Query 022419
Match_columns 297
No_of_seqs 107 out of 119
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 05:11:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4esy_A CBS domain containing m 99.8 1.4E-20 4.8E-25 153.9 8.1 155 35-267 9-163 (170)
2 3k6e_A CBS domain protein; str 99.7 6.1E-18 2.1E-22 139.1 8.7 124 53-270 23-146 (156)
3 3fv6_A YQZB protein; CBS domai 99.7 4.8E-17 1.6E-21 131.3 11.5 141 33-271 6-149 (159)
4 3i8n_A Uncharacterized protein 99.7 8.8E-17 3E-21 125.4 12.2 127 41-266 3-129 (130)
5 3t4n_C Nuclear protein SNF4; C 99.7 8.9E-17 3.1E-21 141.8 13.0 165 40-288 26-196 (323)
6 2uv4_A 5'-AMP-activated protei 99.7 4.3E-17 1.5E-21 130.3 9.7 146 25-266 4-151 (152)
7 2nyc_A Nuclear protein SNF4; b 99.7 3.3E-16 1.1E-20 121.7 13.2 135 42-267 6-142 (144)
8 4gqw_A CBS domain-containing p 99.7 1.5E-16 5.1E-21 124.3 9.6 142 44-269 5-146 (152)
9 3hf7_A Uncharacterized CBS-dom 99.7 3.1E-16 1.1E-20 123.3 11.0 116 55-266 12-127 (130)
10 2qrd_G Protein C1556.08C; AMPK 99.7 7.2E-16 2.5E-20 136.6 14.4 172 34-286 12-189 (334)
11 3lv9_A Putative transporter; C 99.7 9.3E-16 3.2E-20 121.7 13.6 127 41-267 20-146 (148)
12 3sl7_A CBS domain-containing p 99.7 1.6E-16 5.6E-21 128.0 9.0 145 56-269 15-159 (180)
13 3fhm_A Uncharacterized protein 99.7 4.8E-16 1.6E-20 126.1 11.7 119 55-269 35-153 (165)
14 3ctu_A CBS domain protein; str 99.7 1.4E-16 4.7E-21 127.2 8.2 135 41-270 12-146 (156)
15 3lqn_A CBS domain protein; csg 99.7 6.8E-17 2.3E-21 127.8 6.0 137 39-269 10-146 (150)
16 4fry_A Putative signal-transdu 99.7 4E-16 1.4E-20 124.6 10.1 119 55-270 21-139 (157)
17 2pfi_A Chloride channel protei 99.7 1.2E-15 4E-20 121.3 12.7 138 42-270 11-151 (164)
18 1pbj_A Hypothetical protein; s 99.7 1.2E-15 4.1E-20 116.2 12.0 114 55-266 9-122 (125)
19 2v8q_E 5'-AMP-activated protei 99.6 6.9E-16 2.3E-20 136.9 11.9 176 30-285 21-196 (330)
20 3gby_A Uncharacterized protein 99.6 3.9E-16 1.3E-20 121.1 8.7 125 42-267 3-127 (128)
21 3jtf_A Magnesium and cobalt ef 99.6 7.3E-16 2.5E-20 120.4 10.3 123 43-266 4-126 (129)
22 2rc3_A CBS domain; in SITU pro 99.6 4.3E-16 1.5E-20 121.2 8.9 116 55-267 17-132 (135)
23 3nqr_A Magnesium and cobalt ef 99.6 8.1E-16 2.8E-20 119.5 10.4 114 55-266 13-126 (127)
24 3kh5_A Protein MJ1225; AMPK, A 99.6 1.5E-15 5E-20 129.7 12.4 135 54-269 11-145 (280)
25 3kpb_A Uncharacterized protein 99.6 1.4E-15 4.8E-20 115.8 10.9 113 55-267 9-121 (122)
26 2p9m_A Hypothetical protein MJ 99.6 2.4E-15 8.1E-20 116.7 12.4 127 40-266 4-136 (138)
27 3lhh_A CBS domain protein; str 99.6 1.5E-15 5.2E-20 124.8 11.3 128 41-268 39-166 (172)
28 2ef7_A Hypothetical protein ST 99.6 3.1E-15 1.1E-19 115.8 12.3 128 42-270 2-129 (133)
29 2o16_A Acetoin utilization pro 99.6 1.9E-15 6.3E-20 122.4 11.4 134 44-269 5-138 (160)
30 3oco_A Hemolysin-like protein 99.6 1.6E-15 5.4E-20 121.6 10.3 127 41-267 17-144 (153)
31 1y5h_A Hypothetical protein RV 99.6 1.5E-15 5.2E-20 117.5 9.5 116 55-266 16-131 (133)
32 3t4n_C Nuclear protein SNF4; C 99.6 6E-15 2E-19 130.1 14.5 134 43-267 186-321 (323)
33 2yzi_A Hypothetical protein PH 99.6 3.3E-15 1.1E-19 116.3 11.3 129 41-269 4-132 (138)
34 3lfr_A Putative metal ION tran 99.6 7.4E-16 2.5E-20 121.7 7.5 116 55-267 13-128 (136)
35 2j9l_A Chloride channel protei 99.6 2.2E-15 7.5E-20 122.2 10.4 160 39-271 6-170 (185)
36 1o50_A CBS domain-containing p 99.6 8.1E-15 2.8E-19 117.6 13.5 131 54-267 23-154 (157)
37 2rih_A Conserved protein with 99.6 3E-15 1E-19 117.5 10.0 125 44-267 5-129 (141)
38 2emq_A Hypothetical conserved 99.6 1.1E-15 3.6E-20 121.5 7.2 136 40-269 7-142 (157)
39 3k2v_A Putative D-arabinose 5- 99.6 4.2E-15 1.4E-19 118.4 10.2 121 44-262 28-148 (149)
40 1yav_A Hypothetical protein BS 99.6 3.5E-15 1.2E-19 119.6 8.1 136 41-270 11-146 (159)
41 3kxr_A Magnesium transporter, 99.6 1.4E-14 4.9E-19 124.5 11.9 127 43-274 53-182 (205)
42 3oi8_A Uncharacterized protein 99.6 4.6E-15 1.6E-19 119.9 8.2 122 41-262 35-156 (156)
43 3ocm_A Putative membrane prote 99.6 1.8E-14 6.1E-19 120.2 11.6 138 30-268 18-159 (173)
44 1pvm_A Conserved hypothetical 99.6 4.8E-15 1.6E-19 122.5 8.0 125 44-266 9-133 (184)
45 3ddj_A CBS domain-containing p 99.6 1.2E-14 4E-19 126.7 10.2 125 55-269 164-288 (296)
46 3ddj_A CBS domain-containing p 99.5 1.1E-14 3.8E-19 126.9 8.8 138 41-269 17-154 (296)
47 2qrd_G Protein C1556.08C; AMPK 99.5 5.2E-14 1.8E-18 124.6 12.9 136 43-269 181-318 (334)
48 3l2b_A Probable manganase-depe 99.5 7.5E-15 2.6E-19 126.3 7.2 61 200-264 182-242 (245)
49 1vr9_A CBS domain protein/ACT 99.5 3.8E-14 1.3E-18 121.3 10.9 122 46-269 12-133 (213)
50 3kh5_A Protein MJ1225; AMPK, A 99.5 3.9E-14 1.3E-18 120.8 9.8 125 55-265 156-280 (280)
51 2yzq_A Putative uncharacterize 99.5 2.3E-14 7.8E-19 123.1 7.2 150 43-267 125-280 (282)
52 2oux_A Magnesium transporter; 99.5 1.7E-13 5.7E-18 123.1 10.4 125 42-271 135-264 (286)
53 3pc3_A CG1753, isoform A; CBS, 99.4 3.3E-13 1.1E-17 131.1 11.4 130 40-268 380-513 (527)
54 2v8q_E 5'-AMP-activated protei 99.4 5.1E-13 1.7E-17 118.4 11.6 125 55-270 201-327 (330)
55 2yvy_A MGTE, Mg2+ transporter 99.4 7.8E-13 2.7E-17 117.3 11.3 124 42-270 133-261 (278)
56 2d4z_A Chloride channel protei 99.4 2.1E-12 7.3E-17 116.1 11.3 54 208-267 194-247 (250)
57 2yzq_A Putative uncharacterize 99.4 6.1E-13 2.1E-17 114.2 5.8 110 55-266 9-119 (282)
58 3org_A CMCLC; transporter, tra 99.3 9.1E-14 3.1E-18 138.5 -0.3 178 19-266 429-625 (632)
59 2zy9_A Mg2+ transporter MGTE; 99.3 9.1E-12 3.1E-16 120.4 10.2 113 55-269 163-280 (473)
60 3usb_A Inosine-5'-monophosphat 99.2 2.4E-11 8.2E-16 119.3 10.6 114 55-266 121-234 (511)
61 1zfj_A Inosine monophosphate d 99.2 7.1E-11 2.4E-15 113.2 11.6 112 55-266 98-211 (491)
62 4fxs_A Inosine-5'-monophosphat 99.1 2.9E-11 9.8E-16 118.3 4.0 112 55-265 97-208 (496)
63 1vrd_A Inosine-5'-monophosphat 99.1 9.9E-12 3.4E-16 119.6 -0.1 114 55-267 103-216 (494)
64 4avf_A Inosine-5'-monophosphat 99.0 4E-11 1.4E-15 117.0 0.0 111 55-265 96-206 (490)
65 1me8_A Inosine-5'-monophosphat 99.0 4.5E-11 1.5E-15 116.5 0.0 118 56-268 106-223 (503)
66 4af0_A Inosine-5'-monophosphat 98.9 1.7E-10 5.9E-15 115.7 0.0 110 57-265 148-257 (556)
67 1jcn_A Inosine monophosphate d 98.9 4.8E-11 1.6E-15 115.8 -5.1 118 55-266 116-233 (514)
68 2cu0_A Inosine-5'-monophosphat 98.8 6.4E-10 2.2E-14 107.5 -0.2 107 55-265 101-207 (486)
69 3ghd_A A cystathionine beta-sy 98.8 8.4E-09 2.9E-13 76.2 5.7 45 56-109 1-45 (70)
70 4esy_A CBS domain containing m 98.8 3.8E-09 1.3E-13 86.0 3.7 60 201-265 16-75 (170)
71 3lv9_A Putative transporter; C 98.7 2.6E-08 8.9E-13 78.7 7.2 72 194-267 14-85 (148)
72 3lqn_A CBS domain protein; csg 98.7 2.4E-08 8.3E-13 78.6 6.9 81 200-284 12-92 (150)
73 3ctu_A CBS domain protein; str 98.7 4.9E-08 1.7E-12 77.5 7.4 79 201-284 13-91 (156)
74 3ghd_A A cystathionine beta-sy 98.7 6.7E-08 2.3E-12 71.3 7.5 48 217-266 2-49 (70)
75 3k6e_A CBS domain protein; str 98.7 7.3E-08 2.5E-12 78.9 8.4 78 202-284 14-91 (156)
76 1yav_A Hypothetical protein BS 98.6 4.1E-08 1.4E-12 78.4 6.6 82 199-284 10-91 (159)
77 3fio_A A cystathionine beta-sy 98.6 1.2E-07 4E-12 66.4 7.7 50 216-267 1-50 (70)
78 3fhm_A Uncharacterized protein 98.6 1.9E-07 6.3E-12 75.4 9.5 69 198-268 19-87 (165)
79 3kpb_A Uncharacterized protein 98.6 1E-07 3.6E-12 72.1 7.2 60 203-267 1-60 (122)
80 2emq_A Hypothetical conserved 98.6 8.5E-08 2.9E-12 75.8 6.8 83 198-284 6-88 (157)
81 2j9l_A Chloride channel protei 98.6 9E-08 3.1E-12 77.3 7.0 70 198-267 6-78 (185)
82 3l2b_A Probable manganase-depe 98.6 8.8E-08 3E-12 82.2 7.0 63 201-268 5-67 (245)
83 2pfi_A Chloride channel protei 98.5 1.6E-07 5.3E-12 74.3 7.3 64 200-267 10-74 (164)
84 2ef7_A Hypothetical protein ST 98.5 1.8E-07 6.2E-12 71.9 7.5 61 201-267 2-62 (133)
85 3i8n_A Uncharacterized protein 98.5 8.5E-08 2.9E-12 74.4 5.5 66 200-267 3-68 (130)
86 2p9m_A Hypothetical protein MJ 98.5 1.6E-07 5.4E-12 72.5 6.7 63 199-266 4-67 (138)
87 3hf7_A Uncharacterized CBS-dom 98.5 1.9E-07 6.3E-12 73.1 6.9 64 202-267 1-64 (130)
88 3jtf_A Magnesium and cobalt ef 98.5 9E-08 3.1E-12 74.4 5.1 64 200-265 2-65 (129)
89 3nqr_A Magnesium and cobalt ef 98.5 1.1E-07 3.6E-12 73.6 5.4 64 202-267 2-65 (127)
90 2rih_A Conserved protein with 98.5 2.1E-07 7.3E-12 72.7 7.2 61 202-267 4-66 (141)
91 2o16_A Acetoin utilization pro 98.5 1.8E-07 6.3E-12 75.3 6.9 63 201-268 3-65 (160)
92 2rc3_A CBS domain; in SITU pro 98.5 3.9E-07 1.3E-11 70.5 8.1 60 203-265 6-65 (135)
93 2d4z_A Chloride channel protei 98.5 1.7E-07 5.7E-12 84.2 6.8 65 199-267 9-74 (250)
94 3lfr_A Putative metal ION tran 98.5 1.2E-07 4.3E-12 74.4 5.3 63 202-266 2-64 (136)
95 3gby_A Uncharacterized protein 98.5 1.9E-07 6.3E-12 72.1 6.0 61 201-267 3-63 (128)
96 3k2v_A Putative D-arabinose 5- 98.5 2.3E-07 7.7E-12 73.6 6.5 63 202-267 27-89 (149)
97 3oco_A Hemolysin-like protein 98.5 9.3E-08 3.2E-12 76.3 4.2 66 200-267 17-83 (153)
98 3lhh_A CBS domain protein; str 98.5 2.1E-07 7.3E-12 76.2 6.4 70 196-267 35-104 (172)
99 2yzi_A Hypothetical protein PH 98.5 3.1E-07 1E-11 71.1 6.9 62 199-265 3-65 (138)
100 1pbj_A Hypothetical protein; s 98.5 2.5E-07 8.7E-12 70.0 6.3 58 204-267 2-59 (125)
101 3fv6_A YQZB protein; CBS domai 98.4 5E-07 1.7E-11 72.5 7.5 61 200-266 14-74 (159)
102 2nyc_A Nuclear protein SNF4; b 98.4 2.8E-07 9.6E-12 71.1 5.7 64 199-267 4-70 (144)
103 4gqw_A CBS domain-containing p 98.4 1.9E-07 6.4E-12 72.5 4.7 66 201-269 3-68 (152)
104 1y5h_A Hypothetical protein RV 98.4 1.8E-07 6.1E-12 72.0 4.2 64 198-266 3-67 (133)
105 4fry_A Putative signal-transdu 98.4 5.5E-07 1.9E-11 71.5 6.7 65 202-268 6-72 (157)
106 1o50_A CBS domain-containing p 98.4 5E-07 1.7E-11 72.1 6.0 62 198-265 11-73 (157)
107 3oi8_A Uncharacterized protein 98.3 1.4E-07 4.9E-12 75.8 2.5 66 199-266 34-99 (156)
108 1pvm_A Conserved hypothetical 98.3 1.1E-06 3.9E-11 72.2 7.9 61 202-267 8-68 (184)
109 3ocm_A Putative membrane prote 98.3 6.6E-07 2.2E-11 74.4 5.5 68 198-267 31-98 (173)
110 3pc3_A CG1753, isoform A; CBS, 98.2 1.1E-06 3.7E-11 85.5 6.5 65 199-267 380-445 (527)
111 3sl7_A CBS domain-containing p 98.2 9.8E-07 3.4E-11 70.7 5.1 58 203-263 4-61 (180)
112 2uv4_A 5'-AMP-activated protei 98.2 1.1E-06 3.7E-11 69.8 5.3 63 198-267 18-80 (152)
113 3fio_A A cystathionine beta-sy 98.1 3.1E-06 1.1E-10 59.0 5.4 46 56-110 1-46 (70)
114 3org_A CMCLC; transporter, tra 98.0 3.9E-06 1.3E-10 83.8 4.8 64 201-267 451-515 (632)
115 1vr9_A CBS domain protein/ACT 97.8 1.9E-05 6.6E-10 67.2 4.7 60 200-264 10-69 (213)
116 2oux_A Magnesium transporter; 97.7 3.9E-05 1.3E-09 68.7 6.3 61 198-263 132-197 (286)
117 3kxr_A Magnesium transporter, 97.7 5.2E-05 1.8E-09 64.9 6.2 60 198-262 49-111 (205)
118 2yvy_A MGTE, Mg2+ transporter 97.6 0.00012 4E-09 64.8 6.6 60 199-263 131-195 (278)
119 4fxs_A Inosine-5'-monophosphat 96.9 0.0007 2.4E-08 66.3 4.8 53 204-261 90-142 (496)
120 2zy9_A Mg2+ transporter MGTE; 96.9 0.00084 2.9E-08 64.9 5.0 62 196-262 148-214 (473)
121 1zfj_A Inosine monophosphate d 96.8 0.0014 4.6E-08 62.9 5.8 54 205-262 92-146 (491)
122 1me8_A Inosine-5'-monophosphat 96.8 0.00037 1.3E-08 68.0 1.5 49 56-112 172-220 (503)
123 3usb_A Inosine-5'-monophosphat 96.7 0.0023 7.7E-08 62.9 6.5 59 204-262 108-169 (511)
124 4avf_A Inosine-5'-monophosphat 96.4 0.00037 1.3E-08 68.0 -0.7 52 204-261 89-140 (490)
125 1vrd_A Inosine-5'-monophosphat 96.4 0.00046 1.6E-08 66.4 -0.2 53 205-262 97-149 (494)
126 1jcn_A Inosine monophosphate d 96.3 0.00045 1.5E-08 67.0 -1.1 56 204-263 109-166 (514)
127 2cu0_A Inosine-5'-monophosphat 95.5 0.0041 1.4E-07 60.1 1.8 47 56-110 159-205 (486)
128 4af0_A Inosine-5'-monophosphat 94.4 0.0069 2.4E-07 61.2 0.0 44 217-260 148-193 (556)
129 2fwh_A Thiol:disulfide interch 50.3 19 0.00065 27.3 4.4 55 215-270 66-129 (134)
130 2hje_A Autoinducer 2 sensor ki 47.2 8.2 0.00028 35.0 2.0 32 238-269 119-157 (221)
131 2dlx_A UBX domain-containing p 46.1 12 0.00041 30.9 2.7 67 198-268 63-135 (153)
132 2lqo_A Putative glutaredoxin R 43.9 50 0.0017 24.9 5.8 68 202-272 17-87 (92)
133 3c38_A Autoinducer 2 sensor ki 39.7 11 0.00037 35.2 1.6 32 238-269 138-176 (270)
134 1ttz_A Conserved hypothetical 37.6 51 0.0017 24.3 4.8 47 217-269 29-77 (87)
135 1nho_A Probable thioredoxin; b 36.0 29 0.001 23.3 3.1 47 216-267 35-83 (85)
136 3m0f_A Uncharacterized protein 33.5 30 0.001 27.8 3.2 34 233-269 43-77 (213)
137 4glt_A Glutathione S-transfera 33.4 27 0.00091 29.0 3.0 34 233-269 63-97 (225)
138 4gf0_A Glutathione S-transfera 33.0 30 0.001 28.1 3.1 34 233-269 46-80 (215)
139 1zzo_A RV1677; thioredoxin fol 32.9 68 0.0023 23.0 4.8 36 232-268 93-134 (136)
140 3ibh_A GST-II, saccharomyces c 31.0 38 0.0013 27.4 3.5 33 234-269 65-98 (233)
141 3ic4_A Glutaredoxin (GRX-1); s 30.1 19 0.00064 25.5 1.3 35 230-265 57-91 (92)
142 2l5l_A Thioredoxin; structural 29.9 67 0.0023 24.2 4.5 49 217-270 73-127 (136)
143 4exj_A Uncharacterized protein 29.9 36 0.0012 28.2 3.2 33 234-269 47-80 (238)
144 3gr5_A ESCC; secretin, type II 29.8 46 0.0016 27.6 3.8 63 212-274 11-76 (156)
145 4gci_A Glutathione S-transfera 29.2 32 0.0011 28.0 2.7 33 234-269 48-81 (211)
146 4id0_A Glutathione S-transfera 29.2 32 0.0011 27.6 2.6 32 235-269 49-81 (214)
147 3vln_A GSTO-1, glutathione S-t 29.1 41 0.0014 27.7 3.4 33 234-269 65-98 (241)
148 3r2q_A Uncharacterized GST-lik 28.1 39 0.0013 26.7 3.0 32 235-269 43-75 (202)
149 3tou_A Glutathione S-transfera 28.0 38 0.0013 27.8 3.0 33 234-269 44-77 (226)
150 3ir4_A Glutaredoxin 2; glutath 27.6 40 0.0014 27.3 3.0 34 233-269 43-77 (218)
151 3q18_A GSTO-2, glutathione S-t 27.4 37 0.0013 28.0 2.8 33 234-269 65-98 (239)
152 3lyp_A Stringent starvation pr 26.8 40 0.0014 27.2 2.9 32 234-269 50-82 (215)
153 3ubk_A Glutathione transferase 26.3 28 0.00097 29.0 1.9 34 232-269 42-76 (242)
154 3m8n_A Possible glutathione S- 25.9 58 0.002 26.6 3.7 32 234-268 48-80 (225)
155 3uar_A Glutathione S-transfera 25.6 45 0.0016 27.5 3.0 31 235-268 48-79 (227)
156 3m3m_A Glutathione S-transfera 25.1 47 0.0016 26.6 2.9 31 233-266 47-78 (210)
157 3lyk_A Stringent starvation pr 25.1 41 0.0014 27.3 2.6 33 233-269 47-80 (216)
158 3f6d_A Adgstd4-4, glutathione 25.0 52 0.0018 26.5 3.2 35 233-270 44-79 (219)
159 3lxz_A Glutathione S-transfera 24.9 34 0.0012 27.9 2.1 34 232-269 41-75 (229)
160 2cvd_A Glutathione-requiring p 24.0 59 0.002 25.8 3.3 34 232-269 41-75 (198)
161 4g10_A Glutathione S-transfera 23.9 57 0.002 28.0 3.4 31 236-269 52-83 (265)
162 1fov_A Glutaredoxin 3, GRX3; a 23.8 45 0.0015 22.6 2.3 31 231-265 42-73 (82)
163 1wgr_A Growth factor receptor- 23.7 41 0.0014 26.7 2.3 28 51-78 17-44 (100)
164 2dsa_A Glutathione S-transfera 23.7 50 0.0017 26.3 2.9 31 235-268 46-77 (203)
165 1f2e_A Glutathione S-transfera 23.6 66 0.0022 25.6 3.5 31 235-268 46-77 (201)
166 1n2a_A Glutathione S-transfera 23.5 50 0.0017 26.3 2.8 31 235-268 46-77 (201)
167 4hi7_A GI20122; GST, glutathio 22.5 51 0.0017 27.0 2.7 33 233-269 47-80 (228)
168 3qav_A RHO-class glutathione S 21.7 56 0.0019 27.2 2.9 33 233-269 70-103 (243)
169 4hz2_A Glutathione S-transfera 21.4 71 0.0024 26.3 3.4 32 233-267 66-98 (230)
170 1axd_A Glutathione S-transfera 21.3 58 0.002 25.8 2.8 32 234-269 47-79 (209)
171 1k3y_A GSTA1-1, glutathione S- 21.2 66 0.0023 26.1 3.2 30 236-269 49-79 (221)
172 1aw9_A Glutathione S-transfera 20.9 52 0.0018 26.4 2.4 31 235-269 48-79 (216)
173 1c1y_B Proto-onkogene serine/t 20.9 43 0.0015 25.8 1.8 30 48-78 7-37 (77)
174 4ikh_A Glutathione S-transfera 20.8 46 0.0016 27.5 2.1 36 233-269 65-104 (244)
175 2gsq_A Squid GST, glutathione 20.7 52 0.0018 26.2 2.4 34 232-269 41-75 (202)
176 4hz4_A Glutathione-S-transfera 20.5 60 0.0021 26.2 2.8 33 233-269 47-80 (217)
177 3ewl_A Uncharacterized conserv 20.5 1.1E+02 0.0038 22.5 4.1 35 233-268 102-140 (142)
178 4hoj_A REGF protein; GST, glut 20.0 72 0.0025 25.7 3.1 33 233-269 44-77 (210)
No 1
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=1.4e-20 Score=153.86 Aligned_cols=155 Identities=17% Similarity=0.236 Sum_probs=118.0
Q ss_pred HHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHH
Q 022419 35 ETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLET 114 (297)
Q Consensus 35 e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~ 114 (297)
..+...+..+||..+-. .+++.+++++|+.+|+++|.+|++.+.||+|.+ ++++|+|+..||+..+...
T Consensus 9 ~~~~~~l~~~~V~diM~---~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~--------g~lvGiit~~Dll~~~~~~ 77 (170)
T 4esy_A 9 RAIARAIRQVPIRDILT---SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN--------GHLVGIITESDFLRGSIPF 77 (170)
T ss_dssp HHHHHHHHTSBGGGGCC---SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT--------SCEEEEEEGGGGGGGTCCT
T ss_pred HHHHHHHcCCCHHHhcC---CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC--------ccEEEEEEHHHHHHHHhhc
Confidence 34566778999998874 589999999999999999999999999999976 4899999999998743322
Q ss_pred HHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHh
Q 022419 115 AELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVI 194 (297)
Q Consensus 115 ~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L 194 (297)
....... + .....+ ......++
T Consensus 78 ~~~~~~~-----------------------~-----------------------------~~~~~~---~~~~~~~~--- 99 (170)
T 4esy_A 78 WIYEASE-----------------------I-----------------------------LSRAIP---APEVEHLF--- 99 (170)
T ss_dssp THHHHHH-----------------------H-----------------------------HTTTSC---HHHHHHHH---
T ss_pred cccchhh-----------------------h-----------------------------hhhccc---hhhHHhhh---
Confidence 2111000 0 000000 01112222
Q ss_pred hhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 195 LQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 195 ~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+...+.+|+++|+.. +++|.+++++.+++.+|.+++++++||+| +|+++||||+++|++.|...
T Consensus 100 ---~~~~~~~v~~im~~~----~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 100 ---ETGRKLTASAVMTQP----VVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp ---HHHTTCBHHHHCBCC----SCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCCC
T ss_pred ---ccccccchhhhcccC----cccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHhc
Confidence 223678999999876 99999999999999999999999999999 46999999999999987643
No 2
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=6.1e-18 Score=139.09 Aligned_cols=124 Identities=16% Similarity=0.284 Sum_probs=103.7
Q ss_pred CCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccc
Q 022419 53 PGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGV 132 (297)
Q Consensus 53 ~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~ 132 (297)
|..+|+.+..++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||..++++..-.
T Consensus 23 P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~--------~~lvGiit~~Di~~~~~~~~~~--------------- 79 (156)
T 3k6e_A 23 PAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE--------KQFVGTIGLRDIMAYQMEHDLS--------------- 79 (156)
T ss_dssp ETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC---------CBEEEEEEHHHHHHHHHHHTCC---------------
T ss_pred chhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC--------CcEEEEEEecchhhhhhhcccc---------------
Confidence 45799999999999999999999999999999875 3899999999999864432100
Q ss_pred ccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhc
Q 022419 133 GTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSY 212 (297)
Q Consensus 133 g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~ 212 (297)
. +...+++|+++|.+.
T Consensus 80 ----------------------------------------------------------~------~~~~~~~v~~im~~~ 95 (156)
T 3k6e_A 80 ----------------------------------------------------------Q------EIMADTDIVHMTKTD 95 (156)
T ss_dssp ----------------------------------------------------------H------HHHTTSBGGGTCBCS
T ss_pred ----------------------------------------------------------c------ccccccCHHHhhcCC
Confidence 0 112467899999876
Q ss_pred cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 213 RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 213 rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
+++|.+++++.+++.+|.++++ +||||. +|+++||||+++|++.+.+..+.
