Query 022429
Match_columns 297
No_of_seqs 246 out of 528
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 05:21:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwr_A Putative calcium/calmod 100.0 1.2E-27 4.1E-32 201.4 15.2 115 170-284 9-128 (144)
2 3cnx_A Uncharacterized protein 99.9 4.4E-26 1.5E-30 198.3 13.1 124 167-290 10-162 (170)
3 3f7s_A Uncharacterized NTF2-li 99.9 4.7E-21 1.6E-25 157.3 17.4 121 167-289 6-133 (142)
4 2ux0_A Calcium-calmodulin depe 99.8 5.5E-20 1.9E-24 151.0 14.2 123 165-287 9-140 (143)
5 3soy_A NTF2-like superfamily p 99.8 6.9E-20 2.4E-24 153.8 11.0 122 167-289 8-141 (145)
6 3b7c_A Uncharacterized protein 99.8 1.1E-18 3.7E-23 141.0 16.0 115 167-282 3-121 (122)
7 2rcd_A Uncharacterized protein 99.8 1.6E-18 5.6E-23 141.0 14.6 113 170-285 15-128 (129)
8 3bb9_A Putative orphan protein 99.8 1.2E-18 4.3E-23 144.6 11.6 114 166-282 27-148 (148)
9 3h51_A Putative calcium/calmod 99.8 1.6E-17 5.3E-22 139.1 16.2 119 167-288 18-144 (156)
10 3hx8_A MLR2180 protein, putati 99.7 4E-17 1.4E-21 129.6 15.9 115 168-285 5-127 (129)
11 4i4k_A Uncharacterized protein 99.7 5.5E-17 1.9E-21 135.1 14.3 116 166-284 16-140 (143)
12 2owp_A Hypothetical protein BX 99.7 7.4E-17 2.5E-21 133.4 13.4 117 167-286 9-128 (129)
13 2r4i_A Uncharacterized protein 99.7 1.8E-16 6.1E-21 125.4 12.2 112 168-284 5-122 (123)
14 3fsd_A NTF2-like protein of un 99.7 2.4E-16 8.1E-21 129.1 12.2 113 167-284 12-133 (134)
15 3rob_A Uncharacterized conserv 99.7 2.2E-15 7.5E-20 125.9 15.7 114 166-283 14-136 (139)
16 2gxf_A Hypothetical protein YY 99.7 1.3E-15 4.4E-20 125.3 13.4 113 168-282 2-122 (142)
17 2f86_B Hypothetical protein K1 99.6 2.2E-15 7.4E-20 126.8 13.5 115 166-286 9-135 (143)
18 3d9r_A Ketosteroid isomerase-l 99.6 1.3E-14 4.5E-19 116.1 15.2 114 167-283 9-132 (135)
19 3cu3_A Domain of unknown funct 99.6 1.4E-14 4.9E-19 122.8 15.2 118 166-285 13-139 (172)
20 3gzr_A Uncharacterized protein 99.6 2.8E-14 9.7E-19 119.6 16.6 119 167-287 4-133 (146)
21 3ke7_A Putative ketosteroid is 99.6 3.5E-14 1.2E-18 118.7 14.9 110 169-284 17-130 (134)
22 3ksp_A Calcium/calmodulin-depe 99.5 2E-13 6.8E-18 113.5 14.9 114 166-285 6-127 (129)
23 1fs1_A SKP2 F-BOX, cyclin A/CD 99.4 8.5E-14 2.9E-18 97.6 4.0 47 97-143 6-52 (53)
24 2e31_A FBS1, F-box only protei 99.3 1.9E-12 6.6E-17 121.4 5.9 76 93-168 44-121 (297)
25 2ovr_B FBW7, F-BOX/WD repeat p 99.3 5.3E-12 1.8E-16 118.6 8.0 79 93-171 12-99 (445)
26 2chc_A Protein RV3472; hypothe 99.2 2.6E-10 8.8E-15 96.0 15.2 115 166-284 11-132 (170)
27 3b8l_A Uncharacterized protein 99.2 2E-10 6.8E-15 96.0 14.2 120 166-287 25-155 (163)
28 3l2o_B F-box only protein 4; s 99.2 5.2E-12 1.8E-16 118.6 4.0 53 98-150 3-55 (312)
29 2rfr_A Uncharacterized protein 99.2 2.1E-10 7.3E-15 94.4 12.6 122 166-289 16-147 (155)
30 1tp6_A Hypothetical protein PA 99.2 4.8E-10 1.6E-14 91.9 12.9 111 169-282 10-125 (128)
31 3v7d_B Cell division control p 99.1 1.5E-11 5.1E-16 115.4 4.2 57 91-147 6-63 (464)
32 1p22_A F-BOX/WD-repeat protein 99.1 1.2E-11 4.1E-16 116.2 2.2 57 93-149 4-64 (435)
33 2k54_A Protein ATU0742; protei 99.0 2.2E-09 7.5E-14 85.3 11.6 107 170-282 4-112 (123)
34 3a76_A Gamma-hexachlorocyclohe 99.0 3.1E-09 1E-13 90.8 13.0 115 165-281 27-151 (176)
35 2a15_A Hypothetical protein RV 99.0 7.1E-09 2.4E-13 83.7 12.5 120 169-294 7-137 (139)
36 3ef8_A Putative scyalone dehyd 98.9 1.2E-08 4E-13 84.8 12.8 117 165-283 7-132 (150)
37 2rgq_A Domain of unknown funct 98.9 1.2E-07 4.2E-12 77.8 16.1 112 167-281 8-125 (144)
38 1oh0_A Steroid delta-isomerase 98.8 4.1E-08 1.4E-12 77.7 11.3 109 168-282 6-119 (131)
39 1ohp_A Steroid delta-isomerase 98.8 1.3E-07 4.5E-12 73.2 12.5 108 168-282 4-115 (125)
40 1nww_A Limonene-1,2-epoxide hy 98.8 2.3E-07 8E-12 75.5 14.4 110 168-282 21-135 (149)
41 4h3u_A Hypothetical protein; s 98.7 1.5E-07 5E-12 78.3 13.0 103 172-280 28-135 (158)
42 3f14_A Uncharacterized NTF2-li 98.7 1.9E-07 6.5E-12 73.7 12.9 103 172-280 3-108 (112)
43 3ejv_A Uncharacterized protein 98.7 2E-07 6.7E-12 80.5 13.4 117 167-283 24-172 (179)
44 3ebt_A Uncharacterized NTF2-li 98.7 2.6E-07 9E-12 73.4 12.3 105 171-281 5-119 (132)
45 3ff2_A Uncharacterized cystati 98.7 3.5E-07 1.2E-11 72.0 12.9 103 172-279 5-113 (117)
46 3blz_A NTF2-like protein of un 98.6 6.4E-07 2.2E-11 72.3 13.5 113 165-280 8-121 (128)
47 3g8z_A Protein of unknown func 98.6 7.4E-07 2.5E-11 73.6 13.8 118 160-282 11-135 (148)
48 3k0z_A Putative polyketide cyc 98.6 1.9E-06 6.3E-11 72.2 16.3 109 167-281 32-142 (159)
49 3dm8_A Uncharacterized protein 98.6 5.8E-07 2E-11 73.7 12.9 107 169-281 4-121 (143)
50 2bng_A MB2760; epoxide hydrola 98.6 1E-06 3.6E-11 72.1 14.1 106 170-280 16-123 (149)
51 1tuh_A BAL32A, hypothetical pr 98.6 1.5E-06 5.1E-11 71.7 14.3 111 167-282 27-144 (156)
52 3duk_A NTF2-like protein of un 98.6 1.1E-06 3.8E-11 71.5 13.0 113 159-278 2-118 (125)
53 1s5a_A Hypothetical protein YE 98.5 5.2E-07 1.8E-11 73.1 10.6 109 170-282 11-130 (150)
54 2gex_A SNOL; alpha+beta barrel 98.5 2.3E-06 8E-11 70.3 14.6 106 169-281 4-121 (152)
55 3hk4_A MLR7391 protein; NTF2-l 98.5 1.6E-06 5.4E-11 71.8 13.5 114 161-280 12-133 (136)
