BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022420
(297 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/245 (73%), Positives = 198/245 (80%), Gaps = 9/245 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ+INSKEA LGIS++ASWHAKYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRIQNINSKEAALGISEEASWHAKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VD NLVRDKGTGK +GFAF+AYEDQRST LAVDNLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDANLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVTKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEET Q+ RE RGVC AFQRGEC RG GC+FSH+EQRAANTG G QD+SSRWGHE F+G
Sbjct: 121 EDEETAQQKREARGVCHAFQRGECNRGAGCRFSHDEQRAANTGWGAQDKSSRWGHEMFDG 180
Query: 181 FSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSR 237
S S + E +P Q+DRREEKRS HD E KPRED+ RREDK+ R
Sbjct: 181 ------PKKSEERSSYNMPSESHPKQNDRREEKRSRWHDDNEIVQKPREDYNRREDKKLR 234
Query: 238 RHSDN 242
R D+
Sbjct: 235 RLEDD 239
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/264 (62%), Positives = 196/264 (74%), Gaps = 22/264 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q IN++E+DLGIS++ASWHAKYK+SAYVYVG IPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTQVKNLQKINARESDLGISEEASWHAKYKNSAYVYVGCIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNL+RDKGTGK +GFAF+AYEDQRST+LAVDNLNGA +LGRTI+VDH +YKK EE
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNLNGALVLGRTIKVDHCREYKKHEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEKFE 179
EDEETR++ RE RGVCRAFQRGECTRGD CKFSH+E+RAANTG G +DRSSRW H+KF
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSRWDHDKFN 180
Query: 180 G-------------FSWGKNDSSSRATGSGRVALEGNPNQSDRRE-EKRSIR----HDHR 221
G F + S R G G A G P + +R E E R +D R
Sbjct: 181 GAKKGGTSFGHRGDFKSDAEEKSYRGKGDGD-AWYGRPKERERVEREDMGPRSRDAYDMR 239
Query: 222 EKPREDHGRREDKRSRRHSDNNEF 245
E+ R G +D RSR H+ N++
Sbjct: 240 EQKRS--GPYDDSRSRSHNAGNDY 261
>gi|15232729|ref|NP_190296.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
gi|75337070|sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=AtC3H42
gi|6522593|emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana]
gi|27311733|gb|AAO00832.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|34098859|gb|AAQ56812.1| At3g47120 [Arabidopsis thaliana]
gi|332644724|gb|AEE78245.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
Length = 352
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 162/178 (91%), Gaps = 1/178 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q IN++E+DLGISD+ASWHAKYK+SAYVYVGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNL+RDKGTGK +GFAF+AYEDQRSTILAVDNLNGA +LGRTI+VDH YKK EE
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEK 177
EDEETR++ RE RGVCRAFQRGECTRGD CKFSH+E+RAANTG G +DRSS+W H+K
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDK 178
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/337 (56%), Positives = 217/337 (64%), Gaps = 66/337 (19%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNLVRDKGTGK +GFAFVAYEDQRST LAVDNLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKF-- 178
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQRA+NTG G +D+SSRWGH+KF
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG 180
Query: 179 ----------------------EGFSWGKNDS-SSRATGS--GRVA-------------- 199
EG +G D+ SSR GS GR +
Sbjct: 181 STKSDGRPNSIPTNRVHEPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQDG 240
Query: 200 -------------LEGNPNQSDRREEKRSIRHDHREKPREDHGRR--------EDKRSRR 238
L +Q R E+RS R D P EDH RR ++RSRR
Sbjct: 241 RGLERQMEQKEKELNYKEDQDRRTTERRSGRPD--SNPGEDHDRRGEDQDIRATERRSRR 298
Query: 239 HSDN--NEFEARSREDHYRRDEKRPKRHESESYLRED 273
H N + + R + R E+R +RH+ ES RED
Sbjct: 299 HDSNPSEDHDRRGEDQDIRATERRSRRHDFESNPRED 335
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 12/111 (10%)
Query: 195 SGRVALEGNPNQSDRREEKR--------SIRHDHREKPREDHGRREDKRSRRHSDNNEFE 246
S R E NP + DR+EE R S R + PREDH RRE+KRSRRH E E
Sbjct: 323 SRRHDFESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRSRRH----ELE 378
Query: 247 ARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 297
++ +EDH RR+EK+ +RHESESYLRED GDK S D++SHRHRER
Sbjct: 379 SKPKEDHDRREEKQSRRHESESYLREDPRDERGDKRSGHSRDTASHRHRER 429
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/292 (62%), Positives = 211/292 (72%), Gaps = 16/292 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNLVRDKGTGK +GFAFVAYEDQRST LAVDNLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQRA+NTG G +D+SSRWGH+KF+G
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG 180
Query: 181 FSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHDHREKPREDHGRREDKRSR- 237
+ K+D + + RV E + R ++ RS R E RE H RR + R
Sbjct: 181 ST--KSDGRPNSIPTNRVH-EPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRD 237
Query: 238 -------RHSDNNEFEARSREDHYRR-DEKRPKRHESESYLREDQDRRGGDK 281
R + E E +ED RR E+R R +S ED DRRG D+
Sbjct: 238 QDGRGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNPG--EDHDRRGEDQ 287
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/305 (58%), Positives = 216/305 (70%), Gaps = 38/305 (12%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS++ASWHAKYKDSAYV+VGGIP+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNL+RDKGTGK +G+AFVAYEDQRST LAVDNLNGAQILGR +RVDHV+KYKKKEE
Sbjct: 61 EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEKFE 179
EDEE Q+ RE RGVCRAFQRGECTRG GCKFSH+EQRAA+TG G +D SS+WGH+KF+
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
Query: 180 GFSWGKNDSSSRATG--------------SGRVALEGNPNQSDRREEKRSIRHDHREKPR 225
S +D A G SG + E P D +E K R
Sbjct: 181 --SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESEL-------KSR 231
Query: 226 EDHGRREDKRSRRHSDNNEFEARSREDHY--------------RRDEKRPKRHESESYLR 271
EDHG +++KRSRR+ + + +S +D Y R+DEKR ++H+++ ++
Sbjct: 232 EDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMK 291
Query: 272 EDQDR 276
+ DR
Sbjct: 292 LEDDR 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 209 RREEKRSIRHDHREKP----REDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 264
R+EE R R+ E P R+ R ED+ S+RH D E+ + RED RR+ RH
Sbjct: 298 RKEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDK-EYPPKLREDDKRRERDVSVRH 356
Query: 265 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 297
SESY RE+ D + +SS G DSSSH HRER
Sbjct: 357 RSESYRRENPDEKRDYRSSHGGRDSSSHSHRER 389
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/331 (56%), Positives = 221/331 (66%), Gaps = 56/331 (16%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKR Q+IN++EA LGI + ASWH KYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRST LAVDNLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEET ++ RE RGVCRAFQRGECTRG CKFSH+EQRAANTG G ++ +WGH+KF+G
Sbjct: 121 EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFDG 180
Query: 181 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDR---------------- 209
G N DS SRA + L+ P +SDR
Sbjct: 181 PKKERRSGNNQSNHIAETRDRDSFSRARNND-AELDNQPKRSDRKEMTKREYRYKREEKG 239
Query: 210 ------------------REEKRSIRHDHRE-KPRE-DHGRREDKRSRRHSDNNEFEARS 249
REEKRSI+ D E +P+ D REDKRSRR DN++ ++S
Sbjct: 240 SRRDDYDGMKLEPKDHHLREEKRSIKPDDVEVEPKSRDSDIREDKRSRRR-DNDDIVSKS 298
Query: 250 REDHYRRDEKRPKRH---ESESYLREDQDRR 277
RE H ++++ ++H ES RED DR+
Sbjct: 299 REPHGYSEDRKSRKHSEGESAPKPREDYDRK 329
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 198 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 254
V +E SD RE+KRS R D+ + K RE HG ED++SR+HS+ E + RED+
Sbjct: 269 VEVEPKSRDSDIREDKRSRRRDNDDIVSKSREPHGYSEDRKSRKHSE-GESAPKPREDYD 327
Query: 255 RRDEKRPKR---HESESYLREDQDRR 277
R+ +KR R +++ES R DRR
Sbjct: 328 RKQDKRSYRNYSNQTESKERYAFDRR 353
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/277 (62%), Positives = 205/277 (74%), Gaps = 20/277 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA L IS+DASWH KYKDSAYV+VGGIPFD TEGD++AVFAQ G
Sbjct: 1 MNPLTLVKRIQQINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDVIAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VD+NLVRDKGTGK +GFAF+AYEDQRST LAVDNLNGAQ+ GR IRVDHV KYKK EE
Sbjct: 61 EVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGRIIRVDHVDKYKKMEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEE ++ RE RGVCRAFQRGECTRG GCKFSH+EQRAANTG G + ++ ++K++G
Sbjct: 121 EDEEEAKQKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWG-DNGIAKGDNDKYDG 179
Query: 181 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREK-- 223
+G N DS SRA G+G + L+ +SDRREEK R D
Sbjct: 180 PKKERRYGNNQPDRIPETRDRDSRSRAHGNG-MELDNPSKRSDRREEKMLRRQDGDGNFV 238
Query: 224 PREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKR 260
RE+ RRE+KR R + D +EFE RED +RR+EKR
Sbjct: 239 GRENTSRREEKRPRDYKD-DEFEQWPREDRHRREEKR 274
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 198 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 254
V E SD RE+KR R D + K RE G RE++RSR+H+D +E RSREDH
Sbjct: 302 VKFEPKSRDSDLREDKRPSRRDVDDFGSKSRETQGSREERRSRKHTD-DESMPRSREDHD 360
Query: 255 RRDEKRPKRHE---SESYLREDQDRR 277
R+ + R + SES R D DRR
Sbjct: 361 RKQDNRSYHKDADRSESKGRNDSDRR 386
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/311 (58%), Positives = 211/311 (67%), Gaps = 35/311 (11%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVNLVRDKGTGK +GFAFVAYEDQRST LAVDNLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ-------------------RAAN 161
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQ RA+N
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQDLTFSWLSKSWRLVLQGLERASN 180
Query: 162 TGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHD 219
TG G +D+SSRWGH+KF+G + K+D + + RV E + R ++ RS R
Sbjct: 181 TGWGSEDKSSRWGHDKFQGST--KSDGRPNSIPTNRVH-EPTVGEGHRFGNKDARSSRTK 237
Query: 220 HREKPREDHGRREDKRSR--------RHSDNNEFEARSREDHYRR-DEKRPKRHESESYL 270
E RE H RR + R R + E E +ED RR E+R R +S
Sbjct: 238 GSEGGRESHHRRSELDIRDQDGRGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNP-- 295
Query: 271 REDQDRRGGDK 281
ED DRRG D+
Sbjct: 296 GEDHDRRGEDQ 306
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 205 NQSDRREEKRSIRHDHREKPREDHGRREDK---RSRRHSDNNEFEARSREDHYRRDEKRP 261
+Q R E+RS RHD PRED + ED+ + R S +EFE+ REDH RR+EKR
Sbjct: 332 DQDIRATERRSRRHDFESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRS 391
Query: 262 KRHESES 268
+RHE ES
Sbjct: 392 RRHELES 398
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/229 (68%), Positives = 177/229 (77%), Gaps = 16/229 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKR Q+IN++EA LGI + ASWH KYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRST LAVDNLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEET ++ RE RGVCRAFQRGECTRG CKFSH+EQRAANTG G ++ +WGH+KFEG
Sbjct: 121 EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFEG 180
Query: 181 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDRREEKR 214
G N DS +RA L+ P +SDRRE KR
Sbjct: 181 PKKERRSGNNQSNHIPETRDRDSRTRARNFD-AELDNQPKKSDRRETKR 228
>gi|297793411|ref|XP_002864590.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
gi|297310425|gb|EFH40849.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/171 (76%), Positives = 148/171 (86%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK+ Q IN+KE DLGISD+ASWHAKYKDSAYVYVG + +DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTMVKQTQRINAKELDLGISDEASWHAKYKDSAYVYVGELLYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNL RDKGTGK +GFAFVAYEDQRST LAVDNLNGA++LGR I+V+H KY K+EE
Sbjct: 61 EVVDVNLARDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAKVLGRIIKVEHCGKYSKREE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSS 171
+DEET+ + RE RGVCRAFQR ECTRGDGCKFSH+E R ANTG G +DR S
Sbjct: 121 DDEETKHKKREARGVCRAFQRKECTRGDGCKFSHDENRGANTGWGHEDRRS 171
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LG+S+DASWHAK+KDSAYV+VGG+P+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFKDSAYVFVGGVPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDK TGK +GFAFVAYEDQRST+LAVDNLNGA++LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHVDKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 177
EDE+ Q+ REERGVC AFQ+GEC RGD C++SH+EQR ANTG G +D + +W H++
Sbjct: 121 EDEDELQKKREERGVCYAFQKGECNRGDACRYSHDEQRNANTGWGSKEDINPKWEHDR 178
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 32/180 (17%)
Query: 131 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSR----------WGHEKFE 179
+ RG+C AFQ+GEC RG C+FSH+E+R A+ G +DR++R H+KF
Sbjct: 217 QARGICYAFQKGECNRGASCRFSHDEERNADAGRSSKEDRNARRDQDRHLDPPKSHKKFP 276
Query: 180 GFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS-RR 238
S++ + R E P + + + + D R HG R K S RR
Sbjct: 277 S-------SAADQSFPDRTEEESRPANREGQSSRSEVYRDR--DSRVKHGDRSTKDSDRR 327
Query: 239 HSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTG----RGDSSSHRH 294
H + E RSR + +R D+ R+ E R + R D+ S G RGD + R+
Sbjct: 328 HEKSPE---RSRGERHRSDD----RYMQEREERSESKRSRNDRDSGGRYERRGDEEAERY 380
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LG+S+DASWHAK++ SAYV+VGG+PFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFRGSAYVFVGGVPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDK TGK +GFAFVAYEDQRST+LAVDNLNGA++LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHVEKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
EDEE Q+ REERGVC AFQ+GEC RGD CK+SH+EQR ANTG G ++ +W H++ G
Sbjct: 121 EDEEELQKKREERGVCYAFQKGECNRGDACKYSHDEQRNANTGWGSKEDDPKWEHDRHRG 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query: 133 RGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSR 172
RGVC AFQ+GEC+RG C+FSH+EQR ANT DR SR
Sbjct: 218 RGVCYAFQKGECSRGASCRFSHDEQRNANT-----DRGSR 252
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQIINQKEAILGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRSTILAVDNLNGA++LGR I+VDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 177
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRSTILAVDNLNGA++LGR I+VDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 177
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/319 (53%), Positives = 208/319 (65%), Gaps = 33/319 (10%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +D SWHAK+KDSAYV+VGGIP+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRSTILAVDNLNGA++LGR +RVDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRS-SRW------ 173
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G ++ S +RW
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH 180
Query: 174 ----GHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRRE--EKRSIRHDHREKPRED 227
H+KF S G+ RA + G QS R E + R R H ++ +D
Sbjct: 181 EPPMSHKKFPS-SAGEQRFPDRAKEENKST--GREGQSSRSEAYKDRDSRLRHSDRGSKD 237
Query: 228 HGR----REDKRSR--RHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDK 281
H R R +RSR R +N+ + RDEK + + DQ R D
Sbjct: 238 HDRYRHDRSPERSRGDRQRNNDRYAQG-------RDEKSERYRSEVKHDEGDQKRSRRDT 290
Query: 282 SSTG----RGDSSSHRHRE 296
S+G RG+ S R+R+
Sbjct: 291 DSSGHYERRGNEDSERYRK 309
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 195/281 (69%), Gaps = 11/281 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK +GFAF+AYEDQRSTILAVDNLNGA++LGR IRVDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIRVDHVSKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEKFE 179
EDEE +Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEEQQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDKHS 180
Query: 180 GFSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHDHREKPREDHGRREDKRSR 237
SR E N S + +E+R++ ++R+ R+ R ++
Sbjct: 181 DVP------KSRGMCYAFQKGECNRGASCKFSHDEQRNV--NNRQSSRDGEPSRSERYGD 232
Query: 238 RHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRG 278
R S + + R+ + R + P+R E +D+ RG
Sbjct: 233 RESRSRHDDRRAEDRDRYRRDNSPERLRGERQRNDDRSDRG 273
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/183 (69%), Positives = 150/183 (81%), Gaps = 3/183 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK Q I ++E +GISD+ SWHAKYKDSAY+YVGG+ F LTEGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNTQKITAREQAIGISDEGSWHAKYKDSAYIYVGGLSFGLTEGDVLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDK TGK +GFAF+AYEDQRST+LAVDNLNGA++ R I+VDHV+ YK+K E
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFLAYEDQRSTVLAVDNLNGARVDSRIIKVDHVSDYKRKLE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG---GGPQDRSSRWGHEK 177
EDEE +QR REERGVC AFQRGEC RGD CKFSH+EQR +NTG GG + W H++
Sbjct: 121 EDEEEKQRKREERGVCYAFQRGECKRGDDCKFSHDEQRNSNTGWGEGGSRKDGGSWKHDQ 180
Query: 178 FEG 180
F+G
Sbjct: 181 FDG 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 122 DEETRQRMREERGVCRAFQRGECTRGDGCKFSHN 155
D+ +R + RGVC AFQRGEC RGDGCKF+H+
Sbjct: 201 DDGMNEREDKPRGVCYAFQRGECNRGDGCKFAHD 234
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 123/157 (78%), Positives = 135/157 (85%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP T VKR Q+IN++EA L I D ASWH KYKDSAY++VGGIPFDLTEGDLL VFAQ G
Sbjct: 1 MNPPTLVKRTQNINAREAALSIGDHASWHTKYKDSAYIFVGGIPFDLTEGDLLPVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRDKGTGK + FAF+AYEDQRS LAVDNLNGAQ+LGR I+VDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKDFAFLAYEDQRSADLAVDNLNGAQVLGRIIKVDHVDKYKKKEE 120
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 157
EDEET + RE RGVCRAFQRGECTRG CKFSH+EQ
Sbjct: 121 EDEETERLKREARGVCRAFQRGECTRGASCKFSHDEQ 157
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE DEETR+
Sbjct: 121 SEEVDEETRK 130
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 118 KEEEDEETRQ 127
EE D+ TR+
Sbjct: 141 SEEMDDVTRE 150
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 118 KEEEDEETRQ 127
EE D+ TR+
Sbjct: 141 SEEMDDVTRE 150
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA+V++GG+P++LTEGD++ VF+Q G
Sbjct: 75 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWVFLGGLPYELTEGDIICVFSQYG 134
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 135 EVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 194
Query: 118 KEEEDEETRQRMREERGV 135
EE D+ TR+ + GV
Sbjct: 195 SEELDDVTRELQEKGCGV 212
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+PF+LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWIFIGGLPFELTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
E+V++NL RDK +G+ RGF FV +EDQRST+LAVDNLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLARDKSSGRSRGFCFVCFEDQRSTVLAVDNLNGIKLKGRTIRVDHVANYRPPKD 120
Query: 119 EEEDEETRQRMRE 131
E+ +E Q +RE
Sbjct: 121 AEDIDEITQTLRE 133
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LG+ D SWH++Y DSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGVQDKVSWHSEYNDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKD 120
Query: 119 EEEDEETRQRMRE 131
E+ +E + +RE
Sbjct: 121 SEDIDEVTKTLRE 133
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 118 KEEEDEETRQ 127
EE D+ +R+
Sbjct: 141 SEEMDDVSRE 150
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHVA Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120
Query: 121 -EDEETRQRMREERGV 135
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKGC 136
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 102/123 (82%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 53 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYG 112
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+ +E
Sbjct: 113 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKE 172
Query: 121 EDE 123
DE
Sbjct: 173 SDE 175
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADTVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKE 119
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+ KE
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRTPKE 120
Query: 120 EEDEETRQRMREERGV 135
E+ + + +E+G
Sbjct: 121 SEEMDIVTKELQEKGC 136
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 109/138 (78%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E +LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVELGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 140
Query: 119 -EEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 141 SEEMDEVTRE--LQERGC 156
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 109/134 (81%), Gaps = 2/134 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EADLG+++ SWH++Y+DSA+++VGG P++LTEGDLL VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREADLGVNEKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV+VNLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNVNLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKNYRPPKD 120
Query: 119 EEEDEETRQRMREE 132
E+ ++ +R+RE+
Sbjct: 121 GEDIDDVTKRLRED 134
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 102/128 (79%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K IQ +E + G D ASWHAKYK SAY++ GG+ +DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQIKNIQKATKREIETGTQDSASWHAKYKHSAYIFAGGLDYDLTEGDLLAVFAQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VD+NL+RDK +GK +GFAFVAYEDQRST+LA DN NGA++ GRTIRV+HV YKK++
Sbjct: 61 EVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNFNGAKVAGRTIRVEHVDNYKKRKA 120
Query: 121 EDEETRQR 128
E E+ R
Sbjct: 121 EVRESDAR 128
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ T++
Sbjct: 121 LEEIDDMTKE 130
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 10 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 69
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 70 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 129
Query: 118 KEEEDEETRQ 127
EE D+ T++
Sbjct: 130 LEEIDDMTKE 139
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 102/123 (82%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+ ++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 121 EDE 123
+E
Sbjct: 121 SEE 123
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQRMREERGV 135
EE D+ T++ +ERG
Sbjct: 121 SEETDDVTKE--LQERGC 136
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 107/134 (79%), Gaps = 2/134 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EADLG+ + SWH++YKDSA+V++GG P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 119 EEEDEETRQRMREE 132
E+ ++ + +REE
Sbjct: 121 SEDIDDVTKILREE 134
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YK SA+++VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 121 -EDEETRQRMREERGV 135
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKGC 136
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ T++
Sbjct: 121 SEEMDDVTKE 130
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
E+V++NLVRDK +G+ RGF F+ +EDQRST+LAVDNLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 119 EEEDEETRQRMRE 131
E+ +E Q +RE
Sbjct: 121 AEDIDEITQSLRE 133
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 108/138 (78%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 99 MNPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 158
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 159 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLPED 218
Query: 119 -EEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 219 SEEMDEVTRE--LQERGC 234
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
E+V++NLVRDK +G+ RGF F+ +EDQRST+LAVDNLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 119 EEEDEETRQRMRE 131
E+ +E Q +RE
Sbjct: 121 AEDIDEITQSLRE 133
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 118 KEEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 2/134 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LG+++ SWH++YKDSA+++VGG P++LTEGDL+ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREASLGVNESVSWHSEYKDSAWIFVGGFPYELTEGDLICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 119 EEEDEETRQRMREE 132
E+ ++ + +REE
Sbjct: 121 GEDIDDVTKHLREE 134
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG ++ GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 118 KEEEDEETRQRMREERGV 135
EE D+ T++ + RG
Sbjct: 121 SEEMDDVTKELHKGSRGA 138
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 95/116 (81%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LGI + SWH+ YK+SA+V++GG P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EI ++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 8 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 67
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 68 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 127
Query: 118 KEEEDEETRQ 127
EE D+ T++
Sbjct: 128 SEETDDVTKE 137
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKK 118
IV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 119 EEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 EEMDDVTRQ 129
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG ++ GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 118 KEEEDEETRQRMREERGV 135
EE D+ T++ + RG
Sbjct: 121 SEEMDDVTKELHKGSRGA 138
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKK 118
IV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 119 EEEDEETRQ 127
EE D+ TRQ
Sbjct: 121 EEIDDVTRQ 129
>gi|302806382|ref|XP_002984941.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
gi|300147527|gb|EFJ14191.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
Length = 130
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 98/112 (87%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q I ++E+ GI++ ASWHA+YKDSAY++ GG+ ++L EGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
E+VDVNL+RDKGTGK +G+ F+AYEDQRST LAVDNLNGAQ+ GRT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|302794524|ref|XP_002979026.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
gi|300153344|gb|EFJ19983.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
Length = 130
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 98/112 (87%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q I ++E+ GI++ ASWHA+YKDSAY++ GG+ ++L EGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
E+VDVNL+RDKGTGK +G+ F+AYEDQRST LAVDNLNGAQ+ GRT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 106/138 (76%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+ + SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLV DK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 119 -EEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 121 SEEMDEVTRE--LQERGC 136
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 111/141 (78%), Gaps = 6/141 (4%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 183 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 242
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKK 118
IV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y K
Sbjct: 243 IVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 302
Query: 119 EEEDEETRQRMREERGVCRAF 139
EE D+ T++ +E+G C AF
Sbjct: 303 EEMDDMTKE--LQEKG-CGAF 320
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 107/132 (81%), Gaps = 2/132 (1%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
PLT VK I +N EA G+S ASWH +YKDSAY+++GG+PF+LTEGD+L VF+Q GEI
Sbjct: 29 PLTNVKNINKLNELEAQYGVSSTASWHQQYKDSAYIFIGGMPFELTEGDVLCVFSQYGEI 88
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK--EE 120
V++NLVRDK TGK +G+ F+AYEDQRSTILAVDN NG ++ GRT+RVDHV++Y+K +E
Sbjct: 89 VNINLVRDKKTGKSKGYCFIAYEDQRSTILAVDNFNGIKLKGRTLRVDHVSEYRKPKDDE 148
Query: 121 EDEETRQRMREE 132
E ++ +++REE
Sbjct: 149 ELDDATKKLREE 160
>gi|391339259|ref|XP_003743969.1| PREDICTED: uncharacterized protein LOC100902788 [Metaseiulus
occidentalis]
Length = 322
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 2/143 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNPLT V+ +Q IN +E +G++ + SWH+KYK+SA++Y GG+ FDLTEGDLL +F+Q
Sbjct: 1 MNPLTNVRNLQKINDRELQMGLTGHEKSWHSKYKNSAWIYFGGVSFDLTEGDLLCIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GEIV++NLVRDK TGK RGF F+ YEDQRSTILA+DN NGA+I RT RVDHV YK +
Sbjct: 61 GEIVNINLVRDKETGKSRGFGFICYEDQRSTILAIDNFNGAKICNRTFRVDHVENYKPPK 120
Query: 120 EEDE-ETRQRMREERGVCRAFQR 141
+ DE + +M E+G R
Sbjct: 121 DSDEYDELTKMLHEKGCAPEVMR 143
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 95/116 (81%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LGI + SWH+ YK+SA+V++GG P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EI ++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|395509895|ref|XP_003759222.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Sarcophilus
harrisii]
Length = 274
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG++++ SWHA+YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLISELNQREVELGLTENVSWHAEYKDSAWIFIGGLPYELTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKE 119
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHVA Y+ K+
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIRGRTIRVDHVANYRPPKD 120
Query: 120 EEDEETRQRMREERGVC 136
+ + RM +G C
Sbjct: 121 SRNLDDVTRMLRGKGHC 137
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE+V
Sbjct: 1 LTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKEEED 122
++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+ K+ E+
Sbjct: 61 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 120
Query: 123 EETRQRMREERGV 135
+ R+ +E+G
Sbjct: 121 MDDVTRVLQEKGC 133
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
PLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q GE+
Sbjct: 14 PLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEV 73
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KKEE 120
V++NLVRDK +G+ RGF F+ +EDQRST+LAVDNLNG ++ GRTIRVDHVA Y+ K E
Sbjct: 74 VNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKDAE 133
Query: 121 EDEETRQRMRE 131
+ +E Q +RE
Sbjct: 134 DIDEITQSLRE 144
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YK SA+++VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 121 -EDEETRQRMREERG 134
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKG 135
>gi|307108981|gb|EFN57220.1| hypothetical protein CHLNCDRAFT_14185, partial [Chlorella
variabilis]
Length = 116
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 97/116 (83%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K Q I E +LG++D ASWH ++K SAYV+ GG+PF+LTEGDLLAVFAQ G
Sbjct: 1 MNPLTQIKNTQKITKAEIELGLTDKASWHDRFKHSAYVFSGGLPFELTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E+VDV+LVRDK TGK RGFAF+AYEDQRST+LAVDNL GA++ GR IRV+HV Y+
Sbjct: 61 EVVDVHLVRDKKTGKSRGFAFLAYEDQRSTVLAVDNLGGARVAGRVIRVEHVDNYR 116
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 100/120 (83%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG+++ SWHA+YKDSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNSLTKVKLINELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+ ++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 105/138 (76%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
+PLT+VK I +N +E LG+ + SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 88 FSPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 147
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLV DK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 148 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 207
Query: 119 -EEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 208 SEEMDEVTRE--LQERGC 223
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 101/127 (79%), Gaps = 3/127 (2%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
L +VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GEIV
Sbjct: 16 LQEVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIV 75
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKKEE 120
++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y K EE
Sbjct: 76 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 135
Query: 121 EDEETRQ 127
D+ TRQ
Sbjct: 136 MDDVTRQ 142
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 105/136 (77%), Gaps = 3/136 (2%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
PLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE+
Sbjct: 105 PLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYGEV 164
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKKE 119
V++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y K E
Sbjct: 165 VNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRVPKVSE 224
Query: 120 EEDEETRQRMREERGV 135
+ D+ TR+ GV
Sbjct: 225 DMDDVTRELQAMGCGV 240
>gi|126324409|ref|XP_001377779.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 198
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 99/120 (82%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG+++ SWHA+YKDSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNSLTKVKLISELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK T K +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+ ++
Sbjct: 61 EIVNINLVRDKKTRKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +EADLG+ + SWH++YKDSA+V++GG P++L+EGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKEE 120
IV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRT+RVDHV Y+ K+
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTLRVDHVKDYRPPKDS 120
Query: 121 EDEETRQRMREERG 134
ED + +M E G
Sbjct: 121 EDIDDVTKMLREEG 134
>gi|145348674|ref|XP_001418770.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579000|gb|ABO97063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 122
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 98/122 (80%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ+K Q +E + G+ ++ASWHA+YK SAYVY GG+ F++TEGD+LAVF+Q G
Sbjct: 1 MNALTQIKNTQKATMREIESGMGEEASWHARYKHSAYVYAGGLAFNMTEGDILAVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+VDVNLVRD+ G+ RGFAF+ Y DQRST+LAVDNLNGA ++GRTI+VDHV YK K E
Sbjct: 61 EVVDVNLVRDEEKGRSRGFAFICYADQRSTVLAVDNLNGATVVGRTIKVDHVDDYKMKNE 120
Query: 121 ED 122
+D
Sbjct: 121 DD 122
>gi|440898620|gb|ELR50076.1| RNA-binding motif protein, X-linked 2, partial [Bos grunniens
mutus]
Length = 330
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 105/138 (76%), Gaps = 5/138 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
+PLT+VK I +N +E LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q
Sbjct: 1 FSPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYR 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK---K 117
EIV++NLV DK TGK +GF F+ YEDQRSTILAVD+ NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 118 KEEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 121 SEEMDEVTRE--LQERGC 136
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK+I+ ++ EA+ + +ASWH++YKDS+++++GG+P++LTEGD+L VF+Q G
Sbjct: 1 MNPLTKVKQIKQLSELEAEHSVVAEASWHSQYKDSSWIFLGGLPYELTEGDILCVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLVR++ TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVRNRKTGKSKGFCFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSSYRPPRA 120
Query: 119 -EEEDEETRQ 127
E+ D+ TR+
Sbjct: 121 SEDVDDMTRE 130
>gi|198436817|ref|XP_002127336.1| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Ciona
intestinalis]
Length = 377
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 109/139 (78%), Gaps = 4/139 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MN LT+++ I +N+KE G++ +SWH +YKDSA+VYVG +PF+L+EGD++ V +Q
Sbjct: 1 MNVLTKIRLINELNAKELRSGVAGTSSSWHNQYKDSAWVYVGSLPFELSEGDVICVMSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GE+V++NL+RD+ TGK +GFAFV YEDQ+STILAVDNLNG++I GR +RVDHV Y+ +
Sbjct: 61 GEVVNINLIRDRKTGKSKGFAFVCYEDQKSTILAVDNLNGSKIKGRQMRVDHVLAYQVPK 120
Query: 120 EEDE--ETRQRMREERGVC 136
E+DE E +R+R ERGV
Sbjct: 121 EDDEVDEVTERIR-ERGVA 138
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 105/134 (78%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL + +SWH +YK SA+++VGG+P+DLTEGD+L VF+Q G
Sbjct: 1 MNPMTNMKNVTKLS--EQDLKLGGKSSWHDQYKSSAWIFVGGLPYDLTEGDVLCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
EIV+VNLVRDK TGK +GFAF+ YEDQRST+LAVDNLNG +++G+T+RVDHV Y K+
Sbjct: 59 EIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKE 118
Query: 118 KEEEDEETRQRMRE 131
++ D+ETRQ E
Sbjct: 119 TDKTDDETRQLYME 132
>gi|312072049|ref|XP_003138888.1| hypothetical protein LOAG_03303 [Loa loa]
gi|307765946|gb|EFO25180.1| hypothetical protein LOAG_03303 [Loa loa]
Length = 312
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT +++ IN +E LG S SWH KY +SA++YVGG+PFDL EGD++AVF+Q
Sbjct: 1 MNPLTNIRKQNKINERELLLGFTGSSSKSWHQKYSNSAWIYVGGLPFDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
GEIV++NL+RD+ TGK RGFAFV YEDQRSTILAVDN NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 119 ---EEEDEETRQ 127
E+ DEETR+
Sbjct: 121 KYHEDIDEETRK 132
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 110/148 (74%), Gaps = 4/148 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNPLT V+ I +N ++ GI D + +WH++YKDSA++++GG+P+DLTEGD+LAVF+Q
Sbjct: 1 MNPLTNVRNIGKLNDQDLQNGIFDHNLTWHSQYKDSAFIFIGGLPYDLTEGDVLAVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--K 117
GEIV++NLVRDK TGK +G+ F+ YEDQRSTILAVDN NG ++ GRTIRVDHV +Y+ K
Sbjct: 61 GEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHVGEYRPPK 120
Query: 118 KEEEDEETRQRMREERGVCRAFQRGECT 145
+E+DE + + + E C CT
Sbjct: 121 GDEKDESGKYKDKVEVS-CAPRTPSPCT 147
>gi|170572253|ref|XP_001892040.1| RNA binding motif protein [Brugia malayi]
gi|158603075|gb|EDP39148.1| RNA binding motif protein, putative [Brugia malayi]
Length = 168
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S+ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
GEIV++NL+RD+ TGK RGFAFV YEDQRSTILAVDN NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 119 ---EEEDEETRQRMRE 131
E+ DEETR+ + +
Sbjct: 121 KYHEDIDEETRKILED 136
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LG+++ SWH KYKDSA++++GG+ + LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKE 119
E+V++NL+RDK TGK +G+ F+ YEDQRST+L+VDNLNG + RTIRVDHV Y+ K+
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISLCKRTIRVDHVENYRPPKD 120
Query: 120 EED 122
ED
Sbjct: 121 SED 123
>gi|402582034|gb|EJW75980.1| Rbmx2 protein, partial [Wuchereria bancrofti]
Length = 147
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S++ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIREQNKINDRELLLGFTGSNNKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
GEIV++NL+RD+ TGK RGFAFV YEDQRSTILAVDN NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 119 ---EEEDEETRQ 127
E+ DEETR+
Sbjct: 121 KYHEDIDEETRK 132
>gi|302854208|ref|XP_002958614.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
gi|300256075|gb|EFJ40351.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
Length = 134
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 6 QVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
Q+K Q +E + GI D ASWHA++K SAYV+ GG+ ++LTEGDLLAVF+Q GEIVD+
Sbjct: 1 QIKNTQKATKREIEAGIQDSASWHAQFKHSAYVFAGGLDYELTEGDLLAVFSQYGEIVDL 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEET 125
NL+R K TGK +GFAF+AYEDQRSTILAVDNLNGA+++GRTIRV+HV YKK++ E
Sbjct: 61 NLIRHKDTGKSKGFAFIAYEDQRSTILAVDNLNGAKVVGRTIRVEHVDNYKKRKAEVRLA 120
Query: 126 RQRMR 130
+ + R
Sbjct: 121 KLKAR 125
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 93/115 (80%), Gaps = 2/115 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I IN +E +LG+ SWH +YKDSAY+YVGG+PF+LTEGDL+ +F+Q GEI+
Sbjct: 1 MNTIREINRINERELELGVK--GSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
DVNLVRDK TGK RGF F+ YEDQRST+LAVDN+NG Q++GRT++VDH Y+++
Sbjct: 59 DVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVIGRTLKVDHTRNYRQQ 113
>gi|308806371|ref|XP_003080497.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116058957|emb|CAL54664.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 252
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ++R Q IN +E G ASWH +++ SAYVY GG+PF LTEGD+L VF+Q G
Sbjct: 1 MNALTQIQRTQKINVEEVASGRDVSASWHDQFRHSAYVYAGGLPFALTEGDVLCVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDVN+VR++ TGK RGFAFV Y DQRST+LAVDNLNG+ + GR IRV+HV Y+ K
Sbjct: 61 EIVDVNVVREEETGKSRGFAFVCYADQRSTVLAVDNLNGSTVGGRIIRVEHVDDYRAKNP 120
Query: 121 EDEETRQRMREERGVC 136
E++E R+ RE + C
Sbjct: 121 EEKEGREVEREWKCAC 136
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 99/130 (76%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ ++ E IS ASWH +YKDSA++++GG+P++L+EGD++ +F+Q G
Sbjct: 1 MNPLTNVKNIKKLSETELKYNISGKASWHYQYKDSAWIFIGGLPYELSEGDIICIFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+ ++NLVRDK TGK +GF F+ YEDQRSTILAVDNLN ++ GRT+RVDHV +YK ++
Sbjct: 61 EVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNLNSIKVCGRTLRVDHVEQYKIPKD 120
Query: 121 EDEETRQRMR 130
D+ +R
Sbjct: 121 PDKLDEDALR 130
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN +E DLG+S ASWH +YKDSAY+Y+GG+ ++LTEGD++ +F+Q GE +DVN
Sbjct: 23 VREINKINQRELDLGLSG-ASWHDEYKDSAYIYIGGLNYELTEGDIITIFSQYGEPLDVN 81
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
LVRDK TGK +GFAF+ YEDQRST+LAVDNLNGAQ+L RT+RVDHV YK+K
Sbjct: 82 LVRDKETGKSKGFAFLMYEDQRSTVLAVDNLNGAQVLNRTLRVDHVRDYKQK 133
>gi|112983436|ref|NP_001037638.1| RNA binding motif protein X-linked 2 [Bombyx mori]
gi|109706821|gb|ABG42997.1| RNA binding motif protein X-linked 2 [Bombyx mori]
Length = 181
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK + ++ E +LG S SWH +YKDSA+++VGG+P+D TEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNVLKLS--EHELGSSSKTSWHDQYKDSAWIFVGGLPYDWTEGDVICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EIV++N+VRDK TGKP+GFAF+ YEDQRSTILAVDNLN +ILGRT+RVDH +YK
Sbjct: 59 EIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQYK 114
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 105/135 (77%), Gaps = 6/135 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L SWH +YKDSA++++GG+P+DLTEGD++ +F+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LLTDRKVSWHDQYKDSAWIFIGGLPYDLTEGDVVTIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RDK TGK +G+ F+ YEDQRSTILAVDN NG +ILGRTIRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGTKILGRTIRVDHVANYKAPKD 118
Query: 121 E---DEETRQRMREE 132
DEET+ R+R+E
Sbjct: 119 SKNIDEETK-RLRKE 132
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ I+ IN +E G + ASWH +YKDSAY+ VGG+P++LTEGD++ +F+Q GEIV
Sbjct: 1 MNQIQAIKRINEQELQSGSA--ASWHDQYKDSAYINVGGLPYNLTEGDVITIFSQYGEIV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
D+N+ RD TGKPRGFA++ Y DQRST+LAVDNLNGAQ+LGRT+RVDHV YK+ E + E
Sbjct: 59 DINMPRDPQTGKPRGFAWLMYADQRSTVLAVDNLNGAQVLGRTLRVDHVLNYKQLERDQE 118
Query: 124 ETRQRMREERGVC 136
+ + R+E+ +
Sbjct: 119 SGKMKERDEQSLA 131
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK IQ IN E LG SWH +YKDSAY+++GG+P++LTEGD++++F+Q GE V
Sbjct: 1 MNVVKEIQKINEHELQLGTR--GSWHDQYKDSAYIFIGGLPYELTEGDVISIFSQYGEPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
+VN+ RDK TGKP+GFAF+ YEDQ+ST+LAVDNLNGA I+GRTIRVDHV+KYK E
Sbjct: 59 NVNMPRDKVTGKPKGFAFLMYEDQQSTVLAVDNLNGANIVGRTIRVDHVSKYKNLE 114
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 103/136 (75%), Gaps = 7/136 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK I + +E LG SWH YKDSA++++GG+P+DLTEGD++AVF+Q G
Sbjct: 1 MNPMTNVKNIAKLGLQE--LGSDRKGSWHDDYKDSAWIFIGGLPYDLTEGDVIAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV++NLVRDK TGK +G+ F+ YEDQRSTILAVDNLNG +ILGRTIRVDHV YK
Sbjct: 59 EIVNINLVRDKDTGKQKGYGFLCYEDQRSTILAVDNLNGIKILGRTIRVDHVKDYKPPKV 118
Query: 119 --EEEDEETRQRMREE 132
+ DEET+ R+R E
Sbjct: 119 GSKNVDEETK-RLRLE 133
>gi|443697654|gb|ELT98021.1| hypothetical protein CAPTEDRAFT_86725, partial [Capitella teleta]
Length = 156
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 4/125 (3%)
Query: 7 VKRIQHINSKEADLGISDD-ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
++ + IN +E +LG++ ASWH ++K+SA+VY GG+P+DLTEGD++ VF+Q GEIV+V
Sbjct: 1 IRNLNKINERELELGLAGSGASWHKEFKESAWVYCGGLPYDLTEGDVVCVFSQYGEIVNV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE---ED 122
NL+RDKGTGK +GF F+ YEDQRSTILAVDNLNG +ILGRTIRVDHV YK +E ED
Sbjct: 61 NLIRDKGTGKSKGFCFLCYEDQRSTILAVDNLNGFKILGRTIRVDHVKDYKAPKEHGDED 120
Query: 123 EETRQ 127
E TR+
Sbjct: 121 EVTRK 125
>gi|157129340|ref|XP_001655377.1| RNA-binding protein, putative [Aedes aegypti]
gi|108882112|gb|EAT46337.1| AAEL002461-PA [Aedes aegypti]
Length = 138
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 104/133 (78%), Gaps = 4/133 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL SWH +YKDSA+++VGG+P +LTEGDLLAVF+Q G
Sbjct: 1 MNPMTNMKNVLKLS--EQDLNYGGKNSWHDQYKDSAWIFVGGLPSELTEGDLLAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV++NLVRDK TGK +GF+F+ +EDQRST+L VDN+NG ++LGRT+RVDHV+ YK K
Sbjct: 59 EIVNINLVRDKKTGKSKGFSFICFEDQRSTVLTVDNMNGIKLLGRTLRVDHVSDYKPPKD 118
Query: 119 EEEDEETRQRMRE 131
++ DEET++ E
Sbjct: 119 DKADEETKRLYME 131
>gi|328772157|gb|EGF82196.1| hypothetical protein BATDEDRAFT_34645 [Batrachochytrium
dendrobatidis JAM81]
Length = 153
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 93/110 (84%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K IQ +N+ E + G++D SWH +YKDSAY+Y+GG+P+ LTEGD++ VF+Q GE+VD++
Sbjct: 20 IKEIQKLNALELERGLTDKGSWHNQYKDSAYIYIGGLPYHLTEGDVICVFSQFGEVVDLD 79
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
+VRDK TGK +GFAF+AYEDQRST+LAVDNLNG QI GR IRVDH AKY+
Sbjct: 80 MVRDKETGKSKGFAFLAYEDQRSTVLAVDNLNGIQISGRVIRVDHTAKYR 129
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK I IN++E DLG S ASWH +YKDSAYV++GG+ D+TEGD++ +F+Q GEI+
Sbjct: 1 MNVVKEINAINARELDLG-SQSASWHDQYKDSAYVFIGGLHVDMTEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK RGF F+ YEDQRST+LAVDNLNGAQ+LGRT+RVDHV YK+ + + E
Sbjct: 60 DVNLPRDKTTGKQRGFGFLMYEDQRSTVLAVDNLNGAQVLGRTLRVDHVQNYKQPKVKGE 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%), Gaps = 4/121 (3%)
Query: 13 INSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKG 72
+N +E +LG+ SWH +YKDSA+V++GG+P+DLTEGD++AVF+Q GE+V++NLVRD
Sbjct: 1 MNERELELGLIGKKSWHDQYKDSAWVFIGGLPYDLTEGDVIAVFSQYGELVNINLVRDGK 60
Query: 73 TGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE---EDEET-RQR 128
TGK RGF F+ YEDQRST+LAVDNLNG ++LGRTIRVDHV KYK +E EDEET R R
Sbjct: 61 TGKSRGFCFLCYEDQRSTVLAVDNLNGIKLLGRTIRVDHVEKYKVPKEHGDEDEETMRVR 120
Query: 129 M 129
M
Sbjct: 121 M 121
>gi|384245417|gb|EIE18911.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 160
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 95/135 (70%), Gaps = 14/135 (10%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K Q E GISD ASWHAK+K SAY++ GG+ + LTEGDLLAVF+Q G
Sbjct: 1 MNPLTQIKNTQKATKLEIVSGISDSASWHAKFKHSAYIFAGGLAYTLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVR--------------DKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRT 106
EIVDVNLVR DK TGK RGFAF+AYEDQRST+LAVDNL+GA++ GR
Sbjct: 61 EIVDVNLVRQGSSQPISCLAIPLDKETGKSRGFAFLAYEDQRSTVLAVDNLSGAKVAGRV 120
Query: 107 IRVDHVAKYKKKEEE 121
+ V+HV YK K E
Sbjct: 121 VTVNHVDNYKVKRAE 135
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 106/135 (78%), Gaps = 5/135 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK ++ ++ +EA + + SWH+ Y+DSA+V+VGG+P++LTEGD+L VF+Q G
Sbjct: 1 MNPLTKVKLVRELSEREAGM-VPPKVSWHSMYRDSAWVFVGGLPYELTEGDILCVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
EIV+++LVRDK TGK RGF F+ YEDQRST+LAVDN NG +I GRTIRVDH + Y+
Sbjct: 60 EIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHASNYRPPRD 119
Query: 119 -EEEDEETRQRMREE 132
E+ D+ TR+ +RE+
Sbjct: 120 SEDIDDVTRE-LREK 133
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
++ I IN +E +LG+ SWH +YK+SAY+YVGG+PF+LTEGDL+ +F+Q GEI+DVN
Sbjct: 133 IREINRINERELELGVK--GSWHDEYKESAYIYVGGLPFELTEGDLITIFSQWGEIMDVN 190
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
LVRDK TGK RGF F+ YEDQRST+LAVDN+NG QI+GRT++VDH Y+++ + D
Sbjct: 191 LVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQIIGRTLKVDHTRNYRQQGKRD 246
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S +ASWH Y+D+AY+Y+GG+PF+L+EGD++ +F+Q GE
Sbjct: 1 MQSIRQIQELNKRELEAGVSPEASWHTDYRDTAYIYIGGLPFELSEGDVVTIFSQFGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NL+RDK TGK +GFAF+ YEDQRST LAVDNL G I+GRT++VDH +YKKK++E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGTVIMGRTLKVDHT-RYKKKDDEKE 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +VK IQ +N KE L +SD ASWH +YK SAYVY+GG+ LTEGD++ + +Q GEI
Sbjct: 1 MNKVKHIQSLNEKELQLNLSD-ASWHDQYKHSAYVYIGGLVTGLTEGDVITILSQFGEIA 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
D+N+ +DK TGK RGFAFV YEDQRST+LAVDNLNG+ +LGRT+RVDHV KY + + ++E
Sbjct: 60 DINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNLNGSTVLGRTLRVDHVDKYSQPKVKNE 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + ++ +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVTPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNL+RDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH +YK+KEEE E
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDH-TRYKRKEEEGE 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 106/135 (78%), Gaps = 6/135 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L + SWH +Y DSA++++GG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LVSNRSTSWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RDK TGK +G+ F+ YE+Q+ST+LAVDNLNG +ILGRTIRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRTIRVDHVANYKAPKD 118
Query: 121 E---DEETRQRMREE 132
DEET+ R+R+E
Sbjct: 119 SKNVDEETK-RLRKE 132
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 93/115 (80%), Gaps = 2/115 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I IN +E +LG+ SWH +YKDSAY+YVGG+PF+LTEGDL+ +F+Q GEI+
Sbjct: 1 MNTIREINRINERELELGVK--GSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
DVNLVRDK TGK RGF F+ YEDQRST+LAVDN+NG Q++GRT++VDH Y+++
Sbjct: 59 DVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVMGRTLKVDHTRNYRQQ 113
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 105/146 (71%), Gaps = 5/146 (3%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E LG+S SWH +YKDSAY+YVGG+ FDLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINRINEQELKLGVS--GSWHDEYKDSAYIYVGGLHFDLTEGDVITIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK +GF F+ YEDQRSTILAVDNLNGA +L +T+RVDHV YK+ +E+ +
Sbjct: 59 DVNLPRDKHTGKTKGFGFLMYEDQRSTILAVDNLNGANVLDKTLRVDHVKDYKQPKEKGD 118
Query: 124 ETRQRMREERGVCRAFQRGECTRGDG 149
+ R+E+ + + E T DG
Sbjct: 119 DGEWHERDEQSMN---AKPEITMEDG 141
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL SWH +Y+DSA+++VGG+P +LTEGDLLAVF+Q G
Sbjct: 1 MNPMTNMKNVLKLS--EQDLKFGGKNSWHDQYRDSAWIFVGGLPSELTEGDLLAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KK 118
EIV++NLVRD+ TGK +GF F+ +EDQRST+L VDNLNG ++LGRT+RVDHV+ YK K
Sbjct: 59 EIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNLNGIKLLGRTLRVDHVSDYKPPKD 118
Query: 119 EEEDEETRQRMRE 131
++ DEETR+ E
Sbjct: 119 DKADEETRRLYME 131
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 2/132 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK I IN +E DL SWH YKDSAY++ GG+ +LTEGD++ +F+Q GEI+
Sbjct: 1 MNVVKEINKINERELDLDTK--GSWHDDYKDSAYIFAGGLNTELTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVN+ RDK TGKP+GFAFV YEDQRST+LAVDNLNGA+IL RTIRVDHV YK+ E+ E
Sbjct: 59 DVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNLNGAKILERTIRVDHVKNYKQPREKGE 118
Query: 124 ETRQRMREERGV 135
+ REE+ +
Sbjct: 119 DGELHEREEQSL 130
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLGIS SWH YKDSAY++VGG+ DLTEGD++ +F+Q GEI+
Sbjct: 1 MNVVREINKINERELDLGIS--GSWHDDYKDSAYIFVGGLHRDLTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
D+NL RDK TGK +GFAF+ YEDQRSTILAVDNLNGAQ+L RT+RVDHV YK+ + + E
Sbjct: 59 DINLPRDKETGKQKGFAFLMYEDQRSTILAVDNLNGAQVLDRTLRVDHVKNYKQPKAKGE 118
Query: 124 ETRQRMREERGV 135
+ + EE+ +
Sbjct: 119 DGEWKEAEEQSL 130
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK RGFAF+ YEDQRST LAVDNL G+ +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHV-RYKRRDDEEE 119
>gi|303272303|ref|XP_003055513.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463487|gb|EEH60765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 104
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 88/101 (87%)
Query: 20 LGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGF 79
LG+S+ ASWHAKYK SAYV+ GG+ FDLTEGD+LAVF+Q GEIVDVNLVR + TGK RGF
Sbjct: 4 LGLSEGASWHAKYKHSAYVFAGGLSFDLTEGDVLAVFSQYGEIVDVNLVRHEDTGKSRGF 63
Query: 80 AFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
AF+ YEDQRST+LAVDNLNGA++LGR I+VDHV YK K+E
Sbjct: 64 AFICYEDQRSTVLAVDNLNGAKVLGRIIKVDHVEDYKLKDE 104
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG S ASWH +YKDSAY+++GG+ FDLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINKINERELELG-SSTASWHDEYKDSAYIFIGGLHFDLTEGDVITIFSQYGEVM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK +GF F+ YEDQRSTILAVDNLNGA++L RT+RVDHV YK+ + + E
Sbjct: 60 DVNLPRDKETGKTKGFGFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVRNYKQPKVKGE 119
Query: 124 ETRQRMREERGV 135
+ + REE+ +
Sbjct: 120 DGEWQEREEQSL 131
>gi|389744512|gb|EIM85695.1| hypothetical protein STEHIDRAFT_169554 [Stereum hirsutum FP-91666
SS1]
Length = 349
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 107/153 (69%), Gaps = 4/153 (2%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLG+S ASWH +YKDSAY+++GG+ ++LTEGD++A+F+Q GE++
Sbjct: 1 MNVVQEINKINERELDLGLSG-ASWHDEYKDSAYIFIGGLNYELTEGDVIAIFSQYGEVM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL R K TGK +GF F+ YEDQRSTILAVDNLNGAQ+L RT+RVDHV YK+ + + E
Sbjct: 60 DVNLPRSKETGKTKGFGFLMYEDQRSTILAVDNLNGAQVLERTLRVDHVKNYKQPKNKGE 119
Query: 124 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 156
+ EE+ + R E DG + E
Sbjct: 120 DGEWVESEEQSLN---ARPEIIVDDGASDTSEE 149
>gi|341892274|gb|EGT48209.1| hypothetical protein CAEBREN_24057 [Caenorhabditis brenneri]
Length = 302
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-- 116
GE+++VNL+RDK TGK +GFAF+ Y+DQRST+LAVDN NG + R IRVDHV KYK
Sbjct: 61 YGEVMNVNLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEKYKVP 120
Query: 117 -KKEEEDEETRQRMREERGVCRAFQR 141
KE+ DEETR R+ EE +A R
Sbjct: 121 NYKEDADEETR-RLWEEGCAPKAIMR 145
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA I+GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLCGANIMGRLLRVDHM-RYKRKEEE 117
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 104/135 (77%), Gaps = 5/135 (3%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V I+ ++ +E G SWH +Y DSA+V+VGG+P++LTEGD+L VF+Q GEIV
Sbjct: 5 MYNVNAIKKLSDQELSSGSG--KSWHDQYSDSAWVFVGGLPYELTEGDVLCVFSQYGEIV 62
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KKEEE 121
++N+VRDK TGKP+GFAF+ YE+Q+ST+LAVDN NG +I GRTIRVDHV+ Y+ K+ EE
Sbjct: 63 NINMVRDKKTGKPKGFAFICYENQKSTVLAVDNFNGVKIKGRTIRVDHVSNYRVPKEHEE 122
Query: 122 DEETRQRMREERGVC 136
D++ +++R+E GV
Sbjct: 123 DDDITKKIRQE-GVA 136
>gi|336373895|gb|EGO02233.1| hypothetical protein SERLA73DRAFT_178081 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386805|gb|EGO27951.1| hypothetical protein SERLADRAFT_462274 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 101/132 (76%), Gaps = 2/132 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG+S SWH +YKDSAY+++GG+ F+LTEGD++A+F+Q GE++
Sbjct: 1 MNVVREISKINERELELGVS--GSWHDEYKDSAYIFIGGLNFELTEGDVIAIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK RGF F+ YEDQRST+LAVDNLNGA++L +T+RVDHV YK+ + E
Sbjct: 59 DVNLPRDKNTGKTRGFGFLMYEDQRSTVLAVDNLNGAKVLEKTLRVDHVKNYKQPGAKGE 118
Query: 124 ETRQRMREERGV 135
+ R EE+ +
Sbjct: 119 DGEWREPEEQSL 130
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 100/121 (82%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++A+F+Q GE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH A+YK+K++E+E
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDH-ARYKRKDDEEE 119
Query: 124 E 124
+
Sbjct: 120 Q 120
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA +LGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 117
>gi|119183786|ref|XP_001242884.1| hypothetical protein CIMG_06780 [Coccidioides immitis RS]
gi|392865790|gb|EAS31617.2| U2 snRNP component IST3 [Coccidioides immitis RS]
Length = 269
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM-RYKRKEEE 117
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK I IN +E +LG+S ASWH +YKDSAY++VGG+ +LTEGD++ +F+Q GEI+
Sbjct: 1 MNVVKEINRINERELELGLSG-ASWHDEYKDSAYIFVGGLNRELTEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
D+N+ R+K TGKP+GFAFV YEDQRST+LAVDNLNG+++ RT+RVDHV YK+K ++E
Sbjct: 60 DINMPREKETGKPKGFAFVMYEDQRSTVLAVDNLNGSKVAERTLRVDHVKNYKQKRTKNE 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|303320035|ref|XP_003070017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109703|gb|EER27872.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320034356|gb|EFW16301.1| U2 snRNP component IST3 [Coccidioides posadasii str. Silveira]
Length = 271
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM-RYKRKEEE 117
>gi|226286984|gb|EEH42497.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 280
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEE 117
>gi|225683370|gb|EEH21654.1| U2 snRNP component IST3 [Paracoccidioides brasiliensis Pb03]
Length = 280
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEE 117
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + + +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQSLNKRELENAVPPEASWHADYRDTAYIYIGGLPYDLSEGDVVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRMLRVDHV-RYKRRDDEEE 119
>gi|340727255|ref|XP_003401963.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
terrestris]
Length = 139
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 105/135 (77%), Gaps = 6/135 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L + SWH +Y DSA++++GG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LVSNRSISWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RDK TGK +G+ F+ YE+Q+ST+LAVDNLNG +ILGR IRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRIIRVDHVANYKAPKD 118
Query: 121 E---DEETRQRMREE 132
DEET+ R+R+E
Sbjct: 119 SKNVDEETK-RLRKE 132
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH A+YK+K++E+E
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDH-ARYKRKDDEEE 119
Query: 124 E 124
+
Sbjct: 120 Q 120
>gi|324512768|gb|ADY45275.1| RNA-binding motif protein, X-linked 2 [Ascaris suum]
Length = 318
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 107/153 (69%), Gaps = 6/153 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T ++ I ++E +LG+ + SWH KY +SA++Y+GG+P+DL EGD++ VF+Q
Sbjct: 1 MNPITNIRNQNKITTRELELGVIGGSGKSWHDKYANSAWIYIGGLPYDLNEGDIITVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY--- 115
GEIV++NL+RD TGK RGFAF+ Y+DQRST+LAVDN NG ++L R IRVDHV +Y
Sbjct: 61 YGEIVNINLIRDHKTGKSRGFAFLCYQDQRSTVLAVDNFNGIKLLKRMIRVDHVEEYKVP 120
Query: 116 KKKEEEDEETRQRMREERGVCRAFQRGECTRGD 148
K +E+ DEE R R+ EE + + GD
Sbjct: 121 KYREDVDEEIR-RLWEEGCAPKPINITQANDGD 152
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 93/117 (79%), Gaps = 2/117 (1%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K + IN +E LG+S SWH +YKDSAYVY+G +P DLTEGD++ + +Q GE++DVNL
Sbjct: 3 KEVARINERELQLGVS--GSWHDQYKDSAYVYIGNLPRDLTEGDVITIMSQYGEVMDVNL 60
Query: 68 VRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
RDK TGK RGF F+ YEDQRST+LAVDNLNGA++L RTIRVDHV+ YK+ +E+D +
Sbjct: 61 PRDKQTGKIRGFGFLMYEDQRSTVLAVDNLNGAKVLDRTIRVDHVSDYKQPKEKDAD 117
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 100/124 (80%), Gaps = 3/124 (2%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN+ A +G S+ SWHA+YKDSAY+Y+GG+P+DLTEGD++ +F+Q GE +D+N
Sbjct: 2 VREIARINA--AQIGASESESWHAQYKDSAYIYIGGLPYDLTEGDIICIFSQYGEPLDIN 59
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KKEEEDEET 125
L+RDK TGK +GF F+ YEDQRSTILAVDNL+GA++LGRT++VDHV Y+ K++ D+E
Sbjct: 60 LIRDKKTGKSKGFCFLKYEDQRSTILAVDNLSGAKVLGRTLKVDHVLNYRHPKQDSDDEQ 119
Query: 126 RQRM 129
+M
Sbjct: 120 SGKM 123
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK RGFAF+ YEDQRST LAVDNL G+ +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHV-RYKRRDDEEE 119
>gi|261202032|ref|XP_002628230.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590327|gb|EEQ72908.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 258
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA +LGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 117
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD++ +F+Q GE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNL+RDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDH A+YKK+++E+E
Sbjct: 61 HVNLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRILRVDH-ARYKKRDDEEE 119
>gi|348670163|gb|EGZ09985.1| hypothetical protein PHYSODRAFT_262195 [Phytophthora sojae]
Length = 228
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 100/135 (74%), Gaps = 8/135 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V IQ +N +E +L + ASWH KY++SA+VYVGG+PF+L+EGD+L V +Q GE+
Sbjct: 1 MNVVAEIQRLNERELELNVPLSASWHQKYRESAWVYVGGLPFELSEGDVLCVLSQFGEVE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE---- 119
D++LVRD TGKP+GFAF+ +EDQRST+LAVDNLNG ++L R +RVDHV KYK +
Sbjct: 61 DIHLVRDGKTGKPKGFAFLKFEDQRSTVLAVDNLNGFRLLDRVLRVDHVLKYKLPKELQE 120
Query: 120 ----EEDEETRQRMR 130
E+DE+T +R R
Sbjct: 121 DSDSEDDEQTERRPR 135
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQVQALNKRELEHAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDH +YKK+ +EDE
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHT-RYKKR-DEDE 118
Query: 124 ET 125
+T
Sbjct: 119 DT 120
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + IS +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAISPEASWHADYRDTAYIYIGGLPYDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGF F+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 92/115 (80%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K ++ I +E +LGI ASWH +Y SAY+++GG+ +DLTEGD+L+VF+Q GEIV++N
Sbjct: 1 MKSVRDITLRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNIN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
LVRDK TGK +GF F+ YEDQRSTILAVDN NG ++ GR+IRVDHV Y++ ++E
Sbjct: 61 LVRDKKTGKSKGFCFIGYEDQRSTILAVDNFNGIKLCGRSIRVDHVQNYRRPKDE 115
>gi|339247525|ref|XP_003375396.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
gi|316971276|gb|EFV55078.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
Length = 287
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 5/132 (3%)
Query: 5 TQVKRIQHINSKEADLGIS--DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
VK + IN +E LG++ D SWH KYKDSA++++GG+PF L+EGD++ VF+Q GE+
Sbjct: 22 INVKNLNKINERELHLGLAGKSDRSWHQKYKDSAWIFIGGLPFQLSEGDIICVFSQYGEV 81
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE-- 120
V +NL+RDK TGK RGF F+ YEDQRST+LAVDN NG ++LGR IRVDHV Y+ +E
Sbjct: 82 VQLNLIRDKKTGKSRGFCFLCYEDQRSTVLAVDNFNGIKLLGRIIRVDHVENYRVPKERG 141
Query: 121 -EDEETRQRMRE 131
EDE T++ E
Sbjct: 142 DEDEITKKLWLE 153
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|328698189|ref|XP_001949636.2| PREDICTED: hypothetical protein LOC100169481 [Acyrthosiphon pisum]
Length = 297
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 92/116 (79%), Gaps = 2/116 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ ++ ++ E +L +SWH +YK SA+++VGG+P+DL+EGD++++F+Q G
Sbjct: 1 MNPLTNMRNVKKLS--EQELQRLPKSSWHDEYKSSAWIFVGGLPYDLSEGDIMSIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EI ++NLVRDK TGK +GF FV YEDQRSTILAVDN NG ++LGR +RVDHV YK
Sbjct: 59 EITNLNLVRDKDTGKQKGFCFVCYEDQRSTILAVDNFNGTRVLGRILRVDHVKDYK 114
>gi|358335067|dbj|GAA28104.2| RNA-binding motif protein X-linked 2 [Clonorchis sinensis]
Length = 314
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDAS-WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N +E LG + AS WH +YKDSA++++GG+ F+LTEGD++ VF+Q
Sbjct: 1 MNPITNTKNQNLMNMRELGLGYTGTASSWHRQYKDSAWIFIGGLNFELTEGDIICVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GE+V++NLVRDK TG +GFAF+ YEDQRST+LA DNLNG ++ GR IRVDHV KYK
Sbjct: 61 GEVVNINLVRDKKTGISKGFAFLCYEDQRSTVLATDNLNGIKLAGRIIRVDHVEKYK 117
>gi|195433960|ref|XP_002064974.1| GK14925 [Drosophila willistoni]
gi|194161059|gb|EDW75960.1| GK14925 [Drosophila willistoni]
Length = 158
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G + SWH Y+DSA+++VGG P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG-AGKKSWHDMYRDSAWIFVGGFPYTLTEGDLVCVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG QI GRT+RVDHV+ Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIQITGRTLRVDHVSDYKPPKE 119
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 120 NEKTDEETLRLYME 133
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 101/134 (75%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K ++ ++ +E G + SWH +Y+DSA+V++GG+PFDLTEGD++ +F+Q G
Sbjct: 1 MNPLTNMKNVKKLSEQELYTG--NKTSWHDQYRDSAWVFIGGLPFDLTEGDIICIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RDK +GK +GF F+ YEDQRST LAVDN NG +IL RTIRVDHV+ YK ++
Sbjct: 59 EVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNFNGIKILNRTIRVDHVSNYKVPKQ 118
Query: 121 ---EDEETRQRMRE 131
D ET++ E
Sbjct: 119 GKKTDAETKKLYDE 132
>gi|225711148|gb|ACO11420.1| RNA-binding motif protein, X-linked 2 [Caligus rogercresseyi]
Length = 434
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +Q +N +E +LG++ +SWH YKDSA++++GG+ ++L+EGD++++F+Q
Sbjct: 1 MNPITNAKNLQKMNQRELELGLAGTKSSWHYDYKDSAWIFIGGLNYELSEGDIISIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GE+V +NLVRD +GK +GFAF+ YEDQ STILAVDNLN +L RTIRVDHV YK
Sbjct: 61 GEVVHINLVRDGKSGKSKGFAFLCYEDQLSTILAVDNLNAITLLQRTIRVDHVQTYK 117
>gi|298708119|emb|CBJ30461.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 402
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 108/174 (62%), Gaps = 10/174 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN + ++KRI N +E + G+S ASWH +YKDSA+V+ GG P+DLTEGD+L V +Q G
Sbjct: 1 MNVIQEIKRI---NERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWG 57
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY----- 115
EI D+NL R+K TGK +GF F+ YE+Q+STILAVDN NG +LGRTIRVDH KY
Sbjct: 58 EIEDINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAE 117
Query: 116 --KKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQ 167
+K E+EDEE R ++ G G SHN + + P+
Sbjct: 118 VREKAEKEDEERVARGEAPSEKGPQWRPGVAYEGKQLATSHNFHKGVDVFAKPE 171
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
V+L+RDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDH A+YKK+ E+E
Sbjct: 61 HVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLTGATVLGRVLRVDH-ARYKKRGNEEE 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|357611289|gb|EHJ67406.1| RNA binding motif protein X-linked 2 [Danaus plexippus]
Length = 185
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK + ++ +E L + +SWH +YKDSA+++VGG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNVLKLSERE--LTGNSKSSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EIV++NLVRDK TG+ +GFAF+ YEDQRSTILAVDNLN +ILGRTIRVDH +Y+
Sbjct: 59 EIVNINLVRDKDTGRSKGFAFICYEDQRSTILAVDNLNSIKILGRTIRVDHCEQYR 114
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDH A+YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDH A+YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|443900181|dbj|GAC77508.1| predicted RNA-binding protein [Pseudozyma antarctica T-34]
Length = 318
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 26/145 (17%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN+ E D+ I + ASWH +Y+DSAY+++GG+P+DLTEGD++A+F+Q GE+
Sbjct: 1 MNVVREISRINAAELDIAIKNPSASWHEQYRDSAYIFIGGLPYDLTEGDVIAIFSQYGEV 60
Query: 63 VDVNLVRD-------------------------KGTGKPRGFAFVAYEDQRSTILAVDNL 97
VDVNL R +G GK RGF F+ YEDQRST+LAVDNL
Sbjct: 61 VDVNLPRPAQQPSNSEDKQSGSASTSRDAAQPRQGKGKHRGFGFLMYEDQRSTVLAVDNL 120
Query: 98 NGAQILGRTIRVDHVAKYKKKEEED 122
NGAQ+LGRT+RVDHVA YK+ + D
Sbjct: 121 NGAQVLGRTLRVDHVASYKQPKMRD 145
>gi|256087425|ref|XP_002579870.1| rna recognition motif containing protein [Schistosoma mansoni]
Length = 279
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLG-ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N KE LG +SWH +YKDSA++YVGG+ +DLTEGD++ VF+Q
Sbjct: 22 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 81
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GEIV++NLVRDK TG +GFAFV YEDQRST+LA DNLNG ++ GR IRVDHV KY+
Sbjct: 82 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYR 138
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLG-ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N KE LG +SWH +YKDSA++YVGG+ +DLTEGD++ VF+Q
Sbjct: 1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GEIV++NLVRDK TG +GFAFV YEDQRST+LA DNLNG ++ GR IRVDHV KY+
Sbjct: 61 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYR 117
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M + ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q G
Sbjct: 1 MAGMNAIRQLQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E V +NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDH A+YK+KEE
Sbjct: 61 EPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEE 119
Query: 121 E 121
E
Sbjct: 120 E 120
>gi|242025632|ref|XP_002433228.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
gi|212518769|gb|EEB20490.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
Length = 121
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 92/116 (79%), Gaps = 2/116 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK I+ ++ E +L SWH +YKDSA+V+VGG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNIKKLS--EEELKGRYKTSWHEQYKDSAWVFVGGLPYDLTEGDIICVFSQFG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E V++NLVRDK +GK RGF F+ YEDQRST LAVDNLNG +ILGRTIRVDHV YK
Sbjct: 59 EPVNINLVRDKDSGKSRGFCFLCYEDQRSTNLAVDNLNGVKILGRTIRVDHVENYK 114
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NL+RDK TGK +GFAF+ YEDQRST LAVDNL GA I GRT++VDH +YK+KE E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT-RYKRKEGE-E 118
Query: 124 ETRQRMREE 132
+T + EE
Sbjct: 119 DTGMDLNEE 127
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + +S +ASWHA Y+D+AYVY+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVSPEASWHADYRDTAYVYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDE 117
>gi|403415035|emb|CCM01735.1| predicted protein [Fibroporia radiculosa]
Length = 352
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 97/130 (74%), Gaps = 2/130 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLG + SWH YKDSAY+++GG+ DLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINKINERELDLGGT--GSWHDDYKDSAYIFIGGLHSDLTEGDVITIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVN+ RDK TGK RGFAF+ YEDQRSTILAVDNLN A +L RT+RVDHV YK+ + + E
Sbjct: 59 DVNMPRDKATGKTRGFAFLMYEDQRSTILAVDNLNSANVLERTLRVDHVKDYKQPKVKGE 118
Query: 124 ETRQRMREER 133
+ + REE+
Sbjct: 119 DGEWQEREEQ 128
>gi|308503018|ref|XP_003113693.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
gi|308263652|gb|EFP07605.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
Length = 302
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E +LG + D SWH YKDSA++Y+GG+ + LTEGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALTEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY--- 115
GE++++NL+RDK TGK +GFAF+ Y+DQRST+LAVDN NG + R IRVDHV +Y
Sbjct: 61 YGEVMNINLIRDKETGKSKGFAFLCYKDQRSTVLAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 116 KKKEEEDEETRQRMREERGVCRAFQR 141
K KE+ D+ET+ R+ EE + R
Sbjct: 121 KYKEDADDETK-RLWEEGCAPKPIMR 145
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
Query: 5 TQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVD 64
+ +K I+ IN +E +LG+ SWH +YKDSAYV++GG+ +++TEGD++ VF+Q GE+VD
Sbjct: 1 STIKEIERINLRELELGVK--GSWHDEYKDSAYVFIGGLSYEMTEGDVIIVFSQWGEVVD 58
Query: 65 VNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+NL RDK TGK RGF F+ YEDQRST+LAVDN+NGAQILGRTIRVDH YK+
Sbjct: 59 INLPRDKETGKTRGFGFLMYEDQRSTVLAVDNMNGAQILGRTIRVDHCKSYKQ 111
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I+ +N +E + GI ASWH + D+AYVY+GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNNIRAIEKLNQRELEAGIPLSASWHTDWSDTAYVYIGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNL+RDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDH +YK KE E E
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTNLAVDNLGGATILGRIIRVDHT-RYKPKEGELE 119
Query: 124 ET 125
E
Sbjct: 120 EL 121
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + +S +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVSPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 124 ETRQRMREERGVCRA 138
E +E G A
Sbjct: 120 EDNLANVDENGEAVA 134
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DL SWH +YKDSAY+++GG+ ++LTEGD++ VF+Q GE+V
Sbjct: 1 MNVVREINRINERELDLA-PGQGSWHDQYKDSAYIFIGGLNYELTEGDVITVFSQYGEVV 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+++ R+K TGK RGFAF+ YEDQRST+LAVDNLNGA++ GRT+RVDHV YK+KE D
Sbjct: 60 DIDMPREKSTGKRRGFAFLMYEDQRSTVLAVDNLNGAELAGRTLRVDHVQNYKQKELVD 118