T Consensus 96 ----~~~v~~~~~l~~~~~~m~~~~~--lpVVd~-~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 96 ----VAVVSPDFTITEVLHKLVDESF--LPVVDA-EGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp ----CCCBCTTCCHHHHHHHTTTSSE--EEEECT-TSBEEEEEEHHHHHHHHHHHSCC
T ss_pred ----ceecccccHHHHHHHHHHHcCC--eEEEec-CCEEEEEEEHHHHHHHHHHHhcc
Confidence 8999999999999999999875 999997 57999999999999999876654
No 3
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.71 E-value=4.8e-17 Score=131.25 Aligned_cols=141 Identities=13% Similarity=0.213 Sum_probs=118.0
Q ss_pred HHHHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHH
Q 022419 33 LQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVL 112 (297)
Q Consensus 33 ~~e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvL 112 (297)
.+..+...+..++|..+-.. + +.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..+++
T Consensus 6 ~~~~l~~~l~~~~v~~im~~---~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~ 73 (159)
T 3fv6_A 6 GTQLLADKLKKLQVKDFQSI---P-VVIHENVSVYDAICTMFLEDVGTLFVVDRD--------AVLVGVLSRKDLLRASI 73 (159)
T ss_dssp -CHHHHHHHTTCBGGGSCBC---C-CEEETTSBHHHHHHHHHHHTCSEEEEECTT--------SCEEEEEEHHHHHHHHT
T ss_pred hHHHHHHHHhhCCHHHHcCC---C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC--------CcEEEEEeHHHHHHHhh
Confidence 34668888999999998752 3 599999999999999999999999999965 38999999999998421
Q ss_pred HHHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHH
Q 022419 113 ETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYK 192 (297)
Q Consensus 113 e~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~ 192 (297)
.
T Consensus 74 ~------------------------------------------------------------------------------- 74 (159)
T 3fv6_A 74 G------------------------------------------------------------------------------- 74 (159)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HhhhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCC---CeeEEeehHHHHHHHhhccC
Q 022419 193 VILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTP---DIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 193 ~L~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~---~i~niITQSaVI~~L~~~~g 269 (297)
.....+++|+++|.. +.+++.|.+++++.+++.+|.+++++++||+|.+ | +++|+||+++|++.+.+...
T Consensus 75 ----~~~~~~~~v~~~m~~--~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 75 ----QQELTSVPVHIIMTR--MPNITVCRREDYVMDIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp ----CSCTTTCBGGGTSEE--TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred ----cCcccCcCHHHHHcC--CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHHHHHhh
Confidence 012346789999975 2348899999999999999999999999999964 5 89999999999999998776
Q ss_pred Cc
Q 022419 270 RD 271 (297)
Q Consensus 270 ~d 271 (297)
..
T Consensus 148 ~~ 149 (159)
T 3fv6_A 148 NE 149 (159)
T ss_dssp TC
T ss_pred cc
Confidence 53
No 4
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.71 E-value=8.8e-17 Score=125.44 Aligned_cols=127 Identities=13% Similarity=0.171 Sum_probs=104.1
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|..++|..+-.. ..+++.+.+++|+.+|+++|.++++...||+|.+. ++++|+|+..||..++.
T Consensus 3 l~~~~v~~iM~~-~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~-------~~~~Givt~~dl~~~~~-------- 66 (130)
T 3i8n_A 3 AQDVPVTQVMTP-RPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQK-------DNIIGFVHRLELFKMQQ-------- 66 (130)
T ss_dssp ----CCTTTSCC-BCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSST-------TCEEEECCHHHHHHHHH--------
T ss_pred cCcCCHhhCCCc-HHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC-------CcEEEEEEHHHHHHHHh--------
Confidence 567778777653 35788999999999999999999999999999752 38999999999988310
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
+..
T Consensus 67 -----------------------------------------------------------------------------~~~ 69 (130)
T 3i8n_A 67 -----------------------------------------------------------------------------SGS 69 (130)
T ss_dssp -----------------------------------------------------------------------------TTT
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 011
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.+++|+++|+ |++.|.+++++.+++.+|.+++++++||+|. +|+++||||+++|++.|.+
T Consensus 70 ~~~~v~~~m~-----~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 70 GQKQLGAVMR-----PIQVVLNNTALPKVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp TTSBHHHHSE-----ECCEEETTSCHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred CcCCHHHHhc-----CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHHHcC
Confidence 3567999994 4689999999999999999999999999996 4699999999999998864
No 5
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.70 E-value=8.9e-17 Score=141.77 Aligned_cols=165 Identities=13% Similarity=0.180 Sum_probs=121.7
Q ss_pred HhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHH
Q 022419 40 AFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAA 119 (297)
Q Consensus 40 ~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~ 119 (297)
++....+..+-. ++.+++.++.++|+.+|+++|.+||+.++||+|.+. ++|+|+++..||+..++.......
T Consensus 26 ~l~~~~~~d~m~-~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~-------~~lvGilt~~Dl~~~l~~~~~~~~ 97 (323)
T 3t4n_C 26 FLNSKTSYDVLP-VSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKT-------SRFAGLLTTTDFINVIQYYFSNPD 97 (323)
T ss_dssp HHHHSBHHHHSC-SEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTT-------TEEEEEECHHHHHHHHHHHHHCGG
T ss_pred HHHhCchHhhCC-CCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCC-------CeEEEEEEHHHHHHHHHHHHcCcc
Confidence 334444444443 367999999999999999999999999999999763 389999999999986554322110
Q ss_pred hhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCC
Q 022419 120 AAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEP 199 (297)
Q Consensus 120 ~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~ 199 (297)
. ++.+ +.
T Consensus 98 ~----------------------------------------------------------------------~~~l---~~ 104 (323)
T 3t4n_C 98 K----------------------------------------------------------------------FELV---DK 104 (323)
T ss_dssp G----------------------------------------------------------------------GGGG---GG
T ss_pred h----------------------------------------------------------------------hHHH---HH
Confidence 0 0011 22
Q ss_pred CCccchhhHhhhccC--CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCC----CeeEEeehHHHHHHHhhccCCchh
Q 022419 200 FKSTTVRSIIKSYRW--APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTP----DIKNYITQSAVVQGLEGCKGRDWF 273 (297)
Q Consensus 200 ~k~tkV~dI~~s~rw--aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~----~i~niITQSaVI~~L~~~~g~dwf 273 (297)
+....++++++...+ .+++.+.+++++.+++.+|.+++++++||+|.++. ++.|+||+.++++.+..+...
T Consensus 105 ~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~--- 181 (323)
T 3t4n_C 105 LQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE--- 181 (323)
T ss_dssp CBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG---
T ss_pred HHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc---
Confidence 334556777654433 34899999999999999999999999999997532 299999999999999866533
Q ss_pred hhhccccccccCCCc
Q 022419 274 DIIASQPISDLGLPF 288 (297)
Q Consensus 274 ~~i~~K~lselgLp~ 288 (297)
..+..++++++++++
T Consensus 182 ~~~~~~~v~~~~~~m 196 (323)
T 3t4n_C 182 THFLKIPIGDLNIIT 196 (323)
T ss_dssp GGGCCSBGGGTTCSB
T ss_pred hhhhhCcHHHcCCCC
Confidence 445577888887654
No 6
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.70 E-value=4.3e-17 Score=130.31 Aligned_cols=146 Identities=12% Similarity=0.183 Sum_probs=114.2
Q ss_pred hhccCCCCHHHHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEeh
Q 022419 25 SRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDY 104 (297)
Q Consensus 25 ~~~~~~~~~~e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~ 104 (297)
.....+......++..+..++|..+ .+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~v~~~-----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--------~~~vGivt~ 70 (152)
T 2uv4_A 4 HHHHHEFPKPEFMSKSLEELQIGTY-----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK--------GRVVDIYSK 70 (152)
T ss_dssp ----CCSSCHHHHTSBHHHHTCSBC-----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT--------SBEEEEEEH
T ss_pred ccccccccchHHHHhhHHHccCCcc-----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC--------CcEEEEEeH
Confidence 3334455667778888889999887 467889999999999999999999999999975 389999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhh
Q 022419 105 SAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAAD 184 (297)
Q Consensus 105 ~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~ 184 (297)
.||..++.+. .
T Consensus 71 ~dl~~~~~~~-----------------------------------------------------------~---------- 81 (152)
T 2uv4_A 71 FDVINLAAEK-----------------------------------------------------------T---------- 81 (152)
T ss_dssp HHHHHHHHCS-----------------------------------------------------------S----------
T ss_pred HHHHHHhcch-----------------------------------------------------------h----------
Confidence 9998741100 0
Q ss_pred hhhhhHHHHhhhcCCCCccchhhHhhhccC--CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 185 RLHEDFYKVILQEEPFKSTTVRSIIKSYRW--APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 185 ~~~~df~~~L~~~e~~k~tkV~dI~~s~rw--aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
+ ...+++|+++|..... .|++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++
T Consensus 82 ------~-------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~ 147 (152)
T 2uv4_A 82 ------Y-------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQ 147 (152)
T ss_dssp ------C-------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHH
T ss_pred ------h-------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHH
Confidence 0 0124568888852111 34889999999999999999999999999996 469999999999999
Q ss_pred HHhh
Q 022419 263 GLEG 266 (297)
Q Consensus 263 ~L~~ 266 (297)
.|.+
T Consensus 148 ~l~~ 151 (152)
T 2uv4_A 148 ALVL 151 (152)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 8754
No 7
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=3.3e-16 Score=121.70 Aligned_cols=135 Identities=11% Similarity=0.176 Sum_probs=105.3
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhh
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAA 121 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~ 121 (297)
-..++..+.-....+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++.+. .
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~~~---~--- 71 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN--------GYLINVYEAYDVLGLIKGG---I--- 71 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEEHHHHHHHHHTC-------
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCC--------CcEEEEEcHHHHHHHhccc---c---
Confidence 3456666443334688999999999999999999999999999975 3899999999998842110 0
Q ss_pred hccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCC
Q 022419 122 FSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFK 201 (297)
Q Consensus 122 ~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k 201 (297)
+ ...
T Consensus 72 ---------------------------------------------------------------------~-------~~~ 75 (144)
T 2nyc_A 72 ---------------------------------------------------------------------Y-------NDL 75 (144)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ---------------------------------------------------------------------c-------ccC
Confidence 0 123
Q ss_pred ccchhhHhhhc--cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSY--RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~--rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+++|+++|... .+.|++.|.+++++.+++.+|.+++++++||+|. +|+++|+||++++++.|.+.
T Consensus 76 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 76 SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp CSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHHC
T ss_pred CccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHHHHhc
Confidence 56789988652 1135889999999999999999999999999996 47999999999999998653
No 8
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.68 E-value=1.5e-16 Score=124.28 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=105.2
Q ss_pred CccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhc
Q 022419 44 IPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 123 (297)
Q Consensus 44 IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~ 123 (297)
++|..+-.. ..+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++......
T Consensus 5 ~~v~~im~~-~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~G~vt~~dl~~~~~~~~~~------ 69 (152)
T 4gqw_A 5 YTVGEFMTK-KEDLHVVKPTTTVDEALELLVENRITGFPVIDED--------WKLVGLVSDYDLLALDSGDSTW------ 69 (152)
T ss_dssp SBGGGTSEE-STTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT--------CBEEEEEEHHHHTTCC----CC------
T ss_pred EEhhhccCC-CCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC--------CeEEEEEEHHHHHHhhcccCcc------
Confidence 455555432 3368899999999999999999999999999975 3899999999998742111000
Q ss_pred cccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCcc
Q 022419 124 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 203 (297)
Q Consensus 124 ~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~t 203 (297)
..|.+.-.......++
T Consensus 70 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 70 ----------------------------------------------------------------KTFNAVQKLLSKTNGK 85 (152)
T ss_dssp ----------------------------------------------------------------HHHHHHHTC-----CC
T ss_pred ----------------------------------------------------------------cchHHHHHHHHHhccc
Confidence 0000000000223568
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+|+++|... ++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.+.+...
T Consensus 86 ~v~~~m~~~----~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 86 LVGDLMTPA----PLVVEEKTNLEDAAKILLETKYRRLPVVDS-DGKLVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp BHHHHSEES----CCCEESSSBHHHHHHHHHHSSCCEEEEECT-TSBEEEEEEHHHHHHHHHC---
T ss_pred cHHHhcCCC----ceEECCCCcHHHHHHHHHHCCCCEEEEECC-CCcEEEEEEHHHHHHHHHhccc
Confidence 999999874 788999999999999999999999999996 4699999999999999987654
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.67 E-value=3.1e-16 Score=123.30 Aligned_cols=116 Identities=9% Similarity=0.148 Sum_probs=98.3
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++.+.||+|.+. ++++|+|+..||..++.+
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~-------~~lvGivt~~dl~~~~~~--------------------- 63 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSL-------DDAISMLRVREAYRLMTE--------------------- 63 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSG-------GGEEEEEEHHHHHHHHTS---------------------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCC-------CcEEEEEEHHHHHHHHhc---------------------
Confidence 4689999999999999999999999999997642 489999999999884100
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
...+..++|+++|+
T Consensus 64 --------------------------------------------------------------~~~~~~~~v~~~m~---- 77 (130)
T 3hf7_A 64 --------------------------------------------------------------KKEFTKEIMLRAAD---- 77 (130)
T ss_dssp --------------------------------------------------------------SSCCCHHHHHHHSB----
T ss_pred --------------------------------------------------------------cCccchhhHHHhcc----
Confidence 01234567899983
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
|++.|.+++++.+++.+|.+++++++||+|. +|+++||||+.++++.|.+
T Consensus 78 -~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 78 -EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp -CCCEEETTCBHHHHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHHHHC
T ss_pred -CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHHHhC
Confidence 4688999999999999999999999999986 4699999999999999875
No 10
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.67 E-value=7.2e-16 Score=136.57 Aligned_cols=172 Identities=17% Similarity=0.233 Sum_probs=124.0
Q ss_pred HHHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHH
Q 022419 34 QETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLE 113 (297)
Q Consensus 34 ~e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe 113 (297)
.+.+..+++...|..+-. |..+++.++.++|+.+|+++|.++++.+.||+|.+. ++|+|||+..||+.+++.
T Consensus 12 ~~~~~~~l~~~~v~dim~-~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~-------~~~vGiv~~~Dl~~~~~~ 83 (334)
T 2qrd_G 12 LKEIQAFIRSRTSYDVLP-TSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEA-------NKFAGLLTMADFVNVIKY 83 (334)
T ss_dssp HHHHHHHHHHSBGGGGSC-SEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTT-------TEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHhcCchhhhCC-CCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCC-------CeEEEEEEHHHHHHHHHH
Confidence 345667788899999875 367899999999999999999999999999999752 489999999999987654
Q ss_pred HHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHH
Q 022419 114 TAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKV 193 (297)
Q Consensus 114 ~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~ 193 (297)
..+.... | +.++.
T Consensus 84 ~~~~~~~-----------------------------~--------------------------------------~~~~~ 96 (334)
T 2qrd_G 84 YYQSSSF-----------------------------P--------------------------------------EAIAE 96 (334)
T ss_dssp HHHHCSC-----------------------------G--------------------------------------GGGGG
T ss_pred HhhccCC-----------------------------c--------------------------------------cHHHH
Confidence 3221100 0 00000
Q ss_pred hhhcCCCCccchhhHhhhccCCCc--eEecCCCCHHHHHHHHhhcCCceeEEEcCCCCC----eeEEeehHHHHHHHhhc
Q 022419 194 ILQEEPFKSTTVRSIIKSYRWAPF--LPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPD----IKNYITQSAVVQGLEGC 267 (297)
Q Consensus 194 L~~~e~~k~tkV~dI~~s~rwaPF--lpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~----i~niITQSaVI~~L~~~ 267 (297)
+ +.+.-..++++.+..-..|+ +.|.++.++.+++.+|.+++.+++||+|..+++ +.|+||+.++++.+...
T Consensus 97 ~---~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~ 173 (334)
T 2qrd_G 97 I---DKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMN 173 (334)
T ss_dssp G---GSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHH
T ss_pred H---hhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhh
Confidence 0 11111223333333334456 899999999999999999999999999975445 99999999999998764
Q ss_pred cCCchhhhhccccccccCC
Q 022419 268 KGRDWFDIIASQPISDLGL 286 (297)
Q Consensus 268 ~g~dwf~~i~~K~lselgL 286 (297)
... . .+..+++++++.
T Consensus 174 ~~~--~-~~~~~~v~~l~~ 189 (334)
T 2qrd_G 174 CKE--T-AMLRVPLNQMTI 189 (334)
T ss_dssp CGG--G-GGCCCBGGGSSC
T ss_pred ccc--h-hhhhCcHHHhCC
Confidence 322 1 234567777643
No 11
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.67 E-value=9.3e-16 Score=121.70 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=107.1
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|..++|..+-.. ..+++.+.+++|+.+|+++|.++++...||+|.+. ++++|+|+..||..++.+.
T Consensus 20 l~~~~v~diM~~-~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~-------~~lvGivt~~dl~~~~~~~------ 85 (148)
T 3lv9_A 20 FEEKKIREIMVP-RTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNK-------DDILGFVHIRDLYNQKINE------ 85 (148)
T ss_dssp GGTCBGGGTSEE-TTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSST-------TSEEEEEEHHHHHHHHHHH------
T ss_pred cCCCCHHHcccc-HHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC-------CcEEEEEEHHHHHHHHhcC------
Confidence 567888887642 34789999999999999999999999999998752 2899999999998841100
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
.
T Consensus 86 -----------------------------------------------------------------------------~-- 86 (148)
T 3lv9_A 86 -----------------------------------------------------------------------------N-- 86 (148)
T ss_dssp -----------------------------------------------------------------------------S--
T ss_pred -----------------------------------------------------------------------------C--
Confidence 1
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+++|+++| . |++.|.+++++.+++.+|.+++++++||+|. +|+++||||++++++.|.+.
T Consensus 87 -~~~v~~~m-~----~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 87 -KIELEEIL-R----DIIYISENLTIDKALERIRKEKLQLAIVVDE-YGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp -CCCGGGTC-B----CCEEEETTSBHHHHHHHHHHHTCSEEEEECT-TSSEEEEEEHHHHHHHHHHT
T ss_pred -CccHHHhc-C----CCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhCc
Confidence 56788888 3 4789999999999999999999999999996 46999999999999998753
No 12
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.67 E-value=1.6e-16 Score=128.01 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=103.7
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhccccccccccccc
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTG 135 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~ 135 (297)
+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||+.+..........
T Consensus 15 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~--------~~~~Givt~~dl~~~~~~~~~~~~~--------------- 71 (180)
T 3sl7_A 15 NLHVVKPSTSVDDALELLVEKKVTGLPVIDDN--------WTLVGVVSDYDLLALDSISGRSQND--------------- 71 (180)
T ss_dssp GCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEEHHHHTCC-------------------------
T ss_pred CceeeCCCCcHHHHHHHHHHcCCCeEEEECCC--------CeEEEEEEHHHHHhhhhhccccCCc---------------
Confidence 67889999999999999999999999999975 4899999999998642211100000
Q ss_pred cccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccCC
Q 022419 136 TVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWA 215 (297)
Q Consensus 136 a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rwa 215 (297)
..+. | + .+. .-. ...++...+ ....+++|+++|+..
T Consensus 72 -------~~~~---~---------------------~--~~~----~~~-~~~~~~~~~---~~~~~~~v~~~m~~~--- 107 (180)
T 3sl7_A 72 -------TNLF---P---------------------D--VDS----TWK-TFNELQKLI---SKTYGKVVGDLMTPS--- 107 (180)
T ss_dssp ----------------------------------------------CCC-SHHHHHHHH---HTTTTCBHHHHSEES---
T ss_pred -------cccc---c---------------------c--ccc----hhh-hhHHHHHHH---hccccccHHHHhCCC---
Confidence 0000 0 0 000 000 001111111 234578999999865
Q ss_pred CceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 216 PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 216 PFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
++.|.+++++.+++.+|.+++++++||+|. +|+++||||+++|++.+.+...
T Consensus 108 -~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 108 -PLVVRDSTNLEDAARLLLETKFRRLPVVDA-DGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp -CCCEETTSBHHHHHHHHTTSTTCEEEEECT-TCBEEEEEEHHHHHHHHHHHHH
T ss_pred -ceEeCCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHHHHhh
Confidence 788999999999999999999999999996 4699999999999999987654
No 13
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=4.8e-16 Score=126.06 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=101.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||+.++....
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~~~~------------------- 87 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD--------GVVLGIFTERDLVKAVAGQG------------------- 87 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT--------SCEEEEEEHHHHHHHHHHHG-------------------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC--------CeEEEEEEHHHHHHHHHhcC-------------------
Confidence 468999999999999999999999999999965 48999999999998643221
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
....+++|+++|...
T Consensus 88 ---------------------------------------------------------------~~~~~~~v~~~m~~~-- 102 (165)
T 3fhm_A 88 ---------------------------------------------------------------AASLQQSVSVAMTKN-- 102 (165)
T ss_dssp ---------------------------------------------------------------GGGGTSBGGGTSBSS--
T ss_pred ---------------------------------------------------------------CccccCCHHHHhcCC--
Confidence 011357799999854
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
++.|.+++++.+++.+|.+++++++||+|. |+++|+||+++|++.+.+...
T Consensus 103 --~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~~~~~ 153 (165)
T 3fhm_A 103 --VVRCQHNSTTDQLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARIGEIE 153 (165)
T ss_dssp --CCCBCTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTTCC--
T ss_pred --CeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHHHH
Confidence 889999999999999999999999999997 699999999999999877553
No 14
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.66 E-value=1.4e-16 Score=127.17 Aligned_cols=135 Identities=16% Similarity=0.256 Sum_probs=108.1
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|-..+|..+-. |..+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++......
T Consensus 12 l~~~~v~dim~-p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~--------~~~~Giit~~dl~~~~~~~~~~--- 79 (156)
T 3ctu_A 12 FLLGQEETFLT-PAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE--------KQFVGTIGLRDIMAYQMEHDLS--- 79 (156)
T ss_dssp HHHTTGGGGEE-EGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC---------CBEEEEEEHHHHHHHHHHHTCC---
T ss_pred HHHHHHHHHcC-cccCceEECCCCCHHHHHHHHHHCCCceEeEECCC--------CEEEEEEcHHHHHHHHHhcccc---
Confidence 33455655544 24678999999999999999999999999999975 3899999999999964331000
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
. +.+
T Consensus 80 ----------------------------------------------------------------------~------~~~ 83 (156)
T 3ctu_A 80 ----------------------------------------------------------------------Q------EIM 83 (156)
T ss_dssp ----------------------------------------------------------------------H------HHH
T ss_pred ----------------------------------------------------------------------c------ccc
Confidence 0 112
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
.+++|+++|.. +++.|.+++++.+++.+|.+++ ++||||. +|+++|+||++++++.+.+....
T Consensus 84 ~~~~v~~~m~~----~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 84 ADTDIVHMTKT----DVAVVSPDFTITEVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp TTSBGGGGCBC----SCCCBCSSCCHHHHHHHTTTSS--EEEEECT-TSBEEEEEETTHHHHHHHHHSCC
T ss_pred ccCcHHHhccC----CceeeCCCCcHHHHHHHHHHcC--eEEEEcC-CCeEEEEEEHHHHHHHHHHHHHh
Confidence 46789999975 4889999999999999999987 7999996 47999999999999999887654
No 15
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.66 E-value=6.8e-17 Score=127.83 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=110.2
Q ss_pred HHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHH
Q 022419 39 AAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELA 118 (297)
Q Consensus 39 ~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a 118 (297)
..|..++|..+-.. ..+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..+++...
T Consensus 10 ~~l~~~~v~~im~~-~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~--------~~~~Givt~~dl~~~~~~~~--- 77 (150)
T 3lqn_A 10 DEFQQIFVKDLMIS-SEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM--------YKLHGLISTAMILDGILGLE--- 77 (150)
T ss_dssp HHHHHCBHHHHSEE-GGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEEHHHHHHHTBCSS---
T ss_pred HhhhcCChhhcccC-CCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC--------CCEEEEEEHHHHHHHHHhhc---
Confidence 34667788777653 3468999999999999999999999999999975 38999999999998521000
Q ss_pred HhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcC
Q 022419 119 AAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEE 198 (297)
Q Consensus 119 ~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e 198 (297)
+. + + +
T Consensus 78 -------------------------------------------------------~~-------------~-~------~ 82 (150)
T 3lqn_A 78 -------------------------------------------------------RI-------------E-F------E 82 (150)
T ss_dssp -------------------------------------------------------SB-------------C-G------G
T ss_pred -------------------------------------------------------cc-------------c-h------h
Confidence 00 0 0 2
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
...+++|+++|... ++.|.+++++.+++.+|.++++ +||||. +|+++|+||+++|++.+.+...
T Consensus 83 ~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 83 RLEEMKVEQVMKQD----IPVLKLEDSFAKALEMTIDHPF--ICAVNE-DGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp GGGGCBGGGTCBSS----CCEEETTCBHHHHHHHHHHCSE--EEEECT-TCBEEEEEEHHHHHHHHHHHC-
T ss_pred HHhcCCHHHHhcCC----CceeCCCCCHHHHHHHHHhCCE--EEEECC-CCcEEEEEEHHHHHHHHHHHhH
Confidence 23567899999854 8999999999999999999987 999996 4699999999999999987653
No 16
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.66 E-value=4e-16 Score=124.56 Aligned_cols=119 Identities=19% Similarity=0.236 Sum_probs=101.9
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++...||.|. ++++|+|+..||+.++...
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~---------~~~~Givt~~dl~~~~~~~-------------------- 71 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVDG---------DDIAGIVTERDYARKVVLQ-------------------- 71 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEESS---------SSEEEEEEHHHHHHHSGGG--------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEeeC---------CEEEEEEEHHHHHHHHHhc--------------------
Confidence 67899999999999999999999999999653 3899999999999841100
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
.....+++|+++|...
T Consensus 72 --------------------------------------------------------------~~~~~~~~v~~~m~~~-- 87 (157)
T 4fry_A 72 --------------------------------------------------------------ERSSKATRVEEIMTAK-- 87 (157)
T ss_dssp --------------------------------------------------------------TCCSSSCBHHHHSBSS--
T ss_pred --------------------------------------------------------------cCCccccCHHHHcCCC--
Confidence 0123578899999864
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
++.|.+++++.+++.+|.+++++++||+| +|+++|+||++++++.+.+....
T Consensus 88 --~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 88 --VRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp --CCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCCC
T ss_pred --CcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999 47999999999999999876543
No 17
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.66 E-value=1.2e-15 Score=121.30 Aligned_cols=138 Identities=12% Similarity=0.219 Sum_probs=107.5
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecC-CCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIP-DAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~-da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
..++|..+-. .+++.+..++|+.+|+++|.++++.+.||+|. +. ++++|+|+..||..++.+... .
T Consensus 11 ~~~~v~dim~---~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~-------~~~~Givt~~dl~~~~~~~~~-~-- 77 (164)
T 2pfi_A 11 HHVRVEHFMN---HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTES-------QILVGIVQRAQLVQALQAEPP-S-- 77 (164)
T ss_dssp CSCBHHHHCB---CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTT-------CBEEEEEEHHHHHHHHHC-------
T ss_pred cCCCHHHHcC---CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCC-------CEEEEEEEHHHHHHHHHhhcc-c--
Confidence 3456665553 36788999999999999999999999999996 22 389999999999875221100 0
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
. ...
T Consensus 78 ----------------------------------------------------------------------~------~~~ 81 (164)
T 2pfi_A 78 ----------------------------------------------------------------------R------APG 81 (164)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ----------------------------------------------------------------------c------CCc
Confidence 0 012
Q ss_pred CccchhhHhhhcc-CCC-ceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 201 KSTTVRSIIKSYR-WAP-FLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 201 k~tkV~dI~~s~r-waP-FlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
..++|+++|.... ..| ++.|.+++++.+++.+|.+++++++||+| +|+++|+||+++|++.+.+..+.
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~~~~~~ 151 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAISNLTNP 151 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHHHHHSC
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHHhhhCC
Confidence 4567888887542 223 78899999999999999999999999999 47999999999999999886654
No 18
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=1.2e-15 Score=116.24 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=98.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++...||+| + ++++|+|+..||..++.+.
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~--------~~~~G~it~~dl~~~~~~~-------------------- 59 (125)
T 1pbj_A 9 TDVDTIDITASLEDVLRNYVENAKGSSVVVK-E--------GVRVGIVTTWDVLEAIAEG-------------------- 59 (125)
T ss_dssp CSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T--------TEEEEEEEHHHHHHHHHHT--------------------
T ss_pred CCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C--------CeeEEEEeHHHHHHHHhcC--------------------
Confidence 3678999999999999999999999999999 4 3899999999998742110
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
..+.+++|+++|...