56 3dmc_A NTF2-like protein; stru 98.5 2.5E-06 8.4E-11 69.8 14.4 110 168-282 11-126 (134)
57 3fh1_A Uncharacterized NTF2-li 98.5 1.7E-06 5.8E-11 69.3 12.8 104 167-280 15-124 (129)
58 3f7x_A Putative polyketide cyc 98.5 6.5E-07 2.2E-11 74.4 10.3 114 161-281 12-139 (151)
59 2gey_A ACLR protein; alpha+bet 98.5 3.9E-06 1.3E-10 69.6 14.7 106 169-282 4-120 (158)
60 3g16_A Uncharacterized protein 98.5 8.8E-07 3E-11 75.6 10.9 107 167-277 8-120 (156)
61 3i0y_A Putative polyketide cyc 98.5 3.8E-06 1.3E-10 67.2 13.9 104 171-281 10-127 (140)
62 4gb5_A Uncharacterized protein 98.5 4.9E-06 1.7E-10 69.0 14.7 119 166-284 8-142 (159)
63 1sjw_A Nogalonic acid methyl e 98.5 2.6E-06 9.1E-11 68.6 12.6 105 171-281 4-121 (144)
64 3h3h_A Uncharacterized snoal-l 98.5 5.6E-07 1.9E-11 71.5 8.4 97 168-273 7-112 (122)
65 3fgy_A Uncharacterized NTF2-li 98.4 1.5E-06 5.3E-11 69.3 10.9 107 169-281 5-119 (135)
66 3fka_A Uncharacterized NTF-2 l 98.4 2.2E-06 7.7E-11 69.2 11.9 106 167-279 7-115 (120)
67 3ec9_A Uncharacterized NTF2-li 98.4 3.1E-06 1.1E-10 68.2 12.5 105 171-281 14-127 (140)
68 2ast_B S-phase kinase-associat 98.4 1.1E-07 3.6E-12 86.5 3.5 50 97-146 6-55 (336)
69 3en8_A Uncharacterized NTF-2 l 98.4 9.1E-06 3.1E-10 65.8 14.5 105 168-281 4-108 (128)
70 3g0k_A Putative membrane prote 98.4 7.4E-06 2.5E-10 68.2 13.3 107 167-282 25-133 (148)
71 2f99_A Aklanonic acid methyl e 98.3 1.1E-05 3.8E-10 66.5 13.4 106 170-281 12-130 (153)
72 3f40_A Uncharacterized NTF2-li 98.3 1.2E-05 4E-10 64.1 12.5 98 170-281 7-104 (114)
73 3grd_A Uncharacterized NTF2-su 98.3 9E-07 3.1E-11 70.7 5.8 106 172-281 7-121 (134)
74 3kkg_A Putative snoal-like pol 98.2 9.7E-06 3.3E-10 66.0 11.0 105 171-281 11-129 (146)
75 3ehc_A Snoal-like polyketide c 98.2 2.1E-05 7E-10 62.6 12.4 103 170-282 4-117 (128)
76 3f8h_A Putative polyketide cyc 98.2 1.6E-05 5.3E-10 66.0 11.0 103 172-281 21-137 (150)
77 1z1s_A Hypothetical protein PA 98.1 5.3E-06 1.8E-10 69.3 7.7 107 169-282 23-140 (163)
78 3mso_A Steroid delta-isomerase 98.1 2.1E-05 7E-10 65.2 10.7 99 169-273 9-109 (143)
79 3f9s_A Putative polyketide cyc 98.0 6.9E-05 2.3E-09 60.7 12.4 107 170-281 7-128 (146)
80 3er7_A Uncharacterized NTF2-li 98.0 9E-06 3.1E-10 67.1 6.0 116 172-294 5-129 (131)
81 3rga_A Epoxide hydrolase; NTF2 98.0 3.5E-05 1.2E-09 70.9 10.6 109 168-282 5-121 (283)
82 3rga_A Epoxide hydrolase; NTF2 98.0 6.5E-05 2.2E-09 69.1 12.3 112 165-282 134-270 (283)
83 2p1m_B Transport inhibitor res 97.8 4.3E-06 1.5E-10 81.5 2.1 45 97-143 3-48 (594)
84 3soa_A Calcium/calmodulin-depe 97.8 0.00021 7.3E-09 69.1 13.3 116 167-284 316-442 (444)
85 3f8x_A Putative delta-5-3-keto 97.8 0.00025 8.7E-09 59.4 12.0 96 169-272 20-117 (148)
86 3flj_A Uncharacterized protein 97.7 0.00013 4.6E-09 62.0 9.5 95 171-273 20-116 (155)
87 3dxo_A Uncharacterized snoal-l 97.7 0.00038 1.3E-08 55.4 10.8 104 170-281 4-114 (121)
88 3lyg_A NTF2-like protein of un 97.6 0.00056 1.9E-08 55.5 10.5 97 172-273 5-103 (120)
89 2b1x_B Naphthalene dioxygenase 97.6 0.0029 9.9E-08 53.3 15.1 115 167-283 11-158 (172)
90 1idp_A Scytalone dehydratase; 97.5 0.00047 1.6E-08 59.5 9.1 116 165-284 13-152 (172)
91 2gbw_B Biphenyl 2,3-dioxygenas 97.4 0.0072 2.5E-07 51.2 15.9 115 167-283 12-160 (174)
92 3eby_A Beta subunit of A putat 97.4 0.0032 1.1E-07 52.8 13.2 115 166-282 11-149 (163)
93 3jum_A Phenazine biosynthesis 97.3 0.0021 7.2E-08 56.2 11.2 105 169-276 41-157 (185)
94 3ogk_B Coronatine-insensitive 97.1 0.00021 7.3E-09 69.5 3.0 33 101-133 14-47 (592)
95 4hfx_A Transcription elongatio 97.1 0.00066 2.2E-08 53.6 5.0 65 102-170 12-76 (97)
96 3hzp_A NTF2-like protein of un 96.8 0.011 3.9E-07 48.6 10.8 108 167-284 4-122 (131)
97 3ff0_A Phenazine biosynthesis 96.5 0.0095 3.3E-07 51.0 8.5 105 172-280 22-139 (163)
98 1uli_B Biphenyl dioxygenase sm 96.4 0.14 4.8E-06 43.9 15.2 116 166-283 21-173 (187)
99 1wql_B Ethylbenzene dioxygenas 96.0 0.28 9.6E-06 41.9 15.5 116 166-283 20-172 (186)
100 3mg1_A OCP, orange carotenoid 96.0 0.023 8E-07 53.2 8.6 113 172-291 195-313 (323)
101 3e99_A Benzoate 1,2-dioxygenas 95.7 0.33 1.1E-05 40.9 14.1 115 167-283 6-150 (164)
102 2jq5_A SEC-C motif; structural 95.5 0.24 8.1E-06 40.7 12.2 92 172-278 29-123 (128)
103 3gzx_B Biphenyl dioxygenase su 94.6 1.4 4.8E-05 37.8 15.2 114 167-282 21-171 (186)
104 3ujm_A Rasputin; NTF2-like fol 94.6 1.2 4.2E-05 35.4 13.8 99 174-279 10-115 (120)
105 2bmo_B Oxygenase-beta NBDO; ni 94.4 0.95 3.2E-05 39.1 13.7 115 167-283 30-180 (194)
106 2i9w_A Hypothetical protein; c 92.6 0.68 2.3E-05 40.3 9.5 93 171-278 53-155 (184)
107 1gy6_A Nuclear transport facto 90.7 5 0.00017 32.1 12.3 100 172-279 12-117 (127)
108 1jkg_A P15; NTF2-like domain, 90.0 6.7 0.00023 31.8 15.0 101 169-279 15-131 (140)
109 1zo2_A NTF2, nuclear transport 89.8 6.6 0.00023 31.5 13.5 101 172-279 16-122 (129)
110 3nv0_B NTF2-related export pro 89.5 8.3 0.00028 32.1 14.4 98 172-279 38-148 (154)
111 1gy7_A Nuclear transport facto 88.9 7.6 0.00026 30.9 12.8 101 172-279 10-117 (125)
112 1jkg_B TAP; NTF2-like domain, 85.5 12 0.0004 33.5 12.4 106 171-280 18-164 (250)
113 2qiy_A UBP3-associated protein 84.7 15 0.00052 30.1 12.5 107 172-280 16-143 (154)
