BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022425
         (297 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O22315|SRSF1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1
           SV=1
          Length = 303

 Score =  291 bits (746), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 164/205 (80%), Gaps = 10/205 (4%)

Query: 1   MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAED 60
           MSSRSSRT+YVGNLPGD R REVEDLF KYGP+V IDLK+PPRPPGYAF+EF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV---------SRRSDYR 111
           AI GRDGY+FDG+RLRVELAHGGRR S       +    G             SRRS++R
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120

Query: 112 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 171
           VLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  G TG+VDYT Y+DMKYA++KLD +E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180

Query: 172 FRNAFSRSYVRVREYDSRRSYSRSP 196
           FRNAFS  YVRVREYDSR+  SRSP
Sbjct: 181 FRNAFSNGYVRVREYDSRKD-SRSP 204


>sp|Q5ZML3|SRSF1_CHICK Serine/arginine-rich splicing factor 1 OS=Gallus gallus GN=SRSF1
           PE=1 SV=3
          Length = 257

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 15/204 (7%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+YRV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 185
           KDHMR AGDVC++ VFRD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+ 
Sbjct: 138 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK- 193

Query: 186 YDSRRSYSRSPSRSPYYSRSRSRS 209
                       RSP Y RSRSRS
Sbjct: 194 --------VDGPRSPSYGRSRSRS 209


>sp|Q6NYA0|SRS1B_DANRE Serine/arginine-rich splicing factor 1B OS=Danio rerio GN=srsf1b
           PE=2 SV=1
          Length = 245

 Score =  176 bits (445), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 124/179 (69%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R ++VED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+YRV+V+GLP S SWQDL
Sbjct: 77  DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ VFRD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192


>sp|Q9NEW6|RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis
           elegans GN=rsp-3 PE=1 SV=2
          Length = 258

 Score =  172 bits (436), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 125/196 (63%), Gaps = 21/196 (10%)

Query: 5   SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
             + +YVGNLPGD R +EVED+F+KYG I  +D+K   R P +AF+EFED+RDAEDA+R 
Sbjct: 7   EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRA 65

Query: 65  RDGYNFDGYRLRVE--------------LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDY 110
           RDGY FDG R+RVE              L  GG                   G  RR+ Y
Sbjct: 66  RDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGR--GGGPQRRTGY 123

Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
           RV+V GLP + SWQDLKDHMR AGDVC++ V RD    TG+V++T Y+D+KYA+RKLD +
Sbjct: 124 RVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDDT 180

Query: 171 EFR-NAFSRSYVRVRE 185
           +FR +    +Y+RVRE
Sbjct: 181 KFRSHEGETAYIRVRE 196


>sp|Q5R7H2|SRSF1_PONAB Serine/arginine-rich splicing factor 1 OS=Pongo abelii GN=SRSF1
           PE=2 SV=3
          Length = 248

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+ RV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ V+RD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193


>sp|Q3YLA6|SRSF1_PIG Serine/arginine-rich splicing factor 1 OS=Sus scrofa GN=SRSF1 PE=2
           SV=3
          Length = 248

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+ RV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ V+RD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193


>sp|Q6PDM2|SRSF1_MOUSE Serine/arginine-rich splicing factor 1 OS=Mus musculus GN=Srsf1
           PE=1 SV=3
          Length = 248

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+ RV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ V+RD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193


>sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1
           PE=1 SV=2
          Length = 248

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+ RV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ V+RD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193


>sp|Q0VCY7|SRSF1_BOVIN Serine/arginine-rich splicing factor 1 OS=Bos taurus GN=SRSF1 PE=2
           SV=1
          Length = 248

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 6/179 (3%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 126
           ++DGYRLRVE    GR             +   R    SRRS+ RV+V+GLP S SWQDL
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 184
           KDHMR AGDVC++ V+RD    TG+V++   +DM YA+RKLD ++FR +    +Y+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193


>sp|Q7SXP4|SRS1A_DANRE Serine/arginine-rich splicing factor 1A OS=Danio rerio GN=srsf1a
           PE=2 SV=2
          Length = 257

 Score =  171 bits (433), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 124/189 (65%), Gaps = 16/189 (8%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R ++VED+FYKYG I DIDLK     P +AF+EFED RDAEDA+  RDGY
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV------------SRRSDYRVLVTG 116
           ++DGYRLRVE    GR              GG  G             SRRS+YRV+V+G
Sbjct: 77  DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSG 136

Query: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 175
           LP S SWQDLKDHMR AGDVC++ VFRD    TG+V++   +DM YA+RKLD ++FR + 
Sbjct: 137 LPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHE 193

Query: 176 FSRSYVRVR 184
              +Y+RV+
Sbjct: 194 GETAYIRVK 202


>sp|Q6DII2|SRSF1_XENTR Serine/arginine-rich splicing factor 1 OS=Xenopus tropicalis
           GN=srsf1 PE=2 SV=1
          Length = 267

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 125/198 (63%), Gaps = 25/198 (12%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++ED+FYKYG I DIDLK     P +AF+EFED RDAEDA+ GRDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGYRLRVEL-----------------AHGGRRHSSSMDRYSSYSSGGSRG----VSRR 107
           ++DGYRLRVE                    GG               G  RG     SRR
Sbjct: 78  DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137

Query: 108 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
           S+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD    TG+V++   +DM YA+RKL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKL 194

Query: 168 DRSEFR-NAFSRSYVRVR 184
           D ++FR +    +Y+RV+
Sbjct: 195 DNTKFRSHEGETAYIRVK 212


>sp|Q9D0B0|SRSF9_MOUSE Serine/arginine-rich splicing factor 9 OS=Mus musculus GN=Srsf9
           PE=1 SV=1
          Length = 222

 Score =  161 bits (407), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 16/179 (8%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++EDLFYKYG I +I+LK       +AF+ FED RDAEDAI GR+GY
Sbjct: 17  IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76

Query: 69  NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQD 125
           ++   RLRVE    +GGR           +  G   G  +RRSD+RVLV+GLP S SWQD
Sbjct: 77  DYGQCRLRVEFPRTYGGR---------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQD 127

Query: 126 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
           LKDHMR AGDVC++ V +D  GM G+V+Y   +DM+YA+RKLD ++FR +    SY+RV
Sbjct: 128 LKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183


>sp|Q5PPI1|SRSF9_RAT Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus
           GN=Srsf9 PE=1 SV=1
          Length = 221

 Score =  160 bits (404), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/178 (52%), Positives = 121/178 (67%), Gaps = 14/178 (7%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++EDLFYKYG I +I+LK       +AF+ FED RDAEDAI GR+GY
Sbjct: 16  IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75

Query: 69  NFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 126
           ++   RLRVE   A+GGR       R            +RRSD+RVLV+GLP S SWQDL
Sbjct: 76  DYGQCRLRVEFPRAYGGRGGWPRASRNGP--------PTRRSDFRVLVSGLPPSGSWQDL 127

Query: 127 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
           KDHMR AGDVC++ V +D  GM G+V+Y   +DM+YA+RKLD ++FR +    SY+RV
Sbjct: 128 KDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182


>sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9
           PE=1 SV=1
          Length = 221

 Score =  153 bits (387), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 10/176 (5%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVGNLP D R +++EDLFYKYG I +I+LK       +AF+ FED RDAEDAI GR+GY
Sbjct: 16  IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
           ++   RLRVE         +   R      G +   +RRSD+RVLV+GLP S SWQDLKD
Sbjct: 76  DYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129

Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 183
           HMR AGDVC++ V +D  GM   V+Y   +DM+YA+RKLD ++FR +    SY+RV
Sbjct: 130 HMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182


>sp|Q8VE97|SRSF4_MOUSE Serine/arginine-rich splicing factor 4 OS=Mus musculus GN=Srsf4
           PE=2 SV=1
          Length = 489