T Consensus 60 ---------------------------------------------------------------~~~~~~~v~~~m~~~-- 74 (125)
T 1pbj_A 60 ---------------------------------------------------------------DDLAEVKVWEVMERD-- 74 (125)
T ss_dssp ---------------------------------------------------------------CCTTTSBHHHHCBCG--
T ss_pred ---------------------------------------------------------------CcccccCHHHHcCCC--
Confidence 113467899999864
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
+..+.+++++.+++.+|.+++++++||+|. |++.|+||++++++.|.+
T Consensus 75 --~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 75 --LVTISPRATIKEAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKMA 122 (125)
T ss_dssp --GGEECTTSCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC-
T ss_pred --CeEECCCCCHHHHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 899999999999999999999999999996 699999999999998865
No 19
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.65 E-value=6.9e-16 Score=136.85 Aligned_cols=176 Identities=13% Similarity=0.156 Sum_probs=129.9
Q ss_pred CCCHHHHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHH
Q 022419 30 PHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIIL 109 (297)
Q Consensus 30 ~~~~~e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~ 109 (297)
+..-.+.++.+|...+|..+.. |..+++.++.++|+.+|+++|.++++.+.||+|.+. ++++|||+..||+.
T Consensus 21 ~~~~~~~~~~~l~~~~v~dim~-p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~-------~~~vGivt~~Dll~ 92 (330)
T 2v8q_E 21 PESNSSVYTTFMKSHRCYDLIP-TSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKK-------QSFVGMLTITDFIN 92 (330)
T ss_dssp --CCSCHHHHHHHHSBGGGGSC-SEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTT-------TEEEEEEEHHHHHH
T ss_pred cchhhHHHHHHHHcCcHhhhcc-CCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCC-------CeEEEEEEHHHHHH
Confidence 3344566889999999999975 367999999999999999999999999999999762 38999999999998
Q ss_pred HHHHHHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhh
Q 022419 110 WVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHED 189 (297)
Q Consensus 110 wvLe~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~d 189 (297)
.+....+.... . . .. +. .....+
T Consensus 93 ~l~~~~~~~~~------~------~---~~-----l~-------------------------------------~~~~~~ 115 (330)
T 2v8q_E 93 ILHRYYKSALV------Q------I---YE-----LE-------------------------------------EHKIET 115 (330)
T ss_dssp HHHHHHHHHTT------T------C---CC-----GG-------------------------------------GCBHHH
T ss_pred HHHHHHhcccc------c------h---hH-----Hh-------------------------------------hccHHH
Confidence 65443221100 0 0 00 00 000111
Q ss_pred HHHHhhhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 190 FYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 190 f~~~L~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+. .+++++|.. |++.|.++.++.+++.+|.+++++++||+|.++|+++|+||+.++++.+....+
T Consensus 116 ~~-----------~~~~~im~~----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~ 180 (330)
T 2v8q_E 116 WR-----------EVYLQDSFK----PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFIT 180 (330)
T ss_dssp HH-----------HHHSSSSCC----CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSC
T ss_pred HH-----------HHHhhcccC----CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhh
Confidence 11 124455543 589999999999999999999999999999745799999999999999987765
Q ss_pred CchhhhhccccccccC
Q 022419 270 RDWFDIIASQPISDLG 285 (297)
Q Consensus 270 ~dwf~~i~~K~lselg 285 (297)
...++.+..++++++.
T Consensus 181 ~~~~~~~~~~~v~~~~ 196 (330)
T 2v8q_E 181 EFPKPEFMSKSLEELQ 196 (330)
T ss_dssp SSSCCGGGGSBHHHHT
T ss_pred ccCchhhhcCCHHHhc
Confidence 4445555667777764
No 20
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.65 E-value=3.9e-16 Score=121.10 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=105.1
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhh
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAA 121 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~ 121 (297)
++++|+.+-. .++..+.+++|+.+|+++|.++++...||+|.+ +++|+|+..||..+
T Consensus 3 ~s~~v~~~m~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---------~~~Givt~~dl~~~----------- 59 (128)
T 3gby_A 3 ASVTFSYLAE---TDYPVFTLGGSTADAARRLAASGCACAPVLDGE---------RYLGMVHLSRLLEG----------- 59 (128)
T ss_dssp TTCBGGGGCB---CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETT---------EEEEEEEHHHHHTT-----------
T ss_pred cceEHHHhhc---CCcceECCCCCHHHHHHHHHHCCCcEEEEEECC---------EEEEEEEHHHHHHH-----------
Confidence 5677777765 357889999999999999999999999999973 89999999999862
Q ss_pred hccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCC
Q 022419 122 FSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFK 201 (297)
Q Consensus 122 ~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k 201 (297)
+.. ....
T Consensus 60 -----------------------~~~--------------------------------------------------~~~~ 66 (128)
T 3gby_A 60 -----------------------RKG--------------------------------------------------WPTV 66 (128)
T ss_dssp -----------------------CSS--------------------------------------------------SCCT
T ss_pred -----------------------Hhh--------------------------------------------------CCcc
Confidence 100 0012
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+++|+++|... +..+.+++++.+++.+|.+++++++||+|. +|+++|+||++++++.|.+.
T Consensus 67 ~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 67 KEKLGEELLET----VRSYRPGEQLFDNLISVAAAKCSVVPLADE-DGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp TCBCCGGGCBC----CCCBCTTSBGGGSHHHHHHCSSSEEEEECT-TCBEEEEEEHHHHHHHHHTT
T ss_pred cCcHHHHccCC----CcEECCCCCHHHHHHHHHhCCCcEEEEECC-CCCEEEEEEHHHHHHHHHhh
Confidence 36789999754 889999999999999999999999999986 56999999999999998763
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.65 E-value=7.3e-16 Score=120.39 Aligned_cols=123 Identities=17% Similarity=0.243 Sum_probs=100.4
Q ss_pred cCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhh
Q 022419 43 RIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAF 122 (297)
Q Consensus 43 ~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~ 122 (297)
..+|..+-. |..+++.+++++|+.+|+++|.++++...||+|.+. ++++|+|+..||..+
T Consensus 4 ~~~v~diM~-~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~-------~~~~Givt~~dl~~~------------ 63 (129)
T 3jtf_A 4 ERTVADIMV-PRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDR-------DNIIGILLAKDLLRY------------ 63 (129)
T ss_dssp CCBHHHHCE-EGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSST-------TCEEEEEEGGGGGGG------------
T ss_pred CCCHHHhCc-cHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC-------CcEEEEEEHHHHHhH------------
Confidence 344444433 135788999999999999999999999999998742 389999999998772
Q ss_pred ccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCc
Q 022419 123 SVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKS 202 (297)
Q Consensus 123 ~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~ 202 (297)
+. + .+
T Consensus 64 ----------------------~~---------------------------------------------------~--~~ 68 (129)
T 3jtf_A 64 ----------------------ML---------------------------------------------------E--PA 68 (129)
T ss_dssp ----------------------GT---------------------------------------------------C--TT
T ss_pred ----------------------hc---------------------------------------------------c--CC
Confidence 10 0 24
Q ss_pred cchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 203 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 203 tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
++|+++|+ |++.|.+++++.+++.+|.+++++++||+|. +|+++||||+++|++.|.+
T Consensus 69 ~~v~~~m~-----~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 69 LDIRSLVR-----PAVFIPEVKRLNVLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp SCGGGGCB-----CCCEEETTCBHHHHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHHHH
T ss_pred cCHHHHhC-----CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 56888884 3678999999999999999999999999996 4699999999999999875
No 22
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.65 E-value=4.3e-16 Score=121.21 Aligned_cols=116 Identities=19% Similarity=0.293 Sum_probs=98.6
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++...||+| + ++++|+|+..||..+++..
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~--------~~~~Givt~~dl~~~~~~~-------------------- 67 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D--------EKLVGILTERDFSRKSYLL-------------------- 67 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T--------TEEEEEEEHHHHHHHGGGS--------------------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C--------CEEEEEEehHHHHHHHHHc--------------------
Confidence 5788999999999999999999999999998 4 3899999999998641100
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
.....+++|+++|...
T Consensus 68 --------------------------------------------------------------~~~~~~~~v~~~m~~~-- 83 (135)
T 2rc3_A 68 --------------------------------------------------------------DKPVKDTQVKEIMTRQ-- 83 (135)
T ss_dssp --------------------------------------------------------------SSCGGGSBGGGTSBCS--
T ss_pred --------------------------------------------------------------CCCcccCCHHHhccCC--
Confidence 0112467899999764
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+..+.+++++.+++.+|.+++++++||+| +|+++|+||++++++.+.+.
T Consensus 84 --~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 84 --VAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp --CCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC-
T ss_pred --CeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHHhc
Confidence 89999999999999999999999999999 47999999999999998764
No 23
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.64 E-value=8.1e-16 Score=119.50 Aligned_cols=114 Identities=12% Similarity=0.240 Sum_probs=95.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+++++|+.+|+++|.++++...||+|.+. ++++|+|+..||..+
T Consensus 13 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~-------~~~vGivt~~dl~~~------------------------ 61 (127)
T 3nqr_A 13 SQMITLKRNQTLDECLDVIIESAHSRFPVISEDK-------DHIEGILMAKDLLPF------------------------ 61 (127)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST-------TCEEEEEEGGGGGGG------------------------
T ss_pred HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC-------CcEEEEEEHHHHHHH------------------------
Confidence 3588999999999999999999999999998752 389999999998772
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+. +...+++|+++|+.
T Consensus 62 ----------~~---------------------------------------------------~~~~~~~v~~~m~~--- 77 (127)
T 3nqr_A 62 ----------MR---------------------------------------------------SDAEAFSMDKVLRT--- 77 (127)
T ss_dssp ----------GS---------------------------------------------------TTCCCCCHHHHCBC---
T ss_pred ----------Hh---------------------------------------------------ccCCCCCHHHHcCC---
Confidence 10 01135679999942
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
++.|.+++++.+++.+|.+++++++||+|. +|+++||||++++++.|.+
T Consensus 78 --~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 78 --AVVVPESKRVDRMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp --CCEEETTCBHHHHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHHC--
T ss_pred --CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 468999999999999999999999999997 4699999999999998753
No 24
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.64 E-value=1.5e-15 Score=129.66 Aligned_cols=135 Identities=16% Similarity=0.276 Sum_probs=105.8
Q ss_pred CCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhccccccccccc
Q 022419 54 GGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVG 133 (297)
Q Consensus 54 ~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g 133 (297)
..+++.+++++|+.+|+++|.+|++.+.||+|.+. ++++||++..||+.++.+......
T Consensus 11 ~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~-------~~~~Givt~~di~~~~~~~~~~~~-------------- 69 (280)
T 3kh5_A 11 NKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGN-------NKVVGIITSMDIVDFMGGGSKYNL-------------- 69 (280)
T ss_dssp CSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTT-------CBEEEEEEHHHHHHHTTTSGGGHH--------------
T ss_pred CCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCC-------CeEEEEEEHHHHHHHhcccchhhh--------------
Confidence 35899999999999999999999999999999732 389999999999985321111000
Q ss_pred cccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhcc
Q 022419 134 TGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYR 213 (297)
Q Consensus 134 ~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~r 213 (297)
+ .+ ....++++. .+++|+++|..
T Consensus 70 -----------~-------------------------~~------------~~~~~~~~~-------~~~~v~~im~~-- 92 (280)
T 3kh5_A 70 -----------I-------------------------RE------------KHERNFLAA-------INEPVREIMEE-- 92 (280)
T ss_dssp -----------H-------------------------HT------------TSTTCHHHH-------TTSBGGGTSBC--
T ss_pred -----------h-------------------------hh------------ccccchhHH-------hhhhHHHhcCC--
Confidence 0 00 011122221 25789999986
Q ss_pred CCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 214 WAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 214 waPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+++.|.++.++.+++.+|.+++.+++||+|. +|+++||||+.++++.+.+...
T Consensus 93 --~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~ 145 (280)
T 3kh5_A 93 --NVITLKENADIDEAIETFLTKNVGGAPIVND-ENQLISLITERDVIRALLDKID 145 (280)
T ss_dssp --SCCCEETTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHGGGSC
T ss_pred --CCEEECCCCCHHHHHHHHHhCCCCEEEEEcC-CCEEEEEEEHHHHHHHHhhcCC
Confidence 4899999999999999999999999999987 4799999999999999876654
No 25
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.64 E-value=1.4e-15 Score=115.78 Aligned_cols=113 Identities=20% Similarity=0.320 Sum_probs=96.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|.+.|.++++...||+|.+ ++++|+|+..||..++.+
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~G~vt~~dl~~~~~~--------------------- 59 (122)
T 3kpb_A 9 KPPITAHSNISIMEAAKILIKHNINHLPIVDEH--------GKLVGIITSWDIAKALAQ--------------------- 59 (122)
T ss_dssp SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT--------SBEEEEECHHHHHHHHHT---------------------
T ss_pred CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC--------CCEEEEEEHHHHHHHHHh---------------------
Confidence 357889999999999999999999999999965 389999999999884110
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
...+|+++|..
T Consensus 60 ------------------------------------------------------------------~~~~v~~~~~~--- 70 (122)
T 3kpb_A 60 ------------------------------------------------------------------NKKTIEEIMTR--- 70 (122)
T ss_dssp ------------------------------------------------------------------TCCBGGGTSBS---
T ss_pred ------------------------------------------------------------------cccCHHHHhcC---
Confidence 12268888865
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+++.+.+++++.+++.+|.+++.+++||+|. +|+++|+||+.++++.|.+.
T Consensus 71 -~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~~l~~~ 121 (122)
T 3kpb_A 71 -NVITAHEDEPVDHVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISRLFGGK 121 (122)
T ss_dssp -SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHC--
T ss_pred -CCeEECCCCCHHHHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHHHhhcC
Confidence 4889999999999999999999999999996 47999999999999998764
No 26
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.64 E-value=2.4e-15 Score=116.74 Aligned_cols=127 Identities=16% Similarity=0.285 Sum_probs=105.6
Q ss_pred HhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHH-HHHHHHHHHHH
Q 022419 40 AFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAI-ILWVLETAELA 118 (297)
Q Consensus 40 ~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dI-v~wvLe~~e~a 118 (297)
.+...+|..+-. .+++.+..++|+.+|.++|.++++...||+|.+ ++++|+|+..++ ..++.
T Consensus 4 ~l~~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~~------ 66 (138)
T 2p9m_A 4 TLKNIKVKDVMT---KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE--------NKVIGIVTTTDIGYNLIR------ 66 (138)
T ss_dssp -CTTCBGGGTSB---CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT--------CBEEEEEEHHHHHHHHTT------
T ss_pred ccccCCHHHhhc---CCceEECCCCcHHHHHHHHHHCCCcEEEEECCC--------CeEEEEEEHHHHHHHHHh------
Confidence 356777777764 378889999999999999999999999999975 389999999999 66310
Q ss_pred HhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcC
Q 022419 119 AAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEE 198 (297)
Q Consensus 119 ~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e 198 (297)
..
T Consensus 67 ------------------------------------------------------------------------------~~ 68 (138)
T 2p9m_A 67 ------------------------------------------------------------------------------DK 68 (138)
T ss_dssp ------------------------------------------------------------------------------TC
T ss_pred ------------------------------------------------------------------------------hc
Confidence 01
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcC-----CceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYR-----LRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~r-----l~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
...+++|+++|.. |++.+.+++++.+++.+|.+++ ++++||+|. +|++.|+||++++++.+.+
T Consensus 69 ~~~~~~v~~~m~~----~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 69 YTLETTIGDVMTK----DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp CCSSCBHHHHSCS----SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred ccCCcCHHHHhCC----CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHHHh
Confidence 2346789999985 4899999999999999999999 999999996 4699999999999998865
No 27
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.63 E-value=1.5e-15 Score=124.81 Aligned_cols=128 Identities=12% Similarity=0.152 Sum_probs=104.3
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|..++|..+-. |..+++.+++++|+.+|+++|.++++...||+|.+. ++++|+|+..||..++.+
T Consensus 39 l~~~~v~diM~-~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~-------~~lvGivt~~dl~~~~~~------- 103 (172)
T 3lhh_A 39 LDERTISSLMV-PRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNV-------DDMVGIISAKQLLSESIA------- 103 (172)
T ss_dssp ----CTTTTSE-EGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSST-------TSEEEEEEHHHHHHHHHT-------
T ss_pred cCCCCHHHhCc-cHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC-------CeEEEEEEHHHHHHHHhh-------
Confidence 55667766654 235789999999999999999999999999998741 389999999999883100
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
.
T Consensus 104 -----------------------------------------------------------------------------~-- 104 (172)
T 3lhh_A 104 -----------------------------------------------------------------------------G-- 104 (172)
T ss_dssp -----------------------------------------------------------------------------T--
T ss_pred -----------------------------------------------------------------------------c--
Confidence 0
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
.+++|+++| . |++.|.+++++.+++.+|.+++++++||+|. +|+++||||+.++++.|.+..
T Consensus 105 ~~~~v~~im-~----~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 105 ERLELVDLV-K----NCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp CCCCGGGGC-B----CCEEEETTCCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHTTC
T ss_pred CcccHHHHh-c----CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHHHhCCC
Confidence 256799999 3 4799999999999999999999999999996 469999999999999987643
No 28
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.63 E-value=3.1e-15 Score=115.77 Aligned_cols=128 Identities=17% Similarity=0.321 Sum_probs=105.1
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhh
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAA 121 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~ 121 (297)
..++|..+-. .+++.+.+++|+.+|.++|.++++...||+| + ++++|+|+..||..++..
T Consensus 2 ~~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~--------~~~~Givt~~dl~~~~~~-------- 61 (133)
T 2ef7_A 2 EEEIVKEYMK---TQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G--------NKPVGIITERDIVKAIGK-------- 61 (133)
T ss_dssp CCCBGGGTSB---CSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T--------TEEEEEEEHHHHHHHHHT--------
T ss_pred CcccHHHhcc---CCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C--------CEEEEEEcHHHHHHHHhc--------
Confidence 3566666654 3688999999999999999999999999999 4 389999999999874110
Q ss_pred hccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCC
Q 022419 122 FSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFK 201 (297)
Q Consensus 122 ~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k 201 (297)
....
T Consensus 62 ----------------------------------------------------------------------------~~~~ 65 (133)
T 2ef7_A 62 ----------------------------------------------------------------------------GKSL 65 (133)
T ss_dssp ----------------------------------------------------------------------------TCCT
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 0012
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
+++|+++|.. |+..+.+++++.+++.+|.+++.+++||+|. +|+++|+||+.++++.+.+...+
T Consensus 66 ~~~v~~~~~~----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 66 ETKAEEFMTA----SLITIREDSPITGALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp TCBGGGTSEE----CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHC--
T ss_pred ccCHHHHcCC----CCEEECCCCCHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHHHHHHH
Confidence 4678999875 4889999999999999999999999999996 46999999999999998876543
No 29
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.63 E-value=1.9e-15 Score=122.37 Aligned_cols=134 Identities=15% Similarity=0.189 Sum_probs=106.3
Q ss_pred CccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhc
Q 022419 44 IPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 123 (297)
Q Consensus 44 IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~ 123 (297)
++|..+-. .+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||..++.......
T Consensus 5 ~~v~dim~---~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~--------~~lvGivt~~dl~~~~~~~~~~~----- 68 (160)
T 2o16_A 5 IKVEDMMT---RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN--------KKLLGIVSQRDLLAAQESSLQRS----- 68 (160)
T ss_dssp CBGGGTSE---ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEEHHHHHHHHHHHCC-------
T ss_pred CcHHHHhc---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------CcEEEEEeHHHHHHHHHHhhccc-----
Confidence 45555443 367889999999999999999999999999965 38999999999998643321000
Q ss_pred cccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCcc
Q 022419 124 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 203 (297)
Q Consensus 124 ~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~t 203 (297)
. ...+...++
T Consensus 69 ---------------------~-------------------------------------------------~~~~~~~~~ 78 (160)
T 2o16_A 69 ---------------------A-------------------------------------------------QGDSLAFET 78 (160)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred ---------------------c-------------------------------------------------cccchhccc
Confidence 0 000223578
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+|+++|.. +++.|.+++++.+++.+|.+++++++||+|. |+++|+||+++|++.+.+...
T Consensus 79 ~v~~im~~----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--g~lvGiit~~dil~~~~~~~~ 138 (160)
T 2o16_A 79 PLFEVMHT----DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK--DVLVGIITDSDFVTIAINLLE 138 (160)
T ss_dssp BHHHHSCS----CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET--TEEEEEECHHHHHHHHHHHHH
T ss_pred CHHHHhcC----CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHHHHHHhc
Confidence 89999986 4899999999999999999999999999996 699999999999999877553
No 30
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.62 E-value=1.6e-15 Score=121.65 Aligned_cols=127 Identities=17% Similarity=0.148 Sum_probs=106.0
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCccccee-cCCCCCCCccccceeEEEehHHHHHHHHHHHHHHH
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVK-IPDAPSSSDWKERYLGIVDYSAIILWVLETAELAA 119 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~-D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~ 119 (297)
|...+|..+-.. ..+++.+.+++|+.+|+++|.++++...||+ |.+. ++++|+|+..||..++...
T Consensus 17 l~~~~v~~iM~~-~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~-------~~lvGivt~~dl~~~~~~~----- 83 (153)
T 3oco_A 17 MNDKVASDVMVD-RTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDK-------DKIIGYAYNYDIVRQARID----- 83 (153)
T ss_dssp HHHCBHHHHSEE-GGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEE-------EEEEEEEEHHHHHHHHHHH-----
T ss_pred cCCCEeeeEecc-hhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCC-------CcEEEEEEHHHHHhHHhcC-----
Confidence 456788777642 2478999999999999999999999999999 6532 3899999999999842100
Q ss_pred hhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCC
Q 022419 120 AAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEP 199 (297)
Q Consensus 120 ~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~ 199 (297)
T Consensus 84 -------------------------------------------------------------------------------- 83 (153)
T 3oco_A 84 -------------------------------------------------------------------------------- 83 (153)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+++|+++| . |++.|.+++++.+++.+|.+++++++||+|. +|+++||||++++++.|.+-
T Consensus 84 -~~~~v~~~m-~----~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 84 -DKAKISTIM-R----DIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp -TTSBGGGTC-B----CCEEEETTSBHHHHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHHHC-
T ss_pred -CCCcHHHHh-C----CCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHHhcc
Confidence 146789999 4 4899999999999999999999999999996 46999999999999999863
No 31
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.62 E-value=1.5e-15 Score=117.48 Aligned_cols=116 Identities=18% Similarity=0.285 Sum_probs=97.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..|+... .
T Consensus 16 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~-------~---------------- 64 (133)
T 1y5h_A 16 AGVTCVGEHETLTAAAQYMREHDIGALPICGDD--------DRLHGMLTDRDIVIK-------G---------------- 64 (133)
T ss_dssp ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG--------GBEEEEEEHHHHHHT-------T----------------
T ss_pred CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC--------CeEEEEEeHHHHHHH-------H----------------
Confidence 367889999999999999999999999999865 489999999999841 1
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+. +.....+++|+++|...
T Consensus 65 ----------~~-------------------------------------------------~~~~~~~~~v~~~m~~~-- 83 (133)
T 1y5h_A 65 ----------LA-------------------------------------------------AGLDPNTATAGELARDS-- 83 (133)
T ss_dssp ----------GG-------------------------------------------------GTCCTTTSBHHHHHTTC--
T ss_pred ----------Hh-------------------------------------------------cCCCccccCHHHHhcCC--
Confidence 10 00113467899999864
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
++.+.+++++.+++.+|.+++++++||+|. |+++|+||++++++.+.+
T Consensus 84 --~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 84 --IYYVDANASIQEMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp --CCCEETTCCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC-
T ss_pred --CEEECCCCCHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 899999999999999999999999999996 699999999999998754
No 32
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.62 E-value=6e-15 Score=130.12 Aligned_cols=134 Identities=11% Similarity=0.189 Sum_probs=107.7
Q ss_pred cCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhh
Q 022419 43 RIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAF 122 (297)
Q Consensus 43 ~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~ 122 (297)
..||..+.-.-..+++.+..++++.+|+++|.++++...||+|.+ ++++|+|+..||+.++.+.
T Consensus 186 ~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~--------~~~~Giit~~dl~~~~~~~-------- 249 (323)
T 3t4n_C 186 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN--------GYLINVYEAYDVLGLIKGG-------- 249 (323)
T ss_dssp CSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEETTHHHHHHHTT--------
T ss_pred hCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCC--------CeEEEEEeHHHHHHHHhhc--------
Confidence 446666632224678999999999999999999999999999975 4899999999999842110
Q ss_pred ccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCc
Q 022419 123 SVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKS 202 (297)
Q Consensus 123 ~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~ 202 (297)
.+. ..+
T Consensus 250 -------------------------------------------------------------------~~~-------~~~ 255 (323)
T 3t4n_C 250 -------------------------------------------------------------------IYN-------DLS 255 (323)
T ss_dssp -------------------------------------------------------------------HHH-------HTT
T ss_pred -------------------------------------------------------------------hhh-------hcc
Confidence 011 024
Q ss_pred cchhhHhhhc--cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 203 TTVRSIIKSY--RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 203 tkV~dI~~s~--rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
++|+++|+.. ...|++.+.+++++.+++.+|.+++++++||||. +|+++||||+++|++.|.+.
T Consensus 256 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 256 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp SBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT-TSBEEEEEEHHHHHHHHHHC
T ss_pred CCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC-CCcEEEEEEHHHHHHHHHhc
Confidence 6788888762 1126899999999999999999999999999996 46999999999999999764
No 33
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.62 E-value=3.3e-15 Score=116.27 Aligned_cols=129 Identities=16% Similarity=0.230 Sum_probs=106.8
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|..++|..+-. .+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||... .
T Consensus 4 l~~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~-------~-- 63 (138)
T 2yzi_A 4 DMKAPIKVYMT---KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD--------GNVVGFFTKSDIIRR-------V-- 63 (138)
T ss_dssp CTTSBGGGTCB---CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT--------SCEEEEEEHHHHHHH-------T--
T ss_pred hhhhhHHHHhc---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------CcEEEEEeHHHHHHH-------H--
Confidence 45667776664 478999999999999999999999999999964 389999999999852 1
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
+. + ...
T Consensus 64 ------------------------~~-------------------------~-------------------------~~~ 69 (138)
T 2yzi_A 64 ------------------------IV-------------------------P-------------------------GLP 69 (138)
T ss_dssp ------------------------TT-------------------------T-------------------------CCC
T ss_pred ------------------------Hh-------------------------c-------------------------CCc
Confidence 10 0 012
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
.+++|+++|... ++.+.+++++.+++.+|.+++++++ |+|. +|+++|+||++++++.+.+...
T Consensus 70 ~~~~v~~~m~~~----~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 70 YDIPVERIMTRN----LITANVNTPLGEVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp TTSBGGGTCBCS----CCEEETTSBHHHHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHHCCSC
T ss_pred ccCCHHHHhhCC----CeEECCCCcHHHHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHHHHHH
Confidence 457899999764 8999999999999999999999999 9996 4699999999999999987553
No 34
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.62 E-value=7.4e-16 Score=121.66 Aligned_cols=116 Identities=16% Similarity=0.190 Sum_probs=96.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++.+.||+|.+. ++++|+|+..||..++..
T Consensus 13 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~-------~~~vGivt~~dl~~~~~~--------------------- 64 (136)
T 3lfr_A 13 SQMISIKATQTPREFLPAVIDAAHSRYPVIGESH-------DDVLGVLLAKDLLPLILK--------------------- 64 (136)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST-------TCEEEEEEGGGGGGGGGS---------------------
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC-------CcEEEEEEHHHHHHHHHh---------------------
Confidence 5788999999999999999999999999998752 389999999999873100
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
....+.+|+++|+
T Consensus 65 ---------------------------------------------------------------~~~~~~~v~~~m~---- 77 (136)
T 3lfr_A 65 ---------------------------------------------------------------ADGDSDDVKKLLR---- 77 (136)
T ss_dssp ---------------------------------------------------------------SSGGGCCGGGTCB----
T ss_pred ---------------------------------------------------------------ccCCCcCHHHHcC----
Confidence 0113567899984
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
|++.|.+++++.+++.+|.+++++.+||+|. +|+++||||++++++.|.+-
T Consensus 78 -~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 78 -PATFVPESKRLNVLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp -CCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC---
T ss_pred -CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhCC
Confidence 3688999999999999999999999999997 46999999999999988753
No 35
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.61 E-value=2.2e-15 Score=122.24 Aligned_cols=160 Identities=17% Similarity=0.211 Sum_probs=112.8
Q ss_pred HHhhcCccccCCCCCC-CCcEEe--cCCCCHHHHHHHHHHCCCccccee--cCCCCCCCccccceeEEEehHHHHHHHHH
Q 022419 39 AAFARIPVLSFPNVPG-GRVIEI--MADTTIPDAVKILSECNILSAPVK--IPDAPSSSDWKERYLGIVDYSAIILWVLE 113 (297)
Q Consensus 39 ~~fa~IPVsSfP~~~~-~~VIeI--~~d~sI~dAvkiLse~nIlsAPV~--D~da~~~~~w~dryiGiVd~~dIv~wvLe 113 (297)
.++..++|..+-.... .+++.+ .+++|+.+|+++|.++++.+.||+ |.+ ++++|+|+..||..++..
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~--------~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES--------QRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT--------CBEEEEEEHHHHHHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC--------CeEEEEEEHHHHHHHHHh
Confidence 4456777777765421 237788 999999999999999999999999 443 489999999999987543
Q ss_pred HHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHH
Q 022419 114 TAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKV 193 (297)
Q Consensus 114 ~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~ 193 (297)
...... ++-.+.. . ......+.
T Consensus 78 ~~~~~~-----------~~~~~~~-------~----------------------------~~~~~~~~------------ 99 (185)
T 2j9l_A 78 ARKKQD-----------GVVSTSI-------I----------------------------YFTEHSPP------------ 99 (185)
T ss_dssp HHTSCS-----------CCCTTCE-------E----------------------------ECSSSCCC------------
T ss_pred hcccCC-----------Cccccce-------e----------------------------ecccCCcc------------
Confidence 211000 0000000 0 00000000
Q ss_pred hhhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCc
Q 022419 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRD 271 (297)
Q Consensus 194 L~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~d 271 (297)
.......+++|+++|... ++.|.+++++.+++.+|.+++++++||+| +|+++|+||+++|++.+.+....+
T Consensus 100 -~~~~~~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~l~~~~~~~ 170 (185)
T 2j9l_A 100 -LPPYTPPTLKLRNILDLS----PFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKHIAQMANQD 170 (185)
T ss_dssp -CCTTCCCCEECGGGEESS----CCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHHHCC--
T ss_pred -cccccccCccHHHhhCcC----CeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHHHHHhhccc
Confidence 001234678899999764 89999999999999999999999999999 579999999999999999877654
No 36
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=8.1e-15 Score=117.65 Aligned_cols=131 Identities=12% Similarity=0.122 Sum_probs=103.0
Q ss_pred CCCcEEecCCCCHHHHHHHHHHCCCcc-cceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccc
Q 022419 54 GGRVIEIMADTTIPDAVKILSECNILS-APVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGV 132 (297)
Q Consensus 54 ~~~VIeI~~d~sI~dAvkiLse~nIls-APV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~ 132 (297)
..+++.+.+++|+.+|+++|.++++.+ .||+|.+ +++|+|+..||..++.... . .
T Consensus 23 ~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~---------~~vGivt~~dl~~~~~~~~--~-~------------ 78 (157)
T 1o50_A 23 SLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN---------KLVGMIPVMHLLKVSGFHF--F-G------------ 78 (157)
T ss_dssp CCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT---------EEEEEEEHHHHHHHHHHHH--H-C------------
T ss_pred cCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC---------EEEEEEEHHHHHHHHhhhH--H-h------------
Confidence 357899999999999999999999999 9999976 7999999999998644221 0 0
Q ss_pred ccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhc
Q 022419 133 GTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSY 212 (297)
Q Consensus 133 g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~ 212 (297)
.+. . ...|.+ ......+++|+++|..
T Consensus 79 -----------~~~--~-------------------------------------~~~~~~---~~~~~~~~~v~~im~~- 104 (157)
T 1o50_A 79 -----------FIP--K-------------------------------------EELIRS---SMKRLIAKNASEIMLD- 104 (157)
T ss_dssp -----------CCC-------------------------------------------------CCCCCSSCBHHHHCBC-
T ss_pred -----------hhc--c-------------------------------------HHHHHH---HHHHHcCCcHHHHcCC-
Confidence 000 0 001110 1133467899999973
Q ss_pred cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 213 RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 213 rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+++|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.+.+.
T Consensus 105 ----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 105 ----PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-KGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp ----CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHS
T ss_pred ----CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-CCEEEEEEEHHHHHHHHHHh
Confidence 578999999999999999999999999996 46999999999999998764
No 37
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.60 E-value=3e-15 Score=117.53 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=102.4
Q ss_pred CccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhc
Q 022419 44 IPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 123 (297)
Q Consensus 44 IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~ 123 (297)
++|..+.. .+++.+.+++|+.+|+++|.++++...||+|.+. .++++|+|+..||..++.+
T Consensus 5 ~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~------~~~~~Givt~~dl~~~~~~---------- 65 (141)
T 2rih_A 5 IRTSELLK---RPPVSLPETATIREVATELAKNRVGLAVLTARDN------PKRPVAVVSERDILRAVAQ---------- 65 (141)
T ss_dssp CBGGGGCC---SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTE------EEEEEEEEEHHHHHHHHHT----------
T ss_pred eEHHHHhc---CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCC------cceeEEEEEHHHHHHHHhc----------
Confidence 45555553 4789999999999999999999999999999761 0279999999999884210
Q ss_pred cccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCcc
Q 022419 124 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 203 (297)
Q Consensus 124 ~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~t 203 (297)
....++
T Consensus 66 --------------------------------------------------------------------------~~~~~~ 71 (141)
T 2rih_A 66 --------------------------------------------------------------------------RLDLDG 71 (141)
T ss_dssp --------------------------------------------------------------------------TCCTTS
T ss_pred --------------------------------------------------------------------------CCCCCC
Confidence 001256
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+|+++|.. |++.|.++ ++.+++.+|.+++++++||+|. +|+++|+||++++++.+..+
T Consensus 72 ~v~~~m~~----~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~~~ 129 (141)
T 2rih_A 72 PAMPIANS----PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-NGELVGVLSIRDLCFERAIL 129 (141)
T ss_dssp BSGGGCBC----CCEEETTS-BHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHSCHHHH
T ss_pred CHHHHcCC----CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-CCcEEEEEEHHHHHHHHHHH
Confidence 78999875 48999999 9999999999999999999996 47999999999998877654
No 38
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.60 E-value=1.1e-15 Score=121.46 Aligned_cols=136 Identities=15% Similarity=0.211 Sum_probs=107.4
Q ss_pred HhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHH
Q 022419 40 AFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAA 119 (297)
Q Consensus 40 ~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~ 119 (297)
.|..++|..+... ..+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++...
T Consensus 7 ~l~~~~v~~im~~-~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--------~~~~Givt~~dl~~~~~~~----- 72 (157)
T 2emq_A 7 EFMQMTVKPFLIP-ADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS--------YKLHGLISMTMMMDAILGL----- 72 (157)
T ss_dssp ---CCBSTTTCEE-GGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT--------CCEEEEEEHHHHHHHSBCS-----
T ss_pred hHhhCcHHhhccC-CccceEECCCCcHHHHHHHHHHCCceEEEEEcCC--------CCEEEEeeHHHHHHHHhcc-----
Confidence 3567788777642 2378899999999999999999999999999975 3899999999998841000
Q ss_pred hhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCC
Q 022419 120 AAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEP 199 (297)
Q Consensus 120 ~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~ 199 (297)
.. + +.+.
T Consensus 73 -----------------------------~~----------------------------------------~----~~~~ 79 (157)
T 2emq_A 73 -----------------------------ER----------------------------------------I----EFER 79 (157)
T ss_dssp -----------------------------SS----------------------------------------B----CGGG
T ss_pred -----------------------------cc----------------------------------------c----chHH
Confidence 00 0 0012
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+.+++|+++|... ++.|.+++++.+++.+|.++++ +||||. +|+++|+||+++|++.+.....
T Consensus 80 ~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 80 LETMKVEEVMNRN----IPRLRLDDSLMKAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp GGTCBGGGTCBCC----CCEEETTSBHHHHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHHHTTC
T ss_pred hcCCcHHHHhCCC----CceecCCCcHHHHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHHHHhh
Confidence 3567899999864 8999999999999999999988 999996 4699999999999999987654
No 39
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.60 E-value=4.2e-15 Score=118.38 Aligned_cols=121 Identities=10% Similarity=0.138 Sum_probs=101.5
Q ss_pred CccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhc
Q 022419 44 IPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 123 (297)
Q Consensus 44 IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~ 123 (297)
.+|..+-.. ..+++.+.+++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++.+
T Consensus 28 ~~v~dim~~-~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~~---------- 88 (149)
T 3k2v_A 28 LRVNDIMHT-GDEIPHVGLQATLRDALLEITRKNLGMTAICDDD--------MNIIGIFTDGDLRRVFDT---------- 88 (149)
T ss_dssp SBGGGTSBC-GGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT--------CBEEEEEEHHHHHHHHCS----------
T ss_pred cCHHHHhcC-CCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC--------CcEEEEecHHHHHHHHhc----------
Confidence 567666542 2378999999999999999999999999999965 389999999999884100
Q ss_pred cccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCcc
Q 022419 124 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 203 (297)
Q Consensus 124 ~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~t 203 (297)
...+.++
T Consensus 89 -------------------------------------------------------------------------~~~~~~~ 95 (149)
T 3k2v_A 89 -------------------------------------------------------------------------GVDMRDA 95 (149)
T ss_dssp -------------------------------------------------------------------------SSCCTTC
T ss_pred -------------------------------------------------------------------------CCCcccC
Confidence 0123567
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
+|+++|... ++.|.+++++.+++.+|.+++++++||+|.+ +++|+||+++|++
T Consensus 96 ~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--~~~Giit~~dil~ 148 (149)
T 3k2v_A 96 SIADVMTRG----GIRIRPGTLAVDALNLMQSRHITCVLVADGD--HLLGVVHMHDLLR 148 (149)
T ss_dssp BHHHHSEES----CCEECTTCBHHHHHHHHHHHTCSEEEEEETT--EEEEEEEHHHHTC
T ss_pred cHHHHcCCC----CeEECCCCCHHHHHHHHHHcCCCEEEEecCC--EEEEEEEHHHhhc
Confidence 899999865 7899999999999999999999999999964 9999999999874
No 40
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.58 E-value=3.5e-15 Score=119.64 Aligned_cols=136 Identities=14% Similarity=0.193 Sum_probs=106.6
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|...+|..+-.. ..+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||..++....
T Consensus 11 l~~~~v~~im~~-~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~--------~~lvGivt~~dl~~~~~~~~----- 76 (159)
T 1yav_A 11 LLEATVGQFMIE-ADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS--------YRLHGLIGTNMIMNSIFGLE----- 76 (159)
T ss_dssp CTTCBHHHHSEE-GGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT--------CBEEEEEEHHHHHHHHBCSS-----
T ss_pred HhHhhHHHHhCC-ccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC--------CCEEEEeEHHHHHHHhhhhc-----
Confidence 345666655531 2368899999999999999999999999999975 38999999999988421000
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
. + ..+.+
T Consensus 77 --------------------------------------------------------------------~-~----~~~~~ 83 (159)
T 1yav_A 77 --------------------------------------------------------------------R-I----EFEKL 83 (159)
T ss_dssp --------------------------------------------------------------------S-B----CGGGT
T ss_pred --------------------------------------------------------------------c-c----chhhh
Confidence 0 0 00124
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
.+++|+++|... ++.|.+++++.+++.+|.++++ +||+|. +|+++|+||+++|++.+.+....
T Consensus 84 ~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 84 DQITVEEVMLTD----IPRLHINDPIMKGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp TTSBHHHHSBCS----CCEEETTSBHHHHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHHHHC--
T ss_pred ccCCHHHhcCCC----CceEcCCCCHHHHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHHHHHHh
Confidence 567899999874 8999999999999999999987 999997 46999999999999999876543
No 41
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.57 E-value=1.4e-14 Score=124.52 Aligned_cols=127 Identities=11% Similarity=0.139 Sum_probs=104.0
Q ss_pred cCccccCCCCCCCCcEEecCCCCHHHHHHHHHHC---CCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHH
Q 022419 43 RIPVLSFPNVPGGRVIEIMADTTIPDAVKILSEC---NILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAA 119 (297)
Q Consensus 43 ~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~---nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~ 119 (297)
...+..+- ..+++.++.++|+.+|++.|.++ ++...||+|.+ ++++|+|+..|++. +
T Consensus 53 ~~~v~~iM---~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~--------~~lvGivt~~dll~--------~- 112 (205)
T 3kxr_A 53 ENEIGRYT---DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA--------DKYLGTVRRYDIFK--------H- 112 (205)
T ss_dssp TTCGGGGC---BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT--------CBEEEEEEHHHHTT--------S-
T ss_pred cchHHhhc---cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC--------CeEEEEEEHHHHHh--------C-
Confidence 33444444 34789999999999999999998 89999999975 48999999888754 1
Q ss_pred hhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCC
Q 022419 120 AAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEP 199 (297)
Q Consensus 120 ~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~ 199 (297)
T Consensus 113 -------------------------------------------------------------------------------- 112 (205)
T 3kxr_A 113 -------------------------------------------------------------------------------- 112 (205)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhh
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFD 274 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~ 274 (297)
..+++|++||... ++.|.+++++.+++.+|.+|+++.+||||. +|+++||||..+|++.+.+....|.+.
T Consensus 113 ~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-~g~lvGiIT~~Dil~~i~~e~~ed~~~ 182 (205)
T 3kxr_A 113 EPHEPLISLLSED----SRALTANTTLLDAAEAIEHSREIELPVIDD-AGELIGRVTLRAATALVREHYEAQLMA 182 (205)
T ss_dssp CTTSBGGGGCCSS----CCCEETTSCHHHHHHHHHTSSCSEEEEECT-TSBEEEEEEHHHHHHHHHHHHC-----
T ss_pred CCcchHHHHhcCC----CeEECCCCCHHHHHHHHHhcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 0246799999764 899999999999999999999999999997 469999999999999999887766443
No 42
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.57 E-value=4.6e-15 Score=119.92 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=102.0
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
|..++|..+-.. ..+++.+++++|+.+|+++|.++++...||+|.+. ++++|+|+..||..+
T Consensus 35 l~~~~v~diM~~-~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~-------~~lvGivt~~dl~~~---------- 96 (156)
T 3oi8_A 35 FSDLEVRDAMIT-RSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDK-------DEVLGILHAKDLLKY---------- 96 (156)
T ss_dssp HTTCBGGGTCEE-GGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST-------TCEEEEEEGGGGGGG----------
T ss_pred cCCCCHhheeee-HHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC-------CcEEEEEEHHHHHHH----------
Confidence 567888887652 34789999999999999999999999999999752 389999999998872
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
+. +.
T Consensus 97 ------------------------~~---------------------------------------------------~~- 100 (156)
T 3oi8_A 97 ------------------------MF---------------------------------------------------NP- 100 (156)
T ss_dssp ------------------------SS---------------------------------------------------CG-
T ss_pred ------------------------HH---------------------------------------------------cC-
Confidence 10 00
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
.+++|+++|+ |++.|.+++++.+++.+|.+++++++||+|. +|+++||||+++|++
T Consensus 101 ~~~~v~~im~-----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~Dile 156 (156)
T 3oi8_A 101 EQFHLKSILR-----PAVFVPEGKSLTALLKEFREQRNHMAIVIDE-YGGTSGLVTFEDIIE 156 (156)
T ss_dssp GGCCHHHHCB-----CCCEEETTSBHHHHHHHHHHTTCCEEEEECT-TSSEEEEEEHHHHCC
T ss_pred CcccHHHHcC-----CCEEECCCCCHHHHHHHHHhcCCeEEEEECC-CCCEEEEEEHHHhcC
Confidence 3467999994 3688999999999999999999999999997 469999999999863
No 43
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.56 E-value=1.8e-14 Score=120.20 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=109.9
Q ss_pred CCCHHHH--HHHH--hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehH
Q 022419 30 PHSLQET--LTAA--FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYS 105 (297)
Q Consensus 30 ~~~~~e~--Ln~~--fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~ 105 (297)
.++..|+ ++.. |..++|..+-. |..+++.+++++|+.+|+++|.++++.+.||+|.+. ++++|||+..
T Consensus 18 ~l~~~e~~~i~~~l~l~~~~v~diM~-~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-------~~lvGivt~~ 89 (173)
T 3ocm_A 18 AFGVEERNMVSGVLTLAERSIRSIMT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSL-------DEVVGIGRAK 89 (173)
T ss_dssp CCCHHHHHHHHHHHHHTTSCSTTTSE-EGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSST-------TSEEEEEEHH
T ss_pred CcCHHHHHHHHHHhccCCCCHHHhCC-cHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCC-------CCEEEEEEHH
Confidence 3444444 4443 56788877764 245789999999999999999999999999998652 3899999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhh
Q 022419 106 AIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADR 185 (297)
Q Consensus 106 dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~ 185 (297)
||..++.+.
T Consensus 90 Dl~~~~~~~----------------------------------------------------------------------- 98 (173)
T 3ocm_A 90 DLVADLITE----------------------------------------------------------------------- 98 (173)
T ss_dssp HHHHHHHHH-----------------------------------------------------------------------
T ss_pred HHHHHHhcC-----------------------------------------------------------------------
Confidence 999842100
Q ss_pred hhhhHHHHhhhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 186 LHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 186 ~~~df~~~L~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
.+++|+ +++ |++.|.+++++.+++.+|.+++++++||+|. +|+++||||..+|++.|.
T Consensus 99 ---------------~~~~v~-~~~-----~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 99 ---------------GRVRRN-RLR-----DPIIVHESIGILRLMDTLKRSRGQLVLVADE-FGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp ---------------SSCCGG-GSB-----CCCEECGGGCHHHHHHHHHHSTTCCEEEECT-TCCEEEEECHHHHHHHHH
T ss_pred ---------------CcchhH-hcC-----CCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-CCCEEEEEeHHHHHHHHh
Confidence 134566 442 4688999999999999999999999999986 469999999999999998
Q ss_pred hcc
Q 022419 266 GCK 268 (297)
Q Consensus 266 ~~~ 268 (297)
+..
T Consensus 157 ~~i 159 (173)
T 3ocm_A 157 GEF 159 (173)
T ss_dssp CCC
T ss_pred CcC
Confidence 643
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.56 E-value=4.8e-15 Score=122.45 Aligned_cols=125 Identities=20% Similarity=0.272 Sum_probs=103.8
Q ss_pred CccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhc
Q 022419 44 IPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 123 (297)
Q Consensus 44 IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~ 123 (297)
++|..+-. .+++.+..++|+.+|+++|.++++...||+|.+ ++++|+|+..||..++...
T Consensus 9 ~~v~~im~---~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~--------g~~vGivt~~dl~~~~~~~--------- 68 (184)
T 1pvm_A 9 MRVEKIMN---SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN--------GNDVGLLSERSIIKRFIPR--------- 68 (184)
T ss_dssp CBGGGTSB---TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT--------SCEEEEEEHHHHHHHTGGG---------
T ss_pred cCHHHhcC---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------CcEEEEEeHHHHHHHHhhc---------
Confidence 45555543 478999999999999999999999999999865 3899999999998741100
Q ss_pred cccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCcc
Q 022419 124 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 203 (297)
Q Consensus 124 ~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~t 203 (297)
.....+.
T Consensus 69 -------------------------------------------------------------------------~~~~~~~ 75 (184)
T 1pvm_A 69 -------------------------------------------------------------------------NKKPDEV 75 (184)
T ss_dssp -------------------------------------------------------------------------CCCGGGS
T ss_pred -------------------------------------------------------------------------ccCcccC
Confidence 0122456
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
+|+++|.. |++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.+.+
T Consensus 76 ~v~~im~~----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 76 PIRLVMRK----PIPKVKSDYDVKDVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp BGGGTSBS----SCCEEETTCBHHHHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTSCH
T ss_pred CHHHHhCC----CCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHHh
Confidence 79999976 4899999999999999999999999999996 3699999999999987765
No 45
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.56 E-value=1.2e-14 Score=126.74 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=104.3
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+..++++.+|+++|.++++...||+|.+ ++++|+|+..||+.++.+..+...
T Consensus 164 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~--------~~~~Givt~~dl~~~~~~~~~~~~--------------- 220 (296)
T 3ddj_A 164 TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDD--------NKVVGIVTVVNAIKQLAKAVDKLD--------------- 220 (296)
T ss_dssp CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTT--------SCEEEEEEHHHHHHHHHHHHHHTC---------------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC--------CEEEEEEEHHHHHHHHHHHHhhcC---------------
Confidence 578899999999999999999999999999965 489999999999986442211100
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
. +...+.+|+++|..
T Consensus 221 -----------------------------------------------------~---------~~~~~~~v~~~m~~--- 235 (296)
T 3ddj_A 221 -----------------------------------------------------P---------DYFYGKVVKDVMVT--- 235 (296)
T ss_dssp -----------------------------------------------------T---------HHHHTCBHHHHSBC---
T ss_pred -----------------------------------------------------h---------hhhcCcCHHHHhCC---
Confidence 0 11246789999986
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
|++.|.+++++.+++.+|.+++++++||+|. +|+++||||+++|++.|.+...
T Consensus 236 -~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 236 -NLVTIDELASVNRAAAEMIVKRIGSLLILNK-DNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp -CCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHHH
T ss_pred -CCeEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEcHHHHHHHHHHHhc
Confidence 4899999999999999999999999999997 4699999999999999987654
No 46
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=1.1e-14 Score=126.87 Aligned_cols=138 Identities=10% Similarity=0.143 Sum_probs=109.2
Q ss_pred hhcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHh
Q 022419 41 FARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120 (297)
Q Consensus 41 fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~ 120 (297)
+...+|+.+-. .+++.+++++|+.+|+++|.++++.++||+| + +++|+++..||+.++....+.
T Consensus 17 ~~~~~V~dim~---~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~---------~l~GivT~~Di~~~~~~~~~~--- 80 (296)
T 3ddj_A 17 FQGMNIETLMI---KNPPILSKEDRLGSAFKKINEGGIGRIIVAN-E---------KIEGLLTTRDLLSTVESYCKD--- 80 (296)
T ss_dssp TCCSSGGGTCE---ESCCEECTTSBHHHHHHHTTGGGCCEEEEES-S---------SEEEEEEHHHHHGGGTTCC-----
T ss_pred hcccCHHHhcc---CCCcEECCCccHHHHHHHHHHCCCceEEEEC-C---------eEEEEEeHHHHHHHhcccccc---
Confidence 44556665553 4789999999999999999999999999999 4 899999999999852211000
Q ss_pred hhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCC
Q 022419 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200 (297)
Q Consensus 121 ~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~ 200 (297)
.....+|++.
T Consensus 81 ---------------------------------------------------------------~~~~~~~~~~------- 90 (296)
T 3ddj_A 81 ---------------------------------------------------------------SCSQGDLYHI------- 90 (296)
T ss_dssp ----------------------------------------------------------------CCHHHHHHH-------
T ss_pred ---------------------------------------------------------------cccchhhHHH-------
Confidence 0112334422
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
.+.+|+++|... ++.|.+++++.+++.+|.+++++++||+|. +++++||||+.++++.+.....
T Consensus 91 ~~~~v~~im~~~----~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~lvGivt~~dl~~~~~~~~~ 154 (296)
T 3ddj_A 91 STTPIIDYMTPN----PVTVYNTSDEFTAINIMVTRNFGSLPVVDI-NDKPVGIVTEREFLLLYKDLDE 154 (296)
T ss_dssp HTSBGGGTSEES----CCCEETTSCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHGGGGGGSCC
T ss_pred hcccHHHhccCC----CEEEcCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHhhhcccc
Confidence 367899999864 889999999999999999999999999987 4699999999999988765443
No 47
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.54 E-value=5.2e-14 Score=124.63 Aligned_cols=136 Identities=12% Similarity=0.196 Sum_probs=107.3
Q ss_pred cCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhh
Q 022419 43 RIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAF 122 (297)
Q Consensus 43 ~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~ 122 (297)
..||..+...-..+++.+..++++.+|+++|.++++...||+|.+ ++++|+|+..||+.++.+.
T Consensus 181 ~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~--------~~~~Giit~~dl~~~~~~~-------- 244 (334)
T 2qrd_G 181 RVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSE--------GTLLNVYESVDVMHLIQDG-------- 244 (334)
T ss_dssp CCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT--------CBEEEEEETHHHHHHHTTS--------
T ss_pred hCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCC--------CcEEEEEEHHHHHHHhhcc--------
Confidence 467766532224678899999999999999999999999999965 3899999999998841100
Q ss_pred ccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCc
Q 022419 123 SVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKS 202 (297)
Q Consensus 123 ~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~ 202 (297)
. + ...+
T Consensus 245 ----------------------~---------------------------------------------~-------~~~~ 250 (334)
T 2qrd_G 245 ----------------------D---------------------------------------------Y-------SNLD 250 (334)
T ss_dssp ----------------------C---------------------------------------------G-------GGGG
T ss_pred ----------------------c---------------------------------------------c-------cccc
Confidence 0 0 0124
Q ss_pred cchhhHhhhc--cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 203 TTVRSIIKSY--RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 203 tkV~dI~~s~--rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
++|+++|... .+.|++.|.+++++.+++.+|.+++++++||||. +|+++||||+++|++.+.+...
T Consensus 251 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~l~Giit~~dil~~~~~~~~ 318 (334)
T 2qrd_G 251 LSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE-NLKLEGILSLADILNYIIYDKT 318 (334)
T ss_dssp SBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT-TCBEEEEEEHHHHHHHHHSCCC
T ss_pred CcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHHhccc
Confidence 5688888641 1135889999999999999999999999999996 4699999999999999987654
No 48
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.54 E-value=7.5e-15 Score=126.32 Aligned_cols=61 Identities=21% Similarity=0.334 Sum_probs=49.1
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHH
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGL 264 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L 264 (297)
..+.+|++||+. .+++.+.+++++.+++.+|.+++++++||+|.+ |+++||||..++++..
T Consensus 182 ~~~~~v~~im~~---~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 182 VQSLPVDYVMTK---DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGGSBHHHHSBC---TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred hcCCceeeEecC---CccEEECCCCcHHHHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 356789999983 238899999999999999999999999999974 7999999999998764
No 49
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.53 E-value=3.8e-14 Score=121.27 Aligned_cols=122 Identities=11% Similarity=0.146 Sum_probs=102.3
Q ss_pred cccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhccc
Q 022419 46 VLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVG 125 (297)
Q Consensus 46 VsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~ 125 (297)
++++-.....+++.+.+++|+.||.++|.++++.+.||+|.+ ++++|+|+..||...
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--------~~l~Givt~~dl~~~--------------- 68 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDRE--------GHFRGVVNKEDLLDL--------------- 68 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT--------SBEEEEEEGGGGTTS---------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC--------CEEEEEEEHHHHHhh---------------
Confidence 333333345688999999999999999999999999999965 389999999987651
Q ss_pred cccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccch
Q 022419 126 TATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTV 205 (297)
Q Consensus 126 ~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV 205 (297)
+ .+++|
T Consensus 69 -------------------~-------------------------------------------------------~~~~v 74 (213)
T 1vr9_A 69 -------------------D-------------------------------------------------------LDSSV 74 (213)
T ss_dssp -------------------C-------------------------------------------------------TTSBS
T ss_pred -------------------c-------------------------------------------------------CCCcH
Confidence 0 13569
Q ss_pred hhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 206 RSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 206 ~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+++|... ++.+.+++++.+++.+|.+++++++||+|. +|+++||||..++++.+....+
T Consensus 75 ~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~~~~~ 133 (213)
T 1vr9_A 75 FNKVSLP----DFFVHEEDNITHALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALIEALA 133 (213)
T ss_dssp GGGCBCT----TCCEETTSBHHHHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHHHSCC
T ss_pred HHHccCC----CEEECCCCcHHHHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHHhc
Confidence 9999764 889999999999999999999999999996 4799999999999999876544
No 50
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.52 E-value=3.9e-14 Score=120.82 Aligned_cols=125 Identities=15% Similarity=0.262 Sum_probs=98.9
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+..++++.+|.+.|.++++...||++.+ +++|+|+..||+.++........
T Consensus 156 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~---------~~~Givt~~dl~~~~~~~~~~~~--------------- 211 (280)
T 3kh5_A 156 RDVIVATPGERLKDVARTMVRNGFRRLPVVSEG---------RLVGIITSTDFIKLLGSDWAFNH--------------- 211 (280)
T ss_dssp CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETT---------EEEEEEEHHHHHHHHTSHHHHHH---------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECC---------EEEEEEEHHHHHHHHhhhhhhhh---------------
Confidence 567899999999999999999999999999543 89999999999885322111110
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+. . ..+. ...+++|+++|+.
T Consensus 212 ----------~~-~---------------------------------------~~~~-------~~~~~~v~~~m~~--- 231 (280)
T 3kh5_A 212 ----------MQ-T---------------------------------------GNVR-------EITNVRMEEIMKR--- 231 (280)
T ss_dssp ----------HH-S---------------------------------------CCTH-------HHHHCBHHHHSBS---
T ss_pred ----------hc-c---------------------------------------cchh-------hhhCCcHHHHhcC---
Confidence 00 0 0000 0135789999975
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
|++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.|+
T Consensus 232 -~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Givt~~dil~~la 280 (280)
T 3kh5_A 232 -DVITAKEGDKLKKIAEIMVTNDIGALPVVDE-NLRIKGIITEKDVLKYFA 280 (280)
T ss_dssp -SCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHGGGGC
T ss_pred -CCEEECCCCCHHHHHHHHHHCCCCEEEEECC-CCeEEEEEeHHHHHHhhC
Confidence 4899999999999999999999999999997 469999999999998763
No 51
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.50 E-value=2.3e-14 Score=123.09 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=103.3
Q ss_pred cCccccCCCCCCCCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHH------HHHHHHH
Q 022419 43 RIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIIL------WVLETAE 116 (297)
Q Consensus 43 ~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~------wvLe~~e 116 (297)
..|+..+- ..+++.+..++++.+|.+.|.++++...||+|.+ ++++|+|+..||+. ++-. .+
T Consensus 125 ~~~v~~~m---~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~--------~~~~Giit~~dl~~~~~~~~~~~~-~~ 192 (282)
T 2yzq_A 125 GVEIEPYY---QRYVSIVWEGTPLKAALKALLLSNSMALPVVDSE--------GNLVGIVDETDLLRDSEIVRIMKS-TE 192 (282)
T ss_dssp GCBSTTTS---BSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTT--------SCEEEEEEGGGGGGCGGGCC-------
T ss_pred cCcHHHHh---CCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCC--------CeEEEEEEHHHHhhhhhhhhhhcc-ch
Confidence 45665544 3577899999999999999999999999999865 38999999999983 2110 00
Q ss_pred HHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhh
Q 022419 117 LAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQ 196 (297)
Q Consensus 117 ~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~ 196 (297)
.... + .... +. + ....+++.. .
T Consensus 193 ~~~~----------~-------~~~~--~~---~----------------------------------~~~~~~~~~--~ 214 (282)
T 2yzq_A 193 LAAS----------S-------EEEW--IL---E----------------------------------SHPTLLFEK--F 214 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhh----------h-------hhhh--hc---c----------------------------------cchHHHHhH--h
Confidence 0000 0 0000 00 0 000111110 0
Q ss_pred cCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 197 EEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 197 ~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.....+++|+++|.. |++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.+.+.
T Consensus 215 ~~~~~~~~v~~im~~----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~lvGiit~~Dil~~~~~~ 280 (282)
T 2yzq_A 215 ELQLPNKPVAEIMTR----DVIVATPHMTVHEVALKMAKYSIEQLPVIRG-EGDLIGLIRDFDLLKVLVKS 280 (282)
T ss_dssp ----CCCBGGGTCBS----SCCCBCTTSBHHHHHHHHHHHTCSEEEEEET-TTEEEEEEEHHHHGGGGCC-
T ss_pred hhhhccCCHHHhcCC----CCceeCCCCCHHHHHHHHHHcCcceeEEECC-CCCEEEEEeHHHHHHHHHhh
Confidence 122457899999986 4899999999999999999999999999995 46999999999999988764
No 52
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.47 E-value=1.7e-13 Score=123.10 Aligned_cols=125 Identities=15% Similarity=0.244 Sum_probs=104.6
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHC-----CCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHH
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSEC-----NILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAE 116 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~-----nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e 116 (297)
...+|..+- ..+++.++.++|+.+|++.|.++ ++...||+|.+ ++++|+|+..|++.+
T Consensus 135 ~~~~v~~iM---~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~--------~~lvGivt~~dll~~------ 197 (286)
T 2oux_A 135 EDETAGAIM---TTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE--------NHLVGVISLRDLIVN------ 197 (286)
T ss_dssp CTTBHHHHC---BSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT--------CBEEEEEEHHHHTTS------
T ss_pred ChHHHHHhC---CCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC--------CeEEEEEEHHHHHcC------
Confidence 344444444 34789999999999999999998 78889999975 389999999998761
Q ss_pred HHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhh
Q 022419 117 LAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQ 196 (297)
Q Consensus 117 ~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~ 196 (297)
T Consensus 198 -------------------------------------------------------------------------------- 197 (286)
T 2oux_A 198 -------------------------------------------------------------------------------- 197 (286)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCc
Q 022419 197 EEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRD 271 (297)
Q Consensus 197 ~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~d 271 (297)
..+++|+++|... ++.|.+++++.+++.+|.+|+++++||||. +|+++||||..+|++.+.+....|
T Consensus 198 ---~~~~~v~~im~~~----~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~i~~e~~ed 264 (286)
T 2oux_A 198 ---DDDTLIADILNER----VISVHVGDDQEDVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDVIDDEAASD 264 (286)
T ss_dssp ---CTTSBHHHHSBSC----CCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHHHC-
T ss_pred ---CCCCcHHHHcCCC----CeeecCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHHHHhHHH
Confidence 0246799999764 899999999999999999999999999997 469999999999999998776554
No 53
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.44 E-value=3.3e-13 Score=131.06 Aligned_cols=130 Identities=14% Similarity=0.164 Sum_probs=109.5
Q ss_pred HhhcCccccCCCCCCCCcEEecCC-CCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHH
Q 022419 40 AFARIPVLSFPNVPGGRVIEIMAD-TTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELA 118 (297)
Q Consensus 40 ~fa~IPVsSfP~~~~~~VIeI~~d-~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a 118 (297)
-|...+|..+.. .+++.+.++ +|+.||+++|.++++...||+|.+. ++++|||+..||+.+++..
T Consensus 380 ~l~~~~V~diM~---~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~-------g~lvGiVt~~Dll~~l~~~---- 445 (527)
T 3pc3_A 380 WWWSLAIAELEL---PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD-------GSVLGVVGQETLITQIVSM---- 445 (527)
T ss_dssp TTTTSBGGGGCC---CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT-------CCEEEEEEHHHHHHHHHHH----
T ss_pred cccCCcHHHhCc---CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC-------CEEEEEEEHHHHHHHHHhc----
Confidence 377888888875 478999999 9999999999999999999999321 3899999999999853321
Q ss_pred HhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcC
Q 022419 119 AAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEE 198 (297)
Q Consensus 119 ~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e 198 (297)
.
T Consensus 446 -------------------------------------------------------------------------------~ 446 (527)
T 3pc3_A 446 -------------------------------------------------------------------------------N 446 (527)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCC---CCCeeEEeehHHHHHHHhhcc
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG---TPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~---~~~i~niITQSaVI~~L~~~~ 268 (297)
...+++|+++|.+. ++.|.+++++.+++.+|.++++ +||||.+ +|+++||||+.||++.|.+..
T Consensus 447 ~~~~~~V~~im~~~----~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 447 RQQSDPAIKALNKR----VIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp CCTTSBGGGGEETT----CCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CcCCCcHHHHhcCC----CeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 12357899999865 8999999999999999999887 6999974 379999999999999998865
No 54
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.44 E-value=5.1e-13 Score=118.43 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=101.6
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+..++++.+|+++|.++++...||+|.+ ++++|+|+..||+.+ . .
T Consensus 201 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~--------~~l~Giit~~dl~~~-------~-~-------------- 250 (330)
T 2v8q_E 201 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK--------GRVVDIYSKFDVINL-------A-A-------------- 250 (330)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT--------SBEEEEEEGGGTGGG-------G-G--------------
T ss_pred CCceEECCCCCHHHHHHHHHHcCCCeEEEECCC--------CcEEEEEEHHHHHHH-------H-h--------------
Confidence 578899999999999999999999999999965 489999999999872 0 0
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhcc-
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYR- 213 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~r- 213 (297)
+ . .+ ...+++|+++|...+
T Consensus 251 -------------------------------------~------------~----~~-------~~~~~~v~~~~~~~~~ 270 (330)
T 2v8q_E 251 -------------------------------------E------------K----TY-------NNLDVSVTKALQHRSH 270 (330)
T ss_dssp -------------------------------------S------------S----CC-------CCCSSBHHHHGGGCCS
T ss_pred -------------------------------------c------------c----cc-------ccccCcHHHHHhcccc
Confidence 0 0 00 012467888885211
Q ss_pred -CCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 214 -WAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 214 -waPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
-.|++.|.+++++.+++.+|.+++++++||+|. +|+++|+||+++|++.+.+..|.
T Consensus 271 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~l~Giit~~Dil~~~~~~~~~ 327 (330)
T 2v8q_E 271 YFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE-HDVVKGIVSLSDILQALVLTGGE 327 (330)
T ss_dssp CCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHSSCC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-CCcEEEEEeHHHHHHHHHhhccc
Confidence 246899999999999999999999999999997 46999999999999999887764
No 55
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.42 E-value=7.8e-13 Score=117.34 Aligned_cols=124 Identities=18% Similarity=0.248 Sum_probs=100.9
Q ss_pred hcCccccCCCCCCCCcEEecCCCCHHHHHHHHHHC-----CCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHH
Q 022419 42 ARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSEC-----NILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAE 116 (297)
Q Consensus 42 a~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLse~-----nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e 116 (297)
....+..+-. .+++.+.+++|+.+|++.|.++ ++...||+|.+ ++++|+|+..+++.
T Consensus 133 ~~~~v~~iM~---~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~--------~~lvGivt~~dll~------- 194 (278)
T 2yvy_A 133 EEDEAGGLMT---PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK--------GRLKGVLSLRDLIV------- 194 (278)
T ss_dssp CTTBGGGTCB---SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT--------CBEEEEEEHHHHHH-------
T ss_pred CcchHHhhcC---CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC--------CCEEEEEEHHHHhc-------
Confidence 3445555553 4789999999999999999997 89999999975 38999999999876
Q ss_pred HHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhh
Q 022419 117 LAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQ 196 (297)
Q Consensus 117 ~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~ 196 (297)
..
T Consensus 195 -~~----------------------------------------------------------------------------- 196 (278)
T 2yvy_A 195 -AD----------------------------------------------------------------------------- 196 (278)
T ss_dssp -SC-----------------------------------------------------------------------------
T ss_pred -CC-----------------------------------------------------------------------------
Confidence 10
Q ss_pred cCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCC
Q 022419 197 EEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 197 ~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~ 270 (297)
.+++|+++|... ++.|.+++++.+++.+|.+|+++.+||||. +|+++||||..+|++.+.+....
T Consensus 197 ----~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~~e~~e 261 (278)
T 2yvy_A 197 ----PRTRVAEIMNPK----VVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLEAEATE 261 (278)
T ss_dssp ----TTCBSTTTSBSS----CCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC------
T ss_pred ----CCCcHHHHhCCC----CeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHHHHhHH
Confidence 246789999654 889999999999999999999999999997 46999999999999998776543
No 56
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.38 E-value=2.1e-12 Score=116.07 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=48.8
Q ss_pred HhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 208 IIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 208 I~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+|+.. .+.|.++++|.++..||++.++|++||++ .|+++||||..++++.+++.
T Consensus 194 ~md~s----P~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~~ 247 (250)
T 2d4z_A 194 RIDQS----PFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEGS 247 (250)
T ss_dssp CEECC----SCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC-
T ss_pred cccCC----CeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHHH
Confidence 56766 78999999999999999999999999998 57999999999999999754
No 57
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.35 E-value=6.1e-13 Score=114.22 Aligned_cols=110 Identities=15% Similarity=0.249 Sum_probs=78.5
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.+|+++|.++++.+.||+|.+ ++++|+|+..||+..
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~--------~~~~Giv~~~dl~~~------------------------ 56 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNKE--------GKLVGIISVKRILVN------------------------ 56 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECTT--------CCEEEEEESSCC---------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC--------CcEEEEEEHHHHHhh------------------------
Confidence 467889999999999999999999999999964 389999999988751
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+ .+++|+++|...
T Consensus 57 ----------~-------------------------------------------------------~~~~v~~~m~~~-- 69 (282)
T 2yzq_A 57 ----------P-------------------------------------------------------DEEQLAMLVKRD-- 69 (282)
T ss_dssp ------------------------------------------------------------------------CCCBSC--
T ss_pred ----------h-------------------------------------------------------ccCCHHHHcCCC--
Confidence 0 135677888653
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH-HHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ-GLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~-~L~~ 266 (297)
++.+.+++++.+++.+|.+++++++||+|.+ |++.|+||++++++ .+.+
T Consensus 70 --~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 70 --VPVVKENDTLKKAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp --CCEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTT
T ss_pred --CcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhc
Confidence 7889999999999999999999999999974 69999999999999 7764
No 58
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.33 E-value=9.1e-14 Score=138.48 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=111.1
Q ss_pred HHHHHHhhccCCCCHHHHHHHHhhcCccccCCCCCCCCcEEecCCCCHHHHHHHHH-HCCCcccceecCCCCCCCccccc
Q 022419 19 YFEAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILS-ECNILSAPVKIPDAPSSSDWKER 97 (297)
Q Consensus 19 ~~~~~~~~~~~~~~~~e~Ln~~fa~IPVsSfP~~~~~~VIeI~~d~sI~dAvkiLs-e~nIlsAPV~D~da~~~~~w~dr 97 (297)
-||.+...|++|.-+...- .....++|..+-. |..+++.++.|+|+.|+.++|. ++++.+.||+|++ ++
T Consensus 429 iY~~~~~~k~lp~l~~~~~-~~~~~~~V~diM~-p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~--------~~ 498 (632)
T 3org_A 429 LYETLVLMKHLPYMPILRR-DRSPEMTAREIMH-PIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN--------GY 498 (632)
T ss_dssp HHHHHHHHTTCCEEEEECT-TCCTTSBHHHHCB-CTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT--------CB
T ss_pred HHHHHHHhcCCCccccccc-cccccCcHHHHhh-cCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC--------Ce
Confidence 3555555566553221100 0115677777654 2468899999999999999999 7999999999974 48
Q ss_pred eeEEEehHHHHHHHHHHHHHHHhhhccccccccccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCC
Q 022419 98 YLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGK 177 (297)
Q Consensus 98 yiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~ 177 (297)
++|+|+-.|+...+.+..+....+.+ .... +..
T Consensus 499 lvGiVt~~DL~~~l~~~~~~~~~~~~---------------~~~~--~~~------------------------------ 531 (632)
T 3org_A 499 LLGAISRKEIVDRLQHVLEDVPEPIA---------------GHRT--LVL------------------------------ 531 (632)
T ss_dssp BCCEESHHHHTTTTTTC---------------------------------------------------------------
T ss_pred EEEEEEHHHHHHHHHHHhhhcccccc---------------cccc--eec------------------------------
Confidence 99999999999854322111100000 0000 000
Q ss_pred CCcchhhhhhhhHHHHhhhc-----------------CC-CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCc
Q 022419 178 DAPTAADRLHEDFYKVILQE-----------------EP-FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLR 239 (297)
Q Consensus 178 ~~~~~~~~~~~df~~~L~~~-----------------e~-~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~ 239 (297)
....++.+.+.+. .. -...+|+++|++. .++|++|+++.+++.+|.++++|
T Consensus 532 -------~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~----pitV~~~~~l~ea~~~M~~~~i~ 600 (632)
T 3org_A 532 -------LDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVS----PIVVTSYSLVRQLHFLFVMLMPS 600 (632)
T ss_dssp ----------------------------------------------CCSCCCC----CCEEETTCBHHHHHHHHHHTCCS
T ss_pred -------cCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCC----CceecCCCcHHHHHHHHHhcCCC
Confidence 0000000000000 00 0122588999877 78999999999999999999999
Q ss_pred eeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 240 NVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 240 rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
++||+| +|+++||||++||++.+.+
T Consensus 601 ~lpVve--~G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 601 MIYVTE--RGKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp EEEEEE--TTEEEEEEEGGGTEECCCC
T ss_pred EEEEEE--CCEEEEEEehhhHHHHHhh
Confidence 999995 5799999999999876554
No 59
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.28 E-value=9.1e-12 Score=120.39 Aligned_cols=113 Identities=19% Similarity=0.294 Sum_probs=99.1
Q ss_pred CCcEEecCCCCHHHHHHHHHHC-----CCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSEC-----NILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATA 129 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~-----nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a 129 (297)
.+++.+++++|+.+|.+.+.++ ++...||+|.+ ++++|+|+..|++. +.
T Consensus 163 ~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~--------~~lvGiVt~~Dll~--------~~---------- 216 (473)
T 2zy9_A 163 PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK--------GRLKGVLSLRDLIV--------AD---------- 216 (473)
T ss_dssp SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT--------SBEEEEEEHHHHHH--------SC----------
T ss_pred CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC--------CcEEEEEEHHHHhc--------CC----------
Confidence 4799999999999999999996 68999999975 38999999999876 10
Q ss_pred cccccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHh
Q 022419 130 AGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSII 209 (297)
Q Consensus 130 ~g~g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~ 209 (297)
.+++|+++|
T Consensus 217 -----------------------------------------------------------------------~~~~v~dim 225 (473)
T 2zy9_A 217 -----------------------------------------------------------------------PRTRVAEIM 225 (473)
T ss_dssp -----------------------------------------------------------------------TTSBGGGTS
T ss_pred -----------------------------------------------------------------------CCCcHHHHh
Confidence 246799999
Q ss_pred hhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 210 KSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 210 ~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+.. ++.|.+++++.+++.+|.+|+++.+||||. +|+++|+||..||++.+.+...
T Consensus 226 ~~~----~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~i~~e~~ 280 (473)
T 2zy9_A 226 NPK----VVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLEAEAT 280 (473)
T ss_dssp BSS----CCCEESSSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHHHHH
T ss_pred CCC----CeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHHHHHHhh
Confidence 754 899999999999999999999999999997 4699999999999999877543
No 60
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.24 E-value=2.4e-11 Score=119.27 Aligned_cols=114 Identities=13% Similarity=0.266 Sum_probs=98.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.||.++|.++++.+.||+|... .++++|||+..|+.. .
T Consensus 121 ~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~------~~~lvGiVt~rDl~~--------~---------------- 170 (511)
T 3usb_A 121 SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLD------ERKLVGIITNRDMRF--------I---------------- 170 (511)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTT------TCBEEEEEEHHHHTT--------C----------------
T ss_pred cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCC------CCEEEEEEEehHhhh--------h----------------
Confidence 3568899999999999999999999999999720 048999999888743 1
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
.-.+++|+++|+.
T Consensus 171 ----------------------------------------------------------------~~~~~~V~~vM~~--- 183 (511)
T 3usb_A 171 ----------------------------------------------------------------QDYSIKISDVMTK--- 183 (511)
T ss_dssp ----------------------------------------------------------------CCSSSBHHHHCCC---
T ss_pred ----------------------------------------------------------------ccCCCcHHHhccc---
Confidence 0135789999986
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.|+++|..+.++.+++.+|.+++++++||||. +|+++|+||..++++.+..
T Consensus 184 ~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 184 EQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CCCCCEETTCCHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHC
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHHhhhc
Confidence 56899999999999999999999999999997 5799999999999999876
No 61
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.20 E-value=7.1e-11 Score=113.18 Aligned_cols=112 Identities=12% Similarity=0.265 Sum_probs=97.5
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceec--CCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKI--PDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGV 132 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D--~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~ 132 (297)
.+++.+++++|+.+|+++|.++++.+.||+| .+ ++++|+|+..|+... .
T Consensus 98 ~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~--------~~lvGivt~~Dl~~~-------~-------------- 148 (491)
T 1zfj_A 98 IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN--------RKLVGIITNRDMRFI-------S-------------- 148 (491)
T ss_dssp SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT--------CBEEEEEEHHHHHHC-------S--------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC--------CEEEEEEEHHHHhhh-------c--------------
Confidence 4678899999999999999999999999998 43 489999999998651 0
Q ss_pred ccccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhc
Q 022419 133 GTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSY 212 (297)
Q Consensus 133 g~~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~ 212 (297)
+ .+++|+++|+.
T Consensus 149 -----------------------------------------------------------------~--~~~~v~~im~~- 160 (491)
T 1zfj_A 149 -----------------------------------------------------------------D--YNAPISEHMTS- 160 (491)
T ss_dssp -----------------------------------------------------------------C--SSSBTTTSCCC-
T ss_pred -----------------------------------------------------------------c--CCCcHHHHcCC-
Confidence 0 24678899975
Q ss_pred cCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 213 RWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 213 rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.|++.|.+++++.+++.+|.+++++++||||. +|+++|+||+.+|++.+..
T Consensus 161 --~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 161 --EHLVTAAVGTDLETAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp --SCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHHC
T ss_pred --CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHhc
Confidence 25889999999999999999999999999997 5799999999999999985
No 62
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.10 E-value=2.9e-11 Score=118.31 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=84.9
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+++++|+.||.++|.++++.+.||+|.+ ++++|||+..|+.. .
T Consensus 97 ~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~--------~~lvGiVt~rDL~~--------~---------------- 144 (496)
T 4fxs_A 97 THPVTVRPEQTIADVMELTHYHGFAGFPVVTEN--------NELVGIITGRDVRF--------V---------------- 144 (496)
T ss_dssp BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS--------SBEEEEEEHHHHTT--------C----------------
T ss_pred cCceEECCCCCHHHHHHHHHHcCCcEEEEEccC--------CEEEEEEEHHHHhh--------c----------------
Confidence 466889999999999999999999999999975 49999999998752 1
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
.-.+++|+++|+. .
T Consensus 145 ----------------------------------------------------------------~~~~~~v~diM~p--~ 158 (496)
T 4fxs_A 145 ----------------------------------------------------------------TDLTKSVAAVMTP--K 158 (496)
T ss_dssp ----------------------------------------------------------------CCTTSBGGGTSEE--G
T ss_pred ----------------------------------------------------------------ccCCCcHHHHhcC--C
Confidence 0135779999973 1
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
+|++.+..+.++.+++.+|.+|+++.+||||. +|+++|+||..+|++...
T Consensus 159 ~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 159 ERLATVKEGATGAEVQEKMHKARVEKILVVND-EFQLKGMITAKDFHKAES 208 (496)
T ss_dssp GGCCEEECC----CGGGTCC---CCCEEEECT-TSBCCEEECCC-----CC
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHHHhhc
Confidence 35789999999999999999999999999997 579999999999998754
No 63
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.09 E-value=9.9e-12 Score=119.59 Aligned_cols=114 Identities=17% Similarity=0.306 Sum_probs=6.4
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.||+++|.++++.+.||+|.+ ++++|+|+..||.. ..
T Consensus 103 ~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--------~~lvGivt~~Dl~~--------~~--------------- 151 (494)
T 1vrd_A 103 YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE--------GRLVGLLTNRDVRF--------EK--------------- 151 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC--------CEEEEEEEHHHHHh--------hc---------------
Confidence 478899999999999999999999999999975 38999999998864 10
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+ .+++|+++|+. .
T Consensus 152 ---------------------------------------------------------------~--~~~~v~~im~~--~ 164 (494)
T 1vrd_A 152 ---------------------------------------------------------------N--LSKKIKDLMTP--R 164 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------C--CCCcHHHHhCC--C
Confidence 0 23568899986 1
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+++.|.+++++.+++.+|.+++++++||||. +|+++|+||+.++++.+...
T Consensus 165 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 165 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ---------------------------------------------CHHHHTCT
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhccc
Confidence 24899999999999999999999999999997 57999999999999998754
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.00 E-value=4e-11 Score=117.02 Aligned_cols=111 Identities=13% Similarity=0.178 Sum_probs=0.0
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.||.++|.++++...||+| + ++++|||+..|+... .
T Consensus 96 ~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~--------g~lvGIVt~rDl~~~-------~---------------- 143 (490)
T 4avf_A 96 RDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q--------GELVGIVTGRDLRVK-------P---------------- 143 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C--------CEEEEEEEhHHhhhc-------c----------------
Confidence 3568999999999999999999999999999 3 389999999887431 0
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
-.+++|+++|+. .
T Consensus 144 -----------------------------------------------------------------~~~~~V~~vMtp--~ 156 (490)
T 4avf_A 144 -----------------------------------------------------------------NAGDTVAAIMTP--K 156 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------ccCCcHHHHhcc--C
Confidence 024678999973 1
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
.|++++..+.++.+++.+|.+++++.+||||. +|+++|+||..++++...
T Consensus 157 ~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 157 DKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------------------
T ss_pred CCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhhhcc
Confidence 24799999999999999999999999999997 579999999999999764
No 65
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.99 E-value=4.5e-11 Score=116.52 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=0.9
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhccccccccccccc
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTG 135 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~ 135 (297)
+++.+.+++|+.||.++|.++++...||+|.+.. .++++|||+..||... ..
T Consensus 106 ~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~-----~g~lvGiVt~~Dl~~~-------~~---------------- 157 (503)
T 1me8_A 106 SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTP-----HGVLLGLVTQRDYPID-------LT---------------- 157 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCc-----CCeEEEEEEHHHHHhh-------hc----------------
Confidence 6789999999999999999999999999987410 1389999999998652 00
Q ss_pred cccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccCC
Q 022419 136 TVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWA 215 (297)
Q Consensus 136 a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rwa 215 (297)
..+++|+++|+.. .
T Consensus 158 ----------------------------------------------------------------~~~~~V~diM~~~--~ 171 (503)
T 1me8_A 158 ----------------------------------------------------------------QTETKVSDMMTPF--S 171 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------cccCcHHHHhCCC--C
Confidence 0246799999742 2
Q ss_pred CceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 216 PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 216 PFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
+++.|.++.++.+++.+|.+++++++||||. +|+++||||..||++.+....
T Consensus 172 ~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 172 KLVTAHQDTKLSEANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp ---------------------------------------------------CC
T ss_pred CCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhhccc
Confidence 3688999999999999999999999999997 479999999999999887544
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.89 E-value=1.7e-10 Score=115.74 Aligned_cols=110 Identities=15% Similarity=0.321 Sum_probs=0.0
Q ss_pred cEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccccc
Q 022419 57 VIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGT 136 (297)
Q Consensus 57 VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~~a 136 (297)
.|+|.+|.||.||.+++.+++|.+.||+|...+ .+|++|||+-.|+-. .
T Consensus 148 Pvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~-----~~kLvGIvT~RD~rf--------~------------------ 196 (556)
T 4af0_A 148 PLCLGPDATVGDVLEIKAKFGFCGVPITETGEP-----DSKLLGIVTGRDVQF--------Q------------------ 196 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEcCCCCCHHHHHHHHHHhCCCccccccccCc-----CCEEEEEEecccccc--------c------------------
Confidence 578999999999999999999999999987422 258999998877522 0
Q ss_pred ccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccCCC
Q 022419 137 VGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAP 216 (297)
Q Consensus 137 ~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rwaP 216 (297)
+ .+++|+++|++.
T Consensus 197 -------------------------------------------------------------d--~~~~V~evMT~~---- 209 (556)
T 4af0_A 197 -------------------------------------------------------------D--AETPIKSVMTTE---- 209 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------c--cceEhhhhcccc----
Confidence 0 257899999975
Q ss_pred ceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 217 FLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 217 FlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
++++..+.++.++..+|.+||+..+||||. +++++|+||..|+++.-.
T Consensus 210 lvt~~~~~~leeA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 210 VVTGSSPITLEKANSLLRETKKGKLPIVDS-NGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -------------------------------------------------
T ss_pred eEEecCCCCHHHHHHHHHHccccceeEEcc-CCcEEEEEEechhhhhhh
Confidence 999999999999999999999999999998 579999999999987553
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.86 E-value=4.8e-11 Score=115.77 Aligned_cols=118 Identities=12% Similarity=0.190 Sum_probs=64.0
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.||.++|.++++.+.||+|.+.. .+|++|+|+..|+.. ..
T Consensus 116 ~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-----~~~lvGiVt~~Dl~~--------~~--------------- 167 (514)
T 1jcn_A 116 TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTM-----GSKLVGIVTSRDIDF--------LA--------------- 167 (514)
T ss_dssp SSCCCCCC-----------------CEESCC-------------CCEECTTTTC--------------------------
T ss_pred cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCc-----CCEEEEEEEHHHHHh--------hh---------------
Confidence 46788999999999999999999999999997310 038999998888754 10
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
+...+++|+++|.. .
T Consensus 168 ---------------------------------------------------------------~~~~~~~v~~vm~~--~ 182 (514)
T 1jcn_A 168 ---------------------------------------------------------------EKDHTTLLSEVMTP--R 182 (514)
T ss_dssp ----------------------------------------------------------------------------C--C
T ss_pred ---------------------------------------------------------------hccCCCCHHHHhCC--C
Confidence 00134678999985 2
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.++++|.+++++.+++.+|.+++++++||||. +|+++|+||++++++.+..
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVND-CDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-SSCCC----CCCCSSCCCC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHHHHhhC
Confidence 35899999999999999999999999999996 5799999999999987754
No 68
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.78 E-value=6.4e-10 Score=107.55 Aligned_cols=107 Identities=20% Similarity=0.318 Sum_probs=0.6
Q ss_pred CCcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHHHHHHHHHhhhcccccccccccc
Q 022419 55 GRVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGT 134 (297)
Q Consensus 55 ~~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvLe~~e~a~~~~~~~~~~a~g~g~ 134 (297)
.+++.+.+++|+.++.++|.++++...||+|.+ +++|+|+..|+.. .
T Consensus 101 ~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~---------~lvGivt~~Dl~~--------~---------------- 147 (486)
T 2cu0_A 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE---------KVVGIITKKDIAA--------R---------------- 147 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEECCCCCHHHHHHHHHHcCCcEEEEEECC---------EEEEEEEHHHhcc--------C----------------
Confidence 578899999999999999999999999999863 8999998888653 1
Q ss_pred ccccchhhhhhccCCcchhhhhhHHhhhhhhhccchhcccCCCCCcchhhhhhhhHHHHhhhcCCCCccchhhHhhhccC
Q 022419 135 GTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRW 214 (297)
Q Consensus 135 ~a~~~~~a~al~~~~P~~~~~~~~~a~~aa~~~~~~~d~~~~~~~~~~~~~~~~df~~~L~~~e~~k~tkV~dI~~s~rw 214 (297)
.+.+|+++|..
T Consensus 148 ------------------------------------------------------------------~~~~v~~im~~--- 158 (486)
T 2cu0_A 148 ------------------------------------------------------------------EGKLVKELMTK--- 158 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------CCCCHHHHccC---
Confidence 12458888875
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
|++.|.+++++.+++.+|.+++++.+||||. +|+++|+||..+|++.+.
T Consensus 159 -~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 159 -EVITVPESIEVEEALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------C
T ss_pred -CCeEECCcCcHHHHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHHhhh
Confidence 4789999999999999999999999999997 469999999999999876
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.77 E-value=8.4e-09 Score=76.17 Aligned_cols=45 Identities=31% Similarity=0.311 Sum_probs=42.7
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHH
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIIL 109 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~ 109 (297)
|+|.+.+|+|+.||+++|.+|||.+.||.|.+ +++|||+..||+.
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~---------~lvGIvT~~Di~~ 45 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGD---------EILGVVTERDILD 45 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETT---------EEEEEEEHHHHHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEECC---------EEEEEEEHHHHHH
Confidence 57999999999999999999999999999865 8999999999987
No 70
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.75 E-value=3.8e-09 Score=86.01 Aligned_cols=60 Identities=20% Similarity=0.360 Sum_probs=54.7
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
.+.+|+|||++. +++|.+++|+.+++.+|.+++++++||+|. +|+++|+||..++++.+.
T Consensus 16 ~~~~V~diM~~~----v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 16 RQVPIRDILTSP----VVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSI 75 (170)
T ss_dssp HTSBGGGGCCSC----CCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTC
T ss_pred cCCCHHHhcCCC----CcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHh
Confidence 578999999875 999999999999999999999999999997 579999999999987654
No 71
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.71 E-value=2.6e-08 Score=78.70 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=59.9
Q ss_pred hhhcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 194 L~~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+.+--.+.+.+|++||.. +.+++.+.+++|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+.+.
T Consensus 14 i~~~~~l~~~~v~diM~~--~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 14 VDNIFEFEEKKIREIMVP--RTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp ----CGGGTCBGGGTSEE--TTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred HHHHhccCCCCHHHcccc--HHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 333355788999999976 234899999999999999999999999999997547999999999999988654
No 72
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.71 E-value=2.4e-08 Score=78.59 Aligned_cols=81 Identities=17% Similarity=0.401 Sum_probs=66.0
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhhhhccc
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 279 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~~i~~K 279 (297)
+.+.+|+++|... .++++|.+++|+.+++.+|.+++++++||+|. +|+++|+||..++++.+....+.+ ++.+...
T Consensus 12 l~~~~v~~im~~~--~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~-~~~~~~~ 87 (150)
T 3lqn_A 12 FQQIFVKDLMISS--EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLERIE-FERLEEM 87 (150)
T ss_dssp HHHCBHHHHSEEG--GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSSSBC-GGGGGGC
T ss_pred hhcCChhhcccCC--CceEEECCCCcHHHHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhcccc-hhHHhcC
Confidence 4678999999842 23899999999999999999999999999997 469999999999999997655432 2344566
Q ss_pred ccccc
Q 022419 280 PISDL 284 (297)
Q Consensus 280 ~lsel 284 (297)
+++++
T Consensus 88 ~v~~~ 92 (150)
T 3lqn_A 88 KVEQV 92 (150)
T ss_dssp BGGGT
T ss_pred CHHHH
Confidence 67665
No 73
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.66 E-value=4.9e-08 Score=77.52 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=62.7
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhhhhcccc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQP 280 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~~i~~K~ 280 (297)
...+|+++|... .+++.|.+++|+.+++.+|.+++++++||+|. +|+++|+||..++++.+....-. .+.+...+
T Consensus 13 ~~~~v~dim~p~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~--~~~~~~~~ 87 (156)
T 3ctu_A 13 LLGQEETFLTPA--KNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLS--QEIMADTD 87 (156)
T ss_dssp HHTTGGGGEEEG--GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC--HHHHTTSB
T ss_pred HHHHHHHHcCcc--cCceEECCCCCHHHHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhcccc--ccccccCc
Confidence 467899999832 23889999999999999999999999999997 47999999999999998864322 23344556
Q ss_pred cccc
Q 022419 281 ISDL 284 (297)
Q Consensus 281 lsel 284 (297)
++++
T Consensus 88 v~~~ 91 (156)
T 3ctu_A 88 IVHM 91 (156)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 6654
No 74
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.66 E-value=6.7e-08 Score=71.30 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=43.5
Q ss_pred ceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 217 FLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 217 FlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.+.|++++|+.+++.+|.+|+++.+||+| +|+++||||..|+++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 47899999999999999999999999999 4699999999999976543
No 75
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.65 E-value=7.3e-08 Score=78.90 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=63.5
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhhhhccccc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPI 281 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~~i~~K~l 281 (297)
..+++++|... ..+..|.+++|+.+|+.+|.+++.+++||+|. +++++|+||..++++.+...... .+.+...++
T Consensus 14 ~~~~~~iM~P~--~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~~--~~~~~~~~v 88 (156)
T 3k6e_A 14 LGQEETFLTPA--KNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLS--QEIMADTDI 88 (156)
T ss_dssp HTTGGGGEEET--TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC--HHHHTTSBG
T ss_pred hccHHHhCcch--hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhcccc--cccccccCH
Confidence 46799999742 34889999999999999999999999999996 47999999999999988776544 445556666
Q ss_pred ccc
Q 022419 282 SDL 284 (297)
Q Consensus 282 sel 284 (297)
+++
T Consensus 89 ~~i 91 (156)
T 3k6e_A 89 VHM 91 (156)
T ss_dssp GGT
T ss_pred HHh
Confidence 664
No 76
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.65 E-value=4.1e-08 Score=78.42 Aligned_cols=82 Identities=15% Similarity=0.300 Sum_probs=64.1
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhhhhcc
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIAS 278 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~~i~~ 278 (297)
.+.+.+|+++|.. +.++++|.+++++.+++.+|.+++++++||+|. +|+++|+||..++++.+....+. .++.+..
T Consensus 10 ~l~~~~v~~im~~--~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~-~~~~~~~ 85 (159)
T 1yav_A 10 QLLEATVGQFMIE--ADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLERI-EFEKLDQ 85 (159)
T ss_dssp -CTTCBHHHHSEE--GGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSSSB-CGGGTTT
T ss_pred HHhHhhHHHHhCC--ccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhccc-chhhhcc
Confidence 4567999999976 123899999999999999999999999999997 46999999999999988764322 2333445
Q ss_pred cccccc
Q 022419 279 QPISDL 284 (297)
Q Consensus 279 K~lsel 284 (297)
++++++
T Consensus 86 ~~v~~~ 91 (159)
T 1yav_A 86 ITVEEV 91 (159)
T ss_dssp SBHHHH
T ss_pred CCHHHh
Confidence 555553
No 77
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.62 E-value=1.2e-07 Score=66.36 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=46.1
Q ss_pred CceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 216 PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 216 PFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
|.+.+.+++++.+++.+|.+++++++||+|. +++.|+||..++++.+...
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHc
Confidence 5788999999999999999999999999995 6999999999999988654
No 78
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.61 E-value=1.9e-07 Score=75.44 Aligned_cols=69 Identities=14% Similarity=0.112 Sum_probs=60.1
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
......+|++||... -.+++.|.+++++.+++.+|.+++++.+||+|. +|+++|+||..++++.+....
T Consensus 19 ~~l~~~~v~dim~~~-~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~ 87 (165)
T 3fhm_A 19 FQGMATFVKDLLDRK-GRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQG 87 (165)
T ss_dssp CSSSSCBHHHHHHHH-CSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHG
T ss_pred HhhhhcCHHHHhccC-CCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcC
Confidence 557789999999862 124789999999999999999999999999996 469999999999999987653
No 79
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.59 E-value=1e-07 Score=72.05 Aligned_cols=60 Identities=18% Similarity=0.294 Sum_probs=54.9
Q ss_pred cchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 203 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 203 tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
++|+++|... ++++.+++++.+++.+|.+++.+.+||+|. +|++.|+||..++++.+.+.
T Consensus 1 ~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~ 60 (122)
T 3kpb_A 1 TLVKDILSKP----PITAHSNISIMEAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQN 60 (122)
T ss_dssp CBHHHHCCSC----CCCEETTSBHHHHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTT
T ss_pred CchHHhhCCC----CEEeCCCCcHHHHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhc
Confidence 5799999875 899999999999999999999999999996 46999999999999988764
No 80
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.59 E-value=8.5e-08 Score=75.76 Aligned_cols=83 Identities=14% Similarity=0.334 Sum_probs=62.6
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccCCchhhhhc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIA 277 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g~dwf~~i~ 277 (297)
+.+.+.+|+++|.. +.+++++.++.|+.+++.+|.+++++++||+|. +|+++|+||..++++.+......+ ++.+.
T Consensus 6 ~~l~~~~v~~im~~--~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~-~~~~~ 81 (157)
T 2emq_A 6 NEFMQMTVKPFLIP--ADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILGLERIE-FERLE 81 (157)
T ss_dssp ----CCBSTTTCEE--GGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBCSSSBC-GGGGG
T ss_pred hhHhhCcHHhhccC--CccceEECCCCcHHHHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhcccccc-hHHhc
Confidence 44678999999975 124889999999999999999999999999997 469999999999999887532211 12344
Q ss_pred ccccccc
Q 022419 278 SQPISDL 284 (297)
Q Consensus 278 ~K~lsel 284 (297)
..+++++
T Consensus 82 ~~~v~~~ 88 (157)
T 2emq_A 82 TMKVEEV 88 (157)
T ss_dssp TCBGGGT
T ss_pred CCcHHHH
Confidence 5566664
No 81
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.58 E-value=9e-08 Score=77.34 Aligned_cols=70 Identities=16% Similarity=0.285 Sum_probs=59.4
Q ss_pred CCCCccchhhHhhhccCCCceEe--cCCCCHHHHHHHHhhcCCceeEEEc-CCCCCeeEEeehHHHHHHHhhc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPV--ATDDSMLSVLLLLSKYRLRNVPIIE-PGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV--~~~~sll~vllLLsK~rl~rvPVVd-~~~~~i~niITQSaVI~~L~~~ 267 (297)
+...+.+|++||......|+++| .+++++.+++.+|.+++++++||+| .++|+++|+||..++++.+...
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~ 78 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENA 78 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 34578999999987766678888 9999999999999999999999994 2367999999999999998764
No 82
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.57 E-value=8.8e-08 Score=82.20 Aligned_cols=63 Identities=11% Similarity=0.193 Sum_probs=56.9
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
.+++|++||... ++.+.+++++.+++.+|.+++++++||+|. +|+++||||..++++.+....
T Consensus 5 ~~~~v~~im~~~----~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~ 67 (245)
T 3l2b_A 5 VKLKVEDLEMDK----IAPLAPEVSLKMAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIW 67 (245)
T ss_dssp CCCBGGGSCCBC----CCCBCTTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCC
T ss_pred ccCcHHHhcCCC----CcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhh
Confidence 368999999765 899999999999999999999999999997 479999999999999987654
No 83
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.55 E-value=1.6e-07 Score=74.31 Aligned_cols=64 Identities=14% Similarity=0.273 Sum_probs=56.9
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcC-CCCCeeEEeehHHHHHHHhhc
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEP-GTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~-~~~~i~niITQSaVI~~L~~~ 267 (297)
..+.+|+++|... ++.+.+++|+.+++.+|.+++++.+||+|. ++++++|+||..++++.+...
T Consensus 10 ~~~~~v~dim~~~----~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~ 74 (164)
T 2pfi_A 10 SHHVRVEHFMNHS----ITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAE 74 (164)
T ss_dssp CCSCBHHHHCBCC----CCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-
T ss_pred ccCCCHHHHcCCC----CeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhh
Confidence 4578999999874 889999999999999999999999999996 357999999999999988653
No 84
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.55 E-value=1.8e-07 Score=71.93 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=55.4
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+.+|+++|... ++++.+++++.+++.+|.+++.+.+||+| +|+++|+||..++++.+.+.
T Consensus 2 ~~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~ 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQ----VISVTKDAKLNDIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKG 62 (133)
T ss_dssp CCCBGGGTSBCS----CCEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTT
T ss_pred CcccHHHhccCC----CEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcC
Confidence 467899999874 89999999999999999999999999999 56999999999999988764
No 85
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.54 E-value=8.5e-08 Score=74.39 Aligned_cols=66 Identities=6% Similarity=0.061 Sum_probs=55.2
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+.+.+|++||... .+++.+.+++|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+.+.
T Consensus 3 l~~~~v~~iM~~~--~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~ 68 (130)
T 3i8n_A 3 AQDVPVTQVMTPR--PVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG 68 (130)
T ss_dssp ----CCTTTSCCB--CCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT
T ss_pred cCcCCHhhCCCcH--HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC
Confidence 4678899999743 34778999999999999999999999999997547999999999999988764
No 86
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.53 E-value=1.6e-07 Score=72.50 Aligned_cols=63 Identities=11% Similarity=0.360 Sum_probs=56.0
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHH-HHHHhh
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV-VQGLEG 266 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaV-I~~L~~ 266 (297)
.+.+.+|+++|... ++++.+++++.+++.+|.+++.+.+||+|.+ ++++|+||..++ ++.+.+
T Consensus 4 ~l~~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~ 67 (138)
T 2p9m_A 4 TLKNIKVKDVMTKN----VITAKRHEGVVEAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRD 67 (138)
T ss_dssp -CTTCBGGGTSBCS----CCCEETTSBHHHHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTT
T ss_pred ccccCCHHHhhcCC----ceEECCCCcHHHHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhh
Confidence 35688999999764 8999999999999999999999999999974 699999999999 887764
No 87
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.52 E-value=1.9e-07 Score=73.06 Aligned_cols=64 Identities=9% Similarity=0.107 Sum_probs=55.5
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+.+|++||... .+++.+.+++|+.+++.+|.+++.+++||+|.++++++|+||..++++.+.+.
T Consensus 1 ~~~v~~iM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~ 64 (130)
T 3hf7_A 1 KVSVNDIMVPR--NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK 64 (130)
T ss_dssp CCBHHHHSEEG--GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS
T ss_pred CcCHHHhCccH--HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc
Confidence 35799999632 23789999999999999999999999999986567999999999999998764
No 88
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.52 E-value=9e-08 Score=74.37 Aligned_cols=64 Identities=11% Similarity=0.127 Sum_probs=54.8
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
+.+.+|++||... .+++.+.++.|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+.
T Consensus 2 ~~~~~v~diM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 2 NAERTVADIMVPR--SRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML 65 (129)
T ss_dssp --CCBHHHHCEEG--GGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT
T ss_pred CCCCCHHHhCccH--HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc
Confidence 3578899999832 237899999999999999999999999999975479999999999998775
No 89
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.52 E-value=1.1e-07 Score=73.56 Aligned_cols=64 Identities=11% Similarity=0.218 Sum_probs=54.7
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+.+|++||... .+++.+.+++|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+...
T Consensus 2 ~~~v~diM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~ 65 (127)
T 3nqr_A 2 DQRVRDIMIPR--SQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD 65 (127)
T ss_dssp -CBHHHHSEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT
T ss_pred CcCHHHhcccH--HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc
Confidence 46899999742 23789999999999999999999999999997547999999999999887643
No 90
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.51 E-value=2.1e-07 Score=72.66 Aligned_cols=61 Identities=8% Similarity=0.108 Sum_probs=54.5
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCC--CeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTP--DIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~--~i~niITQSaVI~~L~~~ 267 (297)
+.+|+++|... ++++.+++|+.+++.+|.+++.+++||+|. ++ +++|+||..++++.+.+.
T Consensus 4 ~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~ 66 (141)
T 2rih_A 4 AIRTSELLKRP----PVSLPETATIREVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQR 66 (141)
T ss_dssp -CBGGGGCCSC----CEEEETTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTT
T ss_pred ceEHHHHhcCC----CeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcC
Confidence 47899999864 899999999999999999999999999996 45 899999999999988653
No 91
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.51 E-value=1.8e-07 Score=75.30 Aligned_cols=63 Identities=13% Similarity=0.235 Sum_probs=56.7
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
.+.+|++||... +++|.+++|+.+++.+|.+++++++||+|. +|+++|+||..++++.+....
T Consensus 3 ~~~~v~dim~~~----~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~ 65 (160)
T 2o16_A 3 LMIKVEDMMTRH----PHTLLRTHTLNDAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSL 65 (160)
T ss_dssp CCCBGGGTSEES----CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHC
T ss_pred CcCcHHHHhcCC----CeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhh
Confidence 467899999864 899999999999999999999999999996 469999999999999987654
No 92
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.49 E-value=3.9e-07 Score=70.46 Aligned_cols=60 Identities=10% Similarity=0.256 Sum_probs=52.0
Q ss_pred cchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 203 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 203 tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
++|++||.. ++.+++++.+++++.+++.+|.+++.+.+||+| +|+++|+||..++++.+.
T Consensus 6 ~~v~~im~~-~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~ 65 (135)
T 2rc3_A 6 KTVKHLLQE-KGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSY 65 (135)
T ss_dssp CBHHHHHHH-HCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGG
T ss_pred eeHHHHHhc-CCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHH
Confidence 489999982 123489999999999999999999999999999 569999999999997544
No 93
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.49 E-value=1.7e-07 Score=84.24 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=58.5
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCC-CCCeeEEeehHHHHHHHhhc
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG-TPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~-~~~i~niITQSaVI~~L~~~ 267 (297)
...+.+|+|||.+. +++|.+++++.++..+|.+++++.+||||.+ +++++||||++++++.|...
T Consensus 9 ~~~~~~v~diMt~~----vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 9 NKYNIQVGDIMVRD----VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp CCSSCBTTSSSBSS----CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred ccCCCChHHhcCCC----CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 35678999999876 9999999999999999999999999999975 36899999999999988755
No 94
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.49 E-value=1.2e-07 Score=74.38 Aligned_cols=63 Identities=11% Similarity=0.163 Sum_probs=54.5
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
+.+|++||... .+++.+.++.|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+.+
T Consensus 2 ~~~v~~iM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~ 64 (136)
T 3lfr_A 2 DLQVRDIMVPR--SQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK 64 (136)
T ss_dssp -CBHHHHSEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS
T ss_pred CCChHhccccH--HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh
Confidence 46899999732 3389999999999999999999999999999754799999999999988763
No 95
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.48 E-value=1.9e-07 Score=72.07 Aligned_cols=61 Identities=13% Similarity=0.159 Sum_probs=55.3
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+.+|+++|... +.++.+++++.+++.+|.+++.+.+||+|. +++.|+||..++++.+.+.
T Consensus 3 ~s~~v~~~m~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~ 63 (128)
T 3gby_A 3 ASVTFSYLAETD----YPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGW 63 (128)
T ss_dssp TTCBGGGGCBCC----SCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSS
T ss_pred cceEHHHhhcCC----cceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhC
Confidence 467899999887 899999999999999999999999999996 6999999999999876543
No 96
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.47 E-value=2.3e-07 Score=73.56 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=55.8
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.++|+++|.. +.+++.+.+++|+.+++.+|.+++++.+||+|.+ |+++|+||..++++.+.+.
T Consensus 27 ~~~v~dim~~--~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~ 89 (149)
T 3k2v_A 27 LLRVNDIMHT--GDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTG 89 (149)
T ss_dssp TSBGGGTSBC--GGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSS
T ss_pred ccCHHHHhcC--CCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcC
Confidence 4689999976 2238999999999999999999999999999974 6999999999999988763
No 97
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.47 E-value=9.3e-08 Score=76.30 Aligned_cols=66 Identities=14% Similarity=0.229 Sum_probs=57.1
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEE-cCCCCCeeEEeehHHHHHHHhhc
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPII-EPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVV-d~~~~~i~niITQSaVI~~L~~~ 267 (297)
+.+.+|++||... .+++.+.++.|+.+++.+|.+++.+++||+ |.++++++|+||..++++.+...
T Consensus 17 l~~~~v~~iM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~ 83 (153)
T 3oco_A 17 MNDKVASDVMVDR--TSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID 83 (153)
T ss_dssp HHHCBHHHHSEEG--GGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH
T ss_pred cCCCEeeeEecch--hheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC
Confidence 4678999999741 237899999999999999999999999999 65457999999999999988754
No 98
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.47 E-value=2.1e-07 Score=76.15 Aligned_cols=70 Identities=9% Similarity=0.078 Sum_probs=54.9
Q ss_pred hcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 196 QEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 196 ~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+--.+.+.+|++||... .+++++.+++|+.+++.+|.+++.+++||+|.+.++++|+||..++++.+.+.
T Consensus 35 ~~~~l~~~~v~diM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 104 (172)
T 3lhh_A 35 NVFRLDERTISSLMVPR--SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG 104 (172)
T ss_dssp --------CTTTTSEEG--GGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT
T ss_pred HHhccCCCCHHHhCccH--HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc
Confidence 33457889999999832 23889999999999999999999999999997537999999999999988754
No 99
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.47 E-value=3.1e-07 Score=71.08 Aligned_cols=62 Identities=11% Similarity=0.236 Sum_probs=54.6
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH-HHh
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ-GLE 265 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~-~L~ 265 (297)
.+.+.+|+++|.+. ++++.+++++.+++.+|.+++.+.+||+|. +|+++|+||..++++ .+.
T Consensus 3 ~l~~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~ 65 (138)
T 2yzi_A 3 MDMKAPIKVYMTKK----LLGVKPSTSVQEASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVIV 65 (138)
T ss_dssp CCTTSBGGGTCBCC----CCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTT
T ss_pred chhhhhHHHHhcCC----CeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHh
Confidence 35678999999854 899999999999999999999999999996 469999999999984 443
No 100
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.46 E-value=2.5e-07 Score=69.98 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=52.9
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
+|+++|... ++++.+++++.+++.+|.+++.+.+||+| +|+++|+||..++++.+.+.
T Consensus 2 ~v~~~m~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~ 59 (125)
T 1pbj_A 2 RVEDVMVTD----VDTIDITASLEDVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEG 59 (125)
T ss_dssp CHHHHCBCS----CCEEETTCBHHHHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHT
T ss_pred CHHHhcCCC----ceEECCCCcHHHHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcC
Confidence 688999764 89999999999999999999999999999 57999999999999988764
No 101
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.43 E-value=5e-07 Score=72.48 Aligned_cols=61 Identities=8% Similarity=0.182 Sum_probs=54.1
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
+...+|+++|.. |+ +|.+++++.+++.+|.+++.+.+||+|.+ |+++|+||..++++.+..
T Consensus 14 l~~~~v~~im~~----~~-~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~ 74 (159)
T 3fv6_A 14 LKKLQVKDFQSI----PV-VIHENVSVYDAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIG 74 (159)
T ss_dssp HTTCBGGGSCBC----CC-EEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTS
T ss_pred HhhCCHHHHcCC----CE-EECCCCcHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhc
Confidence 367899999973 45 99999999999999999999999999974 699999999999998744
No 102
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.42 E-value=2.8e-07 Score=71.12 Aligned_cols=64 Identities=19% Similarity=0.301 Sum_probs=55.6
Q ss_pred CCCccchhh---HhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 199 PFKSTTVRS---IIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 199 ~~k~tkV~d---I~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+.+.+|++ +|. .+++++.+++++.+++.+|.+++.+++||+|.+ ++++|+||..++++.+.+.
T Consensus 4 ~~~~~~v~~~~~~~~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~ 70 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ----DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGG 70 (144)
T ss_dssp GGGGSBGGGSSCCBC----SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC
T ss_pred chhhcchhhcCCCCC----CCceEECCCCcHHHHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhccc
Confidence 355778888 554 458999999999999999999999999999974 6999999999999988764
No 103
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.42 E-value=1.9e-07 Score=72.53 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=54.4
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhccC
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG 269 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~g 269 (297)
+..+|+++|... .++++|.+++++.+++.+|.+++.+.+||+|.+ ++++|+||..++++.+....+
T Consensus 3 ~~~~v~~im~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~ 68 (152)
T 4gqw_A 3 GVYTVGEFMTKK--EDLHVVKPTTTVDEALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDST 68 (152)
T ss_dssp CCSBGGGTSEES--TTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----C
T ss_pred ceEEhhhccCCC--CCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCc
Confidence 467899999762 348999999999999999999999999999974 699999999999876654433
No 104
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.41 E-value=1.8e-07 Score=72.00 Aligned_cols=64 Identities=20% Similarity=0.395 Sum_probs=53.0
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHH-HHHhh
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVV-QGLEG 266 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI-~~L~~ 266 (297)
+.++..+|+++|... ++++.+++++.+++.+|.+++.+++||+|. ++++.|+||..+++ +.+.+
T Consensus 3 d~~~~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~ 67 (133)
T 1y5h_A 3 DPFTMTTARDIMNAG----VTCVGEHETLTAAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAA 67 (133)
T ss_dssp -----CCHHHHSEET----CCCEETTSBHHHHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGG
T ss_pred ChhhhcCHHHHhcCC----ceEeCCCCCHHHHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhc
Confidence 345678999999864 889999999999999999999999999986 46999999999999 46654
No 105
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.39 E-value=5.5e-07 Score=71.51 Aligned_cols=65 Identities=18% Similarity=0.251 Sum_probs=56.0
Q ss_pred ccchhhHhhhcc--CCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhcc
Q 022419 202 STTVRSIIKSYR--WAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK 268 (297)
Q Consensus 202 ~tkV~dI~~s~r--waPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~~ 268 (297)
.++|++||.... ..+++.|.+++|+.+++.+|.+++.+.+||+| +++++|+||..++++.+....
T Consensus 6 ~~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~ 72 (157)
T 4fry_A 6 STTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQE 72 (157)
T ss_dssp -CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGT
T ss_pred HHHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhcc
Confidence 368999998641 25689999999999999999999999999977 579999999999999887654
No 106
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.36 E-value=5e-07 Score=72.13 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=57.1
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCce-eEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRN-VPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~r-vPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
..|...+|+++|... +++|.+++|+.+++.+|.+++.++ +||+|.+ +++|+||..++++.+.
T Consensus 11 ~~~~~~~v~~im~~~----~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 11 HHMKVKDVCKLISLK----PTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp TTCBHHHHTTSSCCC----CEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHH
T ss_pred hhhccccHhhcccCC----CceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHh
Confidence 568889999999875 999999999999999999999999 9999964 9999999999999875
No 107
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.35 E-value=1.4e-07 Score=75.84 Aligned_cols=66 Identities=11% Similarity=0.184 Sum_probs=57.6
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhh
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEG 266 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~ 266 (297)
.+.+.+|++||+.. .+++.+.+++++.+++.+|.+++.+++||+|.++++++||||..++++.+.+
T Consensus 34 ~l~~~~v~diM~~~--~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~ 99 (156)
T 3oi8_A 34 DFSDLEVRDAMITR--SRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN 99 (156)
T ss_dssp HHTTCBGGGTCEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC
T ss_pred ccCCCCHhheeeeH--HHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc
Confidence 46789999999752 3488999999999999999999999999999754699999999999987654
No 108
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.35 E-value=1.1e-06 Score=72.15 Aligned_cols=61 Identities=10% Similarity=0.210 Sum_probs=54.9
Q ss_pred ccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 202 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
..+|+++|.+. ++++.+++|+.+++.+|.+++.+++||+|.+ |+++|+||..++++.+...
T Consensus 8 ~~~v~~im~~~----~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~ 68 (184)
T 1pvm_A 8 FMRVEKIMNSN----FKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPR 68 (184)
T ss_dssp CCBGGGTSBTT----CCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGG
T ss_pred ccCHHHhcCCC----CeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhc
Confidence 47899999864 8999999999999999999999999999864 6999999999999987753
No 109
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.30 E-value=6.6e-07 Score=74.38 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=58.4
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
-.|...+|++||+. ..+++.|.+++|+.+++.+|.+++.+++||+|.+.++++||||..++++.+.+.
T Consensus 31 l~l~~~~v~diM~~--~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~ 98 (173)
T 3ocm_A 31 LTLAERSIRSIMTP--RTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE 98 (173)
T ss_dssp HHHTTSCSTTTSEE--GGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred hccCCCCHHHhCCc--HHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC
Confidence 34678899999963 123788999999999999999999999999997557999999999999988653
No 110
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.25 E-value=1.1e-06 Score=85.46 Aligned_cols=65 Identities=9% Similarity=0.168 Sum_probs=58.1
Q ss_pred CCCccchhhHhhhccCCCceEecCC-CCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATD-DSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~-~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.|.+.+|++||.+. +++|.++ +|+.+++.+|.+++++++||+|.++++++||||..++++.+...
T Consensus 380 ~l~~~~V~diM~~~----~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 380 WWWSLAIAELELPA----PPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TTTTSBGGGGCCCC----CSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH
T ss_pred cccCCcHHHhCcCC----CeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc
Confidence 46679999999865 8999999 99999999999999999999994457999999999999988763
No 111
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.24 E-value=9.8e-07 Score=70.70 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=51.3
Q ss_pred cchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHH
Q 022419 203 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQG 263 (297)
Q Consensus 203 tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~ 263 (297)
.+|++||... .++++|.+++|+.+++.+|.+++++++||+|. +++++|+||..++++.
T Consensus 4 ~~v~dim~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~ 61 (180)
T 3sl7_A 4 YTVGDFMTPR--QNLHVVKPSTSVDDALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLAL 61 (180)
T ss_dssp CBHHHHSEEG--GGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC
T ss_pred eeHHHhcCCC--CCceeeCCCCcHHHHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhh
Confidence 5799999761 23899999999999999999999999999997 4699999999999864
No 112
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.24 E-value=1.1e-06 Score=69.81 Aligned_cols=63 Identities=11% Similarity=0.196 Sum_probs=55.0
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
..+++.+|+++ .+++++.+++++.+++.+|.+++++.+||+|. +|+++|+||..++++.+.+.
T Consensus 18 ~~l~~~~v~~~------~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~ 80 (152)
T 2uv4_A 18 KSLEELQIGTY------ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEK 80 (152)
T ss_dssp SBHHHHTCSBC------SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCS
T ss_pred hhHHHccCCcc------CCceEeCCCCcHHHHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcch
Confidence 44567778887 45899999999999999999999999999997 47999999999999988754
No 113
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.15 E-value=3.1e-06 Score=59.03 Aligned_cols=46 Identities=30% Similarity=0.279 Sum_probs=42.7
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHH
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILW 110 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~w 110 (297)
+++.+.+++|+.+|+++|.++++.+.||+|.+ +++|+|+..||+.+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~---------~l~Givt~~dl~~~ 46 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGD---------EILGVVTERDILDK 46 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETT---------EEEEEEEHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEECC---------EEEEEEEHHHHHHH
Confidence 46889999999999999999999999999974 89999999999985
No 114
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.99 E-value=3.9e-06 Score=83.78 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=56.2
Q ss_pred CccchhhHhhhccCCCceEecCCCCHHHHHHHHh-hcCCceeEEEcCCCCCeeEEeehHHHHHHHhhc
Q 022419 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLS-KYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC 267 (297)
Q Consensus 201 k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLs-K~rl~rvPVVd~~~~~i~niITQSaVI~~L~~~ 267 (297)
.+.+|+|+|+.. .++.++++++|+.+++.+|. +++.+++||||. +++++|+||+.|+++.+.+.
T Consensus 451 ~~~~V~diM~p~--~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~ 515 (632)
T 3org_A 451 PEMTAREIMHPI--EGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHV 515 (632)
T ss_dssp TTSBHHHHCBCT--TTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC
T ss_pred ccCcHHHHhhcC--CCceEecCCCcHHHHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHH
Confidence 678999999821 23888999999999999999 799999999997 57999999999999987654
No 115
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.77 E-value=1.9e-05 Score=67.24 Aligned_cols=60 Identities=8% Similarity=0.157 Sum_probs=51.2
Q ss_pred CCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHH
Q 022419 200 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGL 264 (297)
Q Consensus 200 ~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L 264 (297)
.-..+++++|... +++|.++.|+.+++.+|.+++.+.+||+|. +++++|+||..++.+.+
T Consensus 10 ~~~~~~~~~~~~~----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~ 69 (213)
T 1vr9_A 10 HHHMKVKKWVTQD----FPMVEESATVRECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLD 69 (213)
T ss_dssp ---CBGGGGCBSC----SCEEETTCBHHHHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSC
T ss_pred ccccCHHHhhcCC----CeEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhc
Confidence 3456678888776 899999999999999999999999999996 46999999999997654
No 116
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.73 E-value=3.9e-05 Score=68.68 Aligned_cols=61 Identities=11% Similarity=0.293 Sum_probs=55.0
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhc-----CCceeEEEcCCCCCeeEEeehHHHHHH
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQG 263 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~-----rl~rvPVVd~~~~~i~niITQSaVI~~ 263 (297)
-.|...+|++||... |++|.++.|+.+++.+|.+| +++++||||. +++++|+||..+++..
T Consensus 132 l~~~~~~v~~iM~~~----~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 132 LHYEDETAGAIMTTE----FVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRDLIVN 197 (286)
T ss_dssp TTSCTTBHHHHCBSC----CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHHHTTS
T ss_pred hcCChHHHHHhCCCC----ceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHHHHcC
Confidence 367889999999875 99999999999999999998 8899999997 4799999999998763
No 117
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.69 E-value=5.2e-05 Score=64.89 Aligned_cols=60 Identities=5% Similarity=0.153 Sum_probs=54.0
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhc---CCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY---RLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~---rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
-.|...+|++||+.. |+.|.++.|+.+++.+|.++ +++.+||+|. +++++|+||..+++.
T Consensus 49 l~~~~~~v~~iM~~~----~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~ 111 (205)
T 3kxr_A 49 DQYSENEIGRYTDHQ----MLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRRYDIFK 111 (205)
T ss_dssp HHSCTTCGGGGCBCC----CCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEHHHHTT
T ss_pred hCCCcchHHhhccCc----eEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEHHHHHh
Confidence 357788999999886 99999999999999999997 8999999997 569999999999864
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.55 E-value=0.00012 Score=64.77 Aligned_cols=60 Identities=8% Similarity=0.242 Sum_probs=53.7
Q ss_pred CCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhc-----CCceeEEEcCCCCCeeEEeehHHHHHH
Q 022419 199 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQG 263 (297)
Q Consensus 199 ~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~-----rl~rvPVVd~~~~~i~niITQSaVI~~ 263 (297)
.|...+|++||+.. |+.|.++.|+.+++.+|.++ ++.++||+|.+ ++++|+||..+++..
T Consensus 131 ~~~~~~v~~iM~~~----~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTPE----YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA 195 (278)
T ss_dssp HSCTTBGGGTCBSC----CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHHHHHS
T ss_pred CCCcchHHhhcCCC----ceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHHHhcC
Confidence 36678999999875 99999999999999999998 79999999974 799999999999863
No 119
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.90 E-value=0.0007 Score=66.31 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=45.1
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHH
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVV 261 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI 261 (297)
+++++|... ++.+.+++|+.+++.+|.+++..++||+|. +++++||||..++.
T Consensus 90 ~~~~~m~~d----~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 90 IFEAGVVTH----PVTVRPEQTIADVMELTHYHGFAGFPVVTE-NNELVGIITGRDVR 142 (496)
T ss_dssp HCCC--CBC----CCCBCSSSBHHHHHHHHTSSCCCEEEEECS-SSBEEEEEEHHHHT
T ss_pred ccccccccC----ceEECCCCCHHHHHHHHHHcCCcEEEEEcc-CCEEEEEEEHHHHh
Confidence 345666644 789999999999999999999999999997 47999999999985
No 120
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=96.87 E-value=0.00084 Score=64.89 Aligned_cols=62 Identities=8% Similarity=0.216 Sum_probs=54.6
Q ss_pred hcCCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhc-----CCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 196 QEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 196 ~~e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~-----rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
+--.|...+|+++|... ++.+.++.|+.+++.+|.++ ++.++||+|.+ ++++|+||..+++.
T Consensus 148 ~~l~~~~~~v~~iM~~~----~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~ 214 (473)
T 2zy9_A 148 ALARYEEDEAGGLMTPE----YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIV 214 (473)
T ss_dssp HHHTSCTTBSTTTCBSC----EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHH
T ss_pred HHhcCCCCCHHHhCCCC----ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-CcEEEEEEHHHHhc
Confidence 33457788999999875 99999999999999999987 58999999974 79999999999986
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.80 E-value=0.0014 Score=62.85 Aligned_cols=54 Identities=17% Similarity=0.240 Sum_probs=47.4
Q ss_pred hhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcC-CCCCeeEEeehHHHHH
Q 022419 205 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEP-GTPDIKNYITQSAVVQ 262 (297)
Q Consensus 205 V~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~-~~~~i~niITQSaVI~ 262 (297)
++++|... ++.+.+++++.+++.+|.+++.+++||+|. ++++++|+||..+++.
T Consensus 92 ~~~im~~~----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 92 SENGVIID----PFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp HTTTTSSS----CCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred HHhcCcCC----CeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 46777754 888999999999999999999999999993 3579999999999985
No 122
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.75 E-value=0.00037 Score=68.00 Aligned_cols=49 Identities=20% Similarity=0.156 Sum_probs=0.0
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHHHH
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVL 112 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~wvL 112 (297)
+++.++.++++.+|.++|.++++..+||+|.+ ++++|||+..||+..+.
T Consensus 172 ~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~--------g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 172 KLVTAHQDTKLSEANKIIWEKKLNALPIIDDD--------QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ---------------------------------------------------------
T ss_pred CCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC--------CeEEEEEEecHHHHhhh
Confidence 38899999999999999999999999999976 48999999999998543
No 123
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.68 E-value=0.0023 Score=62.95 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.4
Q ss_pred chhhHhhhcc--CCCceEecCCCCHHHHHHHHhhcCCceeEEEcCC-CCCeeEEeehHHHHH
Q 022419 204 TVRSIIKSYR--WAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG-TPDIKNYITQSAVVQ 262 (297)
Q Consensus 204 kV~dI~~s~r--waPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~-~~~i~niITQSaVI~ 262 (297)
.|+++++... ...++.+.+++|+.+++.+|.+++..++||+|.+ +++++||||..++..
T Consensus 108 ~V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 108 QVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp HHHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred HHHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 3666664421 2236789999999999999999999999999972 469999999999853
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.45 E-value=0.00037 Score=68.03 Aligned_cols=52 Identities=13% Similarity=0.296 Sum_probs=2.3
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHH
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVV 261 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI 261 (297)
+++++|... ++.+.+++|+.+++.+|.+|++.++||+| +++++||||..++.
T Consensus 89 ~~~~~m~~~----~v~v~~~~tv~ea~~~m~~~~~s~~pVvd--~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 89 KHETAIVRD----PVTVTPSTKIIELLQMAREYGFSGFPVVE--QGELVGIVTGRDLR 140 (490)
T ss_dssp HCCC------------------------------------------------------
T ss_pred ccccCcccC----ceEeCCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEhHHhh
Confidence 356677654 77999999999999999999999999999 57999999999985
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.43 E-value=0.00046 Score=66.38 Aligned_cols=53 Identities=15% Similarity=0.268 Sum_probs=0.5
Q ss_pred hhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEeehHHHHH
Q 022419 205 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ 262 (297)
Q Consensus 205 V~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niITQSaVI~ 262 (297)
++++|... ++.|.+++++.+++.+|.+++++.+||+|. +++++||||..++..
T Consensus 97 ~~~iM~~~----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 97 TENGIIYD----PITVTPDMTVKEAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRF 149 (494)
T ss_dssp C---------------------------------------------------------
T ss_pred HhhcCccC----CeEECCCCCHHHHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHh
Confidence 56778654 889999999999999999999999999997 469999999999975
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.29 E-value=0.00045 Score=67.01 Aligned_cols=56 Identities=13% Similarity=0.113 Sum_probs=26.0
Q ss_pred chhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCC--CCCeeEEeehHHHHHH
Q 022419 204 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG--TPDIKNYITQSAVVQG 263 (297)
Q Consensus 204 kV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~--~~~i~niITQSaVI~~ 263 (297)
+++++|.+. .+++.+++++.+++.+|.+++++.+||+|.+ +++++||||..++...
T Consensus 109 ~~~~im~~~----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITD----PVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSS----CCCCCC-----------------CEESCC--------CCEECTTTTC--
T ss_pred hhhhccccC----CEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh
Confidence 466777643 6789999999999999999999999999974 4799999999998753
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=95.53 E-value=0.0041 Score=60.10 Aligned_cols=47 Identities=23% Similarity=0.372 Sum_probs=0.0
Q ss_pred CcEEecCCCCHHHHHHHHHHCCCcccceecCCCCCCCccccceeEEEehHHHHHH
Q 022419 56 RVIEIMADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILW 110 (297)
Q Consensus 56 ~VIeI~~d~sI~dAvkiLse~nIlsAPV~D~da~~~~~w~dryiGiVd~~dIv~w 110 (297)
+++.+..++++.+++++|.++++..+||+|.+ ++++|+|+..||+..
T Consensus 159 ~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~--------g~lvGiiT~~Dil~~ 205 (486)
T 2cu0_A 159 EVITVPESIEVEEALKIMIENRIDRLPVVDER--------GKLVGLITMSDLVAR 205 (486)
T ss_dssp -------------------------------------------------------
T ss_pred CCeEECCcCcHHHHHHHHHHcCCCEEEEEecC--------CeEEEEEEHHHHHHh
Confidence 67889999999999999999999999999975 489999999999884
No 128
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.43 E-value=0.0069 Score=61.24 Aligned_cols=44 Identities=27% Similarity=0.384 Sum_probs=0.0
Q ss_pred ceEecCCCCHHHHHHHHhhcCCceeEEEcCC--CCCeeEEeehHHH
Q 022419 217 FLPVATDDSMLSVLLLLSKYRLRNVPIIEPG--TPDIKNYITQSAV 260 (297)
Q Consensus 217 FlpV~~~~sll~vllLLsK~rl~rvPVVd~~--~~~i~niITQSaV 260 (297)
.+++.|++|+.+++.||.||++.-+||+|.+ +++++||||..|+
T Consensus 148 Pvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~ 193 (556)
T 4af0_A 148 PLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDV 193 (556)
T ss_dssp ----------------------------------------------
T ss_pred CeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccc
Confidence 3678999999999999999999999999975 5799999999886
No 129
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=50.28 E-value=19 Score=27.33 Aligned_cols=55 Identities=9% Similarity=0.152 Sum_probs=38.2
Q ss_pred CCceEecCCCCHHHHHHHHhhcCCceeE---EEcCCCCCe------eEEeehHHHHHHHhhccCC
Q 022419 215 APFLPVATDDSMLSVLLLLSKYRLRNVP---IIEPGTPDI------KNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 215 aPFlpV~~~~sll~vllLLsK~rl~rvP---VVd~~~~~i------~niITQSaVI~~L~~~~g~ 270 (297)
-.|+.|+-+..--+--.+..+|+++.+| ++|.+ |++ .|.++...+.+.|.+..++
T Consensus 66 ~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~-G~~v~~~~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 66 TVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQ-GQEHPQARVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTT-SCBCGGGCBCSCCCHHHHHHHHHHC---
T ss_pred cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCC-CCEeeeeeeeeccCHHHHHHHHHhcCcc
Confidence 3467777765545666788889999888 67663 454 4888999999998876654
No 130
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=47.15 E-value=8.2 Score=35.05 Aligned_cols=32 Identities=25% Similarity=0.509 Sum_probs=24.7
Q ss_pred CceeEEEcCCCCCeeEEee-------hHHHHHHHhhccC
Q 022419 238 LRNVPIIEPGTPDIKNYIT-------QSAVVQGLEGCKG 269 (297)
Q Consensus 238 l~rvPVVd~~~~~i~niIT-------QSaVI~~L~~~~g 269 (297)
|||+||+|+.+|++.|+.= .-+.++.|..-..
T Consensus 119 vRR~pIi~~~tGeVlG~Ly~gvVLnnNfslve~l~~~sn 157 (221)
T 2hje_A 119 VRRVPILDPSTGEVLGFSFNAVVLDNNFALMEKLKSESN 157 (221)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECTTCHHHHHHHHHHTT
T ss_pred EEccceecCCCCcEEEEEEEEEEecCcHHHHHHHHhcCC
Confidence 8999999999999999863 3366666665444
No 131
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=46.11 E-value=12 Score=30.87 Aligned_cols=67 Identities=18% Similarity=0.317 Sum_probs=46.9
Q ss_pred CCCCccchhhHhhhccCCCceEecCCCCHHHHHHHHhhcCCceeE---EEcCCCCC-e--eEEeehHHHHHHHhhcc
Q 022419 198 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVP---IIEPGTPD-I--KNYITQSAVVQGLEGCK 268 (297)
Q Consensus 198 e~~k~tkV~dI~~s~rwaPFlpV~~~~sll~vllLLsK~rl~rvP---VVd~~~~~-i--~niITQSaVI~~L~~~~ 268 (297)
+-|.+..|.++++.. |+.++-|..=-+...++.+|++...| ++|+++|+ + .+.++..+.++.|.+..
T Consensus 63 ~vf~d~~V~~~l~~~----fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 63 DVWSNEAVKNIIREH----FIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFL 135 (153)
T ss_dssp HTTTCHHHHHHHHHT----EEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESSCCHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHcC----eEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCCCCHHHHHHHHHHHH
Confidence 558899999999776 77777655445667788899988776 45886453 2 12367788887776654
No 132
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=43.86 E-value=50 Score=24.89 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=41.0
Q ss_pred ccchhhHhhhccCCCceEecCCC--CHHHHHHHHhhcCCceeEEEcCCCCCe-eEEeehHHHHHHHhhccCCch
Q 022419 202 STTVRSIIKSYRWAPFLPVATDD--SMLSVLLLLSKYRLRNVPIIEPGTPDI-KNYITQSAVVQGLEGCKGRDW 272 (297)
Q Consensus 202 ~tkV~dI~~s~rwaPFlpV~~~~--sll~vllLLsK~rl~rvPVVd~~~~~i-~niITQSaVI~~L~~~~g~dw 272 (297)
..+++.++++.. -||--++-+. ...+-++-+ ..+.+.||+|--++|.+ .|+ +..++.+.|++..|++.
T Consensus 17 C~~aK~~L~~~g-i~y~~idi~~d~~~~~~~~~~-~~G~~tVP~I~i~Dg~~l~~~-~~~el~~~L~el~gL~~ 87 (92)
T 2lqo_A 17 CLRLKTALTANR-IAYDEVDIEHNRAAAEFVGSV-NGGNRTVPTVKFADGSTLTNP-SADEVKAKLVKIAGLEH 87 (92)
T ss_dssp HHHHHHHHHHTT-CCCEEEETTTCHHHHHHHHHH-SSSSSCSCEEEETTSCEEESC-CHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhcC-CceEEEEcCCCHHHHHHHHHH-cCCCCEeCEEEEeCCEEEeCC-CHHHHHHHHHHhcCCcc
Confidence 345666665543 3565555443 333333222 13788999886555554 443 66788899999988863
No 133
>3c38_A Autoinducer 2 sensor kinase/phosphatase LUXQ; 2-component system, quorum sensing, histidine kinase, hydrolase, inner membrane, membrane; 2.30A {Vibrio cholerae} PDB: 3c30_A
Probab=39.66 E-value=11 Score=35.17 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=23.5
Q ss_pred CceeEEEcCCCCCeeEEee-------hHHHHHHHhhccC
Q 022419 238 LRNVPIIEPGTPDIKNYIT-------QSAVVQGLEGCKG 269 (297)
Q Consensus 238 l~rvPVVd~~~~~i~niIT-------QSaVI~~L~~~~g 269 (297)
+||+||+|+.+|++.|+.= .-+.++.|..-..
T Consensus 138 vRr~pIid~~TGEVlG~Ly~gvVLnnNfslve~l~~~sn 176 (270)
T 3c38_A 138 MRRSSLIEAGTGQVVGYLYVGIVLNDNFALLENIRSGSN 176 (270)
T ss_dssp EEEEEECCCC-CCCCEEEEEEEECTTCHHHHHHHHHHTT
T ss_pred EEccceecCCCCcEEEEEEEEEEecCcHHHHHHHHhcCC
Confidence 8999999999999999863 3366666665443
No 134
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=37.56 E-value=51 Score=24.35 Aligned_cols=47 Identities=28% Similarity=0.330 Sum_probs=31.6
Q ss_pred ceEecCCCCHHHHHHHHhhcCCceeEEEc-CCCCCee-EEeehHHHHHHHhhccC
Q 022419 217 FLPVATDDSMLSVLLLLSKYRLRNVPIIE-PGTPDIK-NYITQSAVVQGLEGCKG 269 (297)
Q Consensus 217 FlpV~~~~sll~vllLLsK~rl~rvPVVd-~~~~~i~-niITQSaVI~~L~~~~g 269 (297)
|.-|+-+..- .+..+|+++ |||+- .+ |+.+ |..+...+.+.|.+...
T Consensus 29 ~~~vdid~~~----~l~~~~g~~-vPtl~~~~-G~~v~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 29 FFSVFIDDDA----ALESAYGLR-VPVLRDPM-GRELDWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp EEEEECTTCH----HHHHHHTTT-CSEEECTT-CCEEESCCCHHHHHHHHHTCC-
T ss_pred eEEEECCCCH----HHHHHhCCC-cCeEEEEC-CEEEeCCCCHHHHHHHHHHHHH
Confidence 4555554432 366688998 99998 54 5655 67888888888876543
No 135
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=36.02 E-value=29 Score=23.35 Aligned_cols=47 Identities=11% Similarity=0.029 Sum_probs=34.3
Q ss_pred CceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCC--eeEEeehHHHHHHHhhc
Q 022419 216 PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPD--IKNYITQSAVVQGLEGC 267 (297)
Q Consensus 216 PFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~--i~niITQSaVI~~L~~~ 267 (297)
.|+.|+-+..- .+..+|+++.+|.+=- +|+ ..|..+...+.+.|.+.
T Consensus 35 ~~~~vd~~~~~----~~~~~~~v~~~Pt~~~-~G~~~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 35 DVEKIDIMVDR----EKAIEYGLMAVPAIAI-NGVVRFVGAPSREELFEAINDE 83 (85)
T ss_dssp CEEEECTTTCG----GGGGGTCSSCSSEEEE-TTTEEEECSSCCHHHHHHHHHH
T ss_pred EEEEEECCCCH----HHHHhCCceeeCEEEE-CCEEEEccCCCHHHHHHHHHHH
Confidence 46666665432 4667899999998776 567 67877888888887654
No 136
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Probab=33.48 E-value=30 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=25.0
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.+.|||+..++|. +|++| +|+++|.+..+
T Consensus 43 ~~~nP~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 77 (213)
T 3m0f_A 43 KAINPVVKAPTLVCEGGE---VLMDSSLIIDYLETLAG 77 (213)
T ss_dssp HHHCTTCCSSEEECTTCC---EEESHHHHHHHHHHHHC
T ss_pred HhcCCCCCcCeEEeCCCc---EEEcHHHHHHHHHHhcC
Confidence 345668899999743444 57887 78899998776
No 137
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=33.40 E-value=27 Score=28.96 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=24.7
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||...++|. +|++| +|+++|.+..+
T Consensus 63 ~~~nP~gkVPvL~~~dG~---~l~ES~aI~~YL~~~~~ 97 (225)
T 4glt_A 63 ADHNPLGKIPVLILPDGE---SLYDSRVIVEYLDHRTP 97 (225)
T ss_dssp GGTCTTCCSCEEECTTSC---EECSHHHHHHHHHTTCS
T ss_pred HHhCCCCCCCEEEeCCCC---EEeehHHHHHHHHHhCC
Confidence 333558899997654555 57888 88899988775
No 138
>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}
Probab=32.97 E-value=30 Score=28.11 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=24.4
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||+..++|. +|++| +|+++|.+..+
T Consensus 46 l~~nP~g~vP~L~~d~g~---~l~ES~aI~~YL~~~~~ 80 (215)
T 4gf0_A 46 LAINPKGRVPALRLEDDT---ILTETGALLDYVAAIAP 80 (215)
T ss_dssp HTTCTTCCSCEEECTTSC---EEECHHHHHHHHHHHCG
T ss_pred HHhCCCCCcceEEecCCc---EEechHHHHHHHHHhCC
Confidence 344567899999654444 47888 78899987653
No 139
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=32.90 E-value=68 Score=22.99 Aligned_cols=36 Identities=8% Similarity=0.407 Sum_probs=23.7
Q ss_pred HHhhcCCceeE---EEcCCCCCe---eEEeehHHHHHHHhhcc
Q 022419 232 LLSKYRLRNVP---IIEPGTPDI---KNYITQSAVVQGLEGCK 268 (297)
Q Consensus 232 LLsK~rl~rvP---VVd~~~~~i---~niITQSaVI~~L~~~~ 268 (297)
+..+|+++.+| ++|.+ |++ .|..+...+.+.|.+..
T Consensus 93 ~~~~~~i~~~P~~~~id~~-g~i~~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 93 VWANFGVTQQPAYAFVDPH-GNVDVVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHHHTTCCSSSEEEEECTT-CCEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHcCCCCCceEEEECCC-CCEEEEecCCCHHHHHHHHHHHh
Confidence 34567777666 78764 576 45567777777776543
No 140
>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*
Probab=30.95 E-value=38 Score=27.40 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=24.3
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.+.|||+..++|. .|++| +|+++|.+..+
T Consensus 65 ~~nP~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 98 (233)
T 3ibh_A 65 AKNYSGTVPVLELDDGT---LIAECTAITEYIDALDG 98 (233)
T ss_dssp HHCTTCCSCEEECTTCC---EEESHHHHHHHHHHHTS
T ss_pred ccCCCCccceEEecCCe---EEecHHHHHHHHHHhCC
Confidence 45667899999843443 47887 78899998765
No 141
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=30.10 E-value=19 Score=25.54 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=24.3
Q ss_pred HHHHhhcCCceeEEEcCCCCCeeEEeehHHHHHHHh
Q 022419 230 LLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLE 265 (297)
Q Consensus 230 llLLsK~rl~rvPVVd~~~~~i~niITQSaVI~~L~ 265 (297)
-.++.+++.+.+|++-.++..+.|+ +...+.+.|.
T Consensus 57 ~~l~~~~g~~~vP~l~~~g~~i~G~-~~~~l~~~l~ 91 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVKGDKHVLGY-NEEKLKELIR 91 (92)
T ss_dssp HHHHHHHSSSCSCEEEETTEEEESC-CHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEECCEEEeCC-CHHHHHHHhc
Confidence 3455678899999988754445555 7777777664
No 142
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=29.86 E-value=67 Score=24.19 Aligned_cols=49 Identities=12% Similarity=0.249 Sum_probs=34.1
Q ss_pred ceEecCCCCHHHHHHHHhhcCCceeE---EEcCCCCCe---eEEeehHHHHHHHhhccCC
Q 022419 217 FLPVATDDSMLSVLLLLSKYRLRNVP---IIEPGTPDI---KNYITQSAVVQGLEGCKGR 270 (297)
Q Consensus 217 FlpV~~~~sll~vllLLsK~rl~rvP---VVd~~~~~i---~niITQSaVI~~L~~~~g~ 270 (297)
|+.|+-+..- .+..+|+++.+| ++|. +|++ .|..+...+.+.|.+..+.
T Consensus 73 ~~~vd~~~~~----~l~~~~~v~~~Pt~~~~~~-~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 73 IYKVDTEKEQ----ELAGAFGIRSIPSILFIPM-EGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp EEEEETTTCH----HHHHHTTCCSSCEEEEECS-SSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred EEEEeCCCCH----HHHHHcCCCCCCEEEEECC-CCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 6777666542 567789999999 6655 4565 4556778888888776554
No 143
>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}
Probab=29.86 E-value=36 Score=28.25 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=24.7
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.+.|||+..++|. .|++| +|+++|.+..+
T Consensus 47 ~~~P~g~vPvL~~~dg~---~l~eS~aI~~yL~~~~~ 80 (238)
T 4exj_A 47 KLNPAGIVPTLVDDKGT---PITESNNILLYIADTYD 80 (238)
T ss_dssp HHCTTCCSCEEECTTSC---EEESHHHHHHHHHHHHC
T ss_pred hhCCCCCCCEEEeCCCc---EEeeHHHHHHHHHHhcC
Confidence 34567899999875544 46777 78899988765
No 144
>3gr5_A ESCC; secretin, type III secretion system, outer membrane, transport, membrane protein; 2.05A {Escherichia coli}
Probab=29.81 E-value=46 Score=27.65 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=50.5
Q ss_pred ccCCCceEecCCCCHHHHHHHHhhcCCceeEEEcCCCCCeeEEe---ehHHHHHHHhhccCCchhh
Q 022419 212 YRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYI---TQSAVVQGLEGCKGRDWFD 274 (297)
Q Consensus 212 ~rwaPFlpV~~~~sll~vllLLsK~rl~rvPVVd~~~~~i~niI---TQSaVI~~L~~~~g~dwf~ 274 (297)
++-.||--.-.+.++-++|..|.++-=.++.|=+.-+|++.+-+ +-..+++.|.+..|+.|+.
T Consensus 11 w~~~p~s~~~~~~~v~~vL~~lA~~~g~nivvs~~V~G~vs~rl~~~~~~q~L~~l~~~~gL~~~~ 76 (156)
T 3gr5_A 11 LGKNEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYY 76 (156)
T ss_dssp HCSCCEEEEEEEEEHHHHHHHHHHHTTCCEEECTTCCCEEEEEEEEECHHHHHHHHHHHHTEEEEE
T ss_pred cCCCCEEEEEcCCCHHHHHHHHHHhhCCCEEECCCcceEEEEEecCCCHHHHHHHHHHHCCceEEE
Confidence 44467777888999999999999976667756555577888775 5679999999999999965
No 145
>4gci_A Glutathione S-transferase; GST, enzyme function initiative, structural genomics; HET: GSH; 1.50A {Yersinia pestis} PDB: 4g9h_A*
Probab=29.24 E-value=32 Score=27.98 Aligned_cols=33 Identities=24% Similarity=0.166 Sum_probs=24.5
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.++|||+..+++. +|++| +|+++|.+..+
T Consensus 48 ~~nP~g~vP~L~~d~~~---~l~eS~aI~~YL~~~~~ 81 (211)
T 4gci_A 48 SINPKGQVPALVLDDGS---LLTEGVAIVQYLADKVP 81 (211)
T ss_dssp GTCTTCCSCEEECTTSC---EEECHHHHHHHHHHHCG
T ss_pred HhCCCCCCCccccCCCC---EEecCHHHHHHHHhcCC
Confidence 34567889998755544 48888 79999988765
No 146
>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*
Probab=29.15 E-value=32 Score=27.58 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=23.8
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
.+-.+.|||+..++|. +|++| +|+++|.+..+
T Consensus 49 ~nP~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 81 (214)
T 4id0_A 49 DNPLGKIPALRLDNGQ---VLYDSRVILDYLDQQHV 81 (214)
T ss_dssp TCTTCCSSEEECTTSC---EECSHHHHHHHHHHTSC
T ss_pred cCCCcCCCeEEecCCc---EeecHHHHHHHHHHhCC
Confidence 3456889999843444 57887 78899998765
No 147
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=29.10 E-value=41 Score=27.69 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=24.8
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.++|||+..++|. .|++| +|+++|.+..+
T Consensus 65 ~~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 98 (241)
T 3vln_A 65 KKNPFGLVPVLENSQGQ---LIYESAITCEYLDEAYP 98 (241)
T ss_dssp HHCTTCCSCEEECTTCC---EEESHHHHHHHHHHHSC
T ss_pred HhCCCCCCCEEEECCCc---EEEcHHHHHHHHHHhCC
Confidence 35678899999874443 57877 78899998765
No 148
>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}
Probab=28.10 E-value=39 Score=26.68 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=23.6
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
.+-.+.|||+..++|. +|++| +|+++|.+..+
T Consensus 43 ~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 75 (202)
T 3r2q_A 43 FNPLGKVPVLVTEEGE---CWFDSPIIAEYIELMNV 75 (202)
T ss_dssp TCTTCCSCEEECTTSC---EECSHHHHHHHHHHTCC
T ss_pred hCCCCCcCeEEecCCc---EEecHHHHHHHHHHhCC
Confidence 3456899999843443 57888 78899998765
No 149
>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*
Probab=28.01 E-value=38 Score=27.80 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=24.6
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.+.|||+..++|. +|++| +|+++|.+..+
T Consensus 44 ~~nP~g~vPvL~~~~g~---~l~eS~aI~~yL~~~~~ 77 (226)
T 3tou_A 44 QFNPLGKVPCLVMDDGG---ALFDSRVIAEYADTLSP 77 (226)
T ss_dssp GTCTTCCSCEEECTTSC---EECSHHHHHHHHHHSCS
T ss_pred HhCCCCCCCEEEeCCCC---EeccHHHHHHHHHHhCC
Confidence 44668899999743444 57887 78899988765
No 150
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=27.56 E-value=40 Score=27.32 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=26.0
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+..+.|||+..++|. +|++| +|+++|.+..+
T Consensus 43 ~~~~p~~~vP~l~~~~g~---~l~eS~aI~~yL~~~~~ 77 (218)
T 3ir4_A 43 TRMIGQKMVPILQKDDSR---YLPESMDIVHYVDNLDG 77 (218)
T ss_dssp HHHHSSSCSCEEECTTSC---EEECHHHHHHHHHHTTS
T ss_pred hhcCCCceeeeEEEeCCe---EeeCHHHHHHHHHHhCC
Confidence 355789999999843444 57887 78899998776
No 151
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=27.42 E-value=37 Score=28.01 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=24.8
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.+.|||+..++|. +|++| +|+++|.+..+
T Consensus 65 ~~nP~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~ 98 (239)
T 3q18_A 65 TKHPFGHIPVLETSQSQ---LIYESVIACEYLDDAYP 98 (239)
T ss_dssp GTSTTCCSCEEECTTCC---EECSHHHHHHHHHHHSC
T ss_pred hcCCCCCCCEEEeCCCc---eeecHHHHHHHHHHhCC
Confidence 45567899999874443 57888 78899998765
No 152
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=26.81 E-value=40 Score=27.24 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=23.8
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.++|||+..+ |. +|++| +|+++|.+..+
T Consensus 50 ~~~P~g~vP~L~~~-g~---~l~eS~aI~~yL~~~~~ 82 (215)
T 3lyp_A 50 EVNPYGSLPTLVDR-DL---ALWESTVVMEYLDERYP 82 (215)
T ss_dssp HHCTTCCSSEEECC--C---EEESHHHHHHHHHHHSC
T ss_pred HHCCCCCcCeEEEC-CE---EeecHHHHHHHHHHhCC
Confidence 34668899999853 33 67887 78899998765
No 153
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*
Probab=26.26 E-value=28 Score=28.96 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=25.2
Q ss_pred HHhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 232 LLSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 232 LLsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
++..+-.+.|||+..++ +.|++| +|+++|.+..+
T Consensus 42 ~~~~nP~g~vPvL~~~~----~~l~eS~aI~~YL~~~~~ 76 (242)
T 3ubk_A 42 FLKISPMGKIPVLEMDG----KFIFESGAILEFLDTIFP 76 (242)
T ss_dssp HHTTSTTCCSCEEEETT----EEECCHHHHHHHHHHHCC
T ss_pred HHhcCCCCCcCeEEECC----ceEecHHHHHHHHHHhCC
Confidence 34557788999998754 237877 78899998764
No 154
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=25.90 E-value=58 Score=26.58 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=23.0
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhcc
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCK 268 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~ 268 (297)
..+-.+.|||+..++|. +|++| +|+++|.+..
T Consensus 48 ~~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~ 80 (225)
T 3m8n_A 48 AKNPSGQVPLLETAPGR---YLAESNAILWYLAVGT 80 (225)
T ss_dssp TTCTTCCSSEEECSTTC---EEECHHHHHHHHHTTS
T ss_pred HhCCCCCCCEEEeCCCC---EEEcHHHHHHHHHcCC
Confidence 34567899999854444 47887 7889998743
No 155
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A {Methylococcus capsulatus} PDB: 3uap_A*
Probab=25.60 E-value=45 Score=27.50 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=23.1
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhcc
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCK 268 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~ 268 (297)
.+-.+.|||+..++|. +|++| +|+++|.+..
T Consensus 48 ~nP~g~vP~L~~~dg~---~l~eS~aI~~YL~~~~ 79 (227)
T 3uar_A 48 VNPKGYVPALQLDDGQ---VLTEDQVILQYLADLK 79 (227)
T ss_dssp HCTTCCSCEEECTTCC---EEECHHHHHHHHHHHC
T ss_pred hCCCCCCCeEEECCCC---EEecHHHHHHHHHHhC
Confidence 4567899999865443 57887 7889998765
No 156
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=25.14 E-value=47 Score=26.58 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=22.3
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhh
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEG 266 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~ 266 (297)
+..+-.+.|||+..++|. .|++| +|+++|.+
T Consensus 47 ~~~~P~g~vP~L~~d~g~---~l~eS~aI~~yL~~ 78 (210)
T 3m3m_A 47 LAKNPNGKIPVLELEDGT---CLWESNAILNFLAD 78 (210)
T ss_dssp HTTCTTCCSCEEEETTSC---EEECHHHHHHHHHT
T ss_pred HhhCCCCCCCEEEecCCE---EEecHHHHHHHHhc
Confidence 344667899999833444 57887 78899987
No 157
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=25.09 E-value=41 Score=27.31 Aligned_cols=33 Identities=12% Similarity=0.071 Sum_probs=24.7
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||+..+ | .+|++| +|+++|.+..+
T Consensus 47 ~~~~P~g~vP~L~~~-g---~~l~eS~aI~~yL~~~~~ 80 (216)
T 3lyk_A 47 MELNPYGTVPTLVDR-D---LVLFNSRIIMEYLDERFP 80 (216)
T ss_dssp HHHCTTCCSCEEEET-T---EEEESHHHHHHHHHHHSC
T ss_pred HhhCCCCCcCeEEEC-C---eEecCHHHHHHHHHHhCC
Confidence 344668899999853 3 368888 88899998765
No 158
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=24.99 E-value=52 Score=26.49 Aligned_cols=35 Identities=17% Similarity=0.030 Sum_probs=25.1
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccCC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKGR 270 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g~ 270 (297)
+..+-.+.|||+..++|. .|++| +|+++|.+..+.
T Consensus 44 ~~~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~~~ 79 (219)
T 3f6d_A 44 LKLNPQHCIPTLVDEDGF---VLWESRAIQIYLVEKYGA 79 (219)
T ss_dssp HHHCTTCCSCEEECTTSC---EEESHHHHHHHHHHHHTT
T ss_pred HhhCCCCccCeEEeCCCC---EEEcHHHHHHHHHHhcCC
Confidence 345667899999863343 57887 688999887653
No 159
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=24.91 E-value=34 Score=27.91 Aligned_cols=34 Identities=18% Similarity=0.428 Sum_probs=24.9
Q ss_pred HHhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 232 LLSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 232 LLsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
++..+-.++|||+..++ +.|++| +|+++|.+..+
T Consensus 41 ~~~~~P~g~vP~L~~~~----~~l~eS~aI~~yL~~~~~ 75 (229)
T 3lxz_A 41 ALEVSPRGKVPVLETEH----GFLSETSVILDYIEQTQG 75 (229)
T ss_dssp HHTTSTTSCSCEEEETT----EEEESHHHHHHHHHHHCC
T ss_pred HHhhCCCCCcCeEEeCC----ceeecHHHHHHHHHhcCC
Confidence 34556788999998654 237887 78899987653
No 160
>2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*
Probab=24.05 E-value=59 Score=25.78 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=24.8
Q ss_pred HHhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 232 LLSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 232 LLsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
.+..+-.++|||+.. +| -.|++| +|+++|.+..+
T Consensus 41 ~~~~~P~g~vP~L~~-~g---~~l~eS~aI~~yL~~~~~ 75 (198)
T 2cvd_A 41 IKSTLPFGKIPILEV-DG---LTLHQSLAIARYLTKNTD 75 (198)
T ss_dssp HHTTSTTSCSCEEEE-TT---EEEECHHHHHHHHHTTST
T ss_pred hccCCCCCCCCEEEE-CC---EEEecHHHHHHHHHHHcC
Confidence 344567889999874 33 358888 78899987654
No 161
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=23.85 E-value=57 Score=28.00 Aligned_cols=31 Identities=13% Similarity=0.195 Sum_probs=23.2
Q ss_pred cCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 236 YRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 236 ~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+-.++|||++.++|. +|++| +|+++|.+..+
T Consensus 52 nP~g~VPvL~~d~g~---~l~ES~aI~~YL~~~~p 83 (265)
T 4g10_A 52 GGTTALPLLDVENGE---SLKESMVILRYLEQRYP 83 (265)
T ss_dssp TSCCCSCEEECTTSC---EEECHHHHHHHHHHHSC
T ss_pred CCCCccceEEECCCe---EEeccHHHHHHHhhcCc
Confidence 568999999755555 46777 78899987654
No 162
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=23.76 E-value=45 Score=22.63 Aligned_cols=31 Identities=13% Similarity=0.010 Sum_probs=18.8
Q ss_pred HHHhhcCCceeEEEcCCCCCeeEEeeh-HHHHHHHh
Q 022419 231 LLLSKYRLRNVPIIEPGTPDIKNYITQ-SAVVQGLE 265 (297)
Q Consensus 231 lLLsK~rl~rvPVVd~~~~~i~niITQ-SaVI~~L~ 265 (297)
.+..+++.+.+|++-.+ |+. |.. .+|.+++.
T Consensus 42 ~~~~~~~~~~vP~l~~~-g~~---i~g~~~i~~~~~ 73 (82)
T 1fov_A 42 EMIKRSGRTTVPQIFID-AQH---IGGYDDLYALDA 73 (82)
T ss_dssp HHHHHHSSCCSCEEEET-TEE---EESHHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEC-CEE---EeCHHHHHHHHH
Confidence 34556789999998653 443 334 44555443
No 163
>1wgr_A Growth factor receptor-bound protein 7; RA domain, GRB7, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=23.73 E-value=41 Score=26.74 Aligned_cols=28 Identities=18% Similarity=0.190 Sum_probs=24.5
Q ss_pred CCCCCCcEEecCCCCHHHHHHHHHHCCC
Q 022419 51 NVPGGRVIEIMADTTIPDAVKILSECNI 78 (297)
Q Consensus 51 ~~~~~~VIeI~~d~sI~dAvkiLse~nI 78 (297)
...+.+.|.|.+++|..|++++|.++|=
T Consensus 17 ~Dgssksi~V~~~~Ta~dv~~~L~~K~~ 44 (100)
T 1wgr_A 17 EDGACRSVEVAAGATARHVCEMLVQRAH 44 (100)
T ss_dssp TTSCEEEEEECTTCCHHHHHHHHHCSSS
T ss_pred cCCCEEEEEECCCCcHHHHHHHHHHHcC
Confidence 3447899999999999999999999873
No 164
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia xenovorans} PDB: 2gdr_A*
Probab=23.70 E-value=50 Score=26.33 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=22.3
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhcc
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCK 268 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~ 268 (297)
.+-.++|||+..++|. .|++| +|+++|.+..
T Consensus 46 ~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~ 77 (203)
T 2dsa_A 46 VNPAGYVPCLQLDDGR---TLTEGPAIVQYVADQV 77 (203)
T ss_dssp TCTTCCSCEEECTTSC---EEESHHHHHHHHHHHC
T ss_pred hCCCCCCCEEEecCCc---EEecHHHHHHHHHHhC
Confidence 3457899999743443 67888 7889998754
No 165
>1f2e_A Glutathione S-transferase; GST complexed with glutathione, thioredoxin superfamily fold transferase; HET: GSH; 2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1 c.47.1.5
Probab=23.63 E-value=66 Score=25.58 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=22.7
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhcc
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCK 268 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~ 268 (297)
.+-.++|||+..++|. .|++| +|+++|.+..
T Consensus 46 ~~P~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~ 77 (201)
T 1f2e_A 46 VNPSGKVPALTLDSGE---TLTENPAILLYIADQN 77 (201)
T ss_dssp HCTTCCSCEEECTTSC---EEESHHHHHHHHHHTC
T ss_pred cCcCCCCceEEecCCc---EeeHHHHHHHHHHHhC
Confidence 3567899999843443 57887 7889998765
No 166
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Probab=23.53 E-value=50 Score=26.30 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=22.4
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhcc
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCK 268 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~ 268 (297)
.+-.++|||+..++|. .|++| +|+++|.+..
T Consensus 46 ~nP~g~vP~L~~~~g~---~l~eS~aI~~yL~~~~ 77 (201)
T 1n2a_A 46 VNPKGQVPALLLDDGT---LLTEGVAIMQYLADSV 77 (201)
T ss_dssp TCTTCCSCEEECTTSC---EEESHHHHHHHHHHTC
T ss_pred hCcCCCCCeEEecCCc---EEecHHHHHHHHHHhC
Confidence 3456899999743443 57887 7889998765
No 167
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=22.49 E-value=51 Score=26.95 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=24.2
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||+..++ ..|++| +|+++|.+..|
T Consensus 47 ~~~nP~g~vP~L~d~~----~~l~eS~aI~~YL~~~~~ 80 (228)
T 4hi7_A 47 LKKNPQHTVPLLEDGD----ANIADSHAIMAYLVSKYG 80 (228)
T ss_dssp HHHCTTCCSCEEEETT----EEEESHHHHHHHHHHHHC
T ss_pred HHhCCCCceeeEEECC----EEEechHHHHHHHHHhhc
Confidence 3446688999998643 357887 88899987654
No 168
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=21.70 E-value=56 Score=27.15 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=24.7
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.+.|||+..+ | -+|++| +|+++|.+..+
T Consensus 70 ~~~nP~g~vPvL~~~-g---~~l~eS~aI~~YL~~~~~ 103 (243)
T 3qav_A 70 LELNPRGQVPTFTDG-D---VVVNESTAICMYLEEKYP 103 (243)
T ss_dssp HHHCTTCCSCEEEET-T---EEECSHHHHHHHHHHHCT
T ss_pred HhhCCCCCCCEEEEC-C---EEEecHHHHHHHHHHHCC
Confidence 344668899999853 3 468887 78899998765
No 169
>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}
Probab=21.43 E-value=71 Score=26.28 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=23.3
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhc
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGC 267 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~ 267 (297)
+..+-.+.|||+..++|. +|++| +|+++|.+.
T Consensus 66 ~~~~P~g~vPvL~~~~g~---~l~eS~aI~~yL~~~ 98 (230)
T 4hz2_A 66 LALNAIGKVPVVVLDDGT---ALRESNAILLHFAEG 98 (230)
T ss_dssp HHHCTTCCSCEEECTTSC---EEECHHHHHHHHHTT
T ss_pred HhhCCCCCCCEEEecCCE---EeeCHHHHHHHHhcc
Confidence 344678899999833443 57887 788999875
No 170
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Probab=21.34 E-value=58 Score=25.81 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=23.6
Q ss_pred hhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 234 SKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 234 sK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
..+-.++|||+..+ | -.|++| +|+++|.+..+
T Consensus 47 ~~~P~g~vP~L~~~-g---~~l~eS~aI~~yL~~~~~ 79 (209)
T 1axd_A 47 VRNPFGQVPALQDG-D---LYLFESRAICKYAARKNK 79 (209)
T ss_dssp TTCTTCCSCEEEET-T---EEEESHHHHHHHHHHHHC
T ss_pred HhCcCCCCCeEEEC-C---EEEecHHHHHHHHHHhcC
Confidence 44668899998753 3 468887 78899987654
No 171
>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ...
Probab=21.23 E-value=66 Score=26.14 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=22.8
Q ss_pred cCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 236 YRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 236 ~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+-.++|||+..+ | -.|++| +|+++|.+..+
T Consensus 49 nP~g~vPvL~~~-g---~~l~eS~aI~~yL~~~~~ 79 (221)
T 1k3y_A 49 LMFQQVPMVEID-G---MKLVQTRAILNYIASKYN 79 (221)
T ss_dssp CTTSCSCEEEET-T---EEEESHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEC-C---EEEecHHHHHHHHHHHcC
Confidence 668999999743 3 468888 78899987654
No 172
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5
Probab=20.93 E-value=52 Score=26.35 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=23.3
Q ss_pred hcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 235 KYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 235 K~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
.+-.++|||+..+ | ..|++| +|+++|.+..+
T Consensus 48 ~~P~g~vP~L~~~-g---~~l~eS~aI~~yL~~~~~ 79 (216)
T 1aw9_A 48 LNPFGQIPALVDG-D---EVLFESRAINRYIASKYA 79 (216)
T ss_dssp TCTTCCSCEEEET-T---EEEESHHHHHHHHHHHTC
T ss_pred hCCCCCcCEEEEC-C---EEeeCHHHHHHHHHHHcC
Confidence 4567899998853 3 367888 78899988765
No 173
>1c1y_B Proto-onkogene serine/threonine protein kinase RAF-1; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: d.15.1.5 PDB: 1gua_B* 1rfa_A 3kud_B* 3kuc_B*
Probab=20.85 E-value=43 Score=25.83 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=24.4
Q ss_pred cCCCCCCCCcEEecCCCCHHHHH-HHHHHCCC
Q 022419 48 SFPNVPGGRVIEIMADTTIPDAV-KILSECNI 78 (297)
Q Consensus 48 SfP~~~~~~VIeI~~d~sI~dAv-kiLse~nI 78 (297)
-+|+. ..-+|++++..|+.||+ |.|...|+
T Consensus 7 hLPn~-QrT~V~VrpG~tlrdaL~KaLk~R~L 37 (77)
T 1c1y_B 7 FLPNK-QRTVVNVRNGMSLHDCLMKALKVRGL 37 (77)
T ss_dssp EETTT-EEEEEECCTTCBHHHHHHHHHHTTTC
T ss_pred ECCCC-ceEEEEecCCcCHHHHHHHHHHHcCC
Confidence 35665 56789999999999997 67777887
No 174
>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}
Probab=20.81 E-value=46 Score=27.46 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=25.0
Q ss_pred HhhcCCceeEEEcCCCCCeeE---EeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKN---YITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~n---iITQS-aVI~~L~~~~g 269 (297)
+..+-.+.|||+..++| ..| +|++| +|+++|.+..+
T Consensus 65 ~~~nP~g~vP~L~~~dg-~dG~~~~l~eS~aI~~yL~~~~~ 104 (244)
T 4ikh_A 65 LSVSPNNKIPAILDPHG-PGDQPLALFESGAILIYLADKSG 104 (244)
T ss_dssp HTTCTTSCSCEEEETTC-GGGCCEEEESHHHHHHHHHHHHT
T ss_pred HhcCCCCCCCEEEecCC-CCCCceeEEcHHHHHHHHHhhCC
Confidence 34466789999976432 122 67887 78899988765
No 175
>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*
Probab=20.73 E-value=52 Score=26.20 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=24.5
Q ss_pred HHhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 232 LLSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 232 LLsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
.+..+-.++|||+..+ | -.|++| +|+++|.+..+
T Consensus 41 ~~~~~P~g~vP~L~~~-g---~~l~eS~aI~~yL~~~~~ 75 (202)
T 2gsq_A 41 LKATMYSNAMPVLDID-G---TKMSQSMCIARHLAREFG 75 (202)
T ss_dssp HGGGSGGGSSCEEEET-T---EEECCHHHHHHHHHHHTT
T ss_pred hcccCCCCCCCEEEEC-C---EEEecHHHHHHHHHHHhC
Confidence 3455678899998743 3 468887 78899987654
No 176
>4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae}
Probab=20.53 E-value=60 Score=26.21 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=24.6
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||+.. +| -.|++| +|+++|.+..+
T Consensus 47 ~~~nP~g~vP~L~~-~g---~~l~eS~aI~~yL~~~~~ 80 (217)
T 4hz4_A 47 KAQHPLGKAPVLQD-GD---LVLAEGNAIIQHLLDRYD 80 (217)
T ss_dssp HTTSTTCCSCEEEE-TT---EEEECHHHHHHHHHHHHC
T ss_pred HhcCCCCCCCEEEE-CC---EeeecHHHHHHHHHHhCC
Confidence 34566889999985 33 357887 78899988776
No 177
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=20.46 E-value=1.1e+02 Score=22.50 Aligned_cols=35 Identities=11% Similarity=0.228 Sum_probs=21.6
Q ss_pred HhhcCCceeE---EEcCCCCCee-EEeehHHHHHHHhhcc
Q 022419 233 LSKYRLRNVP---IIEPGTPDIK-NYITQSAVVQGLEGCK 268 (297)
Q Consensus 233 LsK~rl~rvP---VVd~~~~~i~-niITQSaVI~~L~~~~ 268 (297)
...|+++.+| ++|.+ |+++ +-++...+.+.|.+..
T Consensus 102 ~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDGR-KRVILKDTSMEQLIDYLATQA 140 (142)
T ss_dssp TTCSCCCSSSEEEEECTT-CBEEECSCCHHHHHHHHHC--
T ss_pred HHHcCCCCCCeEEEECCC-CCEEecCCCHHHHHHHHHHHc
Confidence 3467776666 78874 5554 5567777777776554
No 178
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=20.03 E-value=72 Score=25.68 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=24.5
Q ss_pred HhhcCCceeEEEcCCCCCeeEEeehH-HHHHHHhhccC
Q 022419 233 LSKYRLRNVPIIEPGTPDIKNYITQS-AVVQGLEGCKG 269 (297)
Q Consensus 233 LsK~rl~rvPVVd~~~~~i~niITQS-aVI~~L~~~~g 269 (297)
+..+-.++|||...+ | .+|++| +|+++|.+..+
T Consensus 44 ~~~nP~g~vPvL~~~-~---~~l~ES~aI~~yL~~~~~ 77 (210)
T 4hoj_A 44 AVMNPYNQVPVLVER-D---LVLHESNIINEYIDERFP 77 (210)
T ss_dssp HHHCTTCCSCEEEET-T---EEEESHHHHHHHHHHHSC
T ss_pred HHHCCCCCCcEEEEC-C---EEEeccHHHHHHHHHhcc
Confidence 445678999999864 3 358888 68899987654
Done!