114 3k7c_A Putative NTF2-like tran 84.0 15 0.0005 29.4 12.1 95 172-277 10-112 (114)
115 3q90_A RAS GTPase-activating p 82.7 13 0.00046 30.0 10.6 101 173-279 15-130 (140)
116 3gzb_A Putative snoal-like pol 81.1 17 0.00058 30.1 10.4 81 174-257 25-105 (154)
117 3ecf_A NTF2-like protein; stru 79.7 23 0.00077 28.6 13.2 101 167-277 3-105 (130)
118 1vqq_A Saupbp2A, penicillin-bi 70.7 18 0.00062 36.5 9.7 95 173-277 6-104 (646)
119 2imj_A Hypothetical protein DU 64.4 64 0.0022 27.2 10.6 106 168-283 20-128 (166)
120 2qgu_A Probable signal peptide 39.5 64 0.0022 27.8 6.6 23 257-279 144-166 (211)
121 1of5_A MRNA export factor MEX6 33.7 2.4E+02 0.0082 24.6 10.2 27 171-198 14-40 (221)
122 1gp8_A Protein (scaffolding pr 26.0 64 0.0022 21.0 3.1 27 167-193 6-32 (40)
No 1
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=99.95 E-value=1.2e-27 Score=201.36 Aligned_cols=115 Identities=26% Similarity=0.432 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
.+.+++++||+||++||+++|+++|++|+.++|+||+++.+.|+++|+++|+.+|+.+++++++++++++...||+|+++
T Consensus 9 ~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~~~~i~~~~v~v~~~gd~A~v~ 88 (144)
T 3gwr_A 9 TPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFGAAGRFRLQVKAVHEIRQADHVIRI 88 (144)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEEEEEEEEEECSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHcCCCcEEEEEEEEEEEecCCEEEEE
Confidence 47889999999999999999999999998899999999999999999999999998766788999999999999999999
Q ss_pred EEeeeEeC--C---CceEEEEEEEEeCCeEEEEEEecCCC
Q 022429 250 MKTYIDID--T---GPFNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 250 ~~e~v~~~--~---g~lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
+.+++... + ..+++|+||||++|+|||+|||+||.
T Consensus 89 ~~e~~~~~~~~g~~~~~r~T~V~~r~~g~WrivhhH~S~~ 128 (144)
T 3gwr_A 89 VDEFLTIGDETAPRPAILATNVYRREADGWRMVLHHASPL 128 (144)
T ss_dssp EEEEEEETTCSSCCCCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred EEEEEEecCCCCceeeEEEEEEEEEECCEEEEEEEecCCC
Confidence 99999862 2 35899999999999999999999998
No 2
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=99.93 E-value=4.4e-26 Score=198.32 Aligned_cols=124 Identities=27% Similarity=0.448 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCc---------------eeeecCCCCCCCCHHHHHHHHHHHhccCCCce
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADY---------------VKCIHASGELFSGYNSVIQSWQIAFNWEQGVD 231 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~---------------V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~ 231 (297)
...+|++++++||+||++||+++|+++|++++. ++|+||+++.+.|+++|+++|+.+|.+.+.+.
T Consensus 10 d~~~I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~~~~f~~~~~~~ 89 (170)
T 3cnx_A 10 DVEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEYIQ 89 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCCCccccCHHHHHHHHHHHHccCCeeE
Confidence 457899999999999999999999999999976 79999999899999999999999998775678
Q ss_pred eEEEEeEEEEeCCEEEEEEEeeeEe--CC-------Cc-----eEEEEEEEEeCCeEEEEEEecCCCCCCCcc
Q 022429 232 FQVQDVRARVLTDIAWVTMKTYIDI--DT-------GP-----FNMTNVFEFHNGQWYMVHHHSSVMLVDGEV 290 (297)
Q Consensus 232 vei~dl~V~v~gDvAvv~~~e~v~~--~~-------g~-----lraT~VfrR~dG~WrlvhhHaSp~~~~~~~ 290 (297)
+++.+++|.+.||+|++++.+++.. .+ ++ +|+|+||||++|+|||+|||+||+..+.+.
T Consensus 90 ~~~~dv~v~~~gD~A~v~~~~~~~~~~~~~~g~~~~g~~~~~~~raT~Vfrr~~ggWriv~hH~Sp~~~~~~~ 162 (170)
T 3cnx_A 90 FFLTDVHVSVTGDTALVTCTENILSGGPPPDDSDELGPLVGQLVVATNVFRRTPDGWKLWSHHASPVLAETGA 162 (170)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEC---------CCCEEEEEEEEEEEECCTTCCEEEEEEEEECCC----
T ss_pred EEEEEEEEEEeCCEEEEEEEEEEeccCCccccccccCccccceEEEEEEEEEECCEEEEEEEecCCCCCCCCc
Confidence 8899999999999999999998864 11 21 679999999999999999999998766553
No 3
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=99.87 E-value=4.7e-21 Score=157.27 Aligned_cols=121 Identities=15% Similarity=0.282 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC-CCCCCHHHHHHHHHHHhccCC-CceeEEEEeEEEEeCC
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG-ELFSGYNSVIQSWQIAFNWEQ-GVDFQVQDVRARVLTD 244 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg-~~l~Gr~aVr~sW~~if~~~~-~~~vei~dl~V~v~gD 244 (297)
...+|++++++|++|+++||+++++++|++| +++++|++ ..+.|++++++.|+.+|+..+ +..+++.+++|.+.||
T Consensus 6 ~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~D--~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~~v~~~gd 83 (142)
T 3f7s_A 6 AESEIRQLIERWMQAVRDRDIPGIIAPYADD--IVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLTVHAAGD 83 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEEEEEEETT
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC--EEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeeeEEEEcCC
Confidence 5678999999999999999999999999998 45566644 345799999999999997643 5688999999999999
Q ss_pred EEEEEEEeeeEeC--CC---ceEEEEEEEEeCCeEEEEEEecCCCCCCCc
Q 022429 245 IAWVTMKTYIDID--TG---PFNMTNVFEFHNGQWYMVHHHSSVMLVDGE 289 (297)
Q Consensus 245 vAvv~~~e~v~~~--~g---~lraT~VfrR~dG~WrlvhhHaSp~~~~~~ 289 (297)
+|++++..++... ++ ..|+|+||+|++|+|||+|+|.|.|.++..
T Consensus 84 ~A~~~~~~~~~~~~~~g~~~~~r~T~v~~r~~g~W~ivh~H~S~p~~~~~ 133 (142)
T 3f7s_A 84 LALAHWLNRCGPGDDESQCGFMRATVGYRRQGGQWQVIHEHWSAPFDMET 133 (142)
T ss_dssp EEEEEEEEEEEESSCGGGCEEEEEEEEEEEETTEEEEEEEEEECCBCTTT
T ss_pred EEEEEEEEEEeeecCCCcceeeEEEEEEEEeCCEEEEEEEeeccCcCCCC
Confidence 9999999888652 22 479999999999999999999999877753
No 4
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=99.83 E-value=5.5e-20 Score=151.05 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCC-CceeEEEEeEEEEeC
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQ-GVDFQVQDVRARVLT 243 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~-~~~vei~dl~V~v~g 243 (297)
-...++|++++++|++|+++||+++++++|++|...++.+|.|..+.|++++++.|+.+|.... ...+++.+++|.+.|
T Consensus 9 ~~~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~g 88 (143)
T 2ux0_A 9 KVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIG 88 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEec
Confidence 3456789999999999999999999999999885443333446688999999999999986543 567889999999999
Q ss_pred CEEEEEEEeeeEe--C--CC----ceEEEEEEEEeCCeEEEEEEecCCCCCC
Q 022429 244 DIAWVTMKTYIDI--D--TG----PFNMTNVFEFHNGQWYMVHHHSSVMLVD 287 (297)
Q Consensus 244 DvAvv~~~e~v~~--~--~g----~lraT~VfrR~dG~WrlvhhHaSp~~~~ 287 (297)
|.+++.+...+.. + |. ..|.|+||+|.+|+|||+|||.|+++.+
T Consensus 89 d~aav~~~~~~~~~~~~~g~~~~~~~r~T~v~~k~~g~Wkivh~H~S~~~~~ 140 (143)
T 2ux0_A 89 EDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGAPAA 140 (143)
T ss_dssp TTEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEECCC--
T ss_pred CcEEEEEEeEeeeeecCCCCeeeeeEEEEEEEEEECCEEEEEEEeeCCCCCC
Confidence 8655554433332 2 22 2699999999999999999999988643
No 5
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=99.81 E-value=6.9e-20 Score=153.76 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHH-Hhcc-CCCceeEEEEeE-EEEeC
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQI-AFNW-EQGVDFQVQDVR-ARVLT 243 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~-if~~-~~~~~vei~dl~-V~v~g 243 (297)
...+|++++++|++|+.++|+++|+++|++++.++|++|+| .+.|+++|++.|.. .+.. ....++++.+++ |++.|
T Consensus 8 ~~~ei~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g-~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~I~v~g 86 (145)
T 3soy_A 8 VKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRG-HERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYG 86 (145)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTE-EEESHHHHHHHCCCCCCCCTEEEEEEEESSCCEEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCC-cccCHHHHHHHHHHhhhhccccccceEEeeeeEEEEcC
Confidence 45679999999999999999999999999998899999988 46899999999842 1211 112357788889 89999
Q ss_pred CEEEEEEEeeeEe---CCC-----ceEEEEEEEEe-CCeEEEEEEecCCCCCCCc
Q 022429 244 DIAWVTMKTYIDI---DTG-----PFNMTNVFEFH-NGQWYMVHHHSSVMLVDGE 289 (297)
Q Consensus 244 DvAvv~~~e~v~~---~~g-----~lraT~VfrR~-dG~WrlvhhHaSp~~~~~~ 289 (297)
|+|++++..++.. ++| ..|+|+||+|. +|+|||+|+|.|+++..+.
T Consensus 87 d~A~v~~~~~~~~~~~~~G~~~~~~~r~T~V~~r~~~ggWkIvh~H~S~~~~~~~ 141 (145)
T 3soy_A 87 NAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVHYSGPAKTGV 141 (145)
T ss_dssp TEEEEEEEEEEEEEETTTCCEEEEEEEEEEEEEEETTTEEEEEEEEEECCCCCST
T ss_pred CEEEEEEEEEEEEEEcCCCCeeeeEEEEEEEEEEcCCCCEEEEEEecCCCCCCcc
Confidence 9999998876643 233 36999999995 5999999999998876654
No 6
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=99.80 E-value=1.1e-18 Score=141.00 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCC-CceeEEEEeEEE-EeCC
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQ-GVDFQVQDVRAR-VLTD 244 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~-~~~vei~dl~V~-v~gD 244 (297)
..++|++++++|++|++++|+++++++|.+++++++++|++ ...|+++|++.|+..|.... ...++++.++++ +.+|
T Consensus 3 ~~~~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~~-~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~ 81 (122)
T 3b7c_A 3 PTDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGK-FRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSNY 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSSC-EEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCCc-cccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEcCCC
Confidence 35689999999999999999999999997766788999876 79999999999999886431 124566666666 4679
Q ss_pred EEEEEEEeeeEeC-CC-ceEEEEEEEEeCCeEEEEEEecC
Q 022429 245 IAWVTMKTYIDID-TG-PFNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 245 vAvv~~~e~v~~~-~g-~lraT~VfrR~dG~WrlvhhHaS 282 (297)
+|++++...+... +. ..++|+||+|.+|+|||+|+|.|
T Consensus 82 ~a~v~~~~~~~~~~~~~~~r~T~v~~k~~g~W~Iv~~H~S 121 (122)
T 3b7c_A 82 AAMVVGRWDLKRLKDTPTGVFTLLVEKIDDRWVITMDHSS 121 (122)
T ss_dssp EEEEEEEEEEECSSCCCEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEEEEccCCCCCcEEEEEEEEeCCCEEEEEEecC
Confidence 9999988887643 22 25899999999999999999988
No 7
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=99.79 E-value=1.6e-18 Score=140.97 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC-EEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD-IAWV 248 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD-vAvv 248 (297)
+|.++..+|.+|+.++|+++|+++|++|+.++|++ +++.+.|+++|++ |+..|... +..+++.++.+...|+ +|++
T Consensus 15 ei~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~-~~~~~~G~~~i~~-~~~~~~~~-~~~~~~~~~~~~~~~~d~A~~ 91 (129)
T 2rcd_A 15 DVTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYG-AGENLYGIEEIRA-FRLARPSA-GLDRALRNTVITTYGHDMAVA 91 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEE-TTEEEESHHHHHH-HHHHSCCT-TCCCEEEEEEEEEBTTSEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhccCCCCEEEEC-CCCccCCHHHHHH-HHHhcCCC-CCceEEEEEEEEEecCcEEEE
Confidence 34444444449999999999999999999899999 5668899999999 99999754 3567777888886665 8998
Q ss_pred EEEeeeEeCCCceEEEEEEEEeCCeEEEEEEecCCCC
Q 022429 249 TMKTYIDIDTGPFNMTNVFEFHNGQWYMVHHHSSVML 285 (297)
Q Consensus 249 ~~~e~v~~~~g~lraT~VfrR~dG~WrlvhhHaSp~~ 285 (297)
.........+..-+.|+||+|.+|+|||+|||.||++
T Consensus 92 ~~~~~~~~~~~~g~~t~v~~r~~~gWrIv~~H~S~~~ 128 (129)
T 2rcd_A 92 STEFTRTGSTKIGRQMQTWVKMPEGWRIVAAHVSLMS 128 (129)
T ss_dssp EEEEECSSCCSCEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEEEEEcCCCCceeEEEEEEECCCcEEEEEEecCCCC
Confidence 7766553222335789999999999999999999864
No 8
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=99.78 E-value=1.2e-18 Score=144.64 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHH-HHHHHhccCCCceeEEEEeEEEEeCC
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQ-SWQIAFNWEQGVDFQVQDVRARVLTD 244 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~-sW~~if~~~~~~~vei~dl~V~v~gD 244 (297)
...++|++++++|++|+++||+++++++|++| .++++|++. ..|++++++ .|...|.......+++.+++|.+.||
T Consensus 27 ~~~~~i~~~~~~~~~A~~~~D~~~l~~l~a~D--a~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~gd 103 (148)
T 3bb9_A 27 GVDSAAGNVVKQFHAALQMGNEAIVRQSLAAN--VQIYEGGKV-ERSLTEYANHHMLADMAYLKGLTITPKEHQITITGD 103 (148)
T ss_dssp STTSHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEETTEE-ECSHHHHHHTHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred CcHHHHHHHHHHHHHHHHhCCHHHHHHhhCCC--eEEEeCCCc-cCCHHHHHHHhHHHHHHhccCceEEeeeEEEEEcCC
Confidence 33578999999999999999999999999988 455677765 889999999 99988864334688899999999999
Q ss_pred EEEEEEEeeeEe--CCC----ceEEEEEE-EEeCCeEEEEEEecC
Q 022429 245 IAWVTMKTYIDI--DTG----PFNMTNVF-EFHNGQWYMVHHHSS 282 (297)
Q Consensus 245 vAvv~~~e~v~~--~~g----~lraT~Vf-rR~dG~WrlvhhHaS 282 (297)
+|++.+...+.. +|. ..|.|+|| +|++|+|||+|+|.|
T Consensus 104 ~A~~~~~~~~~~~~~G~~~~~~~r~T~v~~~k~~g~WkIvh~H~S 148 (148)
T 3bb9_A 104 IAISTSISHAQGEYKGKSIDSMTMETLVLIKQADGRWKITHVHWS 148 (148)
T ss_dssp EEEEEEEEEEEECCC--CEEEEEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEEEEEEEEeeeeCCcccccceEEEEEEeEEcCCcEEEEEEEeC
Confidence 999999988764 222 36899999 999999999999987
No 9
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=99.76 E-value=1.6e-17 Score=139.14 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
...+|++++++|++|++++|+++++++|++|..+ +.| ++..+.|+++|++.|+..+...+...++++++++ +.||+
T Consensus 18 d~~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~--~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i~~-~~gd~ 94 (156)
T 3h51_A 18 EAREVAALFDTWNAALATGNPHKVADLYAPDGVL--LPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRL-LDDDS 94 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEE--ECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEEEE-CSSSE
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEE--ecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEEEE-ecCCe
Confidence 5678999999999999999999999999999533 443 3557899999999999999765433455555443 35999
Q ss_pred EEEEEEeeeEe--CCC-----ceEEEEEEEEeCCeEEEEEEecCCCCCCC
Q 022429 246 AWVTMKTYIDI--DTG-----PFNMTNVFEFHNGQWYMVHHHSSVMLVDG 288 (297)
Q Consensus 246 Avv~~~e~v~~--~~g-----~lraT~VfrR~dG~WrlvhhHaSp~~~~~ 288 (297)
|++++..++.. .+| ..++|.||+|++|+|||+|||.|+++...
T Consensus 95 A~~~~~~~~~~~~~~G~~~~~~~r~t~v~~r~dG~WkIv~~H~S~~p~~~ 144 (156)
T 3h51_A 95 AVDAGVYTFTLTDKNGKKSDVQARYTFVYEKRDGKWLIINHHSSAMPEVD 144 (156)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEECSCCC
T ss_pred EEEEEEEEEEEEcCCCCeEEEEeEEEEEEEEECCEEEEEEEeecCCCccc
Confidence 99999987764 233 25899999999999999999999875443
No 10
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=99.75 E-value=4e-17 Score=129.64 Aligned_cols=115 Identities=11% Similarity=0.191 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
..+|++++++|++|++++|+++++++|++|. +.++|++..+.|+++|++.|+..+..+ ...++++.+++.+.||+|+
T Consensus 5 ~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da--~~~~~~~~~~~G~~~i~~~~~~~~~~~-~~~~~~~~~~v~~~gd~A~ 81 (129)
T 3hx8_A 5 KEAIEAANADFVKAYNSKDAAGVASKYMDDA--AAFPPDMARVDGRQNIQKLWQGAMDMG-ISELKLTTLDVQESGDFAF 81 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEECTTSCCEESHHHHHHHHHHHHHTT-CEEEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhCCCe--EEeCCCCCcccCHHHHHHHHHHHHhCC-CceEEEEEEEEEcCCCEEE
Confidence 5689999999999999999999999999995 336777778899999999999998753 3567888888999999999
Q ss_pred EEEEeeeEe--CCC-----ceEEEEEEEEe-CCeEEEEEEecCCCC
Q 022429 248 VTMKTYIDI--DTG-----PFNMTNVFEFH-NGQWYMVHHHSSVML 285 (297)
Q Consensus 248 v~~~e~v~~--~~g-----~lraT~VfrR~-dG~WrlvhhHaSp~~ 285 (297)
+.+..++.. .+| ..++|.||+|+ ||+|+|+++|.++.+
T Consensus 82 ~~~~~~~~~~~~~G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~~~~ 127 (129)
T 3hx8_A 82 ESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDP 127 (129)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEEEEeeCCCCCeeeeeEEEEEEEEECCCCcEEEEEeeccccc
Confidence 999888764 233 25899999999 999999999998753
No 11
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=99.73 E-value=5.5e-17 Score=135.06 Aligned_cols=116 Identities=17% Similarity=0.170 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC-CCceeEEEEeEEE-EeC
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE-QGVDFQVQDVRAR-VLT 243 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~-~~~~vei~dl~V~-v~g 243 (297)
....+|++++++|++|++++|+++++++|++|..+ ++|| ..+.|+++|++.|+.+|... ++..++++.+.++ +++
T Consensus 16 ~d~~~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~--~~~g-~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 92 (143)
T 4i4k_A 16 AALAAVAALPARIVAAWADHDADRFADVFAEDGTM--ILPG-LFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLLGD 92 (143)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCHHHHHTTEEEEEEE--EETT-EEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEET
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHhhcCceE--EeCC-CeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEcCC
Confidence 45678999999999999999999999999999655 3565 57899999999999999654 3445677777777 588
Q ss_pred CEEEEEEEeeeEeCC-------CceEEEEEEEEeCCeEEEEEEecCCC
Q 022429 244 DIAWVTMKTYIDIDT-------GPFNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 244 DvAvv~~~e~v~~~~-------g~lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
|+|++.....+..+| ..++.|+||+|++|+|||++||.||.
T Consensus 93 d~A~v~~~~~~~~~g~~~~~~~~~~~~T~v~~r~~g~WrI~~~h~S~v 140 (143)
T 4i4k_A 93 GIALLITEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAAYQNSPR 140 (143)
T ss_dssp TEEEEEEEEEEECTTCSSCCGGGEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEeccceecCCCCCCCcccceEEEEEEEEECCcEEEEEecCCcc
Confidence 999998654443222 22689999999999999999999987
No 12
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=99.72 E-value=7.4e-17 Score=133.38 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC-CE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT-DI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g-Dv 245 (297)
...+|.++..+|++|+.++|++.|+++|++|+.++|+ |+|+.+.|+++|++ |+..+... ....++.+..|+..| |+
T Consensus 9 ~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~-~~g~~l~G~~~I~a-~r~~~~~~-~~~~~~~~~~i~~~g~d~ 85 (129)
T 2owp_A 9 IVAQVQAAFVEYERALVENDIEAMNALFWHTPETVRY-GIAEVQHGGEAIRA-WRERCEPV-PKSRKLHRTVVTTFGTDF 85 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEE-CSSCEEESHHHHHH-HHHHSCCC-CTTCEEEEEEEEEETTTE
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHhhccCCCcEEEe-CCCCccCCHHHHHH-HHHhcCCC-CCceeecccEEEEecCCE
Confidence 3467888999999999999999999999999988888 45778999999999 88777543 234567777888888 69
Q ss_pred EEEEEEeeeEeCCCceEEEEEEEEeC--CeEEEEEEecCCCCC
Q 022429 246 AWVTMKTYIDIDTGPFNMTNVFEFHN--GQWYMVHHHSSVMLV 286 (297)
Q Consensus 246 Avv~~~e~v~~~~g~lraT~VfrR~d--G~WrlvhhHaSp~~~ 286 (297)
|++.........+...+.|++|+|.+ ++|||+++|.|++.+
T Consensus 86 A~~~~~~~~~~~~~~gr~t~vw~r~~~~~gWrIv~~H~S~~~~ 128 (129)
T 2owp_A 86 ATVSTEFTSDATPLLGRQMQTWARLSPADGWKIVAAHVSLIAM 128 (129)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEECSTTTCEEEEEEEEEEECC
T ss_pred EEEEEEEEECCCCcceEEEEEEEECCCCCCEEEEEeeecCCCC
Confidence 99876544321111458999999999 999999999999754
No 13
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=99.69 E-value=1.8e-16 Score=125.38 Aligned_cols=112 Identities=13% Similarity=0.241 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
.++|.+++++|++|+.++|++.++++|++| ++++||+|. ..|++++.+.|+.-. .....+++.+++|++.||.|+
T Consensus 5 ~~~i~~l~~~~~~A~~~~D~~~l~~l~~~d--~~~~~~~G~-~~~~~~~i~~~~~~~--~~~~~~~~~~~~v~~~g~~a~ 79 (123)
T 2r4i_A 5 RDVILDCEKKLLTAIQNNDVESLEVLLHDD--LLFIIPSGE-TVTKETDIAAYSSGK--IALRAVVPSDYIIRIIHDTVV 79 (123)
T ss_dssp HHHHTHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTSC-EECHHHHHHHHHTTC--EEEEEEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHhhhCcC--eEEECCCCC-CccHHHHHHHHhcCC--eEEEEEeecccEEEEECCEEE
Confidence 367999999999999999999999999987 889999884 557888877765211 123468889999999999887
Q ss_pred EEEEeeeEe--CC----CceEEEEEEEEeCCeEEEEEEecCCC
Q 022429 248 VTMKTYIDI--DT----GPFNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 248 v~~~e~v~~--~~----g~lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
+.+..++.. .+ +..+.|+||+|.+|+|||+|||.||.
T Consensus 80 ~~~~~~~~~~~~g~~~~~~~r~t~vw~r~~g~W~iv~~h~S~~ 122 (123)
T 2r4i_A 80 VSVNIEIKGEYMEHTLDNTFRYLRVWKLFDGNWKVIAGSCTAI 122 (123)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEEEEECCcceeEEEEEEEEEEEeCCeEEEEEEEEEec
Confidence 777544432 22 24688999999999999999999985
No 14
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=99.68 E-value=2.4e-16 Score=129.14 Aligned_cols=113 Identities=12% Similarity=0.211 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC-E
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD-I 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD-v 245 (297)
..++|.+++++|++|+.++|+++++++|++| ++++||+|... +++++.+.++.- ......+++.+.+|++.|| +
T Consensus 12 ~~~~I~~l~~~~~~A~~~~D~~~l~~L~~~d--~~~v~~~G~~~-~~~~~l~~~~~g--~~~~~~~~~~~~~v~~~g~d~ 86 (134)
T 3fsd_A 12 PADDIAFYEERLRAAMLTGDLKGLETLLADD--LAFVDHTGCVK-TKQTHLEPYRAG--LLKLSRLDLSDAVVRAAGEDG 86 (134)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTSCEE-CHHHHHHHHHTT--CEEEEEEEEEEEEEEESSTTE
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHhhcCCC--EEEECCCCcCc-cHHHHHHHHHcC--CceEEEEEEeccEEEEeCCCE
Confidence 3457999999999999999999999999988 78899988654 567666665421 1123468899999999999 9
Q ss_pred EEEEEEeeeEe--CCC----ceEEEEEEEEeCCe--EEEEEEecCCC
Q 022429 246 AWVTMKTYIDI--DTG----PFNMTNVFEFHNGQ--WYMVHHHSSVM 284 (297)
Q Consensus 246 Avv~~~e~v~~--~~g----~lraT~VfrR~dG~--WrlvhhHaSp~ 284 (297)
|++++..++.. +|. .++.|+||+|.+|+ |||++||.||+
T Consensus 87 Avv~~~~~~~~~~~g~~~~~~~~~t~vw~k~~g~~gWriv~~h~S~i 133 (134)
T 3fsd_A 87 RVVVVRAVTAGVYDGEAFTETLRFTRIWRRTQGPAGWKLVAGHCSVI 133 (134)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEeCCcEEEEEEEEEEEEEECCCCccceEeEeEEEec
Confidence 99999988764 332 35899999999999 99999999986
No 15
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=99.66 E-value=2.2e-15 Score=125.90 Aligned_cols=114 Identities=13% Similarity=0.182 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
....+|++++++|++|+++||+++++++|++| ++.++++++.+ |++++++.|...+... ....+++...+.+.||+
T Consensus 14 ~de~aI~~l~~~~~~A~~~gD~~~l~al~a~D--~v~~~~g~~~~-Gr~ai~a~~~~~~~~~-~~~~~~~~~~i~v~GD~ 89 (139)
T 3rob_A 14 ADELAIRTVQYRWLEATRKFDRQVLSSLMTDD--VVFLTPGRLPF-GKEEFLAACEQNDQRV-IIEASATFEEIVIVEPM 89 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEECTTSCCB-CHHHHHHHHHHHHHHE-EEEEEEEEEEEEEETTE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHccCc--EEEECCCCCcc-CHHHHHHHHHHHHHhc-CCCCceEEEEEEEcCCe
Confidence 45678999999999999999999999999999 45577766554 9999999999887653 23555666667889999
Q ss_pred EEEEEEeeeEe--C-CCc-----eEEEEEEEE-eCCeEEEEEEecCC
Q 022429 246 AWVTMKTYIDI--D-TGP-----FNMTNVFEF-HNGQWYMVHHHSSV 283 (297)
Q Consensus 246 Avv~~~e~v~~--~-~g~-----lraT~VfrR-~dG~WrlvhhHaSp 283 (297)
|++++..++.. . +|. .+++.|||| .||+|+|+|.+.-.
T Consensus 90 A~~~~~~~~~~t~~~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~~~~ 136 (139)
T 3rob_A 90 AYTRTHLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDANLV 136 (139)
T ss_dssp EEEEEEEEEEEEETTSCCCEEEEEEEEEEEEECTTSCEEEEEEEECC
T ss_pred EEEEEEEEEEEecCCCCceeEeeccEEEEEEECCCCcEEEEEEhhhc
Confidence 99999988764 2 332 357889999 89999999998743
No 16
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=99.65 E-value=1.3e-15 Score=125.30 Aligned_cols=113 Identities=14% Similarity=0.197 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC-CCceeEEEEeEEEEeCCEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE-QGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~-~~~~vei~dl~V~v~gDvA 246 (297)
+.+|++++++|++|+++||+++++++|++|. +++..| |..+.|+++|++.|+.+++.. ....+++.++.+.+.||.|
T Consensus 2 ~~~I~~l~~~~~~A~~~~D~d~~~~lfa~Da-v~~~~~-g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A 79 (142)
T 2gxf_A 2 EQQLKDIISACDLAIQNEDFDTLMNYYSEDA-VLVVKP-GMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTV 79 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHTTSEEEEE-EEECSS-SCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEE
T ss_pred cHHHHHHHHHHHHHHHcCCHHHHHHhcCCCE-EEEcCC-CCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEE
Confidence 3579999999999999999999999999985 444566 567999999999999888632 2346777888889999999
Q ss_pred EEEEEeeeEe--CCC----ceEEEEEEEE-eCCeEEEEEEecC
Q 022429 247 WVTMKTYIDI--DTG----PFNMTNVFEF-HNGQWYMVHHHSS 282 (297)
Q Consensus 247 vv~~~e~v~~--~~g----~lraT~VfrR-~dG~WrlvhhHaS 282 (297)
++++.+.+.. +|. ..++|+||+| .||+|||++.|.+
T Consensus 80 ~~~~~~~~~~~~~G~~~~~~g~~t~v~~r~~dG~Wri~~d~~~ 122 (142)
T 2gxf_A 80 LVLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDNSY 122 (142)
T ss_dssp EEEEEEECCC---------EEEEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEEEEEEECCCCCeEeeeEEEEEEEEECCCCCEEEEEECCC
Confidence 9999877653 222 2478999999 6999999999964
No 17
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=99.64 E-value=2.2e-15 Score=126.83 Aligned_cols=115 Identities=18% Similarity=0.313 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC--CCCCCCCHHHHHHHHHHHhcc--CCCceeEEEEeEEEE
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA--SGELFSGYNSVIQSWQIAFNW--EQGVDFQVQDVRARV 241 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP--gg~~l~Gr~aVr~sW~~if~~--~~~~~vei~dl~V~v 241 (297)
...++|+++++++.+|+++||.+++++++++| ++++.| .+..+.|.+.++. +|+. .....+++.+++|.+
T Consensus 9 ~~~~eI~~~~~~~~~Ai~~gD~~~~~~l~~~d--v~~Fd~~~~g~~~~g~~~~r~----~f~~~~~~~~~~~~~~~~V~~ 82 (143)
T 2f86_B 9 AQKQDIVRVTQTLLDAISCKDFETYTRLCDTS--MTCFEPEALGNLIEGIEFHRF----YFDGNRKNQVHTTMLNPNVHI 82 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECGGGTTCCEETTHHHHT----TSSSCSCCSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHhcCCC--EEEEccCcCCccccCHHHHHH----HHhcccCCcceeEEEcceEEE
Confidence 35678999999999999999999999999988 455544 5667889888883 3654 334678999999999
Q ss_pred eC-CEEEEEEEeeeEe---CCC----ceEEEEEEEEeCCeEEEEEEecCCCCC
Q 022429 242 LT-DIAWVTMKTYIDI---DTG----PFNMTNVFEFHNGQWYMVHHHSSVMLV 286 (297)
Q Consensus 242 ~g-DvAvv~~~e~v~~---~~g----~lraT~VfrR~dG~WrlvhhHaSp~~~ 286 (297)
.| |+|++++.-.... +|. ..|.|.||+|.+|+||++|.|.|+++.
T Consensus 83 ~g~d~Av~~y~~~~~~~~~~G~~~~~~~r~T~V~~k~~g~WkivH~H~S~~~~ 135 (143)
T 2f86_B 83 IGEDAACVAYVKLTQFLDRNGEAHTRQSQESRVWSKKQGRWVCVHVHRSTQPS 135 (143)
T ss_dssp ETTTEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEC---
T ss_pred eCCCEEEEEEEeeeeeccCCCCeeeEEEEEEEEEEEeCCcEEEEEEeECCCCC
Confidence 99 9999997654432 232 369999999999999999999998753
No 18
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=99.62 E-value=1.3e-14 Score=116.11 Aligned_cols=114 Identities=13% Similarity=0.162 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEE-eCCE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARV-LTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v-~gDv 245 (297)
...+|++++++|++|+++||+++++++|++| .++.+|+++.+.|+++|++.|+..+... ...+.++..++.+ .||+
T Consensus 9 d~~~i~~~~~~~~~a~~~~D~~~~~~l~a~D--~v~~~~~~~~~~G~~ai~~~~~~~~~~~-~~~~~~~~~~i~~~~gd~ 85 (135)
T 3d9r_A 9 ELAVIEAAAIAYLTAFNRADIPAVIATYTDD--GVLMGPGRPAAVGKDELAEVYLSVFETV-GFDMAYEIKEVVQTSADW 85 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEECTTSCCEESHHHHHHHHHHHHHHE-EEEEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHhcCCC--EEEECCCCCcccCHHHHHHHHHHHHhhc-CCceeEEEEEEEEecCCE
Confidence 4567999999999999999999999999998 4557887777789999999999988532 1234555556666 8999
Q ss_pred EEEEEEeeeEe--C-CCc-----eEEEEEEEEe-CCeEEEEEEecCC
Q 022429 246 AWVTMKTYIDI--D-TGP-----FNMTNVFEFH-NGQWYMVHHHSSV 283 (297)
Q Consensus 246 Avv~~~e~v~~--~-~g~-----lraT~VfrR~-dG~WrlvhhHaSp 283 (297)
|++.+...+.. . +|. .+.|.||+|+ ||+|||+++|.|.
T Consensus 86 a~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s~ 132 (135)
T 3d9r_A 86 AFVRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTSK 132 (135)
T ss_dssp EEEEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeecc
Confidence 99988766542 2 332 4789999998 9999999999874
No 19
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=99.61 E-value=1.4e-14 Score=122.85 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhcc-CCCceeEEEEeEEE-EeC
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNW-EQGVDFQVQDVRAR-VLT 243 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~-~~~~~vei~dl~V~-v~g 243 (297)
....+|++++++|++|++++|+++++++|++|..+ +.+.|..+.|+++|++.|+..|.. .....++++...+. +.+
T Consensus 13 ~d~~aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~--~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (172)
T 3cu3_A 13 ADESAIRAFHRQMIDAWNRGSGEGFAAPFSETADF--ITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNS 90 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEE--ECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCeEE--EeCCCCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEEEeCC
Confidence 35678999999999999999999999999999644 443456889999999999998865 23334555556665 468
Q ss_pred CEEEEEEEeeeEeCC-------CceEEEEEEEEeCCeEEEEEEecCCCC
Q 022429 244 DIAWVTMKTYIDIDT-------GPFNMTNVFEFHNGQWYMVHHHSSVML 285 (297)
Q Consensus 244 DvAvv~~~e~v~~~~-------g~lraT~VfrR~dG~WrlvhhHaSp~~ 285 (297)
|+|++.+...+...+ ...++|.+|+|++|+|||+++|.|+..
T Consensus 91 d~A~v~~~~~~~~~g~~~~~~~~~~~~t~v~~r~dG~WrI~~~~~s~~~ 139 (172)
T 3cu3_A 91 QLALMLVVIRVILPGQTETSASRDSLPLYVVTKGDEGWQIEGLLNTRKL 139 (172)
T ss_dssp TEEEEEEEEEEECTTCSSBCGGGCBCCEEEEEEETTEEEEEEEECCBCC
T ss_pred CEEEEEEEEEEEeCCCCCcCCccceEEEEEEEEeCCeEEEEEEEcCccc
Confidence 999998876554322 126899999999999999999999763
No 20
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=99.60 E-value=2.8e-14 Score=119.56 Aligned_cols=119 Identities=13% Similarity=0.243 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC-CCceeEEEEeEEE-EeCC
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE-QGVDFQVQDVRAR-VLTD 244 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~-~~~~vei~dl~V~-v~gD 244 (297)
...+|+++.++|.+|++++|+++++++|++|. +++...|..+.|+++|++.|+..|... .+..+++....|+ +.+|
T Consensus 4 d~~aI~~l~~~~~~A~~~~D~d~~~~lf~~Da--~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 81 (146)
T 3gzr_A 4 GTDAIQALIQAYFTAWNTNAPERFAEIFWPDG--SWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAPG 81 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGSGGGEEEEE--EEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEETT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHhhccCCe--EEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCCC
Confidence 45789999999999999999999999999995 334333567899999999999888643 2345677788887 5789
Q ss_pred EEEEEEEeeeEe---CCC------ceEEEEEEEEeCCeEEEEEEecCCCCCC
Q 022429 245 IAWVTMKTYIDI---DTG------PFNMTNVFEFHNGQWYMVHHHSSVMLVD 287 (297)
Q Consensus 245 vAvv~~~e~v~~---~~g------~lraT~VfrR~dG~WrlvhhHaSp~~~~ 287 (297)
+|++.+...+.. .+| ..+.|.||+|++|+|||+++|.||+...
T Consensus 82 ~A~v~~~~~l~g~~~~~G~~~~~~~~~~t~v~vr~dg~WrI~a~h~s~v~p~ 133 (146)
T 3gzr_A 82 SALAVVTLIQDAYVTPDGRQMPRAHDRLTLLAVEREGVWRFIHGHNTIVNPD 133 (146)
T ss_dssp EEEEEEEEEECCEECTTCCEECCEEEEEEEEEEEETTEEEEEEEEEEECCTT
T ss_pred EEEEEEEEEecceeCCCCCcCCccCcEEEEEEEEECCEEEEEEEecccCcCC
Confidence 999999877741 232 2478889999999999999999987433
No 21
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=99.58 E-value=3.5e-14 Score=118.65 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC-CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS-GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg-g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
.+|..+++ +++++||+++++++|++| +++..|. +.++.|+++++.-|+.+... ....+++.+++|.+.||+|+
T Consensus 17 ~~i~~~~~---~~L~~gD~~~~~~lyapD--vt~fDp~~~~~~~G~~a~r~yf~~~~~~-~~~~~ei~~p~V~v~gD~A~ 90 (134)
T 3ke7_A 17 EMIISLEK---EALASTDPMAFVELSDTD--VIYFDPSLETKIEGLEQLRTYYKGMQLP-PADHFDMIRPVVQVAQNIAV 90 (134)
T ss_dssp HHHHHHHH---HHHHCSCTTHHHHHEEEE--EEEECTTCSSCEESHHHHHHHHHHHCCC-CCSEEEEEEEEEEEETTEEE
T ss_pred HHHHHHhH---HHHhCCCHHHHHHhcCCC--EEEEcCCCccccCCHHHHHHHHHhcccC-CcceEEEeCCeEEEeCceEE
Confidence 34545554 677999999999999988 4555553 34688999999988874333 33578999999999999999
Q ss_pred EEEEeeeEeCC--CceEEEEEEEEe-CCeEEEEEEecCCC
Q 022429 248 VTMKTYIDIDT--GPFNMTNVFEFH-NGQWYMVHHHSSVM 284 (297)
Q Consensus 248 v~~~e~v~~~~--g~lraT~VfrR~-dG~WrlvhhHaSp~ 284 (297)
.++..+...++ ..+|.|.||||. ||+|+++|+|.|.+
T Consensus 91 ~~y~l~~~~~~~~~~~r~T~V~~r~~dG~W~ivH~H~S~~ 130 (134)
T 3ke7_A 91 LTFNLDSYLSDKVIKWNCTEVYRRNPDNQWKIIQTHWSYV 130 (134)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEECTTSBEEEEEEEEEES
T ss_pred EEEEEEEeeCCCcEEEEEEEEEEEcCCCcEEEEEEeeccc
Confidence 99876654433 257999999999 99999999999985
No 22
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=99.53 E-value=2e-13 Score=113.54 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCC--CceeEEEEeEEEEeC
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQ--GVDFQVQDVRARVLT 243 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~--~~~vei~dl~V~v~g 243 (297)
+...+|+++++++++|+.++|.++|.++.+|| .+.+||.|. ..+++++.++. ...+. ...++.++..|++.|
T Consensus 6 ~~~~~~~~le~~~~~A~~~~D~~~L~~LL~dd--f~~v~~sG~-~~~K~~~L~~~---~~~~~~~~~~~~~~~~~vr~~g 79 (129)
T 3ksp_A 6 AKHLQLQTLLSERHAYLMEGNREAMