)
Q Consensus        31 ~~~~k~vlVtGas~g-iG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~~~  103 (297)
                      +++|+.+|=.|+.+| +|.    ..+.+|+ +|+.++.+.+..+...+..     ..++.+++.|..+      .++.  
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~--   79 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDC--   79 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHH--
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccc--
Confidence            478998887766555 554    3456776 6999999988766554443     3457888887532      2222  


Q ss_pred             HHcCCccEEEECc
Q 022418          104 SKHNQLDIMYNNA  116 (297)
Q Consensus       104 ~~~g~id~li~~a  116 (297)
                       ..++.|+++.++
T Consensus        80 -~~~~fDiIf~DP   91 (152)
T d2esra1          80 -LTGRFDLVFLDP   91 (152)
T ss_dssp             -BCSCEEEEEECC
T ss_pred             -cccccceeEech
Confidence             235789998765

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.26  E-value=0.57  Score=36.12  Aligned_cols=34  Identities=24%  Similarity=0.354  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCCcHHHH-----HHHHHHHCCCeEEEEeCC
Q 022418           34 EKVALITGAASGIGKA-----TAAKFISNGAKVVIADIQ   67 (297)
Q Consensus        34 ~k~vlVtGas~giG~~-----ia~~l~~~G~~Vi~~~r~   67 (297)
                      +|++.|+|+-||.|+.     +|..|++.|.+|+++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6889999999999975     568888999999999865

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.17  E-value=0.96  Score=34.66  Aligned_cols=84  Identities=12%  Similarity=0.113  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCcHHHHHH----HHHHHC-----CCeEEEEeCCchhHHHHHHHh-----------------CCCeeEEE
Q 022418           33 EEKVALITGAASGIGKATA----AKFISN-----GAKVVIADIQHQLGQQTAKEL-----------------GPNATFIA   86 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia----~~l~~~-----G~~Vi~~~r~~~~~~~~~~~~-----------------~~~v~~~~   86 (297)
                      ..-+.+|.||||.+-+.-.    -+|...     +..|++++|++-..++..+..                 -.++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            3457999999998875432    223333     456999999765444443332                 24678889


Q ss_pred             ecCCCHHHHHHHHHHHHHHc-C-CccEEEECc
Q 022418           87 CDVTKESDVSDAVDFTISKH-N-QLDIMYNNA  116 (297)
Q Consensus        87 ~D~s~~~~i~~~~~~~~~~~-g-~id~li~~a  116 (297)
                      +|++++++..++-+.+.+.. + ..+.+++.|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999999888877665432 1 334666666

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.89  E-value=1.1  Score=34.27  Aligned_cols=40  Identities=10%  Similarity=0.171  Sum_probs=33.6

Q ss_pred             CccCCCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCc
Q 022418           28 ESRKLEEKVALITGAASGIGKATAAKFISNGAKVVIADIQH   68 (297)
Q Consensus        28 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~   68 (297)
                      ...+++||.|+|.|++ -=|..+|..+++.+.+++.+.|+.
T Consensus        26 ~~~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          26 EPVDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             SCCCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCCCEEEEECCC-ccHHHHHHHHHhhhcccccccccc
Confidence            3457999999999885 458999999999999988887764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.75  E-value=0.23  Score=39.99  Aligned_cols=64  Identities=17%  Similarity=0.210  Sum_probs=44.2

Q ss_pred             cccccchhhhhhhhhhhccCCCCCccCCCCCEEEEEcCCCcHHHHHHHHHHH-CCCeEEEEeCCch
Q 022418            5 GLSKKVPISIALLAERCSRGLSTESRKLEEKVALITGAASGIGKATAAKFIS-NGAKVVIADIQHQ   69 (297)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~-~G~~Vi~~~r~~~   69 (297)
                      +-+...|+..+-+.+-++|.+....+...+.-|+|.|| |-=|..+|.+|++ .|.+|+++++.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1           4 NAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             TSCCCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             cCceeecchHHHHhHHHHHhhhcccccccCCCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            34455555555544444443333344556667999999 7889999999998 5999999998753

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=81.71  E-value=0.44  Score=36.28  Aligned_cols=31  Identities=19%  Similarity=0.238  Sum_probs=27.1

Q ss_pred             CEEEEEcCCCcHHHH-----HHHHHHHCCCeEEEEe
Q 022418           35 KVALITGAASGIGKA-----TAAKFISNGAKVVIAD   65 (297)
Q Consensus        35 k~vlVtGas~giG~~-----ia~~l~~~G~~Vi~~~   65 (297)
                      |..+|||-++|+|+.     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999899975     5688999999999986

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.56  E-value=2.8  Score=34.07  Aligned_cols=73  Identities=23%  Similarity=0.226  Sum_probs=49.8

Q ss_pred             CCCCCEEEEEcCCCcHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH---H--hCCCeeEEEecCCCHHHHHHHHHHHHH
Q 022418           31 KLEEKVALITGAASGIGKATAAKFISNGA-KVVIADIQHQLGQQTAK---E--LGPNATFIACDVTKESDVSDAVDFTIS  104 (297)
Q Consensus        31 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~---~--~~~~v~~~~~D~s~~~~i~~~~~~~~~  104 (297)
                      ..+||+||-.|++.|+   ++..++++|+ +|++++.++.. ....+   .  ...++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            4689999999999885   4566788886 59999987642 22222   1  24668888888876421          


Q ss_pred             HcCCccEEEECcc
Q 022418          105 KHNQLDIMYNNAG  117 (297)
Q Consensus       105 ~~g~id~li~~ag  117 (297)
                      ..+++|+++....
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            1247899987543

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=81.25  E-value=2  Score=29.39  Aligned_cols=81  Identities=7%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHhCCCeeEEEecCCCHH-HHHHHHHHHHHHcCCccEE
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKELGPNATFIACDVTKES-DVSDAVDFTISKHNQLDIM  112 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~v~~~~~D~s~~~-~i~~~~~~~~~~~g~id~l  112 (297)
                      ..++||.=-...+...+...|.+.|+.|..+....+.++...+..  ....+.+|+.-++ +--++++++++....+-++
T Consensus         2 p~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~--~~dliilD~~lp~~~G~el~~~ir~~~~~~pii   79 (118)
T d2b4aa1           2 PFRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLS--TCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVL   79 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGG--SCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence            467899999999999999999999999987766555444443322  3455666665444 3446777887665556566


Q ss_pred             EECc
Q 022418          113 YNNA  116 (297)
Q Consensus       113 i~~a  116 (297)
                      +..+
T Consensus        80 ~lt~   83 (118)
T d2b4aa1          80 ILTT   83 (118)
T ss_dssp             EEES
T ss_pred             EEEC
Confidence            6544

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.24  E-value=4.8  Score=29.82  Aligned_cols=73  Identities=12%  Similarity=0.199  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh------CCCeeEEEecCCCHHHHHHHHHHHHHH
Q 022418           32 LEEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL------GPNATFIACDVTKESDVSDAVDFTISK  105 (297)
Q Consensus        32 ~~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~~~~~  105 (297)
                      ..+++||=.|+..|   .++..+++.+.+|++++-+....+...+..      ..++.+...|+.+.  +    .     
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~----~-----  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--V----K-----  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--C----T-----
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--h----c-----
Confidence            45788998888877   345567778889999999987666554432      24578888898642  1    1     


Q ss_pred             cCCccEEEECccC
Q 022418          106 HNQLDIMYNNAGV  118 (297)
Q Consensus       106 ~g~id~li~~ag~  118 (297)
                      -+..|.++.|...
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            1378999988653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=81.23  E-value=2.4  Score=32.18  Aligned_cols=73  Identities=14%  Similarity=0.157  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh----CCCeeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 022418           34 EKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL----GPNATFIACDVTKESDVSDAVDFTISKHNQL  109 (297)
Q Consensus        34 ~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~i  109 (297)
                      +++||=.|++.|.-   +..++++|.+|++++-+++.++...+..    ..++.++.+|..+.. .         ..+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------ccccc
Confidence            57899999988844   4667889999999999987665543332    356888888887631 0         11468


Q ss_pred             cEEEECccCC
Q 022418          110 DIMYNNAGVA  119 (297)
Q Consensus       110 d~li~~ag~~  119 (297)
                      |+++.+..+.
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            9998877654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.14  E-value=0.67  Score=36.98  Aligned_cols=33  Identities=24%  Similarity=0.198  Sum_probs=29.4

Q ss_pred             EEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCch
Q 022418           36 VALITGAASGIGKATAAKFISNGAKVVIADIQHQ   69 (297)
Q Consensus        36 ~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~   69 (297)
                      .|+|.|| |-.|..+|..|+++|.+|+++.++.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4788888 59999999999999999999999764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.04  E-value=1.2  Score=34.22  Aligned_cols=75  Identities=19%  Similarity=0.250  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHh--CCCeeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 022418           33 EEKVALITGAASGIGKATAAKFISNGAKVVIADIQHQLGQQTAKEL--GPNATFIACDVTKESDVSDAVDFTISKHNQLD  110 (297)
Q Consensus        33 ~~k~vlVtGas~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~~~~~~g~id  110 (297)
                      .|.+||=.|++.|.-......+...| +|++++.+++.++.+.+..  ..++.++..|..++..-..       .+..+|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~-------~~~~vd  127 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG-------IVEKVD  127 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT-------TCCCEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccccc-------ccceEE
Confidence            46899999999885433333333444 8999999998777665443  4578888889887654321       223567


Q ss_pred             EEEEC
Q 022418          111 IMYNN  115 (297)
Q Consensus       111 ~li~~  115 (297)
                      ++++.
T Consensus       128 ~v~~~  132 (209)
T d1nt2a_         128 LIYQD  132 (209)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            76654