>gi|343426144|emb|CBQ69675.1| related to rna binding motif protein [Sporisorium reilianum SRZ2]
Length = 368
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 24/145 (16%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ I++ ASWH +Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREISRINQTELDIAINNPSASWHQQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEV 60
Query: 63 VDVNLVR------DKGTG-----------KP------RGFAFVAYEDQRSTILAVDNLNG 99
VDVNL R DKG G KP RGF F+ YEDQRST+LAVDNLNG
Sbjct: 61 VDVNLPRANPNANDKGDGAASSSSQQQQPKPVGKGKHRGFGFLMYEDQRSTVLAVDNLNG 120
Query: 100 AQILGRTIRVDHVAKYKKKEEEDEE 124
AQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 121 AQVLGRTLRVDHVASYKQPKVTDED 145
>gi|195580271|ref|XP_002079976.1| GD24233 [Drosophila simulans]
gi|194191985|gb|EDX05561.1| GD24233 [Drosophila simulans]
Length = 155
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RD TGK +GF F+ YEDQRST+LAVDNLNG +IL RT+RVDHVA YK +E
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 121 E---DEETRQRMRE 131
DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 100/131 (76%), Gaps = 11/131 (8%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG++ ASWH +YKDSA ++VGG+ DLTEGD++ +F+Q GEI+
Sbjct: 1 MNVVREINAINQRELELGLT--ASWHDEYKDSARIFVGGLHNDLTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE---- 119
D+N+ RDK TGKPRGFAF+ YEDQRSTILAVDNLNGA++L RT+RVDHV +YK+ +
Sbjct: 59 DINMPRDKETGKPRGFAFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVKQYKQPKVKNA 118
Query: 120 -----EEDEET 125
E+DEE
Sbjct: 119 DGEWVEQDEEV 129
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + VK I IN E DLG+S ASWH +YKDSAYV+VGG+ FDLTEGD++ +F+Q GE+
Sbjct: 1 PRSVVKEINKINQAELDLGLSG-ASWHDEYKDSAYVFVGGLHFDLTEGDVITIFSQYGEV 59
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+D+++ RDK TGK +GF F+ YEDQRST+LAVDNLNGA++L RT+RVDHV YK+
Sbjct: 60 MDLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQ 114
>gi|195345201|ref|XP_002039161.1| GM17378 [Drosophila sechellia]
gi|194134291|gb|EDW55807.1| GM17378 [Drosophila sechellia]
Length = 154
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NL+RD TGK +GF F+ YEDQRST+LAVDNLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|20129641|ref|NP_610003.1| CG10466, isoform A [Drosophila melanogaster]
gi|442628478|ref|NP_001260601.1| CG10466, isoform B [Drosophila melanogaster]
gi|7298629|gb|AAF53845.1| CG10466, isoform A [Drosophila melanogaster]
gi|440213961|gb|AGB93136.1| CG10466, isoform B [Drosophila melanogaster]
Length = 154
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NL+RD TGK +GF F+ YEDQRST+LAVDNLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|111226498|ref|XP_001134546.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970613|gb|EAS66863.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 348
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 94/120 (78%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ +Q+IN KE +L IS+ ASWHA Y S Y+YVGG+ +DL EGD++A+F+Q GEI
Sbjct: 1 MHRIREVQNINKKELNLNISESASWHADYSHSPYIYVGGLNYDLNEGDVIAIFSQYGEIS 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ NLVR+K TG+ +GF FV Y+ Q+ST+LAVDNLNG +LG+TI+VDHV YK+ ++ +E
Sbjct: 61 ECNLVRNKETGRSQGFCFVGYDQQKSTVLAVDNLNGINLLGKTIKVDHVKDYKRPKKNNE 120
>gi|195484576|ref|XP_002090750.1| GE13281 [Drosophila yakuba]
gi|194176851|gb|EDW90462.1| GE13281 [Drosophila yakuba]
Length = 154
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQNG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NL+RD TGK +GF F+ YEDQRST+LAVDNLNG +IL RT+RVDHVA YK +E
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 121 E---DEETRQRMRE 131
DEET + E
Sbjct: 119 NERMDEETLRLYME 132
>gi|225718494|gb|ACO15093.1| RNA-binding motif protein, X-linked 2 [Caligus clemensi]
Length = 359
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K + +N +E +LGI+ SWH YKDSA++++GG+ ++L+EGD++++F+Q
Sbjct: 1 MNPITNAKNLAKMNQRELELGIAGTKGSWHYDYKDSAWIFMGGLNYELSEGDIISIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK- 118
GE+V +NLVRD TGK +GFAF+ YEDQRSTILAVD+LN +L RTIRVDHV YK
Sbjct: 61 GEVVHINLVRDGKTGKSKGFAFLCYEDQRSTILAVDDLNAITLLKRTIRVDHVQTYKLPK 120
Query: 119 --EEEDEETRQRMRE 131
E DE+ R+ E
Sbjct: 121 DLERLDEDKRKLFME 135
>gi|268531492|ref|XP_002630872.1| Hypothetical protein CBG02589 [Caenorhabditis briggsae]
Length = 302
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E +LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY--- 115
GE++++NL+RDK TGK +GFAF+ Y+DQRST+LAVDN NG + R IRVDHV +Y
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEEYKVP 120
Query: 116 KKKEEEDEETRQRMREERGVCRAFQR 141
K KE+ D+ET+ R+ EE + R
Sbjct: 121 KYKEDADDETK-RLWEEGCAPKPIMR 145
>gi|17532167|ref|NP_495237.1| Protein C30B5.4 [Caenorhabditis elegans]
gi|351058643|emb|CCD66136.1| Protein C30B5.4 [Caenorhabditis elegans]
Length = 302
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 6/146 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY--- 115
GE++++NL+RDK TGK +GFAF+ Y+DQRSTILAVDN NG + R IRVDHV +Y
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 116 KKKEEEDEETRQRMREERGVCRAFQR 141
K KE+ D+ET+ R+ EE + R
Sbjct: 121 KYKEDADDETK-RLWEEGCAPKPVMR 145
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
VK I+ +N +E L + +SWH +YKDSA+++VGG+P++LTEGD++A+F+Q GE+V++N
Sbjct: 40 VKNIKKLNEQE--LQGKNKSSWHDQYKDSAWIFVGGLPYNLTEGDVIAIFSQYGEVVNIN 97
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE---DE 123
L+RDK TGK +G+ F+ YEDQRSTILAVDN NG +ILGR IRVDHV+ YK ++ DE
Sbjct: 98 LIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVSNYKAPKDSKNIDE 157
Query: 124 ETRQRMRE 131
ETR +E
Sbjct: 158 ETRNLRKE 165
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDE 117
>gi|164657279|ref|XP_001729766.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
gi|159103659|gb|EDP42552.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
Length = 357
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 96/141 (68%), Gaps = 20/141 (14%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ IN +E +LG+ SWH +YKDSAY+YVGG+P+DLTEGD+L +F+Q GEIV
Sbjct: 1 MNSVREIQRINERELELGLHGSGSWHDQYKDSAYIYVGGLPYDLTEGDVLTIFSQYGEIV 60
Query: 64 DVNLVRD--------------------KGTGKPRGFAFVAYEDQRSTILAVDNLNGAQIL 103
+++L + K G+ RGF F+ YEDQRST+LAVDNLNG+Q+L
Sbjct: 61 NIHLPKPREEPGPSDKDRRAHDPQESKKSHGRNRGFGFLMYEDQRSTVLAVDNLNGSQVL 120
Query: 104 GRTIRVDHVAKYKKKEEEDEE 124
GRT+RVDHVA +K++ D E
Sbjct: 121 GRTLRVDHVANFKQERVRDAE 141
>gi|194879282|ref|XP_001974209.1| GG21207 [Drosophila erecta]
gi|190657396|gb|EDV54609.1| GG21207 [Drosophila erecta]
Length = 154
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDIVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NL+RD TGK +GF F+ YEDQRST+LAVDNLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 100/131 (76%), Gaps = 5/131 (3%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
L +K +Q ++ ++ LG + SWH +Y+DSA+++VGG+P+DLTEGD++ VF+Q GEIV
Sbjct: 64 LRNMKNVQKLSDQDLKLGGKN--SWHDQYRDSAWIFVGGLPYDLTEGDVICVFSQYGEIV 121
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KKKEE 120
++NLVRDK +GK +GF F+ YEDQRST+LAVDNLNG +++G+T+RVDHV Y K+ E
Sbjct: 122 NINLVRDKTSGKSKGFCFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKENEN 181
Query: 121 EDEETRQRMRE 131
D ET+Q E
Sbjct: 182 TDAETKQLYME 192
>gi|330800733|ref|XP_003288388.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
gi|325081570|gb|EGC35081.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
Length = 121
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 94/118 (79%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ IQ IN KE L I+D+ASWHA Y S Y+YVGG+ FDLTEGD++++F+Q GEI + N
Sbjct: 4 VREIQGINQKELSLNINDNASWHADYSHSPYIYVGGLNFDLTEGDIISIFSQYGEISECN 63
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
LVR+K TGK +GF F+ Y++Q+ST+LAVDN NG ++LG+TI+VDHV YK+ ++ +E+
Sbjct: 64 LVRNKETGKSQGFCFIGYDNQKSTVLAVDNFNGIKVLGKTIKVDHVKDYKRPKKNNED 121
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 124 ETRQRMREERG 134
E +E G
Sbjct: 120 EDNLVNVDENG 130
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 124 ETRQRMREERG 134
E +E G
Sbjct: 120 EDNLVNVDENG 130
>gi|156058602|ref|XP_001595224.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980]
gi|154701100|gb|EDO00839.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+ ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVPPSASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA I GRT++VDH +YK+KE E++
Sbjct: 61 YINLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT-RYKRKEGEED 119
>gi|325188529|emb|CCA23063.1| carbohydratebinding protein putative [Albugo laibachii Nc14]
Length = 899
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN + ++KRI N +E +LG+ SWH KYKDSA+VY+GG+ F+LTEGD++ V +Q G
Sbjct: 614 MNVIAEIKRI---NERELELGVPFKGSWHQKYKDSAWVYIGGLSFELTEGDVICVMSQFG 670
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EI D+NL+RD TGK +GFAF+ YE+Q+ST+LAVDNLNG ++L R +RVDHV KY+ +E
Sbjct: 671 EIEDINLIRDPKTGKSKGFAFLKYENQKSTVLAVDNLNGYRLLDRLLRVDHVLKYRLPKE 730
Query: 121 EDEETRQRMREERG 134
+ ++ + E+ G
Sbjct: 731 --SQMKEELLEQGG 742
>gi|71021267|ref|XP_760864.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
gi|46100960|gb|EAK86193.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
Length = 385
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 95/151 (62%), Gaps = 30/151 (19%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ I S ASWH +Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREISRINQAELDIAIRSPSASWHQQYNDSAYIFIGGLPYDLTEGDVVTIFSQYGEV 60
Query: 63 VDVNLVRDKGT-----------------------------GKPRGFAFVAYEDQRSTILA 93
VDVNL R T GK RGF F+ Y+DQRST+LA
Sbjct: 61 VDVNLPRANPTSTCTHANNNDNDDRNRAASSSQQSKPLAKGKHRGFGFLMYQDQRSTVLA 120
Query: 94 VDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
VDNLNGAQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 121 VDNLNGAQVLGRTLRVDHVASYKQPKVTDEQ 151
>gi|194760456|ref|XP_001962456.1| GF14433 [Drosophila ananassae]
gi|190616153|gb|EDV31677.1| GF14433 [Drosophila ananassae]
Length = 155
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH Y+DSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYRDSAWIFVAGFPYTLTEGDLICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHVA YK +E
Sbjct: 59 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKE 118
Query: 121 E---DEETRQRMRE 131
DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGFAF+ YEDQRST LAVDNL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 124 ETRQRMREERG 134
E +E G
Sbjct: 120 EDNLVNVDENG 130
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN E D + ASWH YKDSAYV+VGG+ +DL+EGD++ +F+Q GEI+
Sbjct: 1 MNVVREINRINQVELD-SATGTASWHDDYKDSAYVFVGGLSYDLSEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK +GF FV YEDQRST+LAVDNLNGA++L RT+RVDHV YK+ + ++E
Sbjct: 60 DVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNE 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|440634763|gb|ELR04682.1| hypothetical protein GMDG_01540 [Geomyces destructans 20631-21]
Length = 256
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + G+S +ASWH+ YKD+AY+Y+GG+PF L+EGD++ +F+Q GE
Sbjct: 1 MNSIRQVQELNRRELENGVSPEASWHSDYKDTAYIYIGGLPFQLSEGDIITIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+NLVRDK TG+ +GFAF+ YEDQRST LAVDNL G +I+ R +RVDH +YKK++EE
Sbjct: 61 FINLVRDKETGESKGFAFLKYEDQRSTDLAVDNLGGTKIMNRVLRVDH-TRYKKQDEE 117
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 94/135 (69%), Gaps = 7/135 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDD--ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+ K I N KE DLG +SWH KY S+Y++VG +PF+LTEGDLL VF Q G
Sbjct: 1 MQTTKSILQANEKELDLGHIGGYGSSWHDKYSHSSYIFVGNLPFELTEGDLLVVFEQYGH 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK--- 118
I DV+LVRD+ TGK +GFAF+ YEDQRSTILAVDN NG +LGRT+RVDHVA YKKK
Sbjct: 61 IADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVDNFNGTVLLGRTLRVDHVAHYKKKVDD 120
Query: 119 --EEEDEETRQRMRE 131
+E+EE + RE
Sbjct: 121 SVVQEEEELFDQNRE 135
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|340387228|ref|XP_003392109.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Amphimedon queenslandica]
Length = 123
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 92/115 (80%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K ++ I +E +LGI ASWH +Y SAY+++GG+ +DLTEGD+L+VF+Q GEIV++N
Sbjct: 1 MKSVRDITLRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNIN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
LVRDK TGK +GF F+ YEDQRSTILAVDN NG ++ GR+IRVDHV Y++ ++E
Sbjct: 61 LVRDKKTGKSKGFCFIGYEDQRSTILAVDNFNGIKVCGRSIRVDHVQNYRRPKDE 115
>gi|323456906|gb|EGB12772.1| hypothetical protein AURANDRAFT_19053, partial [Aureococcus
anophagefferens]
Length = 120
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 88/114 (77%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+ ++Q +N +E +LGIS +ASWHAKYKDSA+VYVGG+ DL+EGD++ V +Q GEI D N
Sbjct: 1 MAQVQKLNERELELGISAEASWHAKYKDSAWVYVGGLSTDLSEGDIICVLSQWGEIEDFN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
RDK TGKPRG+ + YEDQRSTILAVDN NGA +L RT+RVDH KYK E
Sbjct: 61 YPRDKKTGKPRGWCWAKYEDQRSTILAVDNGNGASLLSRTLRVDHCEKYKLPPE 114
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NL+RDK TGK +GFAF+ YEDQRST LAVDNL GA I GRT++VDH +YK+KE E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDH-TRYKRKEGE-E 118
Query: 124 ETRQRMREE 132
+T + EE
Sbjct: 119 DTGMDLNEE 127
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN E D + ASWH YKDSAY++VGG+ +DL+EGD++ +F+Q GEI+
Sbjct: 1 MNVVREINRINQVELD-SATGTASWHDDYKDSAYIFVGGLSYDLSEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DVNL RDK TGK +GF FV YEDQRST+LAVDNLNGA++L RT+RVDHV YK+ + ++E
Sbjct: 60 DVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNE 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ +N +E + GI+ +ASWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSVRNIQQLNKRELEAGINPEASWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK RGFA++ YEDQRS LAVDNL GA I+ R IRVDH A+YK +++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGATIMDRVIRVDH-ARYKPRDDED 118
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|301113430|ref|XP_002998485.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
gi|262111786|gb|EEY69838.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
Length = 233
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 88/117 (75%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V IQ +N +E +L + SWH KY +SA+V+VGG+PF+L+EGD+L V +Q GEI
Sbjct: 1 MNVVAEIQRLNERELELNVPLSGSWHQKYSESAWVFVGGLPFELSEGDVLCVLSQFGEIE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
D++LVRD TGK +GF F+ +EDQRSTILAVDNLNG ++L R +RVDHV KYK +E
Sbjct: 61 DIHLVRDGKTGKSKGFVFIKFEDQRSTILAVDNLNGFKLLERVLRVDHVLKYKLPKE 117
>gi|255080758|ref|XP_002503952.1| predicted protein [Micromonas sp. RCC299]
gi|226519219|gb|ACO65210.1| predicted protein [Micromonas sp. RCC299]
Length = 90
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 82/90 (91%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWHAK+KDSAY++ GG+ FDLTEGD+LAVF+Q GEIVDVNLVR++ TGK RGFAF+ YED
Sbjct: 1 SWHAKFKDSAYIFAGGLSFDLTEGDILAVFSQYGEIVDVNLVRNEETGKSRGFAFICYED 60
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
QRST+LAVDNLNGA++LGRTI+V+HV Y+
Sbjct: 61 QRSTVLAVDNLNGAKVLGRTIKVEHVEDYR 90
>gi|125983973|ref|XP_001355751.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
gi|54644068|gb|EAL32810.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
Length = 157
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ ++ G+ SWH Y+DSA+++V G P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGK-KSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHV Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKE 119
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 120 NEKMDEETLRLYME 133
>gi|195156397|ref|XP_002019086.1| GL26176 [Drosophila persimilis]
gi|194115239|gb|EDW37282.1| GL26176 [Drosophila persimilis]
Length = 158
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ ++ G+ SWH Y+DSA+++V G P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGK-KSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY---KK 117
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHV Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKE 119
Query: 118 KEEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 120 NEKMDEETLRLYME 133
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GIS + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK RGFA++ YEDQRS LAVDNL GA I+ R IRVDH A+YK K++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDH-ARYKPKDDED 118
>gi|358381284|gb|EHK18960.1| hypothetical protein TRIVIDRAFT_44275 [Trichoderma virens Gv29-8]
Length = 320
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS DASWH Y+D+A+VY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR +RVDH A+Y+ +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDH-ARYQARDDEDQ 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|195384987|ref|XP_002051191.1| GJ13600 [Drosophila virilis]
gi|194147648|gb|EDW63346.1| GJ13600 [Drosophila virilis]
Length = 181
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ E +L SWH Y+DSA++++ G P+ L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLS--ELELKNPSAKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHVA YK ++
Sbjct: 59 EIVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKD 118
Query: 121 EDEETRQRMR 130
D+ + +R
Sbjct: 119 NDKLDEETLR 128
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 104/140 (74%), Gaps = 9/140 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+S +ASWHA Y+D+A++Y GG+P++LTEGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVSPEASWHADYRDTAFIYFGGLPYELTEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED- 122
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKARDDEDL 119
Query: 123 -------EETRQRMREERGV 135
E+ +R R E+G+
Sbjct: 120 EQYKVGWEDMLRRERAEKGL 139
>gi|358396474|gb|EHK45855.1| hypothetical protein TRIATDRAFT_283470 [Trichoderma atroviride IMI
206040]
Length = 332
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS DASWH Y+D+A+VY GG+P++L+EGD+ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIATIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR +RVDH A+Y+ +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDH-ARYQARDDEDQ 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|380025295|ref|XP_003696412.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Apis florea]
Length = 135
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 90/109 (82%), Gaps = 3/109 (2%)
Query: 26 ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
SWH +YK+SA++++GG+P+DLTEGD++ VF+Q GE+V++NL+RDK TGK +G+ F+ YE
Sbjct: 21 TSWHDQYKNSAWIFIGGLPYDLTEGDVITVFSQFGEVVNINLIRDKDTGKQKGYGFLCYE 80
Query: 86 DQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE---DEETRQRMRE 131
DQRSTILAVDN NG +ILGRTIRVDHV+ YK ++ DEET++ +E
Sbjct: 81 DQRSTILAVDNFNGTKILGRTIRVDHVSNYKAPKDSKNIDEETKKLRKE 129
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 100/140 (71%), Gaps = 9/140 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GI ASWH Y+D+A+VY GG+P++LTEGD++ +F+Q GE
Sbjct: 23 MNQIRAIQALNKKELENGIPPSASWHTDYRDTAFVYFGGLPYELTEGDVITIFSQYGEPT 82
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED- 122
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 83 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLIRVDH-ARYKARDDEDL 141
Query: 123 -------EETRQRMREERGV 135
E+ +R R E+G+
Sbjct: 142 EECKVGWEDVMRRERLEKGL 161
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D I +ASWH Y+D+AYVY+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCIPPNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGF F+ YEDQRS LAVDNL+GA ++GR I VDH +YKKKE E E
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH-TRYKKKEGEIE 119
>gi|195053126|ref|XP_001993480.1| GH13830 [Drosophila grimshawi]
gi|193900539|gb|EDV99405.1| GH13830 [Drosophila grimshawi]
Length = 180
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ E +L SWH Y+DSA+++V G P+ L+EGDL+ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLS--ELELKTPSAKSWHDMYRDSAWIFVAGFPYTLSEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHV YK
Sbjct: 59 EVVNINLVRDGKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKD 118
Query: 119 -EEEDEETRQRMRE 131
E+ DEET + E
Sbjct: 119 NEKLDEETLRLYME 132
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GIS + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK RGFA++ YEDQRS LAVDNL GA I+ R IRVDH +YK K++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDHT-RYKPKDDED 118
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 103/140 (73%), Gaps = 9/140 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+ +ASWHA Y+D+A++Y GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED- 122
+ LVRDK TGK +GF ++ YEDQRST LAVDNL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKMRDDEDL 119
Query: 123 -------EETRQRMREERGV 135
E+ +R R E+G+
Sbjct: 120 EEYKVGWEDMLRRERAEKGL 139
>gi|195997877|ref|XP_002108807.1| hypothetical protein TRIADDRAFT_17435 [Trichoplax adhaerens]
gi|190589583|gb|EDV29605.1| hypothetical protein TRIADDRAFT_17435, partial [Trichoplax
adhaerens]
Length = 119
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 90/119 (75%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ VK IQ IN E L S +WH +YK+SAYV++GG+ + LTEGD++ VF+Q GE+V
Sbjct: 1 ISNVKAIQKINETELHLTGSKSTTWHDQYKESAYVFIGGLAYGLTEGDIITVFSQYGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+N +RDK TGK +G+ F+AYEDQRST LAVDN NG ++L RTIRVDHV Y+ ++ED
Sbjct: 61 DINYIRDKKTGKTKGYCFLAYEDQRSTTLAVDNFNGIKLLDRTIRVDHVKNYRPPKDED 119
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++I+ +N +E + GI+ + SWHA Y+D+A+VY+GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNKIRQIKELNKRELEAGITPEGSWHADYRDTAFVYIGGLPYEVSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
VNLVRDK TGK +GFAF+ YEDQRS LAVDNL+GA+++GR I VDH +YKKKE E+
Sbjct: 61 YVNLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAKVMGRIISVDH-TRYKKKEGEE 118
>gi|195118872|ref|XP_002003957.1| GI20215 [Drosophila mojavensis]
gi|195137572|ref|XP_002012574.1| GI11259 [Drosophila mojavensis]
gi|193906408|gb|EDW05275.1| GI11259 [Drosophila mojavensis]
gi|193914532|gb|EDW13399.1| GI20215 [Drosophila mojavensis]
Length = 183
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ +E L SWH Y+DSA++++ G P+ L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLSEQE--LKNPSGKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK-- 118
E+V++NLVRD TGK +GF F+ YEDQRST+LAVDNLNG +I+ RT+RVDHVA YK
Sbjct: 59 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKD 118
Query: 119 -EEEDEETRQRMRE 131
E+ DEET E
Sbjct: 119 NEKLDEETLLLYME 132
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ + +E D GI D ASWH Y+ +AYV++GG+P++L+EGD++A+F+Q GE V
Sbjct: 1 MNQIRSTLALTRQEIDNGIPDSASWHKDYRHTAYVFIGGLPYELSEGDIIAIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
++L RDK TGK RGF ++ YEDQRST LAVDNL GA +LGRTIRVDH A+YK KE
Sbjct: 61 HLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNLTGAVVLGRTIRVDH-AEYKHKE 115
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 85/114 (74%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ IN +E + G+SD ASWH Y S +VYVGG+PF++ EGD++AV +Q GEI
Sbjct: 1 MNVIREIQSINKRELERGVSDKASWHQDYAHSPWVYVGGMPFEMNEGDIIAVMSQYGEIE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
D N+VR+K TGK +GF F+ YEDQRST LAVDNL G I+GR +RVDHV Y++
Sbjct: 61 DCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNLTGYNIMGRLLRVDHVKDYRR 114
>gi|449304345|gb|EMD00352.1| hypothetical protein BAUCODRAFT_28706 [Baudoinia compniacensis UAMH
10762]
Length = 304
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N E + + +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQVQRLNDVELEKCVPPNASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK +GFAF+ YEDQRS LAVDNL+GA ++GR I VDH +YKKKE E E
Sbjct: 61 HINLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAGVMGRVISVDHT-RYKKKEGEVE 119
>gi|313221560|emb|CBY36055.1| unnamed protein product [Oikopleura dioica]
gi|313239684|emb|CBY14576.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 87/116 (75%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+++ I +N KE G + + SWH +YKDSA++Y G + + LTEGD+LAVF+Q G
Sbjct: 1 MNILTKIRLINELNYKELRHGTNPENSWHMQYKDSAWIYAGNLSYKLTEGDILAVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
EI +VNLVRD+ TG +GF F+ YEDQRSTILAVDN NG ++ R +RVDHV +YK
Sbjct: 61 EISNVNLVRDRETGTSKGFCFICYEDQRSTILAVDNFNGMELCNRPVRVDHVEEYK 116
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK +GF ++ YE+QRST LAVDNL GA++ GR +RVDH A+Y +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYENQRSTDLAVDNLGGAEVGGRLLRVDH-ARYSMRDDEDQ 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
Query: 26 ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
+SWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V +NLVRDK TGK +GFAF+ YE
Sbjct: 3 SSWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYE 62
Query: 86 DQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
DQRST LAVDNL GA +LGR IRVDHV +YK+KEEE
Sbjct: 63 DQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 97
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GI+ + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RD+ TGK RGFA++ YEDQRS LAVDNL GA I+ R IRVDH A+YK K++ED
Sbjct: 61 WIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNLGGANIMDRIIRVDH-ARYKPKDDED 118
>gi|412991371|emb|CCO16216.1| RNA-binding motif protein, X-linked 2 [Bathycoccus prasinos]
Length = 336
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 124/213 (58%), Gaps = 17/213 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ+K Q + +E +LG+ + ASWHAKYK SAYV+VGGI +LTEGD+LA+ +Q G
Sbjct: 63 MNVLTQIKNQQDASLREIELGLPESASWHAKYKHSAYVFVGGIHSELTEGDVLAILSQYG 122
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIVDV + RD+ TGK +GFAFV Y DQRSTI+AVDNLNG+++LGR +RVDH Y
Sbjct: 123 EIVDVFVPRDEKTGKSKGFAFVCYLDQRSTIIAVDNLNGSKVLGRILRVDHCEDY----- 177
Query: 121 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 180
R+REE + + +C+ G F E+ G P++ + K E
Sbjct: 178 -------RLREEFN--KKILKWKCSLCGGDNFEGRERCFKCNGNAPKEA---YVEVKREE 225
Query: 181 FSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 213
+ SSS + +GN Q EEK
Sbjct: 226 EEGASSSSSSSEDDDEKEEKDGNEKQRGEEEEK 258
>gi|388857171|emb|CCF49184.1| related to rna binding motif protein [Ustilago hordei]
Length = 321
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 29/143 (20%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ + + ASWHA+Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREITRINQAELDIALGNPSASWHAQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEV 60
Query: 63 VDVNLVRDK----------------------------GTGKPRGFAFVAYEDQRSTILAV 94
VDVNL R + G GK RGF F+ Y+DQRST+LAV
Sbjct: 61 VDVNLPRAQSQPSRTQASGSNEEPKPEPEPEPEPKPVGKGKHRGFGFLMYQDQRSTVLAV 120
Query: 95 DNLNGAQILGRTIRVDHVAKYKK 117
DNLNGA +LGRT+RVDHVA YK+
Sbjct: 121 DNLNGAVVLGRTLRVDHVAGYKQ 143
>gi|346321453|gb|EGX91052.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 323
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK +GK +GF ++ YE+Q+ST LAVDNL GAQ+ GR +RVDH A+Y +++ED+
Sbjct: 61 FLKLVRDKESGKSKGFGWLKYENQKSTDLAVDNLGGAQVGGRLLRVDH-ARYSMRDDEDQ 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GI+ + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RD+ TGK RGFA++ YEDQRS LAVDNL GA I+ R IRVDH A+YK K++ED
Sbjct: 61 WIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNLGGANIMDRIIRVDH-ARYKPKDDED 118
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWHA Y+D+A++Y GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEQGIPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK +GF ++ YEDQRST LAVDNL+GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLSGAEIGGRLIRVDH-ARYKLRDDED 118
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN +E DLG++ ASWH YKDSAY++VGG+ +LTEGD++ +F+Q GE++DVN
Sbjct: 3 VREINKINERELDLGLT--ASWHDDYKDSAYIFVGGLNPELTEGDVITIFSQYGEVMDVN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
L R K TGK +GF F+ YEDQRST+LAVDNLNGA++L RT+RVDHV YK+
Sbjct: 61 LPRHKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQ 111
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+ ++LTEGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIEQGISPEASWHVDYRDTAYVYFGGLSYELTEGDVVTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ LVRD+ TGK +GF ++ YEDQRST LAVDNL GA+I GR +RVDH A+YK E++D
Sbjct: 61 FLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLVRVDH-ARYKPHEDDD 118
>gi|295666436|ref|XP_002793768.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277421|gb|EEH32987.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 280
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 126/223 (56%), Gaps = 11/223 (4%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEEGL 119
Query: 124 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHE----KFE 179
E + A E +RGD + + +RA G D R + K E
Sbjct: 120 EDNVA-----ALASAETGEEKSRGDDGE-AGRRRRAMKRGESNTDTEDRRIRQRPLLKEE 173
Query: 180 GFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHRE 222
+ ++ + R E+ S+R H E
Sbjct: 174 EELHKLIEEHDEEDPMKEYLIQEKKEEVARALERSSLRKKHTE 216
>gi|320162903|gb|EFW39802.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 293
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Query: 4 LTQVKRIQHINSKEADLGI----SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
+ V++IQ +N +E G+ S ASWH +++ SAYV+VGG P++LTEGDLL V +Q
Sbjct: 1 MNTVRQIQRVNERELQRGLTASQSSSASWHDEFRGSAYVHVGGFPYELTEGDLLCVMSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GEIVD+NLVRDK T K G+ F+AYEDQRST+LAVDNLNG +I RTIRVDHV Y+ +
Sbjct: 61 GEIVDINLVRDKKTNKSLGYCFIAYEDQRSTVLAVDNLNGIKIGNRTIRVDHVKDYRLTK 120
Query: 120 EEDE 123
+ E
Sbjct: 121 DLQE 124
>gi|397620275|gb|EJK65638.1| hypothetical protein THAOC_13484 [Thalassiosira oceanica]
Length = 227
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDA-SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V I IN E + G++ A SWH KY+DSA+VY G +P LTEGD+L + +Q GEI
Sbjct: 1 MNVVNEITRINDLELEQGLTHTAGSWHGKYRDSAWVYAGNLPHALTEGDVLCILSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
DVNLVRD TGK RGFAFV YED RS +LAVDN GAQ+LGRT+RVDHV +YK
Sbjct: 61 EDVNLVRDDDTGKSRGFAFVKYEDARSCVLAVDNFTGAQVLGRTLRVDHVERYK 114
>gi|328876029|gb|EGG24393.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 280
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 85/114 (74%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ IN E G S+ +SWH Y S +++ GG+PFDL EGD++ VF+Q GE+
Sbjct: 1 MNVVREIQRINRNEMTSGASETSSWHEDYSHSCWIFAGGMPFDLNEGDVVTVFSQYGEVD 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+ +LVR+K TGK +GFAF+ Y DQ+STILAVDNLNG +ILGRTIRVDHV Y+K
Sbjct: 61 EYDLVRNKETGKSQGFAFIKYMDQKSTILAVDNLNGVKILGRTIRVDHVKDYRK 114
>gi|320589446|gb|EFX01907.1| u2 snrnp component ist3 [Grosmannia clavigera kw1407]
Length = 353
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++IQ +N KE + GIS ASWH Y+D+A+VY GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNKIRQIQELNKKELEQGISPQASWHTDYRDTAFVYFGGLPFELSEGDVITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RD+ TGK +GF ++ YEDQRST LAVDNL GA I GR I VDH A+YK +++ED
Sbjct: 61 FLKLARDRETGKSKGFGWLKYEDQRSTDLAVDNLGGASISGRLIHVDH-ARYKARDDED 118
>gi|19113271|ref|NP_596479.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe 972h-]
gi|74676178|sp|O94290.1|IST3_SCHPO RecName: Full=U2 snRNP component ist3; AltName: Full=Complexed with
cdc5 protein 29; AltName: Full=RNA-binding protein cwf29
gi|3850101|emb|CAA21890.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe]
Length = 217
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E D S +SWH Y DSAY+Y+G + FDL E D+L VF++ GE V
Sbjct: 1 MNSIRQIERLNEQELDKPFS--SSWHQDYSDSAYIYIGNLDFDLNEDDILCVFSEFGEPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
D+NLVRDK TGK +GFAF+ YEDQRST+LAVDN+ ++L R +RVDHVA YK ++E E
Sbjct: 59 DINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNMTNVKLLDRLVRVDHVASYKVPQKEKE 118
>gi|427781965|gb|JAA56434.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 109
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 81/102 (79%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LG+++ SWH KYKDSA++++GG+ + LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQI 102
E+V++NL+RDK TGK +G+ F+ YEDQRST+L+VDNLNG +
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISV 102
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 83/113 (73%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++K ++ + +E D ASWH +YKDSAY+Y+GG+ + + EGD+ VF+Q GE+V
Sbjct: 1 MNRIKNVERLTQRELDTLTPYHASWHYEYKDSAYIYIGGLNYRMNEGDIAIVFSQFGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
D L RD+ TGK +GFAF+AYEDQ+ST+LAVDNLNG + GR I VDHV +YK
Sbjct: 61 DCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRLISVDHVMQYK 113
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + ASWHA Y+D+A++YVGG+ DLTEGD++ +F+Q G
Sbjct: 1 MNAIRQTQLLNKRELENATPPSASWHADYRDTAWIYVGGLHSDLTEGDVVTIFSQFGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NL+RDK TGK +GF F+ YEDQRS LAVDNL GA++LGR +RVDH +YKKK++EDE
Sbjct: 61 HLNLIRDKETGKSKGFGFLKYEDQRSCDLAVDNLGGAEVLGRLLRVDHT-RYKKKDDEDE 119
Query: 124 ETRQRMREERGV 135
+T + R E+ V
Sbjct: 120 DTYRIDRWEQEV 131
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N +E + GI+ + SWH Y+D+A++Y GG+P+DLTEGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQELNRREIENGITPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ L RDK TGK +GF ++ YEDQRST LAVDNL GA I GR I VDH A+YK +++ED
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADIGGRMISVDH-ARYKARDDEDP 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|241605858|ref|XP_002406132.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215502625|gb|EEC12119.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 114
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 81/100 (81%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LGI++ SWH KYKDSA+++VGG+ ++LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGINEKTSWHKKYKDSAWIFVGGLDYELTEGDIICVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGA 100
EIV++NL+RDK TGK +G+ F+ +EDQRST+L+VDNLNG
Sbjct: 61 EIVNINLIRDKKTGKSKGYCFLCFEDQRSTVLSVDNLNGI 100
>gi|365981695|ref|XP_003667681.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
gi|343766447|emb|CCD22438.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
Length = 169
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K IQ IN KE D+GI S++ SWH +YKD AY+Y+GG+P DLTE D+L VF+Q G
Sbjct: 1 MNQIKSIQRINQKELDVGILSEEQSWHHEYKDQAYIYIGGLPRDLTEADILTVFSQFGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
VD+ LVRD +G+ +GFA++ YEDQRSTILAVDNLNG ++ G TI VDH
Sbjct: 61 VDIFLVRDHQSGESKGFAYLKYEDQRSTILAVDNLNGTKLNGNTIHVDH 109
>gi|398412159|ref|XP_003857408.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
gi|339477293|gb|EGP92384.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
Length = 329
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E + I +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELEKVIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRDK TGK RGF F+ YEDQRS LAVDNL+GA ++G+ + VDH +YKKKE E E
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGKVLSVDH-TRYKKKEGEVE 119
>gi|302420537|ref|XP_003008099.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
gi|261353750|gb|EEY16178.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
Length = 333
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N +E + GIS +ASWH Y+D+A++Y GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKQEIENGISPEASWHVDYRDTAFIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK +GF ++ YEDQRST LAVDNL GA I R +RVDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNLGGATIGSRMVRVDH-ARYKFRDDED 118
>gi|422295618|gb|EKU22917.1| u2 snrnp component ist3 [Nannochloropsis gaditana CCMP526]
Length = 121
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ IQ +N KE G + + SWH +YKDSA+V+VG +P L+EGD+L V +Q GEI
Sbjct: 1 MNVVREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPSQLSEGDVLCVMSQWGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D++LVRDKGTGK +GFAF+ YEDQRSTILAVDN+NG ++L RT+RVDH KY +E +
Sbjct: 61 EDLHLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYSLPKETE 120
>gi|116193997|ref|XP_001222811.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
gi|88182629|gb|EAQ90097.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
Length = 334
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+ +ASWH Y+D+A+VY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHTDYRDTAFVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ L RDK TG+ +GF ++ YEDQRST LAVDNL GA+I GR +RVDH A+YK +++ED
Sbjct: 61 FLKLARDKETGRSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRMVRVDH-ARYKLRDDEDP 119
Query: 124 E 124
E
Sbjct: 120 E 120
>gi|319433481|gb|ADV57656.1| RNA-binding protein [Bursaphelenchus xylophilus]
gi|319433483|gb|ADV57657.1| RNA-binding protein [Bursaphelenchus xylophilus]
Length = 316
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDAS--WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MN T+++ +N KE LG + D S WH+ YK+SA+++VGG+ + LTEGDLLAVF+Q
Sbjct: 1 MNHKTKIRLQNELNEKELSLGYAGDTSKSWHSVYKESAWIHVGGLDYGLTEGDLLAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
GEI +VN++RD T K +GFAF+ Y+DQRST+LAVDN NG +I GR I+VDHV +K
Sbjct: 61 YGEICNVNIIRDYKTLKSKGFAFICYQDQRSTVLAVDNFNGIKIAGREIKVDHVESFKPP 120
Query: 119 EEEDEETRQRMREERGVC 136
+ ++ M+ R C
Sbjct: 121 KYKENVPEALMKIWREGC 138
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D I +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
+NLVRDK TGK RGF F+ YEDQRS LAVDNL+GA ++GR I VDH +YKKK
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH-TRYKKK 114
>gi|448082856|ref|XP_004195240.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359376662|emb|CCE87244.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 82/114 (71%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + ISD ASWHA +KDS+Y+++G +P +L E D++ +F+Q G
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFKDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+NLV+DK TGKPRGF ++ YED RS ILAVDNLNG QI + I+VDHV Y K
Sbjct: 61 HINLVKDKETGKPRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYYLK 114
>gi|195137574|ref|XP_002012575.1| GI11260 [Drosophila mojavensis]
gi|193906409|gb|EDW05276.1| GI11260 [Drosophila mojavensis]
Length = 177
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH Y+DSA++++ G P+ L+EGD++ VF+Q GE+V++NLVRD TGK +GF F+ YED
Sbjct: 19 SWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYGEVVNINLVRDSKTGKSKGFCFLCYED 78
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMRE 131
QRST+LAVDNLNG +I+ RT+RVDHVA YK E+ DEET E
Sbjct: 79 QRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKDNEKLDEETLLLYME 126
>gi|389645911|ref|XP_003720587.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|351637979|gb|EHA45844.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|440472117|gb|ELQ41000.1| U2 snRNP component IST3 [Magnaporthe oryzae Y34]
gi|440483610|gb|ELQ63975.1| U2 snRNP component IST3 [Magnaporthe oryzae P131]
Length = 330
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N KE + GIS +ASWH Y+D+A+VY GG+ L+EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK RGF ++ YEDQRST LAVDNL GA I R +RVDH A+YK +++ED+
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDH-ARYKGRDDEDD 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|86196844|gb|EAQ71482.1| hypothetical protein MGCH7_ch7g889 [Magnaporthe oryzae 70-15]
Length = 290
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N KE + GIS +ASWH Y+D+A+VY GG+ L+EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+ LVRDK TGK RGF ++ YEDQRST LAVDNL GA I R +RVDH A+YK +++ED+
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDH-ARYKGRDDEDD 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|452848098|gb|EME50030.1| hypothetical protein DOTSEDRAFT_122130, partial [Dothistroma
septosporum NZE10]
Length = 114
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D + +ASWH Y+D+AYVY+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCVPLNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
+NLVRDK TGK +GF F+ YEDQRS LAVDNL+GA ++GR + VDH +YKKK
Sbjct: 61 HINLVRDKETGKSKGFCFIKYEDQRSCDLAVDNLSGAGVMGRVMSVDH-TRYKKK 114
>gi|408395588|gb|EKJ74767.1| hypothetical protein FPSE_05102 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GI+ + SWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQALNKKEIENGITPEGSWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK +GF ++ YEDQRST LAVDNL GA + GR + VDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADMGGRLVSVDH-ARYKMRDDED 118
>gi|310797734|gb|EFQ32627.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 331
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ VF+Q GE V
Sbjct: 1 MNKIRAIQELNRKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK +GF ++ YEDQRST LAVDNL GA I R I VDH A+YK E ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDH-ARYKFHENED 118
>gi|224009920|ref|XP_002293918.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970590|gb|EED88927.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 4 LTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V IQ IN E + G++ ASWH KYKDSA+++ G +P +LTEGD+L + +Q GEI
Sbjct: 1 MNVVNEIQRINDLELEKGLTHTSASWHDKYKDSAWIHAGNLPLNLTEGDVLCILSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KKEE 120
D++LVRDK +GK +GFAFV YED RS +LAVDNL G+ +LGRT+RVDHV Y+ K +
Sbjct: 61 DDIHLVRDKDSGKSKGFAFVKYEDARSCVLAVDNLCGSMVLGRTLRVDHVENYRLPKHIQ 120
Query: 121 EDEETRQRMREERG 134
E E+ + +E G
Sbjct: 121 EKEDGLNKEGDEEG 134
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 27/227 (11%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
VNLVRDK TGK +GFAF+ YEDQRST LAVDNL GA ++GR +RVDH +YK+K+ E+E
Sbjct: 61 HVNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDH-TRYKRKDGEEE 119
Query: 124 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGP-----QDRSSRWGHEKF 178
E V R + ++++ GG ++ S E+
Sbjct: 120 --------EDNVATIMGSTTGHRDEDTDTERRDRKSWRKGGDTDENDVEEPSRPMLKEEI 171
Query: 179 EGFSWGKNDSSSRATGSGRV---------ALEG----NPNQSDRREE 212
E ++ + ALE S RR++
Sbjct: 172 ELVELMRDHDDEDPMKEYLIQEKKEEVARALENLKSREKKSSSRRKD 218
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ V +I+ IN+++ +LG SWH +Y++SAY+Y+GG+ LTEGD++ + +Q GE+V
Sbjct: 1 MSLVNQIRTINARQLELG---GGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVV 57
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+V + RDK T KPRGFAFV YEDQRST+LAVDNL G+++L RT+RVDHV +K E + E
Sbjct: 58 NVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQE 117
Query: 124 ETRQRMREERGV 135
+ R E+ +
Sbjct: 118 TGLMKERSEQSL 129
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ V +I+ IN+++ +LG SWH +Y++SAY+Y+GG+ LTEGD++ + +Q GE+V
Sbjct: 1 MSLVNQIRTINARQLELG---GGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVV 57
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+V + RDK T KPRGFAFV YEDQRST+LAVDNL G+++L RT+RVDHV +K E + E
Sbjct: 58 NVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQE 117
Query: 124 ETRQRMREERGV 135
+ R E+ +
Sbjct: 118 TGLMKERSEQSL 129
>gi|363752215|ref|XP_003646324.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889959|gb|AET39507.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
Length = 173
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ E GI S++ASWH +YKD AY++ G+ +LTEGD+L +F+Q G
Sbjct: 1 MNQIRSIQKLSDSELQQGILSEEASWHYQYKDQAYIHFSGLNLELTEGDILTIFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+ L RD+ TG+ RGF ++ YEDQRSTILAVDNLNGA+I GRT++VDH + + E+ D
Sbjct: 61 TDLKLARDRDTGESRGFGYLKYEDQRSTILAVDNLNGAKICGRTLKVDHTFYHPRNEDVD 120
Query: 123 EETRQRMREERGVCR 137
+++ + V R
Sbjct: 121 YMNEMKLQLSKDVIR 135
>gi|380479686|emb|CCF42869.1| U2 snRNP component IST3 [Colletotrichum higginsianum]
Length = 333
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ VF+Q GE V
Sbjct: 1 MNKIRAIQALNKKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+ L RDK TGK +GF ++ YEDQRST LAVDNL GA I R I VDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDH-ARYKFRDDED 118
>gi|146422609|ref|XP_001487240.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
gi|146388361|gb|EDK36519.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
Length = 214
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN +E + +SD ASWHA Y+D++Y+YVG +P +L E D++A+F+Q G
Sbjct: 1 MAAIQKIIDINKRELEANVSDSASWHADYRDTSYIYVGYLPLELEEKDIVAIFSQYGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+NLVRD+ TGK RGF ++ YED RS +LA+DN NG Q+L + I+VDHV YK +E ++E
Sbjct: 61 HINLVRDRETGKSRGFCYLKYEDVRSCVLAIDNFNGVQLLNKRIKVDHVY-YKLREGQNE 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Sarcophilus harrisii]
Length = 310
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 74/85 (87%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
Y+++ +V++GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQRSTI
Sbjct: 13 YRENXWVFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTI 72
Query: 92 LAVDNLNGAQILGRTIRVDHVAKYK 116
LAVDN NG +I GRTIRVDHVA Y+
Sbjct: 73 LAVDNFNGIKIRGRTIRVDHVANYR 97
>gi|50290711|ref|XP_447788.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527099|emb|CAG60737.1| unnamed protein product [Candida glabrata]
Length = 169
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K IQ IN KE + GI + SWH +YKD AY+++GG+ LTEGDLL +F+Q G
Sbjct: 1 MNQIKAIQRINEKELEAGILKPEHSWHQEYKDQAYIFIGGLNRQLTEGDLLTIFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
VDV LVRDK T + +GFAF+ YEDQRSTILAVDNLNG + GR I+VDH+
Sbjct: 61 VDVLLVRDKETHESKGFAFLKYEDQRSTILAVDNLNGITVAGRQIKVDHI 110
>gi|169600369|ref|XP_001793607.1| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
gi|160705424|gb|EAT89749.2| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
Length = 373
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ +N +E + G+ + SWH Y+D+A++ +GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSVRAIQQLNKRELEAGVGTEGSWHTDYRDTAFINIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
V L RDK TGK RGFA++ YEDQRS LAVDNL G+ I+ R IRVDH A+YK + ED
Sbjct: 61 WVKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGSTIMDRVIRVDH-ARYKPMDGED 118
>gi|84999532|ref|XP_954487.1| RNA-binding protein [Theileria annulata]
gi|65305485|emb|CAI73810.1| RNA-binding protein, putative [Theileria annulata]
Length = 292
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E GI + SWH +YKDS Y+++GG+ +TEGD++ VF+Q GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK---E 119
+D+NL RDK TGK G+ F+ Y+DQRSTILAVDN NG+ +LGR IRVDHV Y E
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDYSAPVVYE 125
Query: 120 EEDEETRQRMREE 132
+E +E ++R+E
Sbjct: 126 DEVDEEGNKIRKE 138
>gi|294656886|ref|XP_459205.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
gi|199431815|emb|CAG87376.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
Length = 265
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 81/114 (71%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN KE + +SD ASWHA YKD++Y+Y+G +PFDL E D++ +F+Q G
Sbjct: 1 MNAIQKINKINQKELENNVSDSASWHADYKDTSYIYIGFLPFDLNEMDIVKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+NL++DK TGK RGF ++ YED +S +LA+DN NG Q+ + I+VDHV Y K
Sbjct: 61 HINLIKDKETGKSRGFCYLKYEDYKSCVLAIDNFNGTQLRDKKIKVDHVYYYLK 114
>gi|448087450|ref|XP_004196332.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359377754|emb|CCE86137.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 81/114 (71%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + ISD ASWHA ++DS+Y+++G +P +L E D++ +F+Q G
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFRDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
+NLV+DK TGK RGF ++ YED RS ILAVDNLNG QI + I+VDHV Y K
Sbjct: 61 HINLVKDKETGKSRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYYLK 114
>gi|255716984|ref|XP_002554773.1| KLTH0F13442p [Lachancea thermotolerans]
gi|238936156|emb|CAR24336.1| KLTH0F13442p [Lachancea thermotolerans CBS 6340]
Length = 134
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ QV+ IQ+++ +E + G+ S ASWH +Y+D AYVY+GG+ +LTEGD+L VF+Q G
Sbjct: 1 MNQVRSIQNLSLRELENGVLSPKASWHHEYRDQAYVYIGGLNKELTEGDVLTVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
VD+NLVRD+ TG+ +GF ++ +EDQRS+ILAVDNLNGA + GR I+VDH K E+
Sbjct: 61 VDINLVRDRETGESKGFCYLKFEDQRSSILAVDNLNGAVVAGRAIKVDHTV--YKPRGEN 118
Query: 123 EETRQRMREE 132
E RQ +R+E
Sbjct: 119 WEYRQAVRDE 128
>gi|221055439|ref|XP_002258858.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808928|emb|CAQ39631.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 287
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 84/116 (72%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E +D ASWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQASWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E +DVNLVRDK TGK +G+ F++YEDQRST+LAVDN NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|156096969|ref|XP_001614518.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803392|gb|EDL44791.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 299
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 83/116 (71%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E S+ SWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGSEQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E +DVNLVRDK TGK +G+ F++YEDQRST+LAVDN NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|291002051|ref|XP_002683592.1| RRM motif-containing protein [Naegleria gruberi]
gi|284097221|gb|EFC50848.1| RRM motif-containing protein [Naegleria gruberi]
Length = 284
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDD-ASWHAKYKD-SAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+ + K+I +N KE LG ++ +SWH + K+ +AY+Y+GG+ F LTEGDLL+VF+Q GE
Sbjct: 1 MKRAKQINELNQKELSLGYTNTPSSWHHQEKNRTAYIYIGGLDFRLTEGDLLSVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
IVD++LVR++ +GF F+AYED RSTILA+DNLNG ++ GR I VDH Y KK E
Sbjct: 61 IVDIDLVREEQELTSKGFCFIAYEDVRSTILAIDNLNGIELGGRIICVDHAPNYYKKIVE 120
Query: 122 DEETRQ 127
D E +Q
Sbjct: 121 DPEEQQ 126
>gi|156086052|ref|XP_001610435.1| RNA-binding protein [Babesia bovis T2Bo]
gi|154797688|gb|EDO06867.1| RNA-binding protein, putative [Babesia bovis]
Length = 248
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 85/123 (69%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + I ++ E + GI ++SWH +YKDS Y+++GG+ +TEGD++ VF+Q G+
Sbjct: 6 PSANISAISRLSEFELEKGIIGESSWHNRYKDSCYIFIGGLHRRMTEGDIIIVFSQFGDP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+D++L RDK TG RG+ F+ Y DQRSTILAVDN NG+ +LGR IRVDHV YK E +
Sbjct: 66 IDIHLKRDKKTGASRGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAPVEYE 125
Query: 123 EET 125
+E
Sbjct: 126 DEV 128
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 87/117 (74%), Gaps = 2/117 (1%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG ++ ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLGTTN-ASWHDQYKESSYIYIGNLDNRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GE +DVNLVRDK TGK +G+ F+AYEDQRSTILAVDN NG ++L + + VDH+ Y+
Sbjct: 60 GEPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYR 116
>gi|401406458|ref|XP_003882678.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
gi|325117094|emb|CBZ52646.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
Length = 279
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
++ + +N E ++ +ASWH Y++S+Y+++GG+ LTEGD++ VF+Q GE VD++
Sbjct: 20 IQAVWKLNELELKHNLTGEASWHWTYRNSSYIFIGGLDVRLTEGDIIIVFSQWGEPVDIH 79
Query: 67 LVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--KKEEEDE 123
LVRD+ TG P+GF F+AYEDQRSTILAVDN NG ++L T+RVDH Y+ +K+E+D+
Sbjct: 80 LVRDRKTGVPKGFCFLAYEDQRSTILAVDNANGMKLLNSTLRVDHCKNYRPPRKDEDDD 138
>gi|50307365|ref|XP_453661.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642795|emb|CAH00757.1| KLLA0D13420p [Kluyveromyces lactis]
Length = 166
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ +E + GI ++SWH +YKD AY+ GG+ +LTE D+L +F+Q G
Sbjct: 1 MNQIRSIQKLSERELECGILKPESSWHHEYKDQAYINFGGMHLELTEADILTIFSQYGCP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEE- 121
VD+ LVRD+ TGK +GF F+ YEDQRSTILAVDNLNGA++ GR IRVDH A Y+ + +E
Sbjct: 61 VDIKLVRDQTTGKSKGFGFLKYEDQRSTILAVDNLNGAKVCGRLIRVDH-AFYRPRSDEA 119
Query: 122 --DEETRQRM 129
+E RQ +
Sbjct: 120 EYEEAVRQEL 129
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ K IQ IN +EA LG+ ASWH +Y +S Y++VG + LTEGD++AVF Q G +
Sbjct: 1 MNITKEIQRINEREAALGLK--ASWHDEYANSPYIFVGNLDHGLTEGDIVAVFEQYGRVR 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY 115
D+N RDK TG P+GFAF+ Y+D RS ILAVDNLNG Q++GRT+RVDHV Y
Sbjct: 59 DLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNLNGIQLVGRTLRVDHVKNY 110
>gi|294942558|ref|XP_002783584.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
gi|239896081|gb|EER15380.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
Length = 191
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 86/121 (71%)
Query: 6 QVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
++ RI+ ++ +E + ASWH KY DSAY+Y+G + LTEGDL+ VF+Q GEI+DV
Sbjct: 9 EIDRIRQLSERELKDQTPEHASWHEKYHDSAYLYIGNLDRGLTEGDLITVFSQFGEILDV 68
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEET 125
NLVRDK TGK +GF F+AYEDQRST A+DN+ G ++GR ++VDHV Y+ ED E
Sbjct: 69 NLVRDKETGKSKGFGFLAYEDQRSTRYAIDNMIGFNLVGRPLKVDHVNSYRAPIVEDPEG 128
Query: 126 R 126
R
Sbjct: 129 R 129
>gi|68069647|ref|XP_676735.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496565|emb|CAH99460.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 189
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG +++ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLG-TNNASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
GE +DVNLVRDK TGK +G+ F+AYEDQRSTILAVDN NG ++L + + VDH+ Y+
Sbjct: 60 GEPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYR 116
>gi|210075519|ref|XP_501900.2| YALI0C16368p [Yarrowia lipolytica]
gi|199425287|emb|CAG82220.2| YALI0C16368p [Yarrowia lipolytica CLIB122]
Length = 320
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 85/130 (65%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IN++E G S ASWH Y D+AY+Y+GG+ LTE D+ VF+Q G
Sbjct: 1 MNAIRKTTQINNQELAEGTSISASWHNDYNDTAYIYIGGLESKLTEMDIATVFSQFGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
V L RD+ TGK RGFA++ YEDQRST+LAVDN NG ++LGRT+RVDH + EE D
Sbjct: 61 HVKLSRDQKTGKSRGFAWLKYEDQRSTVLAVDNFNGVELLGRTMRVDHTYYESRDEEGDA 120
Query: 124 ETRQRMREER 133
+ + + + R
Sbjct: 121 KEVEMLNKAR 130
>gi|403220621|dbj|BAM38754.1| RNA-binding motif protein, X-linked 2 [Theileria orientalis strain
Shintoku]
Length = 291
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E G + SWH +YKDS Y+++GG+ +TEGD++ VF+Q G+
Sbjct: 6 PAANTNAISRLSELELKRGTLGEGSWHHQYKDSCYIFIGGLDTRMTEGDIIIVFSQFGDP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+D+NL RDK TGK G+ F+ Y DQRSTILAVDN NG+ +LGR IRVDHV YK E +
Sbjct: 66 IDINLKRDKITGKSLGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVMDYKAPVEYE 125
Query: 123 EE 124
+E
Sbjct: 126 DE 127
>gi|148697138|gb|EDL29085.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Mus musculus]
Length = 296
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 31/136 (22%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK +GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVK------------------------------LIGGLPYELTEGDIICVFSQYG 30
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+ +E
Sbjct: 31 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 90
Query: 121 -EDEETRQRMREERGV 135
ED + R +E+G
Sbjct: 91 SEDVDDVTRELQEKGC 106
>gi|410084038|ref|XP_003959596.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
gi|372466188|emb|CCF60461.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
Length = 154
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ I+ I+ E GI S D SWH YKD AYV++GG+ DLTEGD+L +F+Q G
Sbjct: 1 MNQIRSIKKISENELHNGILSSDLSWHNDYKDQAYVFIGGLNKDLTEGDILTIFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
VD+ L RDK +G+ +GFAF+ YEDQRST+LA+DNLNG++I GR I+VDH A Y+ +++
Sbjct: 61 VDIYLARDKYSGESKGFAFLKYEDQRSTVLAIDNLNGSKIAGRIIQVDH-AFYEPRDDSK 119
Query: 123 EET 125
E T
Sbjct: 120 EYT 122
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 78/113 (69%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E GI + SWH +YKDS Y+++GG+ +TEGD++ VF+Q GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKY 115
+D+NL RDK TGK G+ F+ Y+DQRSTILAVDN NG+ +LGR IRVDHV Y
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDY 118
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
+WH ++KD+AY+YVGG+ DL+EGD++ +F+Q GEI D+N+ RDK TG RGF FV Y D
Sbjct: 2 NWHDEFKDTAYIYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMD 61
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
QRST+LAVDN++GA++LGR ++VDH A+YK+ + +EE
Sbjct: 62 QRSTVLAVDNMSGAEVLGRKLKVDH-ARYKQPGKRNEE 98
>gi|45187890|ref|NP_984113.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|44982674|gb|AAS51937.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|374107329|gb|AEY96237.1| FADR017Wp [Ashbya gossypii FDAG1]
Length = 173
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ E + GI S++ASWH +YKD AY++ G+ +LTEGD+L VF+Q G
Sbjct: 1 MNQIRSIQKLSETELEHGILSEEASWHYQYKDQAYIHFSGLNVELTEGDILTVFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+ LVRD+ TG+ RGF F+ YEDQRST+LAVDNLNG + GR ++VDH + + +ED
Sbjct: 61 TDLKLVRDRETGESRGFGFLKYEDQRSTVLAVDNLNGVNLCGRVLKVDHC--FYEPRDED 118
Query: 123 EETRQRMREERG 134
E + +REE
Sbjct: 119 EAYVKTVREELA 130
>gi|209877655|ref|XP_002140269.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555875|gb|EEA05920.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 76/96 (79%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
+ SWH+ Y++SAY+Y+GG+ + LTEGD++ VF+Q GE +DVNL+RD TGK +GF F+AY
Sbjct: 26 EGSWHSTYRNSAYIYIGGLNYGLTEGDIVIVFSQWGEPIDVNLIRDPKTGKSKGFCFLAY 85
Query: 85 EDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
EDQ+STILAVDN N +LG ++VDHV+ YK K +
Sbjct: 86 EDQQSTILAVDNANDMILLGNKLKVDHVSNYKVKSD 121
>gi|254585211|ref|XP_002498173.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
gi|238941067|emb|CAR29240.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
Length = 167
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K I+ IN E GI + + SWH +Y++ AY+++GG+ +LTE D+L VF+Q G
Sbjct: 1 MNQIKAIERINEAELSQGILTHEQSWHYEYRNQAYIFIGGLHKELTEADVLTVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
VD+ LVRD+ G+ RGFA++ YEDQRST+LAVDNLNGA + GR IRVDH A Y+ + ++D
Sbjct: 61 VDLKLVRDRENGESRGFAYLKYEDQRSTVLAVDNLNGAIVAGRRIRVDH-ALYEPR-DDD 118
Query: 123 EETRQRMREERGVCRAFQRGE 143
+ R+ +REE + GE
Sbjct: 119 WDYREAVREELDKDKVLVPGE 139
>gi|429328603|gb|AFZ80363.1| hypothetical protein BEWA_032160 [Babesia equi]
Length = 291
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + IQ ++ E G ++SWH +YKDS Y+Y+GG+ +TEGD++ VF+Q GE
Sbjct: 6 PGANISAIQRLSELELQTGAIGESSWHNRYKDSCYIYIGGLDKRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK---E 119
+D+NL R+ TG+ G+ F+ Y+DQRSTILAVDN NG+ +LGR IRVDHV YK E
Sbjct: 66 IDINLKRNGKTGESLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAPVIYE 125
Query: 120 EEDEETRQRMREE 132
+E +E ++R+E
Sbjct: 126 DECDEDGNKIRKE 138
>gi|389583407|dbj|GAB66142.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 208
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 83/116 (71%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E +D SWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E +DVNLVRDK TGK +G+ F++YEDQRST+LAVDN NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|156835802|ref|XP_001642166.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112599|gb|EDO14308.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 138
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K IQ IN E + G+ S SWH YKD AY+Y+G + DLTEGD+L VF+Q G
Sbjct: 1 MNKIKAIQKINENELENGVLSPSLSWHDTYKDQAYIYIGRLNKDLTEGDILTVFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
VD+ LVR+ TG RGFA++ YEDQRSTILAVDNLNGA+I G I VDH+
Sbjct: 61 VDIKLVRENETGSSRGFAYLKYEDQRSTILAVDNLNGAEIAGNAIVVDHI 110
>gi|403216110|emb|CCK70608.1| hypothetical protein KNAG_0E03510 [Kazachstania naganishii CBS
8797]
Length = 172
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 6 QVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVD 64
Q + IQ IN E D GI S + SWH +Y+D AY+++GG+ +LTEGD+L VF+Q G VD
Sbjct: 3 QARAIQKINQAELDSGIISPELSWHDEYRDQAYIFIGGLNKNLTEGDILTVFSQFGVPVD 62
Query: 65 VNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+ LVRD+ +G+ +GFA++ YEDQRSTILAVDN+NG +I GR ++VDH
Sbjct: 63 ILLVRDRNSGESKGFAYLKYEDQRSTILAVDNMNGVKIAGRMVQVDH 109
>gi|254565187|ref|XP_002489704.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029500|emb|CAY67423.1| hypothetical protein PAS_chr1-1_0468 [Komagataella pastoris GS115]
Length = 192
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +VK+I+ +N +E D I +ASWH +Y+DSAY+Y+G +P+++TE DLL +F+Q G
Sbjct: 1 MNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQYGVPT 60
Query: 64 DVNLVRDKGT-GKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
V L RD GK +GFAF+ YED RST LAVDNLNG +I RTI VDH Y+ +D
Sbjct: 61 HVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPAVYQD 119
Query: 123 EETRQRMREERGVCR 137
E+ + +E + R
Sbjct: 120 EDDERMDKEWEAMVR 134
>gi|366988985|ref|XP_003674260.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
gi|342300123|emb|CCC67880.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
Length = 171
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+++ K IQ IN +E GI + + SWH +YKD AY+Y+GG+ +LTEGD+++VF+Q G
Sbjct: 1 MSKAKSIQQINERELQSGILTTEQSWHYQYKDQAYIYIGGLDKELTEGDIISVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
VD+ LV D TG+ +GFAF+ YEDQRST+LA+DNLNG ++ TI+VDH + E+ D
Sbjct: 61 VDLLLVNDNQTGESKGFAFLKYEDQRSTVLAIDNLNGVKVGSNTIQVDHTFYEPRDEQWD 120
Query: 123 E-ETRQRMREERGVCRAF 139
ET + E+ V R
Sbjct: 121 YRETMKNELEKDFVVRGI 138
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+ + SWH Y+D+AY+Y GG+P++L+EGD++ +F+Q GE V + LVRDK TGK +GF ++
Sbjct: 4 TPEGSWHTDYRDTAYIYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWL 63
Query: 83 AYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
YEDQRST LAVDNL GA+I GR +RVDH A+YK +++ED E
Sbjct: 64 KYEDQRSTDLAVDNLGGAEIGGRLVRVDH-ARYKARDDEDPE 104
>gi|124505047|ref|XP_001351265.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|4494008|emb|CAB39067.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 309
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 83/116 (71%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ I+ +N E ++D+SWH +Y+DS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGLFDKIRNIEKLNEAELKNIGNNDSSWHDQYRDSSYIYIGNLDNRLTEGDIVIVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
E +DVNLVRD TGK +G+ F++Y DQRSTILAVDN NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDNETGKSKGYCFLSYADQRSTILAVDNFNGYKLLERPLVVDHILNYR 116
>gi|328350123|emb|CCA36523.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 268
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 4/139 (2%)
Query: 2 NP--LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
NP + +VK+I+ +N +E D I +ASWH +Y+DSAY+Y+G +P+++TE DLL +F+Q
Sbjct: 73 NPGSMNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQY 132
Query: 60 GEIVDVNLVRDKGT-GKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
G V L RD GK +GFAF+ YED RST LAVDNLNG +I RTI VDH Y+
Sbjct: 133 GVPTHVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPA 191
Query: 119 EEEDEETRQRMREERGVCR 137
+DE+ + +E + R
Sbjct: 192 VYQDEDDERMDKEWEAMVR 210
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+ + SWH Y+D+A++Y GG+P+DLTEGD++ +F+Q GE V + L RDK TGK +GF ++
Sbjct: 4 TPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWL 63
Query: 83 AYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
YEDQRST LAVDNL GA I GR I VDH A+YK +++ED E
Sbjct: 64 KYEDQRSTDLAVDNLGGADISGRMISVDH-ARYKPRDDEDPE 104
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pongo abelii]
Length = 317
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 75/94 (79%), Gaps = 3/94 (3%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDN 96
+ +GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN
Sbjct: 3 FSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDN 62
Query: 97 LNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 127
NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 63 FNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 96
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 75/94 (79%), Gaps = 3/94 (3%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDN 96
+ +GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN
Sbjct: 9 FSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDN 68
Query: 97 LNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 127
NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 69 FNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 102
>gi|399216607|emb|CCF73294.1| unnamed protein product [Babesia microti strain RI]
Length = 158
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 87/119 (73%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ ++ I+ ++ E + D++SWH +YKDS Y+Y+GG+ LTEGD++ VF+Q GE +
Sbjct: 1 MSGIEDIRKLSEAELKQDLRDESSWHYRYKDSCYIYIGGLHKKLTEGDIIIVFSQFGEPI 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+NLVRD TG+ +GF F+ Y +Q+STILAVDN+NG ++L + ++VDHV YK ++D
Sbjct: 61 DINLVRDSKTGESKGFCFLGYRNQKSTILAVDNMNGYKLLDKVLKVDHVLDYKAPLKKD 119
>gi|367017792|ref|XP_003683394.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
gi|359751058|emb|CCE94183.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
Length = 167
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 90/128 (70%), Gaps = 4/128 (3%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ IN E GI S + SWH +YKD AY+++GG+ +LTE D+L +F+Q G
Sbjct: 1 MNQIRAIQRINDTELSSGILSPNLSWHNEYKDRAYIFIGGLNVELTEADILTIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE-- 120
VDV LVRD+ TG +GF ++ YEDQRS +LA+DNLNG++I GR I+VDH A Y +++
Sbjct: 61 VDVFLVRDRETGDSKGFGYLKYEDQRSAVLAIDNLNGSKIAGRIIKVDH-AWYTPRDDMI 119
Query: 121 EDEETRQR 128
E +E QR
Sbjct: 120 EYQEAVQR 127
>gi|367000485|ref|XP_003684978.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
gi|357523275|emb|CCE62544.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
Length = 145
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 3/130 (2%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K I IN+ E + GI D SWH +Y+D AYVY+GG+ +LTE D+L +F+Q G
Sbjct: 1 MNKIKSINAINASELNSGILDASLSWHDEYRDQAYVYIGGLNKELTEHDILTIFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
D+ LVRDK T + +GFA++ YEDQRS +LA+DNLNG++I GR I VDHV + + ++D
Sbjct: 61 TDIKLVRDKETSESKGFAYLKYEDQRSCVLAIDNLNGSKIAGRNIVVDHV--FYEYRDDD 118
Query: 123 EETRQRMREE 132
E R ++ E
Sbjct: 119 LEYRNAVKSE 128
>gi|334349632|ref|XP_001381460.2| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Monodelphis domestica]
Length = 332
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 69/81 (85%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
+GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG
Sbjct: 1 LGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNG 60
Query: 100 AQILGRTIRVDHVAKYKKKEE 120
+I GRTIRVDHVA Y+ ++
Sbjct: 61 IKIRGRTIRVDHVANYRPPKD 81
>gi|149455712|ref|XP_001516504.1| PREDICTED: hypothetical protein LOC100086370, partial
[Ornithorhynchus anatinus]
Length = 258
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 42 GIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQ 101
G+P++LTEGD+L VF+Q GEIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +
Sbjct: 1 GLPYELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGFGFLCYEDQRSTILAVDNFNGIK 60
Query: 102 ILGRTIRVDHVAKYK-KKEEEDEETRQRMREERGV 135
I GRTIRVDHVA Y+ K+ ED + + ERG
Sbjct: 61 IKGRTIRVDHVANYRPPKDSEDVDDATKALRERGC 95
>gi|213401655|ref|XP_002171600.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|211999647|gb|EEB05307.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 234
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I+ +N KE LG S ASWH YKDSAY+Y+G + L E D++ +F++ G V
Sbjct: 1 MNTIREIERLNEKE--LGKSLSASWHQDYKDSAYIYIGNLDKSLNEHDVVRIFSEFGTPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
D++LVRDK T + RGFAF+ Y DQRSTILAVDN+ ++ R +RVDHVA Y+ E
Sbjct: 59 DIHLVRDKETKESRGFAFLKYADQRSTILAVDNMTNVKLHDRLVRVDHVANYRVPE 114
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 71/83 (85%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWHA Y DSAY+YVGG+ + LTEGD++ +F+Q GE VDV+L RDK TGK GFAF+AYED
Sbjct: 1 SWHANYADSAYIYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYED 60
Query: 87 QRSTILAVDNLNGAQILGRTIRV 109
QRST LAVDNLNG+++LGRT+RV
Sbjct: 61 QRSTNLAVDNLNGSKLLGRTLRV 83
>gi|145552619|ref|XP_001461985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429822|emb|CAK94612.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K I+ +N E L +WH +Y S+Y+++ + + + EGD+ VF+Q GEIVDV+L
Sbjct: 3 KTIKKLN--EVALDNIQATTWHDEYNKSSYIFIANLNYAMNEGDIAIVFSQYGEIVDVHL 60
Query: 68 VRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
VRDK TGK +GF F+AYEDQRSTILAVDN N A+I GR +RVDHV ++K +E
Sbjct: 61 VRDKITGKSKGFCFLAYEDQRSTILAVDNFNHAEICGRLLRVDHVREFKPPKE 113
>gi|118379871|ref|XP_001023101.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila]
gi|89304868|gb|EAS02856.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila
SB210]
Length = 1019
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/120 (55%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN T+VK Q+I KE G+ SWH YKDSAY+++GG+ +DL EGD+ VF+Q G
Sbjct: 741 MNNSTKVK--QYI-EKELKQGVETGQSWHNDYKDSAYIFIGGLNYDLNEGDISTVFSQWG 797
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
+IVD+ LVRDK TG+ +G+ F+AYEDQRSTILAV+N N + GR I V+HV+KYK E
Sbjct: 798 QIVDLRLVRDKKTGRSKGYCFLAYEDQRSTILAVENFNQINLCGRIIGVNHVSKYKPPRE 857
>gi|6322195|ref|NP_012270.1| Ist3p [Saccharomyces cerevisiae S288c]
gi|731908|sp|P40565.1|IST3_YEAST RecName: Full=U2 snRNP component IST3; AltName: Full=Increased
sodium tolerance protein 3; AltName: Full=U2 snRNP
protein SNU17
gi|557854|emb|CAA86207.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270052|gb|AAS56407.1| YIR005W [Saccharomyces cerevisiae]
gi|151943163|gb|EDN61498.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406218|gb|EDV09485.1| U2 snRNP component IST3 [Saccharomyces cerevisiae RM11-1a]
gi|256274151|gb|EEU09061.1| Ist3p [Saccharomyces cerevisiae JAY291]
gi|259147264|emb|CAY80517.1| Ist3p [Saccharomyces cerevisiae EC1118]
gi|285812652|tpg|DAA08551.1| TPA: Ist3p [Saccharomyces cerevisiae S288c]
gi|323337228|gb|EGA78482.1| Ist3p [Saccharomyces cerevisiae Vin13]
gi|323348164|gb|EGA82418.1| Ist3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354514|gb|EGA86351.1| Ist3p [Saccharomyces cerevisiae VL3]
gi|346228216|gb|AEO21093.1| IST3 [synthetic construct]
gi|349578956|dbj|GAA24120.1| K7_Ist3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765028|gb|EHN06543.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298728|gb|EIW09824.1| Ist3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 148
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
L RD+ TG+ +GFA++ YEDQRSTILAVDNLNG +I GR +++DH
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDH 106
>gi|323304472|gb|EGA58241.1| Ist3p [Saccharomyces cerevisiae FostersB]
gi|323308617|gb|EGA61859.1| Ist3p [Saccharomyces cerevisiae FostersO]
Length = 148
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
L RD+ TG+ +GFA++ YEDQRSTILAVDNLNG +I GR +++DH
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDH 106
>gi|357490655|ref|XP_003615615.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355516950|gb|AES98573.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 161
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/70 (81%), Positives = 63/70 (90%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA L IS+DASWH KYKDSAYV+VGGIPFD TEGD++AVFAQ G
Sbjct: 1 MNPLTLVKRIQLINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDIIAVFAQYG 60
Query: 61 EIVDVNLVRD 70
E+VDVNLVRD
Sbjct: 61 EVVDVNLVRD 70
>gi|401839237|gb|EJT42544.1| IST3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 149
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN +E GI S SWH++Y+D+AYVY+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQEINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
L RD+ TG+ +GFA++ YEDQRSTILAVDNLNG ++ GR +++DH KK
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTFYRPKK 113
>gi|46135807|ref|XP_389595.1| hypothetical protein FG09419.1 [Gibberella zeae PH-1]
Length = 306
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 26 ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
SWH Y+D+AY+Y GG+P++L+EGD++ +F+Q GE V + L RDK TGK +GF ++ YE
Sbjct: 10 GSWHTDYRDTAYIYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKSKGFGWLKYE 69
Query: 86 DQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
DQRST LAVDNL GA + GR + VDH A+YK +++ED
Sbjct: 70 DQRSTDLAVDNLGGADMGGRLVSVDH-ARYKMRDDED 105
>gi|260945497|ref|XP_002617046.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
gi|238848900|gb|EEQ38364.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 76/109 (69%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I +N KE +SD ASWHA YKD++Y+Y+G + DL + D+L +F+Q G
Sbjct: 1 MNAIQKILSMNEKELAQNVSDAASWHADYKDTSYIYIGNLHQDLKDEDILKIFSQYGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
+N+++DK TGK RGF ++ YED RS ILA+DNLNG +I R +++DH
Sbjct: 61 HLNMIKDKETGKSRGFCYLKYEDHRSCILAIDNLNGVKIFDRPMKIDHT 109
>gi|365760130|gb|EHN01872.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 167
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +I+ IN +E GI S SWH++Y+D+AYVY+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIREINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKK 118
L RD+ TG+ +GFA++ YEDQRSTILAVDNLNG ++ GR +++DH KK
Sbjct: 61 MLSRDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTFYRPKK 113
>gi|361127085|gb|EHK99065.1| putative Zinc finger CCCH domain-containing protein 42 [Glarea
lozoyensis 74030]
Length = 215
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
+ Y+Y+GG+PF+L+EGD++ +F+Q GE V +NL+RDK TGK +GFAF+ YEDQRST LAV
Sbjct: 41 TTYIYIGGLPFELSEGDIITIFSQFGEPVYINLIRDKETGKSKGFAFLKYEDQRSTDLAV 100
Query: 95 DNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
DNL G+ I+GRT++VDH +YKKK++ +E
Sbjct: 101 DNLGGSVIMGRTLKVDH-TRYKKKDDAPDE 129
>gi|340516662|gb|EGR46910.1| predicted protein [Trichoderma reesei QM6a]
Length = 93
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
S DASWH Y+D+A++Y GG+P+DL+EGD++ +F+Q GE V + LVRDK TGK +GF ++
Sbjct: 1 SPDASWHVDYRDTAFIYFGGLPYDLSEGDIITIFSQYGEPVFLKLVRDKETGKSKGFGWL 60
Query: 83 AYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
YEDQRST LAVDNL G +I GR +RVDH A+Y+
Sbjct: 61 KYEDQRSTDLAVDNLGGTEIGGRLLRVDH-ARYQ 93
>gi|328858704|gb|EGG07816.1| hypothetical protein MELLADRAFT_43078 [Melampsora larici-populina
98AG31]
Length = 133
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 81/135 (60%), Gaps = 24/135 (17%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ + IN KE LGI ASWH YKDSAY+Y+GG+ LTEGD++ +F+Q GE V
Sbjct: 1 MNNIRATKAINEKELALGIQ--ASWHDDYKDSAYIYIGGLDTGLTEGDVITIFSQYGEPV 58
Query: 64 DVNLVRDK----------------------GTGKPRGFAFVAYEDQRSTILAVDNLNGAQ 101
D+N+ + K G K RGF F+ YE+Q ST LAVDNLNGA
Sbjct: 59 DINMPKAKPEQTKNESGNPEEAKSQVKTKAGPVKSRGFCFLMYENQLSTNLAVDNLNGAI 118
Query: 102 ILGRTIRVDHVAKYK 116
+LGRT+RVDH YK
Sbjct: 119 VLGRTLRVDHCKNYK 133
>gi|300175056|emb|CBK20367.2| unnamed protein product [Blastocystis hominis]
Length = 301
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 75/113 (66%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ + +N KE + D SWH YKD ++Y GGI +L+EGD++ +F+Q GE+
Sbjct: 1 MNNIREVLRLNEKELENDTPFDCSWHQTYKDCPWIYFGGISPELSEGDIICMFSQWGEVE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
D+NL+RD TGK +GF F+ YE+ S +LAVDN +G ++LGR + VDH Y+
Sbjct: 61 DINLIRDHDTGKSKGFGFLRYENWLSCVLAVDNFSGMELLGRIVCVDHKRDYR 113
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Query: 4 LTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ +K I IN +E G++ ASWH +Y SA+VYVG + LTEGD++ V +Q GEI
Sbjct: 1 MNTIKEILRINEEELKRGLAGTAASWHQQYAQSAWVYVGNLDHALTEGDVICVLSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK 116
D++LVR++ TGK RGFAF YED RS +LAVDN G ++ GR++RVDHV Y+
Sbjct: 61 EDLHLVREEDTGKSRGFAFCKYEDARSCVLAVDNFTGIELCGRSLRVDHVENYR 114
>gi|82793516|ref|XP_728072.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484235|gb|EAA19637.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 347
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 88/143 (61%), Gaps = 28/143 (19%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG ++ ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLG-TNSASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGT--------------------------GKPRGFAFVAYEDQRSTILA 93
GE +DVNLVRDK T GK +G+ F+AYEDQRSTILA
Sbjct: 60 GEPIDVNLVRDKETGVLANLALLRVFRFSTIFIYHFFFILGKSKGYCFLAYEDQRSTILA 119
Query: 94 VDNLNGAQILGRTIRVDHVAKYK 116
VDN NG ++L + + VDH++ Y+
Sbjct: 120 VDNFNGFKLLDKPLVVDHISNYR 142
>gi|255731053|ref|XP_002550451.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132408|gb|EER31966.1| predicted protein [Candida tropicalis MYA-3404]
Length = 234
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK+I IN KE + S +SWH Y+D+ Y+Y+G IPF+L E D++ +F+Q G
Sbjct: 1 MNTVKQINQINQKELNSNTSYKSSWHYDYRDTNYIYIGNIPFNLNEKDIIIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+NL++DK TGK RGF F+ Y + +S ILA+DN NG ++ R +RVDH
Sbjct: 61 HINLIKDKETGKHRGFGFLKYANFKSCILAIDNFNGIKLGDRILRVDH 108
>gi|444324112|ref|XP_004182696.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
gi|387515744|emb|CCH63177.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
Length = 140
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
++Q K+IQ +N E I S + SWH Y D Y+++G + +LTEGD+L VF+Q G
Sbjct: 1 MSQYKKIQQLNDTELQNNILSIEKSWHYNYIDYGYIFIGNLNKNLTEGDILTVFSQFGNP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+D+ L+R+K T GFA++ YED RS ILA+DNLNG+++ G T+++DH K + D
Sbjct: 61 IDLKLIRNKQTNHSMGFAYLKYEDSRSCILAIDNLNGSKVAGNTLKIDHFWHDPNKNKND 120
Query: 123 EETRQ 127
EE Q
Sbjct: 121 EEYYQ 125
>gi|313224020|emb|CBY43539.1| unnamed protein product [Oikopleura dioica]
Length = 277
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA++Y G + + LTEGD+LAVF+Q GEI +VNLVRD+ TG +GF F+ YEDQRSTILAV
Sbjct: 1 SAWIYAGNLSYKLTEGDILAVFSQFGEISNVNLVRDRETGTSKGFCFICYEDQRSTILAV 60
Query: 95 DNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
DN NG ++ R +RVDHV +YK + D+
Sbjct: 61 DNFNGMELCNRPVRVDHVEEYKVPKIHDD 89
>gi|323333072|gb|EGA74473.1| Ist3p [Saccharomyces cerevisiae AWRI796]
Length = 104
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIR 108
L RD+ TG+ +GFA++ YEDQRSTILAVDNLNG +I GR ++
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALK 103
>gi|150866279|ref|XP_001385825.2| hypothetical protein PICST_48043 [Scheffersomyces stipitis CBS
6054]
gi|149387535|gb|ABN67796.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN KE S ASWH Y+D+ Y+Y+G I D+ E D++ +F+Q G
Sbjct: 1 MNSIQKINAINQKELATNTSYKASWHYDYRDTNYIYIGNIASDIEEKDIITIFSQYGVPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDE 123
+N+++DK TG+ RGFAF+ Y + +S +LAVDN NG + R +RVDH YK K++E+E
Sbjct: 61 HINMIKDKETGRHRGFAFLKYANMKSCVLAVDNFNGVVVYERKLRVDHTY-YKLKKDENE 119
Query: 124 E 124
+
Sbjct: 120 D 120
>gi|354473614|ref|XP_003499029.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cricetulus
griseus]
Length = 356
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 81/122 (66%), Gaps = 16/122 (13%)
Query: 29 HAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
H + K+SA V GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR
Sbjct: 41 HYEAKESA-VRTGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQR 99
Query: 89 STILAVDNLNGAQILG--------------RTIRVDHVAKYKKKEE-EDEETRQRMREER 133
ST+LAVDN NG ++ + IRVDHV+ ++ +E ED + R +E+
Sbjct: 100 STVLAVDNFNGIKVTAYYAGFDWIFPVYGSKDIRVDHVSSFRAPQESEDMDEVTRELQEK 159
Query: 134 GV 135
G
Sbjct: 160 GC 161
>gi|32398924|emb|CAD98389.1| putative RNA-binding protein, probable [Cryptosporidium parvum]
Length = 192
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%)
Query: 28 WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ 87
WH YK+S+Y+Y+ G+ LTEGD+ +F+Q GE +D+NL+RDK G +G+ F+ YEDQ
Sbjct: 49 WHNNYKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQ 108
Query: 88 RSTILAVDNLNGAQILGRTIRVDHVAKYK 116
+STILAVDN N +LG+ I+VDHV YK
Sbjct: 109 KSTILAVDNANDMILLGKHIKVDHVRDYK 137
>gi|320581779|gb|EFW95998.1| U2 snRNP component IST3 [Ogataea parapolymorpha DL-1]
Length = 172
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +V++IQ +N +E +LG ASWH +Y D++Y+++G +P ++ E DLL VF+Q G
Sbjct: 1 MNKVRKIQQLNERELELGTPIKASWHYEYADTSYIFIGNLPPEMNEMDLLIVFSQYGVPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILG--RTIRVDHV 112
+ L+RDK TG+ R FAF+ YE STILAVDNLNG G +RVDHV
Sbjct: 61 HLKLMRDKSTGQSRRFAFLKYEQFESTILAVDNLNGYS-FGDEYVLRVDHV 110
>gi|344304766|gb|EGW34998.1| hypothetical protein SPAPADRAFT_58120 [Spathaspora passalidarum
NRRL Y-27907]
Length = 218
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ + +I IN KE S +SWH Y+D+ Y+Y+G IP LT D++ +F+Q G
Sbjct: 1 MNSIHKINQINQKELATNTSYKSSWHYDYRDTNYIYIGNIPSSLTAQDIVIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+NLV+DK TG+ RGFAF+ Y +S ILA+DN NG ++ R +RVDH
Sbjct: 61 HLNLVKDKTTGEHRGFAFLKYAHFKSCILAIDNFNGIKVGDRNLRVDH 108
>gi|344228131|gb|EGV60017.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 215
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ + RI IN +E D +SD ASWH YKDS Y+++GG+ L E DL+ +F+Q G
Sbjct: 10 MNSINRINQINQQELDANVSDSASWHNDYKDSNYIFIGGLNAQLKEKDLIVIFSQYGLPT 69
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+ LV+D + +GF ++ Y+ +S +LAVDNLNG + + IRVDH
Sbjct: 70 HIKLVKDSEKKENKGFGYLKYQQFQSCVLAVDNLNGVVVYDKKIRVDH 117
>gi|395848769|ref|XP_003804091.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Otolemur garnettii]
Length = 373
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 14/141 (9%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ--- 58
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q
Sbjct: 32 SPLTKVKLINELNEREVQLGVADKVSWHSQYKDSAWIFLGGLPYELTEGDIICVFSQYLH 91
Query: 59 ---CGEIVDVNLVRDKGTGKP-RGFAFVAYEDQRSTILAVDN-LNGAQILGRTIRVDHVA 113
G V V G+ +P R F + S +D L +I GRTIRVDHV+
Sbjct: 92 PFPSGNFVSSLRVLHFGSLRPLRPFPSGPFVSLHS--FPLDTFLPSLRIKGRTIRVDHVS 149
Query: 114 KY---KKKEEEDEETRQRMRE 131
Y K EE DEETR R++E
Sbjct: 150 NYRAPKDSEELDEETR-RLQE 169
>gi|66475752|ref|XP_627692.1| RNA-binding protein [Cryptosporidium parvum Iowa II]
gi|46229304|gb|EAK90153.1| RNA-binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 153
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 64/85 (75%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
YK+S+Y+Y+ G+ LTEGD+ +F+Q GE +D+NL+RDK G +G+ F+ YEDQ+STI
Sbjct: 1 YKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQKSTI 60
Query: 92 LAVDNLNGAQILGRTIRVDHVAKYK 116
LAVDN N +LG+ I+VDHV YK
Sbjct: 61 LAVDNANDMILLGKHIKVDHVRDYK 85
>gi|68484767|ref|XP_713695.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
gi|68484858|ref|XP_713650.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435157|gb|EAK94545.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435204|gb|EAK94591.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
Length = 353
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + S +SWH Y+D+ Y+Y+G IP++LT DL+ +F+Q G
Sbjct: 94 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 153
Query: 64 DVNLVRDKGTGK-PRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+NL++DK + K RGF F+ Y + +S ILA+DN NG ++ R ++VDH YK + +E+
Sbjct: 154 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYKLRGDEN 212
Query: 123 EE 124
E+
Sbjct: 213 ED 214
>gi|238879122|gb|EEQ42760.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 258
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + S +SWH Y+D+ Y+Y+G IP++LT DL+ +F+Q G
Sbjct: 1 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGK-PRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEED 122
+NL++DK + K RGF F+ Y + +S ILA+DN NG ++ R ++VDH YK + +E+
Sbjct: 61 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYKLRGDEN 119
Query: 123 EE 124
E+
Sbjct: 120 ED 121
>gi|154416000|ref|XP_001581023.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915247|gb|EAY20037.1| hypothetical protein TVAG_365450 [Trichomonas vaginalis G3]
Length = 156
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 5 TQVKRIQHINSKEADLGISDD-ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ K IQ + E G+ D+ +S+H +KD ++ V + ++L+EGD+L VF Q G I+
Sbjct: 3 IKAKNIQKLQEIELRKGVFDELSSFHGDFKDCPWIKVNNLNYELSEGDILTVFEQYGTII 62
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+ L+RD TG RG A + YED RSTILAVDNLNG +LGRTI VDH
Sbjct: 63 NFELIRDAKTGDSRGTAIMEYEDWRSTILAVDNLNGITLLGRTISVDH 110
>gi|385303030|gb|EIF47131.1| rna binding domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 215
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++Q++ IQ +++ E + +ASWH Y D+A+V++G +P ++ E D+L +F+Q G
Sbjct: 1 MSQIQNIQKLSNAELEEATPFNASWHQDYNDTAWVFIGRLPPEMNEMDILIMFSQYGVPQ 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQIL-GRTIRVDHVAKYKK 117
+ L RD TG+ R FAF+ YED +S +LAVDN NG +I+ G I+VDHV +YKK
Sbjct: 61 SLKLARDAETGESRRFAFLKYEDFKSAVLAVDNFNGYEIIPGSRIQVDHV-RYKK 114
>gi|403370596|gb|EJY85165.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 360
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 47 LTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRT 106
+ EGD+ VF+Q GE+VD L RD+ TGK +GFAF+AYEDQ+ST+LAVDNLNG + GR
Sbjct: 1 MNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRL 60
Query: 107 IRVDHVAKYK 116
I VDHV +YK
Sbjct: 61 ISVDHVMQYK 70
>gi|448518692|ref|XP_003867973.1| U2 snRNP protein [Candida orthopsilosis Co 90-125]
gi|380352312|emb|CCG22537.1| U2 snRNP protein [Candida orthopsilosis]
Length = 269
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 14/178 (7%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K+I IN KE A S +SWH +Y+D+ Y+++ IP + DL+ +F+Q G
Sbjct: 1 MNKIKQINQINQKELASNTTSYKSSWHYEYRDTNYIFISNIPHSIKPHDLVIIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH-VAKYKKKEEE 121
+NLV++ TG RGFAF+ Y + +S ILA+DN NG +I R + VDH K ++ E+E
Sbjct: 61 THLNLVKNHETGGHRGFAFLKYANFKSCILAIDNFNGIKIGDRMLHVDHSYYKLRRGEKE 120
Query: 122 DEE------TRQRM-----REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQD 168
D+ R++M REE+ V + + GE + ++ + + G D
Sbjct: 121 DDYLIDYDGVRRQMEENSQREEKNV-KLIENGEESEPKAIEYKFKSEEKNESKGDEND 177
>gi|426259210|ref|XP_004023193.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Ovis aries]
Length = 304
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 5/79 (6%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK--- 116
GEIV++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+
Sbjct: 2 GEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLPE 61
Query: 117 KKEEEDEETRQRMREERGV 135
EE DE TR+ +ERG
Sbjct: 62 DSEEMDEVTRE--LQERGC 78
>gi|351699029|gb|EHB01948.1| RNA-binding motif protein, X-linked 2 [Heterocephalus glaber]
Length = 270
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GE+V++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHV+ Y+ +
Sbjct: 4 GEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPK 63
Query: 120 EEDE 123
E DE
Sbjct: 64 ESDE 67
>gi|354543955|emb|CCE40677.1| hypothetical protein CPAR2_107120 [Candida parapsilosis]
Length = 273
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++KRI IN KE A S +SWH +Y+D+ Y+++ IP + DL+ +F+Q G
Sbjct: 1 MNKIKRINQINQKELASSATSYKSSWHYEYRDTNYIFISNIPNFIKPHDLVVIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH-VAKYKKKEEE 121
+NL+++ TG+ RGFAF+ Y + +S +LA+DN NG ++ R + VDH K ++ E+E
Sbjct: 61 THLNLIKNHETGQHRGFAFLKYANFKSCVLAIDNFNGIKVGDRMLHVDHSYYKLRRGEKE 120
Query: 122 DE 123
D+
Sbjct: 121 DD 122
>gi|148697139|gb|EDL29086.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Mus musculus]
Length = 278
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GEIV++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG +I GRTIRVDHV+ Y+ +
Sbjct: 12 GEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQ 71
Query: 120 E-EDEETRQRMREERGV 135
E ED + R +E+G
Sbjct: 72 ESEDVDDVTRELQEKGC 88
>gi|167540183|ref|XP_001741597.1| U2 snRNP component IST3 [Entamoeba dispar SAW760]
gi|165893807|gb|EDR21934.1| U2 snRNP component IST3, putative [Entamoeba dispar SAW760]
Length = 135
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 69/104 (66%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K I ++ ++ + + SWH KYK++ +Y+GGI +L EGD++ VF+Q GE++D+N+
Sbjct: 9 KNISKLSEQDLEYSCKYEDSWHYKYKNNNEIYIGGIANELNEGDIIIVFSQFGEVIDINM 68
Query: 68 VRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+ + +GF F+ Y+D RS +LA+DN NG ++ GR + VDH
Sbjct: 69 PWNNDEDEHKGFCFLKYKDPRSCVLAIDNFNGIELNGRRLTVDH 112
>gi|241948671|ref|XP_002417058.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640396|emb|CAX44647.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 257
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE S +SWH Y+D+ Y+Y+G IPF+LTE D++ +F+Q G
Sbjct: 1 MNTIKQINQINQKELISNTSYKSSWHYDYRDTNYLYIGNIPFNLTEKDIIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKP-----------RGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
+NL++DK K RGF F+ Y + +S ILA+DN NG ++ R ++VDH
Sbjct: 61 HINLIKDKDKDKDKDKQETEKKYHRGFGFLKYSNFKSCILAIDNFNGIKLGDRYLKVDH- 119
Query: 113 AKYKKKEEEDEE 124
YK + +E+E+
Sbjct: 120 NYYKLRNDENED 131
>gi|291240642|ref|XP_002740229.1| PREDICTED: CG10466-like [Saccoglossus kowalevskii]
Length = 281
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKK 117
GEI ++NLVRDK TGK +GF F+ YEDQRST+LAVDN NG ++LGR +RVDHVA Y+K
Sbjct: 4 GEIANINLVRDKKTGKTKGFCFICYEDQRSTVLAVDNFNGTKLLGRILRVDHVADYRK 61
>gi|449499026|ref|XP_002194981.2| PREDICTED: brain mitochondrial carrier protein 1 [Taeniopygia
guttata]
Length = 349
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYK-KK 118
GE+V++NLVRDK TGK +GF F+ YEDQRSTILAVDN NG +I GRTIRVDHVA Y+ K
Sbjct: 11 GEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPK 70
Query: 119 EEEDEETRQRMREERG 134
E ED + R + +G
Sbjct: 71 ESEDWDDVTRALDAKG 86
>gi|429859411|gb|ELA34193.1| u2 snrnp component ist3 [Colletotrichum gloeosporioides Nara gc5]
Length = 318
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQELNKKEIEHGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFV 82
+ L RDK TGK +GF ++
Sbjct: 61 WLKLARDKETGKSKGFGWL 79
>gi|406607075|emb|CCH41590.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Wickerhamomyces ciferrii]
Length = 222
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 47 LTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRT 106
+GD+L +F+Q G V + L+RDK TGK RGF ++ YEDQRSTILAVDNLNGA++LGR
Sbjct: 9 FVKGDILIIFSQYGIPVHLKLIRDKETGKSRGFGYLKYEDQRSTILAVDNLNGAKVLGRI 68
Query: 107 IRVDHV 112
IRV+H
Sbjct: 69 IRVNHT 74
>gi|358419810|ref|XP_003584333.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 52 LLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
+L + + EIV++NLV DK TGK +GF F+ YEDQRSTILAVD+ NG +I GRTIRVDH
Sbjct: 1 MLDLGLRYREIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDH 60
Query: 112 VAKYK---KKEEEDEETRQRMREERGV 135
V+ Y+ EE DE TR+ +ERG
Sbjct: 61 VSNYRLPEDSEEMDEVTRE--LQERGC 85
>gi|307215083|gb|EFN89890.1| RNA-binding motif protein, X-linked 2 [Harpegnathos saltator]
Length = 87
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GEIV++NL+RDK TGK +GF F+ YEDQRSTILAVDN NG +ILGR IRVDHVA YK +
Sbjct: 7 GEIVNINLIRDKDTGKQKGFGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVANYKVPK 66
Query: 120 EE---DEETRQRMRE 131
+ DEETR+ +E
Sbjct: 67 DSKNIDEETRKLRKE 81
>gi|407033727|gb|EKE36960.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 112
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH KYKD+ +Y+GGI +L EGD++ VF+Q GE++D+N+ + + +GF F+ Y+D
Sbjct: 28 SWHYKYKDNNEIYIGGIASELNEGDMIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKD 87
Query: 87 QRSTILAVDNLNGAQILGRTI 107
RS +LA+DN NG ++ GRT+
Sbjct: 88 PRSCVLAIDNFNGIELNGRTL 108
>gi|67481301|ref|XP_656000.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473172|gb|EAL50615.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703174|gb|EMD43668.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 112
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 59/81 (72%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH KYKD+ +Y+GGI +L EGD++ VF+Q GE++D+N+ + + +GF F+ Y+D
Sbjct: 28 SWHYKYKDNNEIYIGGIASELNEGDIIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKD 87
Query: 87 QRSTILAVDNLNGAQILGRTI 107
RS +LA+DN NG ++ G+T+
Sbjct: 88 PRSCVLAIDNFNGIELNGKTL 108
>gi|440290535|gb|ELP83929.1| U2 snRNP component IST3, putative [Entamoeba invadens IP1]
Length = 135
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 70/104 (67%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
+ IQ ++ ++ + + ++SWH +YK++ +Y+GGI +L EGD++ VF+Q GE++D+++
Sbjct: 9 QNIQRLSEQDLEFSSTYESSWHYRYKENREIYIGGIAPELNEGDIIVVFSQYGEVIDIHM 68
Query: 68 VRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDH 111
D + +GF + Y++ +S +LAVDNLNG + + + VDH
Sbjct: 69 PWDSEGDRHKGFCLLTYKNPKSCVLAVDNLNGIVLNEKMLIVDH 112
>gi|149244636|ref|XP_001526861.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449255|gb|EDK43511.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 414
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 17/121 (14%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++++I IN KE A + +SWH Y+D+ YVY+G IP+ +T DLL +F+Q G
Sbjct: 1 MNKIRQINQINQKELASKSTTYKSSWHYDYRDTNYVYIGNIPYSITRNDLLVMFSQYGIP 60
Query: 63 VDVNLVRDKGT----------------GKPRGFAFVAYEDQRSTILAVDNLNGAQILGRT 106
+NL D T K RGFAF+ Y + +S ILA+DN NG ++ G
Sbjct: 61 THINLPLDTRTDNYNDGNDGKDEKNIAPKHRGFAFLKYANFKSCILAIDNFNGVKVGGAN 120
Query: 107 I 107
+
Sbjct: 121 V 121
>gi|307190798|gb|EFN74667.1| RNA-binding motif protein, X-linked 2 [Camponotus floridanus]
Length = 88
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKE 119
GE+V++NL+RDK TGK +G+ F+ YEDQRSTILAVDN NG +ILGR IRVDHV YK +
Sbjct: 7 GEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVTNYKAPK 66
Query: 120 EE---DEETRQRMRE 131
+ DEET + +E
Sbjct: 67 DSKNVDEETNKLRKE 81
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+TE L VF +CG I V T + RGF +V + ++ AV L
Sbjct: 121 IYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGPCEAAV-KL 179
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 157
+G ++GR + +D+ A+ + + EE +++++ +GVC FQ+G+CTRGD CKF+H Q
Sbjct: 180 DGMVVMGRPMSIDYGARDEGYAQAREELQKKLK--KGVCHKFQQGQCTRGDACKFAHVMQ 237
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
++D V+V G+P + + L F GE+ +V D+ TG+ RGF FV + + + +
Sbjct: 7 WRDRNKVFVAGLPVHVDDNALYEKFKPFGEMHQSKVVYDQKTGRSRGFGFVTFCEYTNAL 66
Query: 92 LAVDNLNGAQILGRTIRV 109
AVD LN ++ RT+ V
Sbjct: 67 DAVDQLNQSKWEKRTLNV 84
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+TE L VF +CG I V T + RGF +V + ++ AV L
Sbjct: 118 IYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGPCEAAV-KL 176
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 157
+G ++GR + +D+ A+ + + EE +++++ +G+C FQ+G+CTRGD CKF+H Q
Sbjct: 177 DGMVVMGRPMNIDYGARDEGYAQAREELQKKLK--KGICHKFQQGQCTRGDACKFAHVMQ 234
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
++D V+V G+P + + L F GE+ +V D+ TG+ +GF FV + + + +
Sbjct: 7 WRDRNKVFVAGLPSHVDDDALYEKFKSFGEMHQSKVVYDQKTGRSKGFGFVTFCEYSNAL 66
Query: 92 LAVDNLNGAQILGRTIRV 109
AVD LN ++ RT+ V
Sbjct: 67 DAVDQLNQSKWDKRTLNV 84
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
K + V+VG IP+D TE L +F + G +V+ LV D+ TGKP+G+ F ++DQ + +
Sbjct: 15 KSACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMS 74
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEE 120
A+ NLN +I GR +RVDH A + KEE
Sbjct: 75 AMRNLNSFEIGGRALRVDHAASERNKEE 102
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D+TE L +F++ G +V +V D+ TGKP+G+ F Y DQ + + A+ NL
Sbjct: 16 VFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMRE 131
NG +I GRT+RVD+ K + E +++ E
Sbjct: 76 NGYEIAGRTLRVDNACTEKSRLEMQSLMQEKTTE 109
>gi|156340730|ref|XP_001620537.1| hypothetical protein NEMVEDRAFT_v1g147835 [Nematostella
vectensis]
gi|156205583|gb|EDO28437.1| predicted protein [Nematostella vectensis]
Length = 52
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
+K IQ +N + ++G++DDASWH +YKDSAYV++GG+P+DLTEGD+L VF+Q
Sbjct: 1 IKNIQKLNDRMLEMGVTDDASWHKQYKDSAYVFIGGLPYDLTEGDILCVFSQ 52
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 88 NGREFSGRALRVDNAASEKNKEE 110
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 77 NGREFSGRALRVDNAASEKNKEE 99
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 76 NGREFSGRALRVDNAASEKNKEE 98
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 11 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 70
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 71 NGREFSGRALRVDNAASEKNKEE 93
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 20 VFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEET 125
NG ++ GR +RVD+ A K KEE + T
Sbjct: 80 NGHELNGRQLRVDNAASEKSKEELKQLT 107
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 29 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 88
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 89 NGREFSGRALRVDNAASEKNKEE 111
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 30 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 89
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 90 NGREFSGRALRVDNAASEKNKEE 112
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 52 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 111
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 112 NGREFSGRALRVDNAASEKNKEE 134
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 8 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 67
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 68 NGREFSGRALRVDNAASEKNKEE 90
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IPF TE L +F++ G IV + LV D TGKP+GFAFV YED + + A+ NL
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 98 NGAQILGRTIRVDHV--AKYKKKEEEDEETRQRMREERGV 135
NG GR +RV+ + +++ E+ Q+ R +GV
Sbjct: 71 NGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGV 110
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 86 NGREFSGRALRVDNAASEKNKEE 108
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 86 NGREFSGRALRVDNAASEKNKEE 108
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 74 NGYEIGGRTLRVDNACTEKSRLE 96
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V V + +D E D+ FA G I+DV + +D+ TG+PRG AFV Y Q AVD
Sbjct: 46 VLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDGG 105
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMRE------ERGVCRAFQRGECTRGDGCK 151
G LGR IR + + +K +E QR + RG+C ++ G+C RGD C+
Sbjct: 106 VG-DFLGREIRCEIATQQRKSRDEMRSGSQRRDDRPYAPRSRGMCYDWKAGKCDRGDSCR 164
Query: 152 FSHNE 156
F+H+E
Sbjct: 165 FAHSE 169
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+ G+ D E L ++ G++ DV L++DK TG+ RGFAFV YE LAV L
Sbjct: 14 VYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTYETSSDAALAVTGL 73
Query: 98 NGAQILGRTIRVDHVAK 114
NG + +G+ I+VDH K
Sbjct: 74 NGKEFMGKVIKVDHAKK 90
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 74 NGYEIGGRTLRVDNACTEKSRLE 96
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N + GR +RVD+ A K KEE
Sbjct: 78 NAFDLNGRPLRVDNAASEKSKEE 100
>gi|338729372|ref|XP_001492640.3| PREDICTED: cleavage stimulation factor subunit 2 [Equus caballus]
Length = 601
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVD----VNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
V+VG IP++ TE L VF++ G +V + LV D+ TGKP+G+ F Y+DQ + + A
Sbjct: 18 VFVGNIPYEATEEQLKDVFSEVGPVVSSGRVIRLVYDRETGKPKGYGFCEYQDQETALSA 77
Query: 94 VDNLNGAQILGRTIRVDHVAKYKKKEE 120
+ NLNG + GR +RVD+ A K KEE
Sbjct: 78 MRNLNGREFSGRALRVDNAASEKNKEE 104
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 76
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+G ++ GR +RVD+ A K KEE
Sbjct: 77 SGYELNGRQLRVDNAASEKNKEE 99
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NLNG
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 100 AQILGRTIRVDHVAKYKKKEE 120
+ GR +RVD+ A K KEE
Sbjct: 65 REFSGRALRVDNAASEKNKEE 85
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
+G IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NLNG
Sbjct: 456 LGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 515
Query: 100 AQILGRTIRVDHVAKYKKKEE 120
+ GR +RVD+ A K KEE
Sbjct: 516 REFSGRALRVDNAASEKNKEE 536
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 20 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR++RVD+ K + E
Sbjct: 80 NGYEIGGRSLRVDNACTEKSRME 102
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 17 EADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKP 76
+ADL + + + +YVG +PF ++E DL +F Q G++ ++NL+ DK TG+
Sbjct: 28 DADLRFELMLKEMSVFMNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQS 87
Query: 77 RGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVD 110
RGFAFV E ++ A++NLNG+ + GR I V+
Sbjct: 88 RGFAFVTMESSQAAQSAINNLNGSSVSGRQIVVN 121
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NLN
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 99 GAQILGRTIRVDHVAKYKKKEE 120
G + GR +RVD+ A K KEE
Sbjct: 65 GREFSGRALRVDNAASEKNKEE 86
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
K+ +YVG + +++TE + VF+ G+I V L + T K RGF +V + D S
Sbjct: 115 KNCTTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFYDTESCTK 174
Query: 93 AVDNLNGAQILGRTIRVDHV----AKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGD 148
A+ NG ++GR + VD A K+K EE E + ++G+C FQ C GD
Sbjct: 175 ALAT-NGKIVIGRPMHVDLSGEDDASIKQKREEMER-----KLKKGICNRFQSNSCLHGD 228
Query: 149 GCKFSH---NEQRAANTGGGP 166
CKF+H N++ +A T P
Sbjct: 229 ACKFAHVQKNQKESATTSVEP 249
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
++D V+V G+P D+ + L F G++ +V D TG+ +GF F+ Y +
Sbjct: 7 WRDRNKVFVAGLPRDVDDDALYNKFRAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDHAM 66
Query: 92 LAVDNLNGAQILGRTIRV 109
A+D NG GR + V
Sbjct: 67 DAIDKTNGKNWNGRVLNV 84
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF ++E DL +F Q G++ ++NL+ DK TG+ RGFAFV E ++ A+D+L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 98 NGAQILGRTIRVD 110
NG I GR I V+
Sbjct: 66 NGTSISGRQIVVN 78
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N + GR +RVD+ A K KEE
Sbjct: 78 NAFDLNGRPLRVDNAASEKSKEE 100
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IPFDLTE L +F++ G ++ LV D+ GKP+G+ F Y+D + A+ NL
Sbjct: 16 VFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETANSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 156
NG +I GR ++VD+ A +E+TR M+ Q E + F H E
Sbjct: 76 NGFEIGGRVLKVDNAA--------NEKTRMEMQ------NMIQANEPIQNSDNNFEHVE 120
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D+TE L +F++ G +V+ LV D+ TGKP+G+ F Y D + + A+ NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 98 NGAQILGRTIRVD 110
NG +I GR +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G ++ LV D+ +GKP+G+ F Y+D+ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEEE 121
NG ++ GR +RVDH + + +E
Sbjct: 78 NGRELHGRPLRVDHATSERNRNDE 101
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRNLRVDNACTEKSRME 98
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G ++ + LV D+ +GKP+G+ F Y+DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRALRVDNACTEKSRME 98
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+G+ F Y+DQ + + A+ NL
Sbjct: 17 VFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 76
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR +RVD+ K + E
Sbjct: 77 NGYEIGGRALRVDNACTEKSRME 99
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D+TE L +F++ G +++ LV D+ TGKP+G+ F Y D + + A+ NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 98 NGAQILGRTIRVD 110
NG +I GR +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D+TE L +F++ G +++ LV D+ +GKP+G+ F Y D + + A+ NL
Sbjct: 17 VFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATALSAMRNL 76
Query: 98 NGAQILGRTIRVD 110
NG +I GR +RVD
Sbjct: 77 NGYEINGRNLRVD 89
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ + + A+ NL
Sbjct: 8 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 67
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR++RVD+ K + E
Sbjct: 68 NGYEIGGRSLRVDNACTEKSRME 90
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L FA+ G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVD 110
+D +NG + GRTIRVD
Sbjct: 63 LDGMNGKSVDGRTIRVD 79
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L +F + G ++ + LV D+ TGKP+G+ F Y+D+ + + A+ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 154
NG GR +RVD+ K R E R E G+ C H
Sbjct: 78 NGYVFGGRPLRVDNACTEKS------------RMEMAALLHVNRAESPYGEHCSPQH 122
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR++RVD+ K + E
Sbjct: 76 NGYEIGGRSLRVDNACTEKSRME 98
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 21 GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFA 80
+ D A K + V+VG IP++ ++ L +F+Q G ++ LV D+ TGKP+G+
Sbjct: 11 AVKDQQMKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYG 70
Query: 81 FVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEET 125
F Y+D + A+ NLNG +I GR +RVD A K ED +
Sbjct: 71 FCEYKDSETAQSAMRNLNGTEIHGRQLRVDSAASQKGNGVEDPKA 115
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+++TE DL VF+ G + V++ D+ TG+PRGFAFV E + + A++ L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIETL 62
Query: 98 NGAQILGRTIRVD 110
NGA+ +GRT++VD
Sbjct: 63 NGAEWMGRTMKVD 75
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L +F + G ++ + LV D+ TGKP+G+ F Y+D+ + + A+ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG GR +RVD+ K + E
Sbjct: 78 NGYVFGGRPLRVDNACTEKSRLE 100
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VGG+P+ ++E DL VF++ GE+VD +V D+ TG+ RGF F++Y + S + L
Sbjct: 7 VFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIAAL 66
Query: 98 NGAQILGRTIRVDHVAKYKKKEEE 121
+G + GRTIRV+ +++++E
Sbjct: 67 DGQDLQGRTIRVNKAMTREQRDDE 90
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F++ G + LV D+ GKP+G+ F Y+D + A+ NL
Sbjct: 18 VFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALSAMRNL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIEGRTLRVDNACTEKNRLE 100
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRNLRVDNACTEKSRME 98
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
K + ++VG +PF ++E +L A+F + GE+V V+L+ D+ +G+PRGF FV Y++++S
Sbjct: 132 KGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKD 191
Query: 93 AVDNLNGAQILGRTIRV 109
AV NLNG + GR I V
Sbjct: 192 AVSNLNGMPLDGREISV 208
>gi|170583025|ref|XP_001896399.1| hypothetical protein Bm1_24695 [Brugia malayi]
gi|158596418|gb|EDP34761.1| hypothetical protein Bm1_24695 [Brugia malayi]
Length = 60
Score = 73.9 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S+ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L FA+ G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHV 112
++ +NG + GRTIRVD
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+ +E DL F+ CG + DV L D+ TG+PRGFAFV ++ + LA + L
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 98 NGAQILGRTIRVDHV 112
NG + GR I V+
Sbjct: 65 NGTDLGGRAITVNEA 79
>gi|31201653|ref|XP_309774.1| AGAP010918-PA [Anopheles gambiae str. PEST]
gi|21293399|gb|EAA05544.1| AGAP010918-PA [Anopheles gambiae str. PEST]
Length = 393
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F + G ++ + LV D+ +GKP+G+ F Y+DQ + + A+ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GR +RVD+ K + E
Sbjct: 76 NGYEFGGRALRVDNACTEKSRME 98
>gi|355681348|gb|AER96779.1| cleavage stimulation factor, 3 pre-RNA subunit 2, tau [Mustela
putorius furo]
Length = 174
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 43 IPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQI 102
IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ + + A+ NLNG +
Sbjct: 2 IPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 61
Query: 103 LGRTIRVDHVAKYKKKEE 120
GR +RVD+ A K KEE
Sbjct: 62 SGRALRVDNAASEKNKEE 79
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG PF TE ++ F+Q G + +V +V D+ TG+PRGFAFV Y D++S AV+ L
Sbjct: 7 VYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNEL 66
Query: 98 NGAQILGRTIRVD 110
NGA GR +RV+
Sbjct: 67 NGADFNGRQLRVN 79
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +D++E + ++F++ G ++ + +V D+ TGKP+G+ F+ + D ++ +A+ NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG ++ GR +RVD A EE
Sbjct: 80 NGYELSGRILRVDSAAGGMNMEE 102
>gi|402080986|gb|EJT76131.1| cleavage stimulation factor 64-kDa subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F++ G++++ LV D+ TGKP+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSRAGKVINFRLVYDRETGKPKGFGFAEYPDADSAASAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N ++I+GR +RVD
Sbjct: 70 NDSEIMGRKLRVDF 83
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E L+ VF G++V + LV D+ TGKP+G+ F + D + AV
Sbjct: 2 SKVVFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAV 61
Query: 95 DNLNGAQILGRTIRVD 110
NLNG +I GR +R+D
Sbjct: 62 RNLNGYEIGGRPLRID 77
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV Y+ +
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEE 120
AVD L+G + GR I V AKY E
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKYGPNAE 99
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV Y+ +
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKY 115
AVD L+G + GR I V AKY
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKY 94
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDN 96
V+VG IP+ L+E + +F++ G++++ LV D+ TGKP+GF F Y D S AV N
Sbjct: 9 VVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAVRN 68
Query: 97 LNGAQILGRTIRVDH 111
LN +I+GR +RVD
Sbjct: 69 LNDTEIMGRKLRVDF 83
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV Y+ +
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKY 115
AVD L+G + GR I V AKY
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKY 94
>gi|402221238|gb|EJU01307.1| hypothetical protein DACRYDRAFT_116497 [Dacryopinax sp. DJM-731
SS1]
Length = 320
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
+ DS V+VG IP+ +TE L+ VF G +V LV D+ TGKP+G+ F + D + +
Sbjct: 3 HPDSRVVFVGNIPYGMTEEALIEVFRTVGPVVGFRLVFDRETGKPKGYGFCEFPDHETAM 62
Query: 92 LAVDNLNGAQILGRTIRVD 110
AV NL+G ++ GR +RVD
Sbjct: 63 SAVRNLHGYEVQGRPLRVD 81
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+++TE DL VF+ G + V++ D+ TG+PRGFAFV E + + A++ L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT++VD
Sbjct: 63 DGAEWMGRTMKVD 75
>gi|168033388|ref|XP_001769197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679462|gb|EDQ65909.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D+ VYVGG+ ++ +E + F + GE+V V +V D+ +G+ RGF FV++ + RS +A
Sbjct: 3 DANSVYVGGLSYESSEDTVKKAFMEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +++G QI GRTIRV+ V K
Sbjct: 63 IRDMDGGQIEGRTIRVNEVRK 83
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G I F+LTE D++A F+ G I ++L +D TG+ RGF F+ Y + I A+ N+
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQNM 664
Query: 98 NGAQILGRTIRV 109
N I GR I+V
Sbjct: 665 NQKTISGRQIKV 676
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P++ TE + +F+ G +V +L + TG+ G+ F+ Y++ +S A+
Sbjct: 744 VYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAISTF 803
Query: 98 NGAQILGRTIRV 109
NG I GR ++V
Sbjct: 804 NGYDINGRQLKV 815
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF+LT DL VF + G++V V +V+DK T + +G AFV + +Q + V +
Sbjct: 11 VYVSNLPFNLTNNDLHKVFEKYGKLVKVTIVKDKTTRQSKGVAFVLFLNQNEANICVKST 70
Query: 98 NGAQILGRTIR 108
NG Q+ GRT++
Sbjct: 71 NGIQMFGRTLK 81
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
KDS V+VG I +D+TE +++ + +Q G ++ LV D+ TGKP+GF F Y D +
Sbjct: 1 MKDSKCVFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQ 60
Query: 92 LAVDNLNGAQILGRTIRVD 110
A+ NLN ++ GR IRVD
Sbjct: 61 SAIRNLNDLELKGRRIRVD 79
>gi|313240680|emb|CBY33001.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ TE DL+ +F+ GE+V ++ D+ TG+PRG F + D+ S A+D L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 98 NGAQILGRTIRVDH 111
NG GR +RVDH
Sbjct: 147 NGQDFNGRALRVDH 160
>gi|392560296|gb|EIW53479.1| hypothetical protein TRAVEDRAFT_60908 [Trametes versicolor
FP-101664 SS1]
Length = 392
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E L+ VF G++V + LV D+ TGKP+G+ F + D + + AV
Sbjct: 2 SKVVFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSAV 61
Query: 95 DNLNGAQILGRTIRVD 110
NLNG +I GR +R+D
Sbjct: 62 RNLNGQEIGGRPLRID 77
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ TE DL+ +F+ GE+V ++ D+ TG+PRG F + D+ S A+D L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 98 NGAQILGRTIRVDH 111
NG GR +RVDH
Sbjct: 147 NGQDFNGRALRVDH 160
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G +P+D TE L +F +CG + ++ LV ++ TGK +G+ FV ++D + + AV NL
Sbjct: 6 VFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSAVRNL 65
Query: 98 NGAQILGRTIRVDHVAKYK 116
NG + GR +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +D+TE + A+FA+ G ++ + +V D+ TGKP+G+ F+ + D + A+ L
Sbjct: 20 VFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTADTAIRVL 79
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG ++ GR +RVD A EE
Sbjct: 80 NGYELGGRVLRVDSAAGGMNMEE 102
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+ ++E ++ +F+ CG++++ LV DK TG+P+GF F+ Y D S A+ NL
Sbjct: 11 VFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIRNL 70
Query: 98 NGAQILGRTIRVDH 111
N ++ GRT+RVD
Sbjct: 71 NEYELNGRTLRVDF 84
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L A F + G I V+++RD+ T K RGF FV Y++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRVD K
Sbjct: 63 MDGMNGQTLDGRTIRVDEAGK 83
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE ++ +F+ G++V+ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D+ VYVGG+ + TE L F Q GE+V V +V D+ +G+ RGF FV + + R+ +A
Sbjct: 3 DTNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVA 62
Query: 94 VDNLNGAQILGRTIRVDHV 112
+ +++G QI GRTIRV+ V
Sbjct: 63 IQDMDGRQIEGRTIRVNEV 81
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+ ++E ++ +F + G++V+ LV DK TG+P+GF F+ Y D + AV NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 98 NGAQILGRTIRVDH 111
N + + GRT+RVD+
Sbjct: 71 NESDLNGRTLRVDY 84
>gi|223995751|ref|XP_002287549.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976665|gb|EED94992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG + F TE L F++ G IV V +V D TGKPRGFAF+ +ED ++ + A+ N+
Sbjct: 1 VFVGNLAFSTTEEQLYTAFSELGRIVKVRMVSDNDTGKPRGFAFIEFEDPQAALSAIRNM 60
Query: 98 NGAQILGRTIRVD 110
N +I GR IRV+
Sbjct: 61 NDYEINGRRIRVN 73
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G + FD TE D+ +FAQ G + +VNL+ DK TG+ RGF FV + AV NL
Sbjct: 4 LYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNL 63
Query: 98 NGAQILGRTIRVD 110
NG Q GR + V+
Sbjct: 64 NGKQWQGRALTVN 76
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE ++ +F+ G++++ LV D+ TG+P+GF FV + D S AV NL
Sbjct: 9 VFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASAVRNL 68
Query: 98 NGAQILGRTIRVD 110
N +I+ R +RVD
Sbjct: 69 NDHEIMNRKLRVD 81
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +++ E L VFAQ G +V + LV D+ TGKP+G+ F Y D ++ A+ NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 98 NGAQILGRTIRVDHVA 113
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +++ E L VFAQ G +V + LV D+ TGKP+G+ F Y D ++ A+ NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 98 NGAQILGRTIRVDHVA 113
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+ ++E ++ +F + G++V+ LV DK TG+P+GF F+ Y D + AV NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 98 NGAQILGRTIRVDH 111
N + GRT+RVD+
Sbjct: 71 NDFDLKGRTLRVDY 84
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE ++ +F+ G +V+ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE ++ +F+ G +V+ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
AV NLN +I+GR +RVD + + DE+ R R
Sbjct: 65 AVRNLNDYEIMGRKLRVD----FSNETVSDEDNRDR 96
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 4 LTQVKRIQHINSKEADLGIS-----------DDASWHAKYKDSAYVYVGGIPFDLTEGDL 52
LT + ++ SKEA L ++ D KY V+VG +P+D++E +L
Sbjct: 187 LTFYVKFKNAKSKEAALALNGEKYDGNLLRVDSCCAKRKYNCRTTVFVGNLPYDVSENEL 246
Query: 53 LAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHV 112
+A F G + V +VRD TG +GFAFVA++D + LA+ L+G+ R +R V
Sbjct: 247 IAHFEMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSAAVPLALQ-LDGSIFKRRPLRTKRV 305
Query: 113 AKYKKKEEEDEETRQR 128
+KK + +T QR
Sbjct: 306 ---QKKNKVKSQTYQR 318
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G + + TE DL AVFA GE+ V L D+ TGK RGFAFV + A+ L
Sbjct: 3 IYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVEMNEDAQEDAAISEL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
+GA+ +GR +RV+ K K KEE + E R R
Sbjct: 63 DGAEWMGRQLRVN---KAKPKEENNRENRPR 90
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
+S V+VG +P ++ + +L FA CG++ V L+RDKGTG +GF FV ++++ LA
Sbjct: 335 ESHTVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALA 394
Query: 94 VDNLNGAQILGRTIRVDHVAK--YKKKEEEDEETRQRMREER 133
++ + G ++ GR +RV +K KK + QR+R+ +
Sbjct: 395 LE-MAGRELCGRPVRVTEFSKQAAAKKASQQGTPGQRLRKAK 435
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S +YVG +PF TE +L +FAQ G + V+L+ DK +G+PRGF FV E Q AV
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 95 DNLNGAQILGRTIRVD 110
LNG GR + V+
Sbjct: 62 QALNGTDFGGRPLTVN 77
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM 18645]
Length = 101
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF ++E DL+ +FA+ G + V + DK TG+PRGFAFV + A+ L
Sbjct: 4 IYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIVRL 63
Query: 98 NGAQILGRTIRVD 110
NG+ + GRTI V+
Sbjct: 64 NGSHLSGRTIVVN 76
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+D++E ++ +F + G++V LV DK T +P+GF F+ Y D S AV NL
Sbjct: 11 VFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDADSAASAVRNL 70
Query: 98 NGAQILGRTIRVDH 111
N ++ GRT+RVD+
Sbjct: 71 NDFELNGRTLRVDY 84
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +D+TE + A+F++ G ++ + +V D+ TGKP+G+ F+ + D ++ A+ L
Sbjct: 19 VFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVL 78
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG ++ GR +RVD A EE
Sbjct: 79 NGHELGGRILRVDSAAGGMNMEE 101
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + F +TE DL+ F++ G++V V L +D+ TG+ RGFAFV + A+D L
Sbjct: 3 VYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG IP+ L+E + +F+ G +V LV D+ GKP+GF F Y D S AV
Sbjct: 1280 SKIVFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAV 1339
Query: 95 DNLNGAQILGRTIRVD 110
NLN +++GR +RVD
Sbjct: 1340 RNLNDYEVMGRKLRVD 1355
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE ++ +F+ G +++ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 9 VFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 68
Query: 98 NGAQILGRTIRVDH 111
N +I+ R +RVD
Sbjct: 69 NDYEIMNRKLRVDF 82
>gi|256073259|ref|XP_002572949.1| RNA binding protein [Schistosoma mansoni]
gi|353230968|emb|CCD77385.1| putative rna binding protein [Schistosoma mansoni]
Length = 547
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+D+ H K + V+VG +PFD TE ++ + + G I V L+RD TG RGF +V
Sbjct: 373 TDNDKTHCKLDNC--VFVGNLPFDCTEEEIYSTLSTLGSIKSVRLIRDSQTGAVRGFGYV 430
Query: 83 AYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMR 130
AY D LA+ + N I R IR + +YK K+ +++E Q+ +
Sbjct: 431 AYNDPSIIPLAIRSSNTLSIRERQIR---IMEYKVKKIKNKEGYQQTK 475
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F++T+ DL ++FA+ G + V L D+ TG PRGF FV E + + A++ L
Sbjct: 3 IYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEMESEAAESTAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTMKVN 75
>gi|358054768|dbj|GAA99146.1| hypothetical protein E5Q_05837 [Mixia osmundae IAM 14324]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+++G +P+D TE L F+ G +V LV D TGK +GF FV + D AV NL
Sbjct: 25 IFIGNLPYDATEQQLAEHFSSAGPVVGARLVFDHDTGKAKGFGFVEFYDANVATSAVRNL 84
Query: 98 NGAQILGRTIRVDH 111
NG Q LGR +RVDH
Sbjct: 85 NGEQFLGRALRVDH 98
>gi|429853390|gb|ELA28465.1| RNA-binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 314
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 98 NGAQILGRTIRVD 110
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVD 81
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D ++ A+ NL
Sbjct: 25 VFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQTAESAIRNL 84
Query: 98 NGAQILGRTIRVDHVA 113
NG ++ GR +RVD A
Sbjct: 85 NGYELNGRQLRVDSAA 100
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 360 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 419
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 420 EGFELAGRTLRVNTVHEKGTARYAQQDTLDE 450
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis UAMH
10762]
Length = 337
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+ ++E + +F + G +V LV DK T KP+GF F+ Y D + AV NL
Sbjct: 11 VFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDVDAAASAVRNL 70
Query: 98 NGAQILGRTIRVDH 111
N +++GRT+RVD+
Sbjct: 71 NEFEVMGRTLRVDY 84
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 360 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 419
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 420 EGFELAGRTLRVNTVHEKGTARYAQQDTLDE 450
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVDF 82
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
++ +NG + GR IRVD K
Sbjct: 63 LEGMNGKTLDGRAIRVDEAGK 83
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG I ++ +E L + +Q G I+ +V D+ TGKP+G+AF Y D + A+
Sbjct: 4 STTVFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAI 63
Query: 95 DNLNGAQILGRTIRVD 110
NLNG ++ GRT+RVD
Sbjct: 64 RNLNGTELNGRTLRVD 79
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E + A+DN+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNVAKPMKIKE 90
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++
Sbjct: 222 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALE 281
Query: 96 NLNGAQILGRTIRVDHV-----AKYKKKEEEDE 123
+ G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 282 QMEGFELAGRTLRVNTVHEKGTARYTQQDSLDE 314
>gi|374299476|ref|YP_005051115.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332552412|gb|EGJ49456.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 104
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G +PF TEGDL +FAQ G + VN++ D+ TG+PRGFAFV E I + L
Sbjct: 5 LYIGNLPFSATEGDLRTMFAQFGAVTRVNMITDRETGRPRGFAFVEIEGDVDGI--IRAL 62
Query: 98 NGAQILGRTIRVD 110
+G ++ GR ++V+
Sbjct: 63 DGYRMSGRVLKVN 75
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+L+E D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 400 LYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQM 459
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
+G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 460 DGFELAGRTLRVNTVHEKGSARYTQQDSLDE 490
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE L +F G +V LV D+ +GKP+G+ F ++D+ + + A+ NL
Sbjct: 15 VFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRNL 74
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
+G ++ GR++RVD A K K+
Sbjct: 75 SGYELNGRSLRVDSAASEKDKD 96
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P++LT+ DL +FA+ G I +V ++RD+ T + +GF FV D S AV L
Sbjct: 171 LYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVEMADLDSARKAVTIL 230
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDE 123
N +++GR I V AK +KK+ E
Sbjct: 231 NRIEVMGRRIIVTG-AKSEKKDSTQE 255
>gi|384498968|gb|EIE89459.1| hypothetical protein RO3G_14170 [Rhizopus delemar RA 99-880]
Length = 344
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG IPF+L+E L+ VF + G + L+ D+ TG+P+G+ F + D + AV
Sbjct: 8 SRVVFVGNIPFELSEEQLIEVFKEVGPVASFRLLFDRETGRPKGYGFCEFYDAETAASAV 67
Query: 95 DNLNGAQILGRTIRVDHVA 113
NLN +I GR +RVD+ A
Sbjct: 68 RNLNDYEIGGRQLRVDYAA 86
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF T+ + A FAQ GE+ DV++V D+ +G+ RGF FV A++N+
Sbjct: 5 LYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIENM 64
Query: 98 NGAQILGRTIRVD 110
NGA + GR +RV+
Sbjct: 65 NGAMMDGRPLRVN 77
>gi|324532508|gb|ADY49239.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 115
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG IP++ +E D+ F+Q G +V+V LV D+ TG+P+GF F + D+ S A++ L
Sbjct: 39 VYVGNIPYNCSEMDVGNFFSQAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAINTL 98
Query: 98 NGAQILGRTIRVD 110
NGA GR +RV+
Sbjct: 99 NGADFNGRALRVN 111
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A+
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 96 NLNGAQILGRTIRVDHV-----AKYKKKEEEDE 123
+ G ++ GRT+RV+ V KY +++ DE
Sbjct: 397 QMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDE 429
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL +VFA+ G + VNL D+ TG+PRGFAFV + + A++ L
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ + E L A F GEI +VN+ D TG RGF FV YE++ A+DN+
Sbjct: 19 LYVGGLEESVNEATLHAAFLPFGEIKEVNMPIDHATGTHRGFGFVEYEEKDDAAAAIDNM 78
Query: 98 NGAQILGRTIRVDHVAKYKKK 118
N A++ GR ++V++ K K
Sbjct: 79 NNAELFGRVLKVNYAQPMKIK 99
>gi|367018842|ref|XP_003658706.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
gi|347005973|gb|AEO53461.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
Length = 317
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
AV NLN +I+GR +RVD + + D++ R R
Sbjct: 65 AVRNLNDYEIMGRKLRVD----FSNETVSDDDNRDR 96
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A+
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 96 NLNGAQILGRTIRVDHV-----AKYKKKEEEDE 123
+ G ++ GRT+RV+ V KY +++ DE
Sbjct: 397 QMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDE 429
>gi|296414143|ref|XP_002836762.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295631601|emb|CAZ80953.1| unnamed protein product [Tuber melanosporum]
Length = 287
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE + +F+ G ++ LV D+ TG+P+GF F Y DQ + AV NL
Sbjct: 12 VFVGNIPYGLTEEQITEIFSSVGRVLSFRLVYDRETGRPKGFGFAEYSDQETAASAVRNL 71
Query: 98 NGAQILGRTIRVDH 111
+ +I+GR +RVD
Sbjct: 72 DNYEIMGRKLRVDF 85
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+D+ E L ++F+ G +V L+ DK TG+P+G+ F Y DQ + A+
Sbjct: 8 SCSVFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETAYAAM 67
Query: 95 DNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQR 141
NLN + GR +RVD D E +R GV R+ QR
Sbjct: 68 RNLNNVECGGRPLRVDW---------ADHE----LRNTEGVQRSIQR 101
>gi|50552626|ref|XP_503723.1| YALI0E09174p [Yarrowia lipolytica]
gi|49649592|emb|CAG79313.1| YALI0E09174p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG IP+D TE +L +F G ++ + L+ DK TG+ +G+ F Y D + A+ NL
Sbjct: 6 VYVGSIPYDQTEEQMLDIFKSVGPVISLKLMFDKETGRSKGYGFAEYPDADTARSAIRNL 65
Query: 98 NGAQILGRTIRVDH 111
NG Q+ R +RVDH
Sbjct: 66 NGFQVGSRQLRVDH 79
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F + G++ V +++DK T K +G AFV + D S L
Sbjct: 12 VYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFVLFMDPESASKCASAL 71
Query: 98 NGAQILGRTIRVDHVAKY 115
N ++GRT+R +AKY
Sbjct: 72 NNQLLMGRTLRAS-IAKY 88
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+G + +++TE DL AVFA+ GE+ V L D+ +G+ RGF FV +D+ + A++ L
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIEEL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTLKVN 75
>gi|413925480|gb|AFW65412.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 118
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVDH 111
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVDF 86
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 375 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 434
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V KY +++ DE
Sbjct: 435 EGFELAGRTLRVNTVHEKGTTKYAQQDSLDE 465
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEE 124
N +I+GR +RVD + K +E+ ++
Sbjct: 70 NDYEIMGRKLRVDFSNEQKSTDEDKDQ 96
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G ++ GR +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P V+R ++ K G +D S+ A +YVG + F+LT+ DL VF G+I
Sbjct: 408 PPPPVQR-SYVAPKPRGPGPNDPNSY-------ARLYVGSLNFNLTDDDLRQVFQPFGDI 459
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVD 110
V+L RD+ TGK +G+AFV +++ A++ +NG Q+ GR +RV+
Sbjct: 460 EYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVE 507
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
YK + + VG I ++ +E L + +Q G I+ +V D+ TGKP+G+AF Y D +
Sbjct: 18 YKTTNFDQVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMAL 77
Query: 92 LAVDNLNGAQILGRTIRVD 110
A+ NLNG ++ GRT+RVD
Sbjct: 78 SAIRNLNGTELNGRTLRVD 96
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 24 DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVA 83
D S H+K+ ++VG +P+D++E L F +CG I V LVRD+ +G +GF +V
Sbjct: 239 DRVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVL 298
Query: 84 YEDQRSTILAVDNLNGAQILGRTIRV 109
+E S +LA+ LNG+ + R IRV
Sbjct: 299 FESPDSVMLAL-KLNGSTLQQRKIRV 323
>gi|168044555|ref|XP_001774746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673901|gb|EDQ60417.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D+ V+VGG+ ++ +E + F + GE+V V +V D+ +G+ RGF FV++ + RS +A
Sbjct: 3 DANSVHVGGLSYESSEDAVKKAFIEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +++G QI GRTIRV+ V K
Sbjct: 63 IRDMDGGQIEGRTIRVNEVRK 83
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 24 DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVA 83
D S H+K+ ++VG +P+D++E L F +CG I V LVRD+ +G +GF +V
Sbjct: 240 DRVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVL 299
Query: 84 YEDQRSTILAVDNLNGAQILGRTIRV 109
+E S +LA+ LNG+ + R IRV
Sbjct: 300 FESPDSVMLAL-KLNGSTLQQRKIRV 324
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + +++T+ DL AVFA+ G + V L D+ TG+ RGF FV + + LA+D L
Sbjct: 3 VYVGNLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLAIDAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT+RV+
Sbjct: 63 DGAEWMGRTLRVN 75
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVDF 82
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D ++ A+ NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRNL 87
Query: 98 NGAQILGRTIRVDHVA 113
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D ++ A+ NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 98 NGAQILGRTIRVDHVA 113
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S +++GG+ + LTE D+ FA+ GE+ V L ++ +G+P+GF +V + Q + A+
Sbjct: 494 SNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKAL 553
Query: 95 DNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IR+D K
Sbjct: 554 ETMNGQALGGRPIRIDFAGK 573
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG + +++ L + F Q G ++D + D+ +G+ RGF +V + + A
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 98 NGAQILGRTIRVD 110
+G ++ GR +RVD
Sbjct: 456 HGKELDGRALRVD 468
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD GTG+ +G+AFV Y+ +A++ +
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQM 415
Query: 98 NGAQILGRTIRVDHV 112
+G ++ GRT+RV+ V
Sbjct: 416 DGFELAGRTLRVNSV 430
>gi|357157437|ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G ++ GR +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E A+DN+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNIAKPMKIKE 90
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF L E +L F + GE+ V ++ DK TG+ +GF FV D + A+D L
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 98 NGAQILGRTIRVD 110
NGA++ GRTI V+
Sbjct: 63 NGAEVNGRTIVVN 75
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 51/73 (69%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T+ DL AVFA+ G + V+L D+ TG+PRGFAFV + + A++ L
Sbjct: 3 IYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDMKVN 75
>gi|157112564|ref|XP_001657567.1| hypothetical protein AaeL_AAEL006197 [Aedes aegypti]
gi|108878012|gb|EAT42237.1| AAEL006197-PA [Aedes aegypti]
Length = 207
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY +PFDLT D+ +F + G++V V ++RDK T K +G AFV + + + L +L
Sbjct: 13 VYASSLPFDLTNIDVRKIFEKYGQVVRVTILRDKQTRKSKGVAFVLFSNAKEADLCCTSL 72
Query: 98 NGAQILGRTIRVDHVAKYKKKEEE 121
N ++ GRT++V +AK K +E
Sbjct: 73 NNVEMFGRTLKV-SIAKDNGKADE 95
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y GG+ ++ E L A F G+I+D+ + D T K RGFAF+ +E A+DN+
Sbjct: 9 IYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNLAKPQKIKE 90
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E A+DN+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNIAKPMKIKE 90
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + TE L +F+Q GE+ V L+ D+ TG+ +GF FVA D + + A++ L
Sbjct: 3 IYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEEL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG + GRT+R++ K KEE
Sbjct: 63 NGKEYDGRTLRINEA---KPKEE 82
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
++ +NG + GR IRVD K
Sbjct: 63 LEGMNGKTLDGRAIRVDEAGK 83
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHV 112
+D +NG + GR IRVD
Sbjct: 63 LDAMNGKTLDGRAIRVDEA 81
>gi|242067641|ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
gi|241934940|gb|EES08085.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
Length = 545
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P+ LT DL VF + G++V V ++RDK T + RG AF+ + D++S AV +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 98 NGAQILGRTIRV 109
N Q+ GRTI+
Sbjct: 72 NKKQMFGRTIKC 83
>gi|302683536|ref|XP_003031449.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
gi|300105141|gb|EFI96546.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
Length = 324
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P++++E +L+ VF GE+ LV D+ TGKPRG+ F + D + + AV
Sbjct: 5 SKVVFVGNVPYNMSEDELIDVFKNVGEVAGFRLVFDRETGKPRGYGFCEFTDHDTALSAV 64
Query: 95 DNLNGAQILGRTIRVD 110
NLN ++ GR +R+D
Sbjct: 65 RNLNNIEVKGRNLRID 80
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG + F+ TE L VF+ G ++ V LV D TGKPRGFAFV + D ++ + A+ N+
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 98 NGAQILGRTIRVD 110
N ++ GR IRV+
Sbjct: 61 NDYELNGRRIRVN 73
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++ E DL VFA+ G + V++ DK TG+PRGFAFV E + A++ L
Sbjct: 3 IYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT++VD
Sbjct: 63 DGAEWMGRTMKVD 75
>gi|359495190|ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 9 VFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|226528788|ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + FD TE DL AVFA+ G + V + D+ TG+ RGFAFV + A+D L
Sbjct: 3 IYVGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDEL 62
Query: 98 NGAQILGRTIRVD 110
GA+ +GRT++V+
Sbjct: 63 EGAEWMGRTLKVN 75
>gi|226443342|ref|NP_001139887.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
gi|221219686|gb|ACM08504.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
Length = 221
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F++ G++V V +V+DK T K +G AFV + D+ S +L
Sbjct: 12 VYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKESAQSCFRSL 71
Query: 98 NGAQILGRTIR 108
N Q+ GRT++
Sbjct: 72 NNKQLFGRTVK 82
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|209880680|ref|XP_002141779.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557385|gb|EEA07430.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 313
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 37 YVY-VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
Y++ VG + FD TE +L V + G ++ + +V DK TG RGF+F Y D + I+A+
Sbjct: 2 YIFIVGNVAFDATEDELREVMSAVGPVLSIRIVYDKDTGLSRGFSFCEYRDIETCIMAIK 61
Query: 96 NLNGAQILGRTIRVD 110
NLNG ++ GR IRVD
Sbjct: 62 NLNGYELRGRAIRVD 76
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IP+D TE L VF + G + ++ LV D+ TGK +G+ FV ++D + + AV N+
Sbjct: 6 VFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAVRNV 65
Query: 98 NGAQILGRTIRVDHVAKYK 116
NG + GR +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVD 110
+D +NG + GR IRVD
Sbjct: 63 LDAMNGKTLDGRAIRVD 79
>gi|242279861|ref|YP_002991990.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242122755|gb|ACS80451.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 88
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ +E D+ A F + GE++ V L+ D+ TG+PRGF FV ED+ I A++NL
Sbjct: 5 IYVGNLPWSSSEEDVRAAFEEFGEVISVKLINDRETGRPRGFGFVEMEDE-GAIQAIENL 63
Query: 98 NGAQILGRTIRVDH 111
+G+ GR ++V+
Sbjct: 64 DGSDFGGRNLKVNE 77
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE + +F + G ++ LV D+ TGKP+G+ F Y+D + + A+ NL
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMRNL 86
Query: 98 NGAQILGRTIRVDHVAK 114
N ++ GR +RVDH +
Sbjct: 87 NTRELHGRNLRVDHATR 103
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 54/73 (73%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++ + DL A+F++ GE+ +V+L +D+ TGK RGFAFV + + A+++L
Sbjct: 3 IYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIEDL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR+++V+
Sbjct: 63 DGAEWMGRSLKVN 75
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ DL VFA+ G + V L+ D+ TG+PRGF FV + + A++ L
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRALRVN 75
>gi|340924219|gb|EGS19122.1| putative polyadenylation factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 294
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G++++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGKVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +I+GR +RVD
Sbjct: 65 AVRNLNDYEIMGRKLRVDF 83
>gi|195649947|gb|ACG44441.1| hypothetical protein [Zea mays]
gi|414588426|tpg|DAA38997.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 130
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 98 NGAQILGRTIRVDH 111
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVDF 86
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 360 LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQM 419
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V +Y +E D+
Sbjct: 420 EGFELAGRTLRVNTVHEKGNVRYTPQESLDD 450
>gi|66362022|ref|XP_627975.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
gi|46227640|gb|EAK88575.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
Length = 304
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
VG +PFD TE +L V G ++ + +V DK TG RGF+F Y D + I+A+ +LN
Sbjct: 5 LVGNVPFDATEDELREVMNSAGPVLSMRIVHDKDTGLSRGFSFCEYRDIETCIMAIKSLN 64
Query: 99 GAQILGRTIRVD 110
G ++ GR+IRVD
Sbjct: 65 GYELRGRSIRVD 76
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D S AV NL
Sbjct: 9 VFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAVRNL 68
Query: 98 NGAQILGRTIRVDH 111
N + +GR +RVD
Sbjct: 69 NDYETMGRKLRVDF 82
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ TE D+ A F GE++ V LV D+ TG+PRGF FV +DQ + A+++L
Sbjct: 5 IYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEMDDQ-GALAAIESL 63
Query: 98 NGAQILGRTIRVDH 111
+G+ GR ++V+
Sbjct: 64 DGSDFGGRNLKVNE 77
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ TE D+ A F GE+ V L+ D+ TG+PRGF FV EDQ + A++NL
Sbjct: 5 IYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMEDQ-GALEAIENL 63
Query: 98 NGAQILGRTIRVDH 111
+G GR ++V+
Sbjct: 64 DGKDFGGRNLKVNE 77
>gi|336464258|gb|EGO52498.1| hypothetical protein NEUTE1DRAFT_72168 [Neurospora tetrasperma FGSC
2508]
Length = 321
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|341886179|gb|EGT42114.1| CBN-CYN-13 protein [Caenorhabditis brenneri]
Length = 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG ++TE L+A F G++V +++ D TGK RGF FV ++ +A+DN+
Sbjct: 13 LYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYETGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ G+TIRV+ K E
Sbjct: 73 NESELFGKTIRVNFARPPKATE 94
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 10 VFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 98 NGAQILGRTIRVD 110
G +I GR +RVD
Sbjct: 70 QGYEINGRQLRVD 82
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ TE ++ A F GE+V V L+ D+ TG+PRGF FV ED + A+DNL
Sbjct: 5 IYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDA-GAMEAIDNL 63
Query: 98 NGAQILGRTIRVDH 111
+G GR ++V+
Sbjct: 64 DGKDFGGRNLKVNE 77
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 52/73 (71%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL +VFA+ G + V++ D+ TG+PRGFAFV +++ A++ L
Sbjct: 3 IYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|350296344|gb|EGZ77321.1| hypothetical protein NEUTE2DRAFT_78674 [Neurospora tetrasperma FGSC
2509]
Length = 321
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|440796160|gb|ELR17269.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VGG+ D+ E DL + FA GEI ++ L++D TG+ +G+AFV + + LAV +
Sbjct: 403 VFVGGLGKDVNEADLYSAFANVGEIFEIRLMKDATTGESKGYAFVRFTSPKFAKLAVQQV 462
Query: 98 NGAQILGRTIRVDH 111
+GA + GR + V H
Sbjct: 463 DGAVLKGRKVGVVH 476
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YV +P D+ + + ++FA+ GEI + L ++ + + FAFV Y ++ + + A+D
Sbjct: 579 IYVCNLPVDVNDDLIRSLFAEFGEIERIVLSKNLKSARRDDFAFVNYTERSAALAAIDAR 638
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
+G + + DHV + E+ +QR
Sbjct: 639 HGYK-----VDDDHVLDVTLAKPVTEQDKQR 664
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LT+ D+ VF G+I V+L RD+ TGK +G+AFV +++ A++
Sbjct: 450 ARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAME 509
Query: 96 NLNGAQILGRTIRVDHVAK 114
+NG Q+ GR +RV+ A+
Sbjct: 510 KMNGFQLAGRALRVEIKAQ 528
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 399 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQM 458
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V +Y +++ DE
Sbjct: 459 EGFELAGRTLRVNTVHEKGTIRYTQQDSLDE 489
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P++LT+ DL +FA+ G I +V +VRD+ + + +GF FV D S A L
Sbjct: 33 LYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTKGFGFVEMADLDSARKAATVL 92
Query: 98 NGAQILGRTIRV 109
NG +I+GR I V
Sbjct: 93 NGIEIMGRRIIV 104
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ T +L +VF++ G + DV ++ DK T + RGFAFV AV
Sbjct: 123 IYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 182
Query: 98 NGAQILGRTIRVDH 111
NGA + GRTIRV+
Sbjct: 183 NGALLGGRTIRVNF 196
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 101
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+++T DL+ VFA+ G + V++ D+ TG+ RGFAFV E+ A+D L
Sbjct: 3 IYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETR 126
+GA+ + R +RV+ K K +E+ D R
Sbjct: 63 DGAEWMKRELRVN---KAKPREKRDSFNR 88
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+TE DL +VFA+ G + VNL D+ TG+PRGF FV + A++ L
Sbjct: 3 IYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 11 QHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRD 70
+HI + + IS S + K +YVGG+ ++ E L A F GEIVDV + D
Sbjct: 19 KHIQKNKKSINISYIMSTNTKRT----IYVGGLAEEVDEKILHAAFIPFGEIVDVQIPLD 74
Query: 71 KGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
+ K RGFAF+ +E A+DN+N +++ GRTIRV+ +AK +K +E
Sbjct: 75 YESEKHRGFAFIEFESAEDAATAIDNMNDSELFGRTIRVN-IAKPQKIKE 123
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 47 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAIDNM 106
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 107 NDSELFGRTIRVN-IAKPQKIKE 128
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ +++G + FD++E D+ F++ GE+ V L +D +G+P+GF +V + Q S A+
Sbjct: 301 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 360
Query: 95 DNLNGAQILGRTIRVDH 111
D + G ++ GR +R+D
Sbjct: 361 DAMTGQELAGRPLRLDF 377
>gi|367052583|ref|XP_003656670.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
gi|347003935|gb|AEO70334.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
Length = 332
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITELFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +++GR +RVD
Sbjct: 65 AVRNLNDHEVMGRKLRVDF 83
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 87
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ +E D+ A F GE++ V L+ D+ TG+PRGF FV ED + A+DNL
Sbjct: 5 IYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVEMEDN-GALDAIDNL 63
Query: 98 NGAQILGRTIRVDH 111
+G GR ++V+
Sbjct: 64 DGKDFGGRNLKVNE 77
>gi|321460847|gb|EFX71885.1| hypothetical protein DAPPUDRAFT_93311 [Daphnia pulex]
Length = 81
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A V+VG IP+ ++E L A+F++ G +V +V+D+ TG+ RGF F ++ S A+
Sbjct: 2 ASVFVGNIPYGVSEDQLKAIFSEAGPVVSFRIVQDRETGRSRGFGFCEFQSPDSAQTAMR 61
Query: 96 NLNGAQILGRTIRVD 110
NLNG ++ GR++RVD
Sbjct: 62 NLNGYELNGRSLRVD 76
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + F LTE D+ ++F+ CGE++ V L RD GK +G+AFV + D + LA++ L
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDN--GKSKGYAFVQFADAGAAKLAME-L 413
Query: 98 NGAQILGRTIRVD 110
NG ++ GR ++V+
Sbjct: 414 NGVEVAGRPLKVN 426
>gi|426194040|gb|EKV43972.1| hypothetical protein AGABI2DRAFT_194877 [Agaricus bisporus var.
bisporus H97]
Length = 341
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E L+ VF G+++ LV D+ TGKPRG+ F + D + + AV
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 95 DNLNGAQILGRTIRVD 110
NLN + GR +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|397635556|gb|EJK71910.1| hypothetical protein THAOC_06607 [Thalassiosira oceanica]
Length = 293
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+ G + F+ TE L F++ G++V V +V D+ TGK RGF+F+ +ED ++ + A+ N+
Sbjct: 161 VFCGNLAFNTTEEQLYNAFSEIGKVVKVRMVVDQETGKMRGFSFIEFEDPQAALSAIRNM 220
Query: 98 NGAQILGRTIRVD 110
N ++ GR +RV+
Sbjct: 221 NDYEMNGRKLRVN 233
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++V I F+ TE + AV ++ G ++ + L++D +GKPRGF F YED + A NL
Sbjct: 25 IFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDAETARSACRNL 84
Query: 98 NGAQILGRTIRVD 110
G ++ GR +R+D
Sbjct: 85 AGRELNGRPLRID 97
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E +L VF + G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 5 DEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDA 64
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
++ +NG + GR IRVD K
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGK 85
>gi|336261134|ref|XP_003345358.1| hypothetical protein SMAC_04589 [Sordaria macrospora k-hell]
gi|380090609|emb|CCC11604.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 93 AVDNLNGAQILGRTIRVDH 111
AV NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG I +D+TE + +F + G ++ + +V D+ TGKP+G+ F+ + D + A+ L
Sbjct: 14 VFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIRVL 73
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
NG ++ GR +RVD A EE
Sbjct: 74 NGYELGGRVLRVDSAAGGMNMEE 96
>gi|78778398|ref|YP_396510.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9312]
gi|78711897|gb|ABB49074.1| RNA-binding region RNP-1 [Prochlorococcus marinus str. MIT 9312]
Length = 222
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF D+L +FA GE+++ +L ++ TG+ RGFAFV D+ A+D L
Sbjct: 3 IFVGNLPFRAEREDVLQLFAPFGEVLNCSLPLERDTGRKRGFAFVEMADEAIESAAIDGL 62
Query: 98 NGAQILGRTIRVD 110
G +++GR +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|409078041|gb|EKM78405.1| hypothetical protein AGABI1DRAFT_114691 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E L+ VF G+++ LV D+ TGKPRG+ F + D + + AV
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 95 DNLNGAQILGRTIRVD 110
NLN + GR +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G + + +TE DL FA+ G++ V L D+ TG+PRGFAFV E + A++ L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + +TE DL FA+ G + V L D+ TG+PRGFAFV E A+D L
Sbjct: 3 IYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
+GA+ +GR ++V+ K K ED + R
Sbjct: 63 DGAEWMGRDLKVN-----KAKPREDRSSSPR 88
>gi|393244579|gb|EJD52091.1| hypothetical protein AURDEDRAFT_142864 [Auricularia delicata
TFB-10046 SS5]
Length = 334
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG +P+++ E L+ VF G++V LV D+ TGKPRG+ F + D + + AV NL
Sbjct: 9 VFVGNVPYNMGEEQLIDVFKNVGQVVGFRLVFDRETGKPRGYGFCEFADHETAMSAVRNL 68
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE 132
N + GR +R+D +A E TR + EE
Sbjct: 69 NNVIVDGRPLRID-LADSDPFLEGKTTTRGELPEE 102
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 77 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAIDNM 136
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 137 NDSELFGRTIRVN-IAKPQKIKE 158
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LT+ D+ VF G+I V+L RD+ TGK +G+AFV +++ A++
Sbjct: 450 ARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAME 509
Query: 96 NLNGAQILGRTIRVDHVAK 114
+NG Q+ GR +RV+ A+
Sbjct: 510 KMNGFQLAGRALRVEIKAQ 528
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDH 111
++ +NG + GRTIRV+
Sbjct: 63 MEGMNGQSLDGRTIRVNE 80
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDH 111
++ +NG + GRTIRV+
Sbjct: 63 MEGMNGQSLDGRTIRVNE 80
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 9 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 69 NDSELFGRTIRVN-IAKPQKIKE 90
>gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602071|ref|YP_966471.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153909|ref|YP_005702845.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450039|gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562300|gb|ABM28044.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234353|gb|ADP87207.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 89
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF +E D+ ++F GE+V V L+ D+ TG+PRGF FV D + A++ L
Sbjct: 5 LYVGNLPFSASEDDVRSLFTNYGEVVSVKLIMDRETGRPRGFGFVEMNDGDAGA-AIEAL 63
Query: 98 NGAQILGRTIRVDH 111
+GA +GR +RV+
Sbjct: 64 DGADFMGRALRVNE 77
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + FD T+ DL +F+ G + DV +++D+ +G+PRGFAFV+ E A++ L
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 98 NGAQILGRTIRVD 110
NG + +GR + ++
Sbjct: 61 NGEEFMGRNLTIN 73
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + +TE DL F++ G++ V L D+ TG+PRGFAFV E + A++ L
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG PF TE DL F+Q G + +V +V D+ TG+PRGFAFV + ++ + AVD
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 98 NGAQILGRTIRVD 110
NG GR +RV+
Sbjct: 66 NGVDFNGRALRVN 78
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ DL VFA G + V L D+ +G+PRGF FV E + + A+ L
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGARWMGRVLKVN---KAKPREE 82
>gi|268534532|ref|XP_002632397.1| C. briggsae CBR-CYN-13 protein [Caenorhabditis briggsae]
Length = 332
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG D+TE L+A F G++V +++ D +GK RGF FV ++ +A+DN+
Sbjct: 13 LYVGGFSEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ G+TIRV+ K E
Sbjct: 73 NESELFGKTIRVNFARPPKATE 94
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ +++G + FD++E D+ F++ GE+ V L +D +G+P+GF +V + Q S A+
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 95 DNLNGAQILGRTIRVDH 111
D + G ++ GR +R+D
Sbjct: 371 DAMTGQELAGRPLRLDF 387
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Apis florea]
Length = 293
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 9 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 69 NDSELFGRTIRVN-IAKPQKIKE 90
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F G++VDV + D + K RGFAF+ +E+ A+DN+
Sbjct: 11 IYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENAEDAAAAIDNM 70
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ A + KE
Sbjct: 71 NDSELFGRTIRVNIAAPQRIKE 92
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E L+ VF G+++ L D+ TGKP+G+ F + D + + AV
Sbjct: 4 SKVVFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHETAMSAV 63
Query: 95 DNLNGAQILGRTIRVD 110
NLNG + GR +R+D
Sbjct: 64 RNLNGVDVGGRPLRID 79
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P++ TE +L A F GE+ V LV D T +PRGF FV DQ + AV+NL
Sbjct: 5 LYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHETDRPRGFGFVEMGDQ-GALEAVENL 63
Query: 98 NGAQILGRTIRVD 110
NG+ + GR+I+V+
Sbjct: 64 NGSSLGGRSIKVN 76
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
++G IP+ L+E ++ +F++ G+++ LV D+ TGKP+GF F Y D AV NL+
Sbjct: 12 FIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAVRNLD 71
Query: 99 GAQILGRTIRVDH 111
+I+GR +RVD
Sbjct: 72 NFEIMGRKLRVDF 84
>gi|157412351|ref|YP_001483217.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9215]
gi|157386926|gb|ABV49631.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9215]
Length = 214
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF D++ +FA GE+V+ +L ++ TG+ RGFAF+ D+ A+D L
Sbjct: 3 IFVGNLPFRAEREDVIQLFAPFGEVVNCSLPLERDTGRKRGFAFIEMGDEAIEATAIDGL 62
Query: 98 NGAQILGRTIRVD 110
G +++GR +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG PF TE +L F+ G+I +V +V D+ TG+PRGFAF+ + ++ S AV+ +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 98 NGAQILGRTIRVD 110
NGA+ GR +RV+
Sbjct: 67 NGAEFNGRPLRVN 79
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G + FD TE DL AVFA+ G + V + D+ TG+ RGFAFV + A+D L
Sbjct: 13 IYIGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDEL 72
Query: 98 NGAQILGRTIRVD 110
GA+ +GRT++V+
Sbjct: 73 EGAEWMGRTLKVN 85
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 70 NDHEIMGRKLRVDF 83
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 70 NDHEIMGRKLRVDF 83
>gi|221115228|ref|XP_002154334.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Hydra
magnipapillata]
Length = 297
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+GG+ ++ E L A F G+I+DVN+ D T K RGFAF+ +E A+DN+
Sbjct: 7 IYIGGLAEEVEEKILHAAFIPFGDIIDVNIPIDYETSKHRGFAFMEFELAEDAAAAIDNM 66
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K E
Sbjct: 67 NESELYGRTIRVNLAKPMKNPE 88
>gi|198436643|ref|XP_002128347.1| PREDICTED: similar to homology with RNA-binding proteins in
meristematic tissue [Ciona intestinalis]
Length = 202
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG I F TE D+ F+ GEI + L++DK T K RGF F+ ++D+ S LA+ ++
Sbjct: 11 IFVGSIDFKATEKDVEEAFSHIGEIEHIVLLKDKETQKSRGFGFITFKDKNSVELAISSM 70
Query: 98 NGAQILGRTIRVDHVAK 114
N I+GR I V++ K
Sbjct: 71 NHKIIMGRPIVVNYAEK 87
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +++GG+ D +E DL F G+I V ++RD+ T RGFAF+++E Q S A+
Sbjct: 8 ARIFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIR 67
Query: 96 NLNGAQILGRTIRV 109
++G +I+GR + V
Sbjct: 68 RMHGVEIMGRCVTV 81
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D T+ D+ AVFA+ G + V+L D+ TG+PRGFAFV + A++ L
Sbjct: 3 IYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRDLRVN 75
>gi|291222246|ref|XP_002731128.1| PREDICTED: peptidylprolyl isomerase E-like [Saccoglossus
kowalevskii]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G++VD+ + D T K RGF+FV +E+ A+DN+
Sbjct: 8 VYVGGLAEEVDEKVLHAAFIPFGDLVDIQIPLDYETEKHRGFSFVEFENPEDAAAAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 68 NDSELFGRTIRVNLAKPMKIKE 89
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D++ +FAQ GE+ + L ++ TG+ RGFAF+ D+ + A++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+D +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ F+ E L F + G I V+++RDK TG+ RGF FV YE A
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 63 MTAMNGKSLDGRAIRVDEAGK 83
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ +E L VF Q G ++ LV D+ TGKP+G+ F Y+D + A+ NL
Sbjct: 26 VFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMRNL 85
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N GR +RV A + K+E
Sbjct: 86 NNYDYNGRPLRVGVAAGEQSKDE 108
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P+ TE ++ F+ G + +V +V D+ TG+PRGFAFV Y ++ AV+ L
Sbjct: 74 VYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQRAVEEL 133
Query: 98 NGAQILGRTIRVDHVAK 114
NGA GR +RV++ K
Sbjct: 134 NGAAFNGRNLRVNYANK 150
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ T +L A F++ G + DV ++ DK T + RGFAFV AV
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 169
Query: 98 NGAQILGRTIRVDH 111
NGA + GRT+RV+
Sbjct: 170 NGALLGGRTVRVNF 183
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
S H + +D+ + V + F T DL +F + GE+VD+++ RD+ TG+ RGFAFV Y
Sbjct: 7 SGHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNY 66
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE 132
+ A+D L+G + GR + V AKY E+ R R+ EE
Sbjct: 67 EDEAQDAIDGLDGMRFGGRALMV-QFAKYGPNAEKIH--RGRITEE 109
>gi|156377813|ref|XP_001630840.1| predicted protein [Nematostella vectensis]
gi|156217869|gb|EDO38777.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
YVGG+ ++ E L A F G+I DV + D T K RGF FV +E T A+DN+N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 99 GAQILGRTIRVDHVAKYKKKE 119
+++ GRTIRV+ K KE
Sbjct: 68 ESELFGRTIRVNLAKPMKIKE 88
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 9 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEMAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 69 NDSELFGRTIRVN-IAKPQKIKE 90
>gi|405968843|gb|EKC33872.1| Peptidyl-prolyl cis-trans isomerase E [Crassostrea gigas]
Length = 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G+I+D+ + D T K RGFAFV +E A+DN+
Sbjct: 9 VYVGGLAEEVDEKTLHAAFIPFGDILDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRT+RV+ K KE
Sbjct: 69 NDSEMFGRTLRVNMAKPMKLKE 90
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LTE D+ VF GE+ V+L +D TG+ +G+AFV Y+ +A++
Sbjct: 355 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALE 414
Query: 96 NLNGAQILGRTIRVDHV 112
+ G ++ GRT+RV+ V
Sbjct: 415 QMEGFELAGRTLRVNTV 431
>gi|195998405|ref|XP_002109071.1| hypothetical protein TRIADDRAFT_35408 [Trichoplax adhaerens]
gi|190589847|gb|EDV29869.1| hypothetical protein TRIADDRAFT_35408, partial [Trichoplax
adhaerens]
Length = 216
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 48/72 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF +T D+ +F + G+IV V ++++K T + +G AF+ + ++ S + AV+ L
Sbjct: 12 VYVSNLPFSMTNNDIHKLFCKHGKIVKVTIMKNKETRESKGVAFILFLERPSALAAVEAL 71
Query: 98 NGAQILGRTIRV 109
N +++GRTI+
Sbjct: 72 NNTEVIGRTIKC 83
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +P+ E D+ F Q G +V+V +V D+ TG+PRGF F +E + + AV ++
Sbjct: 5 IFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAVGSM 64
Query: 98 NGAQILGRTIRVD 110
N A +GR IRVD
Sbjct: 65 NNADFMGRQIRVD 77
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEIVDV + D + K RGFAF+ +E A+DN+
Sbjct: 47 IYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAIDNM 106
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ +AK +K +E
Sbjct: 107 NDSELFGRTIRVN-IAKPQKIKE 128
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T DL + F++ G + V L DK TG+PRGF FV + A+D L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDAL 62
Query: 98 NGAQILGRTIRVD 110
NGA+ +GR ++V+
Sbjct: 63 NGAEWMGRQLKVN 75
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G + + +TE DL FA+ G++ V L D+ TG+PRGFAFV E + A++ L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|168067714|ref|XP_001785753.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662601|gb|EDQ49434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 79
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D+ VYVGG+ ++ TE + F GE++ V +V DK +G+ RGF FV + +QRS +A
Sbjct: 3 DANSVYVGGLSYESTEDTVRKHFMTFGEVLSVKIVHDKMSGESRGFGFVTFANQRSASMA 62
Query: 94 VDNLNGAQILGRTIRVD 110
+ + +G QI GR IRV+
Sbjct: 63 ISDGDGVQIEGRCIRVN 79
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ T +L A F++ G + DV ++ DK T + RGFAFV AV
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 169
Query: 98 NGAQILGRTIRVDH 111
NGA + GRT+RV+
Sbjct: 170 NGALLGGRTVRVNF 183
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ +D TE L F++ G I V+++RD+ T + RGF FV +E+ A
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG Q+ GR IRVD K
Sbjct: 63 MAAMNGKQVDGRMIRVDEAGK 83
>gi|392902210|ref|NP_001255925.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
gi|5832813|emb|CAB55151.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG D+TE L+A F G++V +++ D +GK RGF FV ++ +A+DN+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ G+TIRV+ K E
Sbjct: 73 NESELFGKTIRVNFARPPKATE 94
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + +D T+ DL FA+ G + V + D+ TG+PRGFAFV E + A++ L
Sbjct: 3 VYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEGL 62
Query: 98 NGAQILGRTIRVD 110
+G++++GR ++V+
Sbjct: 63 DGSELMGRILKVN 75
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG IP+++T+ DL ++FA+ G + V L D+ TG+ RGF FV ++ A++ L
Sbjct: 3 IYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRELRVN 75
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp. CB0205]
Length = 157
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D+ +FA GE+ + +L ++ TG+ RGFAFV D S A+D L
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAIDAL 62
Query: 98 NGAQILGRTIRVDHV 112
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRINKA 77
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp. CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
CC9605]
Length = 173
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D++ +FAQ GE+ + L ++ TG+ RGFAF+ D+ + A++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P+ ++E ++ F+ G + +V +V D+ TG+PRGFAFV + D+ AV+ L
Sbjct: 8 VYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQL 67
Query: 98 NGAQILGRTIRVDHVAK 114
NGA GR +RV++ K
Sbjct: 68 NGASFNGRNLRVNYANK 84
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+
Sbjct: 12 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 71
Query: 90 TILAVDNLNGAQILGRTIRVDHVAK 114
A+ +NG + GR IRVD K
Sbjct: 72 AKDAMMAMNGKSVDGRQIRVDQAGK 96
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D+ +FAQ GE+V+ L ++ TG+ RGFAFV D + A++ L
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 62
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++ E L A F G+IVD+ + D + K RGFAF+ +E AVDN+
Sbjct: 9 VYVGGLAEEICEEVLKAAFIPFGDIVDIQIPLDYESEKHRGFAFIEFETSEDAGAAVDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N A++ GRTIRV+ K KE
Sbjct: 69 NDAELFGRTIRVNLAKPQKIKE 90
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T DL AVFA G + V L D+ TG+PRGF FV E A++ L
Sbjct: 3 IYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRNMKVN 75
>gi|440792320|gb|ELR13547.1| cleavage stimulation factor 64kDa subunit, partial [Acanthamoeba
castellanii str. Neff]
Length = 84
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L +F+ G + LV D+ TGKP+GF F Y D + + A+ NL
Sbjct: 14 VFVGNIPYDATEEQLTEIFSSVGPVTCFRLVFDRETGKPKGFGFCEYRDTETAMSAMRNL 73
Query: 98 NGAQILGRTIR 108
NG I GR +R
Sbjct: 74 NGYDINGRALR 84
>gi|336465131|gb|EGO53371.1| hypothetical protein NEUTE1DRAFT_52411 [Neurospora tetrasperma FGSC
2508]
Length = 597
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA +++G IP++ T+ +L +F + DV + D+ TG PRGFA + D + + A+
Sbjct: 439 SACLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNAL 498
Query: 95 DNLNGAQILGRTIRVDH---VAKYKKKEEEDEETRQRMREER 133
+ L G Q+ RTI++D+ VA + +E E R R++R
Sbjct: 499 EKLQGTQLGERTIKIDYAQPVAARQPRENNGERREYRPRQQR 540
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
+V I FD TE L F + G + DV L RD G +G+ FV + + + A ++
Sbjct: 353 FVRNIVFDATEEHLKGAFEKFGNVTDVFLARDP-RGLSKGYGFVTFATREALEEACSQVD 411
Query: 99 GAQILGRTIRVD 110
G+ GR I V+
Sbjct: 412 GSFWHGRRISVE 423
>gi|77917576|ref|NP_001030112.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Rattus norvegicus]
gi|116256279|sp|Q499V6.1|ZCRB1_RAT RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|71121799|gb|AAH99747.1| Zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
gi|149017620|gb|EDL76624.1| zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ S + +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 98 NGAQILGRTIR 108
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L + F G+I DVN+ D TGK RGF FV YE+ + A+DN+
Sbjct: 19 LYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDNTTGKHRGFGFVEYENAEDSADAIDNM 78
Query: 98 NGAQILGRTIRVDHVAKYKKK 118
+ A++ GR +R ++ K K
Sbjct: 79 HNAELYGRVLRCNYAQPMKIK 99
>gi|145545937|ref|XP_001458652.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426473|emb|CAK91255.1| unnamed protein product [Paramecium tetraurelia]
Length = 143
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+GGIP D+T + +F GEI V+L D T K RGFAF+ YED A+DN
Sbjct: 9 VYLGGIPEDVTVEQIKHLFITFGEIKSVDLPIDSETLKNRGFAFIEYEDIEDAEAAIDNY 68
Query: 98 NGAQILGRTIRVDHVAKYKKK 118
+ ++ G+ ++V YK K
Sbjct: 69 DEGELFGKIVKVKPAKPYKPK 89
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + LTE +L VF++ GE+ N++ DK +GK RGF FV ++ A++ L
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 98 NGAQILGRTIRVD 110
NG+Q+ GR+++V+
Sbjct: 63 NGSQLDGRSLKVN 75
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + TE D+ +F+Q G + +V+L D+ TG+PRGFAFVA + + + A+ L
Sbjct: 5 MYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIKGL 64
Query: 98 NGAQILGRTIRVDH 111
NG + +GR + V+
Sbjct: 65 NGLEWMGRALTVNE 78
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG I +D+T DL VF G + V+L D+ TGKPRGF FV ++ A++ L
Sbjct: 3 IYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEEL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ LGR +RV+
Sbjct: 63 DGAEWLGRQMRVN 75
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP++ TE + +F + G ++ LV D+ TGKP+G+ F Y+D + + A+ NL
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMRNL 86
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEET 125
N ++ GR +RVDH + E+E +
Sbjct: 87 NTRELHGRNLRVDHATRDHGVEKEQPQA 114
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 98 ---NGAQI-LGRTIRVDHV 112
NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K + ++VGG+P LTE D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFK-TKKIFVGGLPQALTEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAYEDQRST--ILAVDN---LNGAQIL 103
+RD T + RGF F+ + + +LA N L GA+++
Sbjct: 143 MRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKLI 183
>gi|57106414|ref|XP_534835.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Canis lupus familiaris]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ S + +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 98 NGAQILGRTIR 108
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|145551907|ref|XP_001461630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429465|emb|CAK94257.1| unnamed protein product [Paramecium tetraurelia]
Length = 144
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+GGIP D+T + +F GEI V+L D T K RGFAF+ YED A+DN
Sbjct: 9 VYLGGIPEDVTVEQIKHLFITFGEIKSVDLPIDSETLKNRGFAFIEYEDIEDAEAAIDNY 68
Query: 98 NGAQILGRTIRVDHVAKYKKK 118
+ ++ G+ ++V YK K
Sbjct: 69 DEGELFGKIVKVKPAKPYKPK 89
>gi|159487815|ref|XP_001701918.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281137|gb|EDP06893.1| predicted protein [Chlamydomonas reinhardtii]
Length = 77
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 51/73 (69%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ F T+ D+ VF++ G+++++ LV D T + +G+AFV++ D+ + + A+ +
Sbjct: 1 IYVGGLNFSATKDDIYDVFSEAGKVINIQLVVDHETQRSKGYAFVSFADEDAYLYALRKM 60
Query: 98 NGAQILGRTIRVD 110
NG Q+ GR++ V+
Sbjct: 61 NGVQVKGRSVVVN 73
>gi|409047225|gb|EKM56704.1| hypothetical protein PHACADRAFT_93372, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 302
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
VG +P+++ E L+ F G++V LV D+ TGKP+G+ F + D + + AV NLNG
Sbjct: 1 VGNVPYNMAEEQLIDAFKSVGQVVGFRLVYDRDTGKPKGYGFCEFADHETALSAVRNLNG 60
Query: 100 AQILGRTIRVD 110
+I GR +R+D
Sbjct: 61 QEIGGRPLRID 71
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 70 NDFEIMGRKLRVDF 83
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA ++VG I FD T+ + VF + G I V L D+ TG P+GF +V + A+
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 95 DNLNGAQILGRTIRVDH 111
+NL G I GR IR+D+
Sbjct: 420 ENLTGVDIAGRPIRLDY 436
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D+ +FAQ GE+V+ L ++ TG+ RGFAFV D + A++ L
Sbjct: 33 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 92
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 93 QGAELMGRPLRIN 105
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+
Sbjct: 27 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 86
Query: 90 TILAVDNLNGAQILGRTIRVDHVAK 114
A+ +NG + GR IRVD K
Sbjct: 87 AKDAMMAMNGKSVDGRQIRVDQAGK 111
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ FD TE L F++ G I +V++ R++ T + RGF FV +E+ A
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
++ +NG + GRTIRVD K
Sbjct: 63 LEGMNGKSVDGRTIRVDEAGK 83
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ +++G + FD++E D+ F++ GE+ V L +D +G+P+GF +V + Q S A+
Sbjct: 305 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAL 364
Query: 95 DNLNGAQILGRTIRVDH 111
D + G ++ GR +R+D
Sbjct: 365 DAMTGQELAGRPLRLDF 381
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ + E L A F GEI +VN+ D TG RGF FV YE++ A+DN+
Sbjct: 20 LYVGGLEETVNEATLHAAFLPFGEIKEVNIPLDHATGTHRGFGFVEYEEKEDAAAAIDNM 79
Query: 98 NGAQILGRTIRVDHVAKYKKK 118
+ A++ GR ++V++ K K
Sbjct: 80 HNAELFGRVLKVNYAQPMKIK 100
>gi|159462614|ref|XP_001689537.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283525|gb|EDP09275.1| predicted protein [Chlamydomonas reinhardtii]
Length = 73
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 45/71 (63%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
VG IP+D+TE L +F+Q G I + +V DK TGKP+G+ F Y D + AV NLN
Sbjct: 1 VGNIPYDVTEQMLQDMFSQVGAIKSLRMVTDKDTGKPKGYGFCEYHDVGTAQSAVRNLNK 60
Query: 100 AQILGRTIRVD 110
++ GR +RVD
Sbjct: 61 YEVNGRMLRVD 71
>gi|346324388|gb|EGX93985.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 284
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDSETGRPKGFGFAEYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEET 125
N +I+GR +RVD +++K +D+ T
Sbjct: 70 NDYEIMGRKLRVDF--SHEQKASDDDYT 95
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VGG+P+ + E DL F++ GE+VD +V ++ TG+ RGF FV+Y + S + L
Sbjct: 9 VFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECIAAL 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
+G + GRTIRV+ +++E
Sbjct: 69 DGQDMQGRTIRVNKAMSREQRE 90
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 268 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 327
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ S LA+ LN ++++GR +RV
Sbjct: 328 VLFENTDSVHLAL-KLNNSELMGRKLRV 354
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 268 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 327
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ S LA+ LN ++++GR +RV
Sbjct: 328 VLFENTDSVHLAL-KLNNSELMGRKLRV 354
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ DL VFA+ G + V L D+ TG+PRGF FV + A+D L
Sbjct: 3 IYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+ A+ +GR I+V+ K K +EE
Sbjct: 63 DSAEWMGRDIKVN---KAKPREE 82
>gi|21313088|ref|NP_080301.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Mus musculus]
gi|81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=MADP-1;
AltName: Full=U11/U12 small nuclear ribonucleoprotein 31
kDa protein; Short=U11/U12 snRNP 31 kDa protein
gi|12849869|dbj|BAB28513.1| unnamed protein product [Mus musculus]
gi|25005468|dbj|BAC23140.1| MADP-1 protein [Mus musculus]
gi|34849714|gb|AAH58368.1| Zcrb1 protein [Mus musculus]
Length = 217
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ S + +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 98 NGAQILGRTIR 108
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ S LA+ LN ++++GR +RV
Sbjct: 333 VLFENTDSVHLAL-KLNNSELMGRKLRV 359
>gi|218246364|ref|YP_002371735.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257059410|ref|YP_003137298.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166842|gb|ACK65579.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589576|gb|ACV00463.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 92
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL +VFA+ G + V++ D+ TG+PRGFAFV A+D L
Sbjct: 3 IYVGNLSYEVTEADLNSVFAEYGSVKRVHVPTDRDTGRPRGFAFVEMGTDAQEATAIDTL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR + V+
Sbjct: 63 DGAEWMGRALTVN 75
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + TE L ++FAQ G+++ ++ D+ T +P+GFAFV +D + + A+ L
Sbjct: 5 IYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAISQL 64
Query: 98 NGAQILGRTIRVDH-VAK 114
+G ++ GR +RV+ +AK
Sbjct: 65 DGRELDGRNLRVNEAIAK 82
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +YVGG+P++ TE + VF G IV V ++ ++G G + + FV + + RS I A
Sbjct: 5 DDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRSAIDA 63
Query: 94 VDNLNGAQILGRTIRVDHV 112
++++NG I GR + V+ V
Sbjct: 64 INDMNGRDIDGRIVVVNEV 82
>gi|74206672|dbj|BAE41588.1| unnamed protein product [Mus musculus]
gi|148672337|gb|EDL04284.1| mCG19744, isoform CRA_c [Mus musculus]
Length = 216
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ S + +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 98 NGAQILGRTIR 108
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ DL VFA+ G + V L D+ TG+PRGF FV + A++ L
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR I+V+
Sbjct: 63 DGAEWMGRDIKVN 75
>gi|403371443|gb|EJY85602.1| Nuclear cap-binding protein subunit 2 [Oxytricha trifallax]
Length = 248
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 21 GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFA 80
G+S D + K +S +YVG + F +E LL F CGE+V++ + ++ +P GF
Sbjct: 24 GLSQD-QYKEKLSNSTTLYVGNLSFYTSETQLLEFFQLCGEVVNLIMGLNREKKQPCGFC 82
Query: 81 FVAYEDQRSTILAVDNLNGAQILGRTIRVD 110
FV Y ++ LA++ LN + + GR IR+D
Sbjct: 83 FVEYATRQEAALAIECLNLSVVDGRQIRID 112
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+ V +P++ + DL +F + GE+ DV + RD TG+PRGFAFV + DQR A+D +
Sbjct: 29 LKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRM 88
Query: 98 NGAQILGRTIRVDHVAK 114
+G GR +R+ + K
Sbjct: 89 DGEFFAGRELRIQYAKK 105
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG RGF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEEHFLDCGHIVAVRIVRDQVTGVGRGFGY 332
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRA 138
V +E+ + LA+ LN ++++GR +RV V K K K+ + + + ++G+ A
Sbjct: 333 VLFENTDAVHLAL-KLNNSELMGRKLRVMRSVNKEKLKQNSNPSLKNATKPKQGLNSA 389
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF + G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 5 DEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDA 64
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
++ +NG + GR IRVD K
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGK 85
>gi|58803060|gb|AAW82658.1| cyclophilin [Haemonchus contortus]
Length = 324
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG ++TE L+A F G+IV +++ D TGK RGF FV +E A+DN+
Sbjct: 14 LYVGGFGEEVTEKVLMAAFITFGDIVAISIPMDYETGKHRGFGFVEFELAEDAAAAIDNM 73
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIR + K E
Sbjct: 74 NESELFGRTIRCNFARPPKATE 95
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P+ TE D+ F+ G + +V +V D+ TG+PRGFAFV Y D+ AV L
Sbjct: 8 VYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQEL 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG GR +RV+ K
Sbjct: 68 NGTSFNGRNLRVNFANK 84
>gi|406859758|gb|EKD12821.1| nuclear cap-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 153
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKP---RG 78
+SD A W A VYVGG+ + +L A F GEI DV+L + G RG
Sbjct: 1 MSDQARWKAT------VYVGGLAPMVNAANLHAAFLPFGEIADVSLPKPAGPNSTELHRG 54
Query: 79 FAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERG 134
F +V +ED T A+DN+ GA++ G+ I+V AK K E ++ + E+ G
Sbjct: 55 FGYVEFEDSEDTKDAIDNMEGAELFGKPIKV-SAAKPPKNVNEGLGSKTALWEQEG 109
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + +D T+ D+ VFA+ G + +L D+ TG+PRGFAFV E A++ L
Sbjct: 3 VYVGNLSYDATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVEMETDAEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRVLKVN 75
>gi|350295431|gb|EGZ76408.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 601
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA +++G IP++ T+ +L ++F + DV + D+ TG PRGFA + D + + A+
Sbjct: 439 SACLFIGNIPYETTDAELNSIFVGVDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNAL 498
Query: 95 DNLNGAQILGRTIRVDH---VAKYKKKEEEDEETRQRMREER 133
+ L G Q+ RTI++D+ A + +E E R R++R
Sbjct: 499 EKLQGTQLGERTIKIDYAQPAAARQPRENNGERREYRPRQQR 540
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
+V I FD TE L F + G + DV L RD G +G+ FV + + + A ++
Sbjct: 353 FVRNIVFDATEEHLKGAFEKFGNVTDVFLARDP-RGLSKGYGFVTFATREALEEACSQVD 411
Query: 99 GAQILGRTIRVD 110
G+ GR I V+
Sbjct: 412 GSFWHGRRISVE 423
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF G++ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 137 LYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPEDAKMALEQM 196
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
+G ++ GRT+RV+ V A+Y +++ +E
Sbjct: 197 DGFELAGRTLRVNTVHEKGTARYTQQDSLEE 227
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + + +TE DL +VFA+ G + V++ D+ TG+PRGFAFV + A++ L
Sbjct: 3 VYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIEKL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|68066518|ref|XP_675235.1| mRNA processing protein [Plasmodium berghei strain ANKA]
gi|56494302|emb|CAH94523.1| mRNA processing protein, putative [Plasmodium berghei]
Length = 153
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
K++ +++G IPFDL+E +L + ++ GE+V+V + D +GFAF Y+D + +L
Sbjct: 4 KNNCSLWIGNIPFDLSEKELQEILSKVGEVVNVRIKYDIDKNVSKGFAFCEYKDLETCML 63
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGV 135
A+ LNG +I GR +++ Y +E E+ + G+
Sbjct: 64 ALKYLNGYEIRGRKLKL-----YWATDESKEKANNSIFLSNGI 101
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T DL VF + GE+ V+L D+ TG+PRGFAFV + + A++ L
Sbjct: 3 IYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRDMRVN 75
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +V +E+ S L
Sbjct: 1354 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHL 1413
Query: 93 AVDNLNGAQILGRTIRV 109
A+ LN ++++GR +RV
Sbjct: 1414 AL-KLNNSELMGRKLRV 1429
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 98 ---NGAQI-LGRTIRVDHV 112
NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K ++VGG+P LTE D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFKTKK-IFVGGLPQALTEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAYEDQRST--ILAVDN---LNGAQI 102
+RD T + RGF F+ + + +LA N L GA++
Sbjct: 143 MRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKV 182
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F LT+ ++ AVF GEI V+L R+ GTGK +GF F+ ++ A++
Sbjct: 427 ARLYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALE 486
Query: 96 NLNGAQILGRTIRVDHV 112
+NG ++ GR IRV +V
Sbjct: 487 QMNGFELAGRAIRVGNV 503
>gi|16332012|ref|NP_442740.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|383323755|ref|YP_005384609.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326924|ref|YP_005387778.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492808|ref|YP_005410485.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438076|ref|YP_005652801.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451816164|ref|YP_007452616.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|15214210|sp|Q57014.3|RBPA_SYNY3 RecName: Full=Putative RNA-binding protein RbpA
gi|1001324|dbj|BAA10811.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|1161274|gb|AAA85379.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|339275109|dbj|BAK51596.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|359273075|dbj|BAL30594.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276245|dbj|BAL33763.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279415|dbj|BAL36932.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960353|dbj|BAM53593.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451782133|gb|AGF53102.1| RNA binding protein [Synechocystis sp. PCC 6803]
Length = 101
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D++E DL AVFA+ G + V L D+ TG+ RGF FV E A++ L
Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLACETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSILAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
V +E+ S LA+ LN ++++GR +RV +K ++++ R +
Sbjct: 333 VLFENTDSVHLAL-KLNNSELMGRKLRVMRSVNKEKLKQQNSNPRLK 378
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
+VGG+ + + +L F+Q GE++D ++ D+ TG+ RGF FV ++D++S A+D +N
Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68
Query: 99 GAQILGRTIRVDH 111
G ++ GRTI V+
Sbjct: 69 GKELDGRTITVNE 81
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG +PFD+ E F CG + V LVRDK +G +GF +V +E S LA++ L
Sbjct: 266 VFVGNLPFDIHEQAFRKHFETCGTVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALE-L 324
Query: 98 NGAQILGRTIRVDHVAKYKKKEEE 121
N +++ GR+IRV K +K++ +
Sbjct: 325 NASKLEGRSIRVKRSVKKEKQKNQ 348
>gi|351697169|gb|EHB00088.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 180
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP + +E L +F++ G +V V D+ TGKP+G+ F Y+DQ + + A+ +L
Sbjct: 18 VFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYGFCEYQDQETALSAMQHL 77
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
NG + GR +RVD A K KE
Sbjct: 78 NGHEFSGRALRVDSAASEKNKE 99
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S +++G + FD T + +FA+ G I V+L D+ TG +GF +V + Q A+
Sbjct: 336 SNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAAL 395
Query: 95 DNLNGAQILGRTIRVDHVA 113
D LNG I GR IR+D+ A
Sbjct: 396 DALNGQDIAGRNIRIDYAA 414
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF TE ++ +FAQ GE+ V L+ D+ TG+PRGF FV ED + A++ L
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEMEDGGAD-KAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
+G GR++RV+ + K ++
Sbjct: 63 DGTTFGGRSLRVNEARERKPRQ 84
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEET 125
N +I+GR +RVD + K +++ + T
Sbjct: 70 NEYEIMGRKLRVDFSNEQKSTDDDGQNT 97
>gi|298248970|ref|ZP_06972774.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546974|gb|EFH80841.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 104
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+P+ TE DL+ +F Q G++ ++ D+ TG+ +GF FV T A++ L
Sbjct: 3 IYVGGLPYQSTEQDLIQLFEQIGQVTSATVITDRETGRSKGFGFVEMSSDDETRAAIEQL 62
Query: 98 NGAQILGRTIRVD 110
NG+ + RTI V+
Sbjct: 63 NGSTLGDRTITVN 75
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D++ +FA GE+ + +L ++ TG+ RGFAF+ D+ + A++ L
Sbjct: 3 IFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEAL 62
Query: 98 NGAQILGRTIRVDHV 112
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRINKA 77
>gi|72062514|ref|XP_796219.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Strongylocentrotus purpuratus]
Length = 233
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F + G++ V +V+DK T K +G AFV + ++ S ++ +L
Sbjct: 12 VYVSNLPFTLTNNDLQQIFGRFGQVARVTIVKDKETRKSKGLAFVLFVERDSAYKSIKSL 71
Query: 98 NGAQILGRTIRV 109
NG ++ GR +V
Sbjct: 72 NGRELFGRKWKV 83
>gi|359463045|ref|ZP_09251608.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 90
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+TE DL VFA+ G + L D+ TG+ RGF FV D A+D L
Sbjct: 3 IYVGNLSYDVTEKDLSTVFAEYGTVKSAKLPTDRETGRIRGFGFVEMGDDTEEAKAIDEL 62
Query: 98 NGAQILGRTIRVD 110
GA+ +GRT++V+
Sbjct: 63 EGAEWMGRTLKVN 75
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + TE DL AVFA GE+ V L D+ TG+ RGFAFV E+ A+ L
Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMEEDAQENAAITEL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRQLRVN 75
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + E +L VF + GE+ V ++ D+ TG+ +GF F+ D + A+ +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 98 NGAQILGRTIRVDH 111
NGA++ GRTI V+
Sbjct: 63 NGAELYGRTIVVNQ 76
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG P+ TE ++ F+ G + +V +V D+ TG+PRGFAFV + +Q+S AV+ L
Sbjct: 8 IYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNEL 67
Query: 98 NGAQILGRTIRVD 110
NGA GR +RV+
Sbjct: 68 NGADFNGRQLRVN 80
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVD 95
A +YVG + F+LTE D+ VF GE+ V+L +D TG+ +G+AF+ Y+ +A++
Sbjct: 238 ATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMALE 297
Query: 96 NLNGAQILGRTIRVDHV 112
+ G ++ GRT+RV+ V
Sbjct: 298 QMEGFELAGRTLRVNTV 314
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y+ +A++ +
Sbjct: 120 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQM 179
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V +Y +++ DE
Sbjct: 180 EGFELAGRTLRVNTVHEKGSTRYTQQDTLDE 210
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
V +E+ S LA+ LN ++++GR +RV +K ++++ R +
Sbjct: 333 VLFENTDSVHLAL-KLNNSELMGRKLRVMRSVNKEKLKQQNSNPRLK 378
>gi|308482576|ref|XP_003103491.1| CRE-CYN-13 protein [Caenorhabditis remanei]
gi|308259912|gb|EFP03865.1| CRE-CYN-13 protein [Caenorhabditis remanei]
Length = 337
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG ++TE L+A F G++V +++ D +GK RGF FV ++ +A+DN+
Sbjct: 13 LYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ G+TIRV+ K E
Sbjct: 73 NESELFGKTIRVNFARPPKATE 94
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGGI F+ E L VFA+ G++ +V ++R++ T + +GF FV +E+ A
Sbjct: 3 DEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDA 62
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVDH K
Sbjct: 63 LAGMNGKTVDGRQIRVDHAGK 83
>gi|50286493|ref|XP_445675.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524980|emb|CAG58586.1| unnamed protein product [Candida glabrata]
Length = 280
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+G IP+D TE +L + + G +V + ++ D TGK +G+AFV Y+D S+ AV NL
Sbjct: 18 VYLGSIPYDQTEEQILDLCSNVGPVVSLKMMFDSQTGKSKGYAFVQYQDLESSASAVRNL 77
Query: 98 NGAQILGRTIRVDH 111
NG Q+ R ++ +
Sbjct: 78 NGYQLGSRLLKCGY 91
>gi|392884214|gb|AFM90939.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F G+I+D+ + D T K RGFAFV +E+ A+DN+
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ + KE
Sbjct: 68 NESELFGRTIRVNLAKPMRIKE 89
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+TE D+ VFA+ G + +V L +D+ TG+ RGFAFV A++ L
Sbjct: 3 IYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRNLKVN 75
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG + +D+++ DL+ VF + G + V++ DK TG+ RGFAFV E++ A++ L
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR+I+V+
Sbjct: 63 DGAEWMGRSIKVN 75
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 98 NGAQILGRTIRVD 110
+I GR +RVD
Sbjct: 71 QSYEINGRQLRVD 83
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 98 NGAQILGRTIRVD 110
+I GR +RVD
Sbjct: 71 QSYEINGRQLRVD 83
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +I+GR +RVD
Sbjct: 70 NEYEIMGRKLRVDF 83
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|225713872|gb|ACO12782.1| Peptidyl-prolyl cis-trans isomerase E [Lepeophtheirus salmonis]
Length = 311
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F GEI +V + D T K RGFAF+ YE+ R A+DN+
Sbjct: 10 LYVGGLAEEVEEKVLKAAFIPFGEITEVQIPIDYQTEKHRGFAFIEYEEPRDATAAIDNM 69
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
+ +++ GRT+RV+ + KE
Sbjct: 70 HDSELFGRTLRVNLAKPLRLKE 91
>gi|449488973|ref|XP_004186222.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E [Taeniopygia guttata]
Length = 271
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDN 96
+YVGG+ ++ E L A F G+I D+ + D T K RGFAFV +E A+DN
Sbjct: 7 VLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 66
Query: 97 LNGAQILGRTIRVDHVAKYKKKE 119
+N +++ GRTIRV+ + KE
Sbjct: 67 MNESELFGRTIRVNLAKPMRIKE 89
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|387915672|gb|AFK11445.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F G+I+D+ + D T K RGFAFV +E+ A+DN+
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ + KE
Sbjct: 68 NESELFGRTIRVNLAKPMRIKE 89
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 1658 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 1717
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ S LA+ LN ++++GR +RV
Sbjct: 1718 VLFENTDSVHLAL-KLNNSELMGRKLRV 1744
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ TE ++ A F GE+ V L+ D+ TG+PRGF FV +D + A++NL
Sbjct: 5 IYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDA-GALEAIENL 63
Query: 98 NGAQILGRTIRVDH 111
+G GR I+V+
Sbjct: 64 DGKDFGGRNIKVNE 77
>gi|33860573|ref|NP_892134.1| RNA recognition motif-containing protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633515|emb|CAE18472.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 221
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%)
Query: 28 WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ 87
++ K + ++VG +PF D+L +F GE+++ +L ++ TG+ RGFAFV D+
Sbjct: 14 YYFKVEFQVSIFVGNLPFRAEREDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADE 73
Query: 88 RSTILAVDNLNGAQILGRTIRVD 110
A+D L G +++GR +R++
Sbjct: 74 ALETSAIDGLQGTELMGRPLRIN 96
>gi|47222076|emb|CAG12102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYV +PF LT DL +F + G++V V +V+DK T + +G AFV + D+ S V +
Sbjct: 12 VYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNCVRAV 71
Query: 98 NGAQILGRTIR 108
N Q+ GRT++
Sbjct: 72 NNKQLFGRTVK 82
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHA-KYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
L + ++HIN D +S + + A + SA ++VGGI + + L FA+ GE+
Sbjct: 10 LVKNSAVKHINQ---DFSVSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEV 66
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAK 114
+DV ++ D+ TG+ RGF F+ + A+ ++G + GR IRV++ +
Sbjct: 67 IDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATE 118
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG P+ +E ++ + F+ G + +V +V D+ TG+PRGFAFV + D+ AV+ L
Sbjct: 8 VYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNEL 67
Query: 98 NGAQILGRTIRVDHVAK 114
NGA GR +RV+ ++
Sbjct: 68 NGADFNGRQLRVNLASR 84
>gi|401401970|ref|XP_003881139.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
gi|325115551|emb|CBZ51106.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
Length = 287
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 45/83 (54%)
Query: 28 WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ 87
W AK S VYVG + F TE +L VF+ G + V + ++ T P GFAFV Y
Sbjct: 26 WKAKVARSCVVYVGNLNFSTTEDELYEVFSHAGLVRRVVMGLNRQTRSPCGFAFVEYFRP 85
Query: 88 RSTILAVDNLNGAQILGRTIRVD 110
RS +A+ LNG GR IRVD
Sbjct: 86 RSAQVAIAVLNGCNCDGRVIRVD 108
>gi|261488364|emb|CBH19557.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
gi|261488394|emb|CBH19572.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 125
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 98 ---NGAQI-LGRTIRVDHV 112
NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
>gi|390341388|ref|XP_799104.3| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
YVGG+ ++TE L A F G+I+D+ + D T K RGFAFV +E ++DN+N
Sbjct: 11 YVGGLAEEVTEKTLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFEFAEDCAASIDNMN 70
Query: 99 GAQILGRTIRVDHVAKYKKKE 119
+++ GRTIRV+ K K+
Sbjct: 71 DSELFGRTIRVNLAKPMKIKD 91
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+D+ + V I F T DL +F +CG++VDV + RD+ TG RGFAFV Y+
Sbjct: 13 RDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKY 115
A+D L+G + GR I V AKY
Sbjct: 73 AIDRLDGRNVDGRNIMV-QFAKY 94
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
WH 8102]
Length = 214
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D++ +FAQ GE+ + L ++ TG+ RGFAFV D+ A++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDAAIEGL 62
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ + + A NL
Sbjct: 10 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 98 NGAQILGRTIRVD 110
+I GR +RVD
Sbjct: 70 QSYEINGRQLRVD 82
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|414588425|tpg|DAA38996.1| TPA: hypothetical protein ZEAMMB73_344937, partial [Zea mays]
Length = 163
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S + VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ + + A
Sbjct: 43 SISITVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSAR 102
Query: 95 DNLNGAQILGRTIRVDH 111
NL G +I GR +RVD
Sbjct: 103 RNLQGYEINGRQLRVDF 119
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG PF TE + F+ G++ +V +V D+ TG+PRGFAFV + D+ + AV L
Sbjct: 7 VYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQEL 66
Query: 98 NGAQILGRTIRVD 110
NGA GR +RV+
Sbjct: 67 NGADFNGRQLRVN 79
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG PF +E ++ F+ G + +V +V D+ TG+PRGFAFV + D+ AV L
Sbjct: 8 VYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQEL 67
Query: 98 NGAQILGRTIRVD 110
NGA+ GR +RV+
Sbjct: 68 NGAEFNGRQLRVN 80
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +YVGG+P++ TE + VF G IV V ++ ++G G + + FV + + RS I A
Sbjct: 5 DDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRSAIDA 63
Query: 94 VDNLNGAQILGRTIRVDHV 112
++++NG I GR + V+ V
Sbjct: 64 INDMNGRDIDGRIVVVNEV 82
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ DL+ F + G + V+L D+ TG+ RGFAFV E+ A++ L
Sbjct: 3 IYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDE 123
+GA+ +GR ++V+ K K ED+
Sbjct: 63 DGAEWMGRDLKVN-----KAKPREDK 83
>gi|126330203|ref|XP_001365208.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Monodelphis
domestica]
Length = 301
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F G+I D+ + D T K RGFAFV +E A+DN+
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 68 NESELFGRTIRVNLAKPMKIKE 89
>gi|395526569|ref|XP_003765433.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Sarcophilus
harrisii]
Length = 301
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ E L A F G+I D+ + D T K RGFAFV +E A+DN+
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ K KE
Sbjct: 68 NESELFGRTIRVNLAKPMKIKE 89
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T DL VF++ G + V+L D+ TG+PRGF FV E A++ L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GA +GR +RV+
Sbjct: 63 DGADWMGRQMRVN 75
>gi|427415488|ref|ZP_18905672.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425756163|gb|EKU97020.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D T DL AVFA+ G + V+L D+ TG+ RGFAFV + A++ L
Sbjct: 3 IYVGNLSYDATNEDLTAVFAEYGTVKSVHLPTDRETGRMRGFAFVEMGAESEETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T DL VF++ G + V+L D+ TG+PRGF FV E A++ L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GA +GR +RV+
Sbjct: 63 DGADWMGRQMRVN 75
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 302 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 361
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ S LA+ LN ++++GR +RV
Sbjct: 362 VLFENTDSVHLAL-KLNNSELMGRKLRV 388
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +YVGG+P++ TE + VF G IV V ++ ++G G + + FV + + RS I A
Sbjct: 57 DDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRSAIDA 115
Query: 94 VDNLNGAQILGRTIRVDHV 112
++++NG I GR + V+ V
Sbjct: 116 INDMNGRDIDGRIVVVNEV 134
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + GEI V+L D+ T + RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + GEI V+L D+ T + RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG +V V +VRD+ TG RGF +V +
Sbjct: 275 DLATETSSRDKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLF 334
Query: 85 EDQRSTILAVDNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRAFQRGE 143
E+ + LA+ LN ++++GR +RV V K K K+ + + + ++G+ A + +
Sbjct: 335 ENTDAVHLALK-LNNSELMGRKLRVMRSVHKEKLKQNSNPSLKNVSKPKQGLNFASKSAQ 393
Query: 144 CTRG 147
++G
Sbjct: 394 NSKG 397
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|85117951|ref|XP_965346.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
gi|28927154|gb|EAA36110.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
Length = 606
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA +++G IP++ T+ +L +F + DV + D+ TG PRGFA + D + + A+
Sbjct: 439 SACLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNAL 498
Query: 95 DNLNGAQILGRTIRVDH---VAKYKKKEEEDEETRQRMREER 133
+ L G Q+ RTI++D+ A + +E E R R++R
Sbjct: 499 EKLQGTQLGERTIKIDYAQPAAARQPRENNGERREYRPRQQR 540
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+V I FD TE L F + G + DV L RD G +G+ FV + + + A +
Sbjct: 352 AFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDP-RGLSKGYGFVTFATREALEEACSQV 410
Query: 98 NGAQILGRTIRVD 110
+G+ GR I V+
Sbjct: 411 DGSFWHGRRISVE 423
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T DL A FAQ G + V L D+ TG+ RGFAFV + A+D L
Sbjct: 3 IYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEED 122
+GA+ +GR ++V+ K K ED
Sbjct: 63 DGAEWMGRNMKVN-----KAKPRED 82
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+D+ + V I F T DL +F +CG++VDV + RD+ TG RGFAFV Y+
Sbjct: 13 RDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKY 115
A+D L+G + GR I V AKY
Sbjct: 73 AIDRLDGRNVDGRNIMV-QFAKY 94
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG + FD+T+ DL FA+ G + V L D+ TG+ RGF FV A+D L
Sbjct: 3 VYVGNLSFDVTQDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAIDAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y +
Sbjct: 13 RESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQD 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 138
A+D L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 73 AIDGLDGMRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 119
>gi|281207156|gb|EFA81339.1| hypothetical protein PPL_05322 [Polysphondylium pallidum PN500]
Length = 1665
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
VG IP+D TE +L+ +F++ G +V +V D+ T KP+G+ F Y DQ + A+ NLN
Sbjct: 8 VGNIPYDATEKELIDIFSEVGRVVSFRMVEDRDTKKPKGYGFCEYLDQETAQSAIRNLNN 67
Query: 100 AQILGRTIRVDHVAKYKKKE 119
++ R +RV + K E
Sbjct: 68 RELNKRNLRVSYADNEKANE 87
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T+ DL VF+ G + +++ D+ TG+PRGFAFV + + A+D L
Sbjct: 3 IYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAIDTL 62
Query: 98 NGAQILGRTIRVDH 111
+GA+ +GR+++V+
Sbjct: 63 DGAEWMGRSMKVNQ 76
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG +V V +VRD+ TG RGF +V +
Sbjct: 276 DLATETSSRDKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLF 335
Query: 85 EDQRSTILAVDNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRAFQRGE 143
E+ + LA+ LN ++++GR +RV V K K K+ + + + ++G+ A + +
Sbjct: 336 ENTDAVHLAL-KLNNSELMGRKLRVMRSVHKEKLKQNSNLSLKNVSKPKQGLNFASKSAQ 394
Query: 144 CTRG 147
++G
Sbjct: 395 NSKG 398
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
A S +YVG + F+LTE D+ VF GE+ V+L RD TG+ +GFAFV Y+
Sbjct: 403 APPPGSMQLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSED 462
Query: 90 TILAVDNLNGAQILGRTIRVDHV 112
+A+ +++G + GR ++V+ V
Sbjct: 463 ARMALQSMDGFDLAGRQLKVNTV 485
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF + D+ +FA GE+V+ +L ++ TG+ RGFAF+ D + A+D L
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVNCSLPLERDTGRKRGFAFIEMADADTETRAIDAL 62
Query: 98 NGAQILGRTIRVD 110
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 28 WHAKY-KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
W A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+
Sbjct: 28 WKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 87
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAK 114
A+ +NG + GR IRVD K
Sbjct: 88 IDDAKDAMMAMNGKSVDGRQIRVDQAGK 115
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+ F+ Y+ +A++ +
Sbjct: 210 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKMALEQM 269
Query: 98 NGAQILGRTIRVDHV-----AKYKKKEEEDE 123
G ++ GRT+RV+ V KY ++E +E
Sbjct: 270 EGFELAGRTLRVNTVHEKGTVKYTQQESLEE 300
>gi|50419577|ref|XP_458315.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
gi|49653981|emb|CAG86393.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
Length = 235
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+G IPFD TE +L + G ++D+ L+ D TGK RG+AF+ Y D + AV NL
Sbjct: 7 VYIGNIPFDHTEEQVLEIAKSVGPVIDLKLLFDPMTGKSRGYAFIKYGDHETAASAVRNL 66
Query: 98 NGAQILGRTIR 108
N I R I+
Sbjct: 67 NNMAIGNRNIK 77
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|322693277|gb|EFY85143.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 309
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F++ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDH 111
N +++GR +RVD
Sbjct: 70 NDFEVMGRKLRVDF 83
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+++G +PF E ++ +VF+ CG I++V +VRD TG +GFA+V + + + LA+
Sbjct: 186 IFIGNVPFTANEEEIRSVFSDCGAILNVRIVRDAQTGMGKGFAYVTFAPEANMDLALSRH 245
Query: 98 NGAQILGRTIRVD 110
Q+ GR +RV+
Sbjct: 246 ETVQLHGRLLRVE 258
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + +TE DL FA+ G + V L D+ TG+PRGFAFV E A++ L
Sbjct: 3 IYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+++GG+ E DL +VF + G IV V L++D+ T K RGFAFV +E + A ++
Sbjct: 9 LFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 157
NG + G++I+V+ K E RG R + G G E
Sbjct: 69 NGKALDGKSIKVEQAN--KPSFESGRRGPPPAPRSRGPPRGLRHGRGGSG--------EA 118
Query: 158 RAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSI 216
R GP R GH G+S N SS + G P QS + KRS
Sbjct: 119 R------GPP----RGGHMDDSGYSLNFNMGSSMGP---LLVKRGAPPQSGQPSPKRSA 164
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T+ DL VF + G + V + D+ TG+PRGFAFV + A++ L
Sbjct: 3 IYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GAQ +GR ++V+ K K +EE
Sbjct: 63 DGAQWMGRDLKVN---KAKPREE 82
>gi|328774055|gb|EGF84092.1| hypothetical protein BATDEDRAFT_84811 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+++G + + + E L FA GE+++ N+ RD+ +G+ RGFAFV ++D + + A++ L
Sbjct: 37 LFIGNLAWSVDEQTLANAFAVHGELIECNIARDRESGRARGFAFVTFQDDDAALKAIEAL 96
Query: 98 NGAQILGRTIRV 109
NGA+I R IRV
Sbjct: 97 NGAEIADRAIRV 108
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V++G IPFD+TE ++ F CG+I V +V+D+ +G RG +V +E+Q S LA++ L
Sbjct: 436 VFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFENQDSVTLALE-L 494
Query: 98 NGAQILGRTIRV 109
NG + R IRV
Sbjct: 495 NGTNLKNREIRV 506
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+D+ + V I F T DL +F +CG++VDV + RD+ TG RGFAFV Y+
Sbjct: 13 RDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKY 115
A+D L+G + GR I V AKY
Sbjct: 73 AIDRLDGRNVDGRNIMV-QFAKY 94
>gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear ribonucleoprotein HRP1 [Neurospora
crassa]
Length = 344
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA +++G IP++ T+ +L +F + DV + D+ TG PRGFA + D + + A+
Sbjct: 177 SACLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNAL 236
Query: 95 DNLNGAQILGRTIRVDH---VAKYKKKEEEDEETRQRMREER 133
+ L G Q+ RTI++D+ A + +E E R R++R
Sbjct: 237 EKLQGTQLGERTIKIDYAQPAAARQPRENNGERREYRPRQQR 278
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+V I FD TE L F + G + DV L RD G +G+ FV + + + A +
Sbjct: 90 AFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDP-RGLSKGYGFVTFATREALEEACSQV 148
Query: 98 NGAQILGRTIRVD 110
+G+ GR I V+
Sbjct: 149 DGSFWHGRRISVE 161
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + +T+ DL VF++ G + V L D+ TG+ RGF FV E + + A+ L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEMESEAAETAAISAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDE 123
+GA+ +GR ++V+ K + KEE+++
Sbjct: 63 DGAEWMGRALKVN---KARPKEEKND 85
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E A ++
Sbjct: 10 LFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 98 NGAQILGRTIRVDHVAK 114
NG + G++I+V+ K
Sbjct: 70 NGKSLDGKSIKVEQATK 86
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F TE +L F Q GE+ VN++ D+ TG+ RGFAFV D A++NL
Sbjct: 68 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 127
Query: 98 NGAQILGRTIRVD 110
NG +I GR++ V+
Sbjct: 128 NGHEIDGRSVTVN 140
>gi|261488392|emb|CBH19571.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 188
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 98 ---NGAQI-LGRTIRVDHV 112
NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K + ++VGG+P E D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFK-TKKIFVGGLPQAQAEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+RD T + RGF F+ + + VD+L
Sbjct: 143 MRDHQTKRSRGFGFIVFSSDQ----VVDDL 168
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T+ DL AVFA+ G + VNL D+ TG+ RGFAFV + A++ L
Sbjct: 3 IYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFVEMATETEETAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDMKVN 75
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 302 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 361
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 128
V +E+ S LA+ LN ++++GR +RV +K ++++ R +
Sbjct: 362 VLFENTDSVHLAL-KLNNSELMGRKLRVMRSVNKEKLKQQNSNPRLK 407
>gi|255636731|gb|ACU18701.1| unknown [Glycine max]
Length = 195
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D + +YVGG+P+D TE + VF G I+DV ++ D T + + + FV + + RS I A
Sbjct: 5 DDSSIYVGGLPYDATEETIRTVFNLYGAILDVKIINDPRT-RGKCYCFVTFTNPRSAIDA 63
Query: 94 VDNLNGAQILGRTIRVDHV 112
++++NG I GR ++V+ V
Sbjct: 64 INDMNGRTIDGRVVKVNGV 82
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y +
Sbjct: 15 RESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARD 74
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 138
A+D L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 75 AIDGLDGMRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 121
>gi|298246745|ref|ZP_06970550.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297549404|gb|EFH83270.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 109
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+P+ TE DL+ +F Q G++ ++ D+ TG+ +GF FV +A++ L
Sbjct: 3 IYVGGLPYQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARVAIEQL 62
Query: 98 NGAQILGRTIRVD 110
NG+ + RTI V+
Sbjct: 63 NGSTLGNRTITVN 75
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|121543726|gb|ABM55548.1| putative peptidyl-prolyl cis-trans isomerase E [Maconellicoccus
hirsutus]
Length = 291
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ +L E L VF G+I+D+ + D T K RGFAF+ +E A+DN+
Sbjct: 9 IYVGGLADELDEKILNNVFLTFGDILDIQIPLDYETEKHRGFAFIEFEAPEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRT+RV+ K KE
Sbjct: 69 NESELFGRTMRVNLAKPQKVKE 90
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
+A +Y+GG+ +DL E + F G+I V+L D+ TG P+GF +V + D A+
Sbjct: 310 AATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAAL 369
Query: 95 DNLNGAQILGRTIRVDH 111
+ +NG ++ GR IRVD+
Sbjct: 370 EAMNGKELSGRRIRVDY 386
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
+A VYVGG+ +++ L + F CGE+V+ ++ D K +GF FV ++ AV
Sbjct: 211 TANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAV 270
Query: 95 DNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRA 138
+ G +I GR IR D A +K + E Q+ ++R A
Sbjct: 271 -AMTGHEIDGRAIRCDFAA--EKTDNPVERRAQKFNDQRSAPAA 311
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YV G+P D + DL+ F + G++ D+ + + G+PRGFA+V ++ Q LA++ +
Sbjct: 6 IYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEKI 65
Query: 98 NGAQILGRTIRVD 110
ILG+T+ V+
Sbjct: 66 PSIVILGQTLNVE 78
>gi|393215994|gb|EJD01485.1| hypothetical protein FOMMEDRAFT_142096 [Fomitiporia mediterranea
MF3/22]
Length = 355
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S V+VG +P+++ E +L+ F G +V LV D+ TGKP+G+ F + D + + AV
Sbjct: 2 SKVVFVGNVPYNMQEEELIETFKTVGHVVGFRLVYDRDTGKPKGYGFCEFADHETAMSAV 61
Query: 95 DNLNGAQILGRTIRVD 110
NLN GR +R+D
Sbjct: 62 RNLNNTDCGGRNLRID 77
>gi|392375173|ref|YP_003207006.1| RNP-1 like RNA-binding protein [Candidatus Methylomirabilis
oxyfera]
gi|258592866|emb|CBE69175.1| RNP-1 like RNA-binding protein (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGE-IVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDN 96
VYVG +PFD E L +F + G + DV ++ D+ TG+ RGFAFV E+Q A+
Sbjct: 33 VYVGNLPFDTDEAALRTLFEEGGRRVADVKIITDRDTGRARGFAFVEMENQSDAQAAIQA 92
Query: 97 LNGAQILGRTIRVDH 111
LNG Q+ GR + V+
Sbjct: 93 LNGRQVGGRALTVNE 107
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG +GF +
Sbjct: 253 IRVDLASETSSRDKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGY 312
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRV 109
V +E+ + LA+ LN ++++GR +RV
Sbjct: 313 VLFENTDAVHLAL-KLNNSELMGRKLRV 339
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL AVF++ G+I V+L D+ +G+PRGFAFV +++ A+ L
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEEED 122
+ A+ +GR ++V+ K K +E D
Sbjct: 63 DEAEWMGRALKVN---KAKPRESSD 84
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ F+ E L VF++ G++ +V ++RD+ TG RGF FV +E A+ ++
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 67 NGRSLEGRQIRVDRAEK 83
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D+T+ ++ AVFA+ G + +V++ +D+ TG+ RGFAFV + A++ L
Sbjct: 3 IYVGNLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFVELGNDAEESKAIEEL 62
Query: 98 NGAQILGRTIRVD 110
GA+ +GRT++V+
Sbjct: 63 EGAEWMGRTLKVN 75
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+++GG+ D E L AVF + G I++V L++D+ T + RGFAF+ +E+ A ++
Sbjct: 10 LFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATKDM 69
Query: 98 NGAQILGRTIRVDHVAK 114
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKLIKVEQANK 86
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG +PF TE +++ F + GE+ V + D+ TG+PRGFAFV E + + A+D+L
Sbjct: 3 LFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDDL 62
Query: 98 NGAQILGRTIRVD 110
+GA R IRV+
Sbjct: 63 DGATWNNREIRVN 75
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG IV V +VRD TG RGF +V +
Sbjct: 281 DLASETSSRDKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLF 340
Query: 85 EDQRSTILAVDNLNGAQILGRTIRV 109
E+ + LA+ LN ++++GR +RV
Sbjct: 341 ENTDAVHLAL-KLNNSELMGRKLRV 364
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D +++GG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLN 98
+VGG+ + + DL F+Q GE++D ++ D+ TG+ RGF FV ++D++S A++ +N
Sbjct: 10 FVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMN 69
Query: 99 GAQILGRTIRVDH 111
G ++ GR+I V+
Sbjct: 70 GKELDGRSITVNE 82
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y +
Sbjct: 15 RESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARD 74
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 138
A+D L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 75 AIDGLDGXRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 121
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG +P+ TE ++ FA G + +V +V D+ TG+PRGFAFV + ++ AV+ L
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG GR +RV++ K
Sbjct: 68 NGVAFNGRNLRVNYANK 84
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG + ++ + +L +FA+CG++V V LVRDK TG +GF FV ++ LA++ +
Sbjct: 344 VFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALE-M 402
Query: 98 NGAQILGRTIRVDHVAK 114
G ++ GR IRV +K
Sbjct: 403 TGREVSGRPIRVSPFSK 419
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRD+ TG +GF +
Sbjct: 273 IRVDLASATSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGY 332
Query: 82 VAYEDQRSTILAVDNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGV 135
V +E+ S LA+ LN ++++GR +RV V K K K+ + + + + ++G+
Sbjct: 333 VLFENTDSVHLALK-LNNSELMGRKLRVMRSVNKEKLKQNSNPQLKNVSKPKQGL 386
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+D+ + V I F T DL +F + G++VDV + RD+ TG+ RGFAFV Y+
Sbjct: 13 RDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQK 72
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEE 120
AVD L+G + GR I V AKY E
Sbjct: 73 AVDRLDGRVVDGREIMV-QFAKYGPNAE 99
>gi|367015616|ref|XP_003682307.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
gi|359749969|emb|CCE93096.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
Length = 279
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S VY+G IP+D TE +L + + G + ++ ++ D TGK +G+AFV Y+D S+ AV
Sbjct: 15 SKVVYLGSIPYDQTEEQILDLCSNVGPVTNLKMMFDPQTGKSKGYAFVEYKDLESSASAV 74
Query: 95 DNLNGAQILGRTIRVDHVA 113
NLNG Q R ++ + +
Sbjct: 75 RNLNGYQFGSRLLKCGYAS 93
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL +VFA+ G + V++ D+ TG+PRGFAFV + A++ L
Sbjct: 3 IYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 51 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 110
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 111 MMAMNGKSVDGRQIRVDQAGK 131
>gi|400599253|gb|EJP66957.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 316
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D S AV NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDAETGRPKGFGFAEYPDTDSASSAVRNL 69
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEET 125
N +I+GR +RVD +++K +D+ T
Sbjct: 70 NDHEIMGRKLRVDF--SHEQKVADDDYT 95
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|254569922|ref|XP_002492071.1| Cleavage and polyadenylation factor I (CF I) component
[Komagataella pastoris GS115]
gi|238031868|emb|CAY69791.1| Cleavage and polyadenylation factor I (CF I) component
[Komagataella pastoris GS115]
gi|328351439|emb|CCA37838.1| Cleavage stimulation factor 64 kDa subunit, tau variant Short=CSTF
64 kDa subunit, tau variant; , tau variant [Komagataella
pastoris CBS 7435]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+G +PFD TE +L V G +VD L D+ TGKP+G+A+V Y+D + AV NL
Sbjct: 8 VYLGSLPFDQTEQQVLEVARSVGPVVDFKLFFDQETGKPKGYAYVEYQDMETAASAVRNL 67
Query: 98 NGAQILGRTIRVDH 111
N + R I+ +
Sbjct: 68 NNYTMGNRNIKCSY 81
>gi|430812117|emb|CCJ30453.1| unnamed protein product [Pneumocystis jirovecii]
Length = 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
A S V+VG IP+D++E L +F Q G I LV DK T KP+G+ F Y D +
Sbjct: 2 ASKPPSKVVFVGNIPYDVSEEQLKDIFRQIGPINRFRLVFDKETNKPKGYGFCEYPDVAT 61
Query: 90 TILAVDNLNGAQILGRTIRVD 110
AV NLN I GR +RVD
Sbjct: 62 ASAAVRNLNNHDINGRQLRVD 82
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ F+ TE L VF++ G++ +V +V+D+ + + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YV +P D+TE +L +F+ G IV +NL++DK TG PRG AFV ++ + + A+++L
Sbjct: 115 LYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIEHL 174
Query: 98 NGAQILGRT 106
NG GRT
Sbjct: 175 NGTIPHGRT 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+ + +P +LTE +L +F G + + ++RD TG GF FV Y+ I A+ L
Sbjct: 29 LIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTL 88
Query: 98 NGAQILGRTIRVDH 111
NG QI + I+V +
Sbjct: 89 NGLQIQNKRIKVSY 102
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTIL 92
+ S +YVG IP DL +L +F + G IV L D +G P+GFAFV +ED R
Sbjct: 3 RSSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEE 62
Query: 93 AVDNLNGAQILGRTIRVDHVAKYKKKEEE 121
+ D L G +I R++R++ KK +E
Sbjct: 63 SFDRLQGYRIGKRSLRLEFATGTKKTPDE 91
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + ++ T+ DL FA GE+ VNL+ DK TG+ +GF FV + A+ L
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 98 NGAQILGRTIRVD 110
NG + GR+I+V+
Sbjct: 63 NGTDLQGRSIKVN 75
>gi|374298432|ref|YP_005050071.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332551368|gb|EGJ48412.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 104
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF TE D+ +FA G + V L+ D+ TG+PRGF FV + +T A L
Sbjct: 5 LYVGNLPFTATEDDIRNLFATHGNVNSVKLISDRETGRPRGFGFVEMDADGATS-AEQAL 63
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
NGA GRT++V+ + ++E
Sbjct: 64 NGASFGGRTLKVNEAQQKPRRE 85
>gi|258405611|ref|YP_003198353.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257797838|gb|ACV68775.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF TE ++ + F GE+ V L+ D+ TG+PRGF FV D A++NL
Sbjct: 5 IYVGNLPFSATEDEVRSAFGAYGEVTSVKLIEDRETGRPRGFGFVEMSDGGEQ--AIENL 62
Query: 98 NGAQILGRTIRVDH 111
+G GRT++V+
Sbjct: 63 DGQDFGGRTLKVNE 76
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG I FD+T+ DL +F G++ D L ++ TG+PRGFAFV + A+ +L
Sbjct: 4 LYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIADL 63
Query: 98 NGAQILGRTIRVD 110
+G +I GR +RV+
Sbjct: 64 DGKEIDGRALRVN 76
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTI 91
+D+ + V I F T DL +F +CG++VDV + RD+ TG RGFAFV Y+
Sbjct: 12 IRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 92 LAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEE 124
A+D L+G + GR I V A +K + +E E
Sbjct: 72 KAIDRLDGRNVDGRNIMV-QFANHKGRVKEGVE 103
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
AK + A +++ IP D + ++ A+FAQ G+++ ++ + TG+ RGF FV+Y+ RS
Sbjct: 61 AKGPEGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSARS 120
Query: 90 TILAVDNLNGAQILGRTIRVDH 111
A+ +LNG + G+ ++V H
Sbjct: 121 AADAISHLNGYSVKGKRLKVQH 142
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++TE DL +VF + G + V++ D+ TG+ RGFAFV E A+ L
Sbjct: 3 IYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFVEMESPSQEDSAISTL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTLKVN 75
>gi|449443125|ref|XP_004139331.1| PREDICTED: uncharacterized protein LOC101205569 [Cucumis sativus]
Length = 346
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D + +YVGG+P+D TE L +F G +V V ++ D+ T + + + FV + + RS I A
Sbjct: 5 DDSSIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRST-RGKCYGFVTFTNPRSAIDA 63
Query: 94 VDNLNGAQILGRTIRVDHV 112
+ +++G I GR +RV+ V
Sbjct: 64 IKDMDGRTIEGRVVRVNGV 82
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ ++VGG+ + T+ L VF G I + N+V D+ TG+ RGF FV + DQ S AV
Sbjct: 2 SSKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAV 61
Query: 95 DNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREER 133
LNG + GR I V VA+ K + + + T ++ + +R
Sbjct: 62 SELNGKDLDGRNIVV-SVAEDKSRSDRNRNTNRKFQRDR 99
>gi|339255520|ref|XP_003370865.1| cleavage stimulation factor protein [Trichinella spiralis]
gi|316963145|gb|EFV48928.1| cleavage stimulation factor protein [Trichinella spiralis]
Length = 256
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
S+ + + ++ VG I +D TE +L +F+Q G +V LV D+ TGKP+G+ F Y D
Sbjct: 14 SYKSVFGENRCFAVGNISYDATEEELKEIFSQVGPVVGFRLVFDRETGKPKGYGFCEYLD 73
Query: 87 QRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE 120
Q + + A NL + GR +RVD + +EE
Sbjct: 74 QETALSAQRNLCNYEFHGRPLRVDAAVGDRSREE 107
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++TE L F G+I D+ + D + K RGFAF+ YE+ A+DN+
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ + KE+
Sbjct: 68 NDSELCGRTIRVNLAKPVRVKED 90
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF +E ++ +FAQ GE+ +V L+ D+ TG+PRGF FV + A++ L
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPADADA-AIEAL 63
Query: 98 NGAQILGRTIRVDH 111
NG ++ GR +R++
Sbjct: 64 NGTELDGRALRINE 77
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG I F+LTE DL +F GE+ V L ++ TG+ RG+ FV Y D A++ +
Sbjct: 228 LYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKM 287
Query: 98 NGAQILGRTIRV 109
NG ++ GR IRV
Sbjct: 288 NGFELAGRAIRV 299
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++TE L F G+I D+ + D + K RGFAF+ YE+ A+DN+
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ + KE+
Sbjct: 68 NDSELCGRTIRVNLAKPVRVKED 90
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans isomerase
E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVGG+ ++ + L A F G+IVD+ + D T K RGFAF+ +E A+DN+
Sbjct: 9 IYVGGLAEEVDDKVLNAAFIPFGDIVDIQIPLDYETEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 98 NGAQILGRTIRVDHVAKYKKKE 119
N +++ GRTIRV+ + KE
Sbjct: 69 NDSELFGRTIRVNLAKPQRIKE 90
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG +P+ E D+ F Q G + V +V D+ TG+PRGF F +E + + AV ++
Sbjct: 5 VFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAVGSM 64
Query: 98 NGAQILGRTIRVD 110
N A+ +GR +RVD
Sbjct: 65 NHAEFMGRQLRVD 77
>gi|390439660|ref|ZP_10228043.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389836940|emb|CCI32167.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +PF++ + D++ VF + G+I V+L D+ T K RGFAFV E A+ L
Sbjct: 3 IYVGNLPFEVNQEDVVEVFTEYGKIKRVHLPIDRETKKKRGFAFVEMETPAQESAAIAAL 62
Query: 98 NGAQILGRTIRVDH 111
NGA+ +GR ++V+
Sbjct: 63 NGAEWMGRELKVNQ 76
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRS 89
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+
Sbjct: 12 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 71
Query: 90 TILAVDNLNGAQILGRTIRVDHVAK 114
A+ +NG + GR IRVD K
Sbjct: 72 AKDAMMAMNGKSVDGRQIRVDQAGK 96
>gi|302831616|ref|XP_002947373.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
gi|300267237|gb|EFJ51421.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D +H K +YVGG+ F T+ D+ VF++ G++++V LV D T + +G+AFV +
Sbjct: 71 DTGYHNK------IYVGGLEFSATKEDIAEVFSRAGKVLNVQLVMDHETQRSKGYAFVTF 124
Query: 85 EDQRSTILAVDNLNGAQILGRTIRVD 110
D + A+ +NG + G+ ++V+
Sbjct: 125 ADDDAYEYAIKRMNGVTVRGKEVKVN 150
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 98
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + TE DL AVF GE+ V L D+ TG+ RGFAFV ++ A+ L
Sbjct: 3 IYVGNLSYRATEADLRAVFTDYGEVTRVVLPTDRETGRMRGFAFVDLSEESQEDEAISEL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR IRV+ K K KE+
Sbjct: 63 DGAEWMGRQIRVN---KAKPKED 82
>gi|428207498|ref|YP_007091851.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009419|gb|AFY87982.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 98
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +++T+ DL A FA+ G + V L D+ TG+ RGFAFV + A+D L
Sbjct: 3 IYVGNLSYEVTQEDLSAAFAEYGSVKRVQLPTDRETGRMRGFAFVEMDTDTEETAAIDAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRNLKVN 75
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F TE +L F Q GE+ VN++ D+ TG+ RGFAFV D A++NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 98 NGAQILGRTIRVD 110
NG +I GR++ V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F TE +L F Q GE+ VN++ D+ TG+ RGFAFV D A++NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 98 NGAQILGRTIRVD 110
NG +I GR++ V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + F TE +L F Q GE+ VN++ D+ TG+ RGFAFV D A++NL
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 98 NGAQILGRTIRVD 110
NG +I GR++ V+
Sbjct: 117 NGHEIDGRSVTVN 129
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
+S ++VG + +++ + L + FA+CGE+V + D+ TGK RGF V + D S A
Sbjct: 341 ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQKA 400
Query: 94 VDNLNGAQILGRTIRVDHVAKYKKKEE 120
+D +NG +I GR + VD K ++
Sbjct: 401 IDTMNGKEIDGRPVNVDRAPGLNKNQQ 427
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ ++VG + +D TE + F + GE+ V L D+ +G+P+GF +V + D + A
Sbjct: 443 SSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAF 502
Query: 95 DNLNGAQILGRTIRVDH 111
+ L+G +I GR+IR+D+
Sbjct: 503 EALSGTEIGGRSIRLDY 519
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVG IP+ TE + F+Q G + +V +V D+ TG+P+GF F + D+ AV+ L
Sbjct: 20 VYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNTL 79
Query: 98 NGAQILGRTIRVDHVAK 114
NG GR++RV+ K
Sbjct: 80 NGTDFNGRSLRVNWANK 96
>gi|152990027|ref|YP_001355749.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
gi|151421888|dbj|BAF69392.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
Length = 89
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG +P+ E D+ +FAQ GE+ V L+ D+ TG+PRGF FV +D S A++ L
Sbjct: 4 IYVGNLPYSSNEEDVRELFAQYGEVTSVKLINDRETGRPRGFGFVEMDDS-SADSAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+G++ GR+++V+
Sbjct: 63 DGSEFGGRSLKVN 75
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILA 93
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 94 VDNLNGAQILGRTIRVDHVAK 114
+ +NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 81
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + +D++E DL +VFA GE+ V L D+ T + RGF FV + I A++ L
Sbjct: 3 IYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFVEMSNDDEEIKAIETL 62
Query: 98 NGAQILGRTIRVD 110
+GAQ +GR I+V+
Sbjct: 63 DGAQWMGRQIKVN 75
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VYVGG+ ++TE L F G+I D+ + D + K RGFAF+ YE+ A+DN+
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
N +++ GRTIRV+ + KE+
Sbjct: 68 NDSELCGRTIRVNLAKPVRVKED 90
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+YVG + + +TE DL F + G + V L D+ TG+PRGFAFV E A+D L
Sbjct: 3 IYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVEMETDVQEQAAIDAL 62
Query: 98 NGAQILGRTIRVDHVAKYKKKEE 120
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|303271523|ref|XP_003055123.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463097|gb|EEH60375.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 432
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNG 99
VG + +D +E L F G I D ++ D+ TG+P+GFAF+ ++D + + AV ++G
Sbjct: 2 VGNMSYDTSEQTLAGAFGHLGRITDCKVITDRDTGRPKGFAFITFDDPNAAMQAVQTMSG 61
Query: 100 AQILGRTIRVD 110
+ GR++RV+
Sbjct: 62 QNVDGRSVRVE 72
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
VY+G + +D++E DL +VFA+ G + V + D+ TG+PRGFAFV + A++ L
Sbjct: 3 VYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEMDSDSEEEAAIEAL 62
Query: 98 NGAQILGRTIRVD 110
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|388583458|gb|EIM23760.1| hypothetical protein WALSEDRAFT_53459 [Wallemia sebi CBS 633.66]
Length = 306
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
+ +A+ S V+VG +P+D+ E +++ +F++ G + D + DK TGKP+G+ FV Y D
Sbjct: 3 TPNAQLLGSKIVFVGNLPYDINEEEVVRIFSEVGPVKDFRMNFDKHTGKPKGYGFVEYYD 62
Query: 87 QRSTILAVDNLNGAQILGRTIRVD 110
+ AV NL+ + GR +RVD
Sbjct: 63 GDTAASAVRNLHDNPVGGRPLRVD 86
>gi|156044768|ref|XP_001588940.1| hypothetical protein SS1G_10488 [Sclerotinia sclerotiorum 1980]
gi|154694876|gb|EDN94614.1| hypothetical protein SS1G_10488 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 153
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKG---TGKPRG 78
++D A W A VYVGG+ +T +L A F GEI DV++ + +G T RG
Sbjct: 1 MTDQARWKAT------VYVGGLSHMVTTANLEAAFLPFGEIADVSIPKAEGPNSTEPHRG 54
Query: 79 FAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERG 134
F +V +ED T A+DN++ +++ G+ I+V + AK K E ++ + E+ G
Sbjct: 55 FGYVEFEDPEDTKDAIDNMDQSELFGKVIKV-NAAKPPKNANEGLGSKTALWEQEG 109
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 98 NGAQILGRTIRVDHVAK 114
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
S+ +++G + FD+TE D+ F++ GE+ V L +D +G+P+GF +V + Q S A+
Sbjct: 277 SSTLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAAI 336
Query: 95 DNLNGAQILGRTIRVDH 111
D + G ++ GR +R+D
Sbjct: 337 DAMTGQELAGRPLRLDF 353
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
V+VG + +++ L + G++ + D+ TGK RGF +V + + A +
Sbjct: 181 VWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEEG 240
Query: 98 NGAQILGRTIRVD 110
G Q+ GR IR+D
Sbjct: 241 QGKQVDGRAIRID 253
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAV 94
SA ++VG + +D TE + VF + G++ V L D+ TG+P+GF +V + D + A
Sbjct: 396 SAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAF 455
Query: 95 DNLNGAQILGRTIRVDH 111
+ L+G ++ GR IR+D+
Sbjct: 456 EGLSGTEVAGRPIRLDY 472
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
++VG + +++ L FA+CGE++ + D+ TGK RGF +V + + + A L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEA-VEAALLL 357
Query: 98 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREER 133
NG +I GR + +D K E++D+ + R E+
Sbjct: 358 NGKEIDGRPVNID------KSEQKDKGAAREKRAEK 387
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNL 97
+Y+G +P+ +T L VFA+ G +V V ++ DK T + RGFAFV A+
Sbjct: 117 LYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 176
Query: 98 NGAQILGRTIRVD 110
+G+QI GRT+RV+
Sbjct: 177 DGSQIGGRTVRVN 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 27 SWHAKYKDSAY-VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
S + K+ DS + +Y G + + LT L F I+ ++ D+ +GK RGF FV++E
Sbjct: 208 SSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFE 267
Query: 86 DQRSTILAVDNLNGAQILGRTIRVDHVA 113
A++++NG ++ GR +R++ A
Sbjct: 268 TAEDAESALESMNGVEVEGRPLRLNIAA 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,051,098,253
Number of Sequences: 23463169
Number of extensions: 228419583
Number of successful extensions: 1118808
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18750
Number of HSP's successfully gapped in prelim test: 18933
Number of HSP's that attempted gapping in prelim test: 885529
Number of HSP's gapped (non-prelim): 160368
length of query: 297
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 156
effective length of database: 9,050,888,538
effective search space: 1411938611928
effective search space used: 1411938611928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)