 Score =  122 bits (305), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 10/168 (5%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +Y+G L    R R+VE  F  YG I+++DLK      GY F+EF+D RDA+DA+   +G 
Sbjct: 4   VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQ 124
           +  G R+ VE A G RR  S     S Y    SG  + G   R++YR++V  L S  SWQ
Sbjct: 59  DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118

Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           DLKD+MR+AG+V ++   + R    G++++ SY DMK A+ KLD +E 
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165


>sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila melanogaster GN=B52 PE=1
           SV=4
          Length = 376

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 24/182 (13%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +YVG LP   R R++E  F  YG   DI +K      GY F+EFEDYRDA+DA+   +G 
Sbjct: 6   VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYS-------------SYSSGGSRGVSR-----RSDY 110
              G R+ VE A G  R S+                   +  +  SR  SR     R++Y
Sbjct: 61  ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120

Query: 111 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 170
           R++V  L S  SWQDLKD+MR+AG+V ++   + R    G+V++ S  DMK AI KLD +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDT 179

Query: 171 EF 172
           E 
Sbjct: 180 EL 181


>sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6
           PE=1 SV=2
          Length = 344

 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 16/174 (9%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +Y+G L  + R ++++  F  YG ++++DLK      GY F+EFED RDA+DA+   +G 
Sbjct: 4   VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58

Query: 69  NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
              G R+ VE A G RR          S      S  +SG  + G   R++YR++V  L 
Sbjct: 59  ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118

Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           S  SWQDLKD MR+AG+V ++   ++R    G++++ SY DMK A+ KLD +E 
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171


>sp|Q3B7L6|SRSF6_BOVIN Serine/arginine-rich splicing factor 6 OS=Bos taurus GN=SRSF6 PE=2
           SV=1
          Length = 345

 Score =  104 bits (260), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 16/174 (9%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +Y+G L  + R ++++  F  YG ++ IDLK      GY F+EFED RDA+DA+   +G 
Sbjct: 4   VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58

Query: 69  NFDGYRLRVELAHGGRRH---------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLP 118
              G R+ VE A G RR          S      S  +SG  + G   R+++R++V  L 
Sbjct: 59  ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118

Query: 119 SSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           S  SWQDLKD MR+AG+V ++   ++R    G++++ SY DMK A+ KLD +E 
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171


>sp|Q09167|SRSF5_RAT Serine/arginine-rich splicing factor 5 OS=Rattus norvegicus
           GN=Srsf5 PE=2 SV=1
          Length = 269

 Score = 95.5 bits (236), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +++G L    R ++VE  F  YG I DIDLK      G+ F+EFED RDA+DA+   DG 
Sbjct: 6   VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
                R+ +E A    R      RYS  +SS   R   R     R++ R++V  L S  S
Sbjct: 61  ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120

Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           WQDLKD MR+AG+V F+   R +    G+V++ SY D+K AI KL   E 
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169


>sp|O35326|SRSF5_MOUSE Serine/arginine-rich splicing factor 5 OS=Mus musculus GN=Srsf5
           PE=1 SV=2
          Length = 269

 Score = 95.5 bits (236), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +++G L    R ++VE  F  YG I DIDLK      G+ F+EFED RDA+DA+   DG 
Sbjct: 6   VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
                R+ +E A    R      RYS  +SS   R   R     R++ R++V  L S  S
Sbjct: 61  ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120

Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           WQDLKD MR+AG+V F+   R +    G+V++ SY D+K AI KL   E 
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169


>sp|Q13243|SRSF5_HUMAN Serine/arginine-rich splicing factor 5 OS=Homo sapiens GN=SRSF5
           PE=1 SV=1
          Length = 272

 Score = 95.5 bits (236), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +++G L    R ++VE  F  YG I DIDLK      G+ F+EFED RDA+DA+   DG 
Sbjct: 6   VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSAS 122
                R+ +E A    R      RYS  +SS   R   R     R++ R++V  L S  S
Sbjct: 61  ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120

Query: 123 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
           WQDLKD MR+AG+V F+   R +    G+V++ SY D+K AI KL   E 
Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 169


>sp|Q23120|RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 OS=Caenorhabditis
           elegans GN=rsp-2 PE=3 SV=1
          Length = 281

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 19/172 (11%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           +Y+G LP     R+VE  F  YG + D+ +K      G+ F++F+D RDA+DA+   +G 
Sbjct: 4   VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58

Query: 69  NFDGYRLRVE-----LAHGGRRHSSSM-DRYSSYSSGGSRGVSRR------SDYRVLVTG 116
              G R+ +E     + +   R  S    R  ++  GG R  S R      + +R+++  
Sbjct: 59  ELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDN 118

Query: 117 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 167
           L +  SWQD+KDH+R+ G +  +S+  + R     IV +TS+DD++ A+ KL
Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHK-RNVNQAIVCFTSHDDLRDAMNKL 169


>sp|P78814|SRP2_SCHPO Pre-mRNA-splicing factor srp2 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=srp2 PE=1 SV=2
          Length = 365

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           L+VG +P      ++ D F  YG I+D  L       G+ F+E ED RDA D +    G 
Sbjct: 6   LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
            F G R+ VE A                S+       RR+ +R++V  L    SWQDLKD
Sbjct: 61  EFMGSRIVVEPAR----GERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKD 116

Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 168
            MR+AG+  F+   R+  G  G+V++++ +DM+ A+  L+
Sbjct: 117 VMRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALTSLN 155


>sp|Q02427|RBP1_DROME RNA-binding protein 1 OS=Drosophila melanogaster GN=Rbp1 PE=2
          SV=3
          Length = 144

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL       E+E  F KYGP+ ++   +   PPG+AF+EFED RDAEDA R  DG 
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70

Query: 69 NFDGYRLRVEL 79
             G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81


>sp|Q8BL97|SRSF7_MOUSE Serine/arginine-rich splicing factor 7 OS=Mus musculus GN=Srsf7
           PE=1 SV=1
          Length = 267

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 5   SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
           S   +YVGNL       E+E  F  YGP+  +   I   PPG+AF+EFED RDAEDA+RG
Sbjct: 38  SETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRG 95

Query: 65  RDGYNFDGYRLRVELAHG 82
            DG    G R+RVEL+ G
Sbjct: 96  LDGKVICGSRVRVELSTG 113


>sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana
           GN=RSP31 PE=1 SV=2
          Length = 264

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 122/289 (42%), Gaps = 44/289 (15%)

Query: 7   RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
           R ++VGN   +TR  ++E LF KYG +  +D+K      GYAF+ FED RDAEDAIR  D
Sbjct: 2   RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56

Query: 67  GYNFDGY---RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSA 121
            + F GY   RL VE A G R              G ++  S     + L  +   P   
Sbjct: 57  NFPF-GYEKRRLSVEWAKGER----------GRPRGDAKAPSNLKPTKTLFVINFDPIRT 105

Query: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 181
              D++ H    G V   ++ R+       V + + +D   A+    RS+  +       
Sbjct: 106 KEHDIEKHFEPYGKVTNVRIRRN----FSFVQFETQEDATKALEATQRSKILDRVVSVEY 161

Query: 182 RVREYDSR--RSYSRSPSR--SPYYSR------SRSRSPYYSRSRSPSRSWSYSPRSRSY 231
            +++ D R  R+  RSP R  SP Y R       R  SP   R  SP    + SP    Y
Sbjct: 162 ALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRY 221

Query: 232 SPRGKYSRRSPSLSPARSAS---QRSPSGSPPRSFSRSRSRSSSPLSSP 277
                Y RR       RS+    QRSP       + R RSRS  P   P
Sbjct: 222 KGPAAYERRRSPDYGRRSSDYGRQRSP------GYDRYRSRSPVPRGRP 264


>sp|P84104|SRSF3_MOUSE Serine/arginine-rich splicing factor 3 OS=Mus musculus GN=Srsf3
          PE=1 SV=1
          Length = 164

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL  +    E+E  F  YGP+  +   +   PPG+AF+EFED RDA DA+R  DG 
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69

Query: 69 NFDGYRLRVELAHGGRR 85
             G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86


>sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3
          PE=1 SV=1
          Length = 164

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL  +    E+E  F  YGP+  +   +   PPG+AF+EFED RDA DA+R  DG 
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69

Query: 69 NFDGYRLRVELAHGGRR 85
             G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86


>sp|Q3SZR8|SRSF3_BOVIN Serine/arginine-rich splicing factor 3 OS=Bos taurus GN=SRSF3
          PE=2 SV=1
          Length = 164

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL  +    E+E  F  YGP+  +   +   PPG+AF+EFED RDA DA+R  DG 
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69

Query: 69 NFDGYRLRVELAHGGRR 85
             G R+RVEL++G +R
Sbjct: 70 TLCGCRVRVELSNGEKR 86


>sp|Q16629|SRSF7_HUMAN Serine/arginine-rich splicing factor 7 OS=Homo sapiens GN=SRSF7
          PE=1 SV=1
          Length = 238

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL       E+E  F  YGP+  +   I   PPG+AF+EFED RDAEDA+RG DG 
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70

Query: 69 NFDGYRLRVELAHG 82
             G R+RVEL+ G
Sbjct: 71 VICGSRVRVELSTG 84


>sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6
          OS=Caenorhabditis elegans GN=rsp-6 PE=3 SV=1
          Length = 179

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVG LP D   +E+E++F ++G I  +   +  RPPG+AF+E++D RDAEDA+R  DG 
Sbjct: 5  VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62

Query: 69 NFDGYRLRVEL 79
             G R RVEL
Sbjct: 63 RICGVRARVEL 73


>sp|Q3T106|SRSF7_BOVIN Serine/arginine-rich splicing factor 7 OS=Bos taurus GN=SRSF7
          PE=2 SV=1
          Length = 235

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL       E+E  F  YGP+  +   I   PPG+AF+EFED RDAEDA+RG DG 
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70

Query: 69 NFDGYRLRVELAHG 82
             G R+RVEL+ G
Sbjct: 71 VICGSRVRVELSTG 84


>sp|Q01560|NOP3_YEAST Nucleolar protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508
           / S288c) GN=NPL3 PE=1 SV=1
          Length = 414

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 31/171 (18%)

Query: 5   SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRG 64
           S+  L+V   P D +  E+ ++F  +GP+ ++ +       G+AF+EFE+   A  AI  
Sbjct: 123 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILN-----GFAFVEFEEAESAAKAIEE 177

Query: 65  RDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
             G +F    L V               YS   +       +R  YR+ +  LP   SWQ
Sbjct: 178 VHGKSFANQPLEV--------------VYSKLPA-------KR--YRITMKNLPEGCSWQ 214

Query: 125 DLKDHMRRAG-DVCFSQV-FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
           DLKD  R    +  FS V  RD  G TG +++ S + +  A+ +L+  EFR
Sbjct: 215 DLKDLARENSLETTFSSVNTRDFDG-TGALEFPSEEILVEALERLNNIEFR 264


>sp|Q9R0U0|SRS10_MOUSE Serine/arginine-rich splicing factor 10 OS=Mus musculus GN=Srsf10
          PE=1 SV=2
          Length = 262

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 8  TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI---PPRPPGYAFLEFEDYRDAEDAIRG 64
          +L+V N+  DTR  ++   F +YGPIVD+ + +     RP G+A+++FED RDAEDA+  
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70

Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSM 90
           D     G ++ ++ A G R+  + M
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQM 96


>sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10
          PE=1 SV=1
          Length = 262

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 8  TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI---PPRPPGYAFLEFEDYRDAEDAIRG 64
          +L+V N+  DTR  ++   F +YGPIVD+ + +     RP G+A+++FED RDAEDA+  
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70

Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSM 90
           D     G ++ ++ A G R+  + M
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQM 96


>sp|Q8VYA5|RSZ33_ARATH Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis
          thaliana GN=RS2Z33 PE=1 SV=1
          Length = 290

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          LYVG L   TR R++E LF +YG + D+D+K       YAF+EF D RDA+DA    DG 
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFGDPRDADDARHYLDGR 67

Query: 69 NFDGYRLRVELAHGGRRHSSSMD 91
          +FDG R+ VE + G  R S   D
Sbjct: 68 DFDGSRITVEFSRGAPRGSRDFD 90


>sp|Q62504|MINT_MOUSE Msx2-interacting protein OS=Mus musculus GN=Spen PE=1 SV=2
          Length = 3644

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 26/163 (15%)

Query: 4   RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
           +++RTL++GNL   T   ++ ++F ++G IVDID+K     P YAFL++ D      AI+
Sbjct: 436 KATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIK 495

Query: 64  GRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASW 123
             DG      RL++     G+   ++                      V + GL S+ S 
Sbjct: 496 KMDGEYLGNNRLKLGF---GKSMPTNC---------------------VWLDGLSSNVSD 531

Query: 124 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 166
           Q L  H  R G V   +V  DR     +V Y+  +D + A+++
Sbjct: 532 QYLTRHFCRYGPVV--KVVFDRLKGMALVLYSEIEDAQAAVKE 572



 Score = 37.7 bits (86), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 4  RSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIR 63
          R +R L+VGNLP + R  ++ + F +YG +  + + +P R        F D+ D + A +
Sbjct: 3  RETRHLWVGNLPENVREEKIIEHFKRYGRVESVKI-LPKRGSEGGVAAFVDFVDIKSAQK 61

Query: 64 GRDGYNFDGYR-LRVELAHGGRRHSSS--MDRYSSYSS 98
            +  N  G R LR +    G   S++  +D   S +S
Sbjct: 62 AHNSVNKMGDRDLRTDYNEPGTIPSAARGLDETVSIAS 99


>sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis
          thaliana GN=RS2Z32 PE=1 SV=1
          Length = 284

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 5/79 (6%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          LYVG L   TR R++E LF +YG + D+D+K       YAF+EF D RDA+DA    DG 
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFSDPRDADDARYYLDGR 67

Query: 69 NFDGYRLRVELAHGGRRHS 87
          +FDG R+ VE + G  R S
Sbjct: 68 DFDGSRITVEASRGAPRGS 86


>sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5
          OS=Caenorhabditis elegans GN=rsp-5 PE=3 SV=3
          Length = 208

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          LY+G +P + R R+VE     YG I +I +K      G+AF++FED RDAEDA    DG 
Sbjct: 4  LYLGKIPYNARERDVERFLKGYGKINNISMKY-----GFAFVDFEDSRDAEDACHDLDGK 58

Query: 69 NFDG--YRLRVELAHG 82
            +G   RL VE+A G
Sbjct: 59 TMEGSSMRLVVEMARG 74


>sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana
           GN=RSP40 PE=1 SV=2
          Length = 350

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 128/331 (38%), Gaps = 71/331 (21%)

Query: 7   RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
           + ++ GN   D R  ++E LF KYG +  +D+K      G+AF+  ED RDAEDAIR  D
Sbjct: 2   KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56

Query: 67  GYNF--DGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQ 124
            + F   G RLRVE     R      D+ S   S  S    R S    ++     +   +
Sbjct: 57  RFEFGRKGRRLRVEWTKSER----GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 112

Query: 125 DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 184
           DL+ H    G +   ++ R+       + Y + +D   A+   + S+  +        V+
Sbjct: 113 DLEKHFEPYGKIVNVRIRRN----FAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVK 168

Query: 185 EYDSRRS------------------------------YSRSPSRSPYYSRSRSRSPYYSR 214
           + D+R +                              Y R  S    Y + R+ SP Y R
Sbjct: 169 DDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERT-SPDYGR 227

Query: 215 SRSPS---------------RSWSYSPRSR---------SYSPRGKYSRRSPSLSPARSA 250
            RSPS               R  + SPR R         S SP  K  R SP+ SP +  
Sbjct: 228 RRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKE 287

Query: 251 SQRSPSGSPPRSFS-RSRSRSSSPLSSPRSP 280
           S R+  G        R RSRSS       SP
Sbjct: 288 SPRNGVGEVESPIERRERSRSSPENGQVESP 318


>sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=SPAC328.05 PE=4 SV=3
          Length = 464

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 12/177 (6%)

Query: 3   SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPR--PPGYAFLEFEDYRDAED 60
           ++  R +YVGNL    R  E+++   + G +++ ++   P     G A +E+    +A  
Sbjct: 73  TQQERRVYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEART 132

Query: 61  AIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
           AI+      F G   R+      R  ++     S   S  S G     D ++ V  LP +
Sbjct: 133 AIKTLSNQKFMG---RLVYIREDREQNARFGSSSVSPSASSNGKDSEPDRQLFVGNLPYN 189

Query: 121 ASWQDLKDHMRRAG-----DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 172
             WQDLKD  R+AG     D+  +Q  R RG   GIV  +S  +  +AI+ L  ++F
Sbjct: 190 VRWQDLKDLFRQAGSVIRADIQMNQEGRSRG--IGIVVMSSMKEAMHAIQMLHNTDF 244



 Score = 48.5 bits (114), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 5   SSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPP--RPPGYAFLEFEDYRDAEDAI 62
            S  +YVGNLP  T  R + DLF   G ++   +   P  R  G+  ++FE+  DA  +I
Sbjct: 308 CSDCIYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSI 367

Query: 63  RGRDGYNFDGYRLRVELAH 81
              +GY + G  L++  AH
Sbjct: 368 EKLNGYRYGGRPLQLSYAH 386


>sp|O81126|RZP22_ARATH Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis
          thaliana GN=RSZ22 PE=1 SV=1
          Length = 200

 Score = 62.4 bits (150), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 6/73 (8%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL      RE+ED F  +G +  +   +  RPPGYAFL+FED RDA DAIR  DG 
Sbjct: 4  VYVGNLDPRVTERELEDEFRAFGVVRSV--WVARRPPGYAFLDFEDPRDARDAIRALDGK 61

Query: 69 NFDGYRLRVELAH 81
          N  G+  RVE +H
Sbjct: 62 N--GW--RVEQSH 70


>sp|Q69KL9|RZ21A_ORYSJ Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa
          subsp. japonica GN=RSZ21A PE=2 SV=1
          Length = 185

 Score = 62.0 bits (149), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL      RE+ED F  +G +  +   +  +PPG+AF++F+D RDA+DAIR  DG 
Sbjct: 4  VYVGNLDPRVTARELEDEFRVFGVLRSV--WVARKPPGFAFIDFDDRRDAQDAIRDIDGK 61

Query: 69 NFDGYRLRVELAHGGRRHSSSMDRYSSYSS 98
          N  G+  RVEL+          DRY S  S
Sbjct: 62 N--GW--RVELSRNASSGRGGRDRYGSSES 87


>sp|Q9SJA6|RZ22A_ARATH Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis
          thaliana GN=RSZ22A PE=1 SV=1
          Length = 196

 Score = 62.0 bits (149), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 6/73 (8%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL      RE+ED F  +G I  +   +  RPPGYAFL+FED RDA DAIR  DG 
Sbjct: 4  VYVGNLDPRVTERELEDEFRSFGVIRSV--WVARRPPGYAFLDFEDSRDARDAIREVDGK 61

Query: 69 NFDGYRLRVELAH 81
          N  G+  RVE +H
Sbjct: 62 N--GW--RVEQSH 70


>sp|Q8WXF0|SRS12_HUMAN Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12
          PE=2 SV=1
          Length = 261

 Score = 61.2 bits (147), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 8  TLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKI---PPRPPGYAFLEFEDYRDAEDAIRG 64
          +L++ N+   TR  ++   F +YGPIVD+ + +     RP G+A+++FED RDAEDA+  
Sbjct: 11 SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYN 70

Query: 65 RDGYNFDGYRLRVELAHGGRRHSSSM 90
           +     G ++ ++ A G R+    M
Sbjct: 71 LNRKWVCGRQIEIQFAQGDRKTPGQM 96


>sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2 SV=2
          Length = 357

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 31/165 (18%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           L++GNLP +   +E+  LF +YG +++ D+        Y F+  ED   AEDAIR    Y
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
              G  + VE                      S+  S+ S  ++ V  +  + + Q+L+ 
Sbjct: 59  KLHGVNINVE---------------------ASKNKSKAST-KLHVGNISPTCTNQELRA 96

Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
                G V    + +D       V     +D   AIR LD +EF+
Sbjct: 97  KFEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137



 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 3   SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
           S++S  L+VGN+      +E+   F +YGP+++ D+        YAF+  E   DA +AI
Sbjct: 74  SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDI-----VKDYAFVHMERAEDAVEAI 128

Query: 63  RGRDGYNFDGYRLRVEL 79
           RG D   F G R+ V+L
Sbjct: 129 RGLDNTEFQGKRMHVQL 145


>sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=1 SV=1
          Length = 357

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 31/165 (18%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           L++GNLP +   +E+  LF +YG +++ D+        Y F+  ED   AEDAIR    Y
Sbjct: 4   LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58

Query: 69  NFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKD 128
              G  + VE                      S+  S+ S  ++ V  +  + + Q+L+ 
Sbjct: 59  KLHGVNINVE---------------------ASKNKSKAST-KLHVGNISPTCTNQELRA 96

Query: 129 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 173
                G V    + +D       V     +D   AIR LD +EF+
Sbjct: 97  KFEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137



 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 3   SRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAI 62
           S++S  L+VGN+      +E+   F +YGP+++ D+        YAF+  E   DA +AI
Sbjct: 74  SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDI-----VKDYAFVHMERAEDAVEAI 128

Query: 63  RGRDGYNFDGYRLRVEL 79
           RG D   F G R+ V+L
Sbjct: 129 RGLDNTEFQGKRMHVQL 145


>sp|Q6K4N0|RSZ21_ORYSJ Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp.
           japonica GN=RSZP21 PE=2 SV=1
          Length = 185

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 14/118 (11%)

Query: 9   LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
           LYVGNL       E+ED F  +G +  +   +  +PPG+AF++F+D RDAEDA+R  DG 
Sbjct: 4   LYVGNLDPRVTSGELEDEFRVFGVLRSV--WVARKPPGFAFIDFDDKRDAEDALRDLDGK 61

Query: 69  NFDGYRLRVEL-----AHGGR-RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSS 120
           N      RVEL     + GGR RH  S      Y  G +   +R    R+   GL S 
Sbjct: 62  NG----WRVELSRNSSSRGGRDRHGGS--EMKCYECGETGHFARECRLRIGPGGLGSG 113


>sp|O81127|RZP21_ARATH Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis
          thaliana GN=RSZ21 PE=1 SV=1
          Length = 187

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 6/73 (8%)

Query: 9  LYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGY 68
          +YVGNL      RE+ED F  +G + ++   +  RPPGYAFLEF+D RDA DAI   D  
Sbjct: 4  VYVGNLDPRVTERELEDEFKAFGVLRNV--WVARRPPGYAFLEFDDERDALDAISALDRK 61

Query: 69 NFDGYRLRVELAH 81
          N  G+  RVEL+H
Sbjct: 62 N--GW--RVELSH 70


>sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis
          thaliana GN=RSP41 PE=1 SV=2
          Length = 356

 Score = 58.2 bits (139), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 7/74 (9%)

Query: 7  RTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD 66
          + ++ GN   D R  ++E LF KYG +  +D+K      G+AF+  ED RDAEDAIR  D
Sbjct: 2  KPVFCGNFEYDARESDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56

Query: 67 GYNF--DGYRLRVE 78
           + +   G RLRVE
Sbjct: 57 RFEYGRTGRRLRVE 70


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.130    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,861,300
Number of Sequences: 539616
Number of extensions: 5246160
Number of successful extensions: 43662
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 1248
Number of HSP's that attempted gapping in prelim test: 23795
Number of HSP's gapped (non-prelim): 8713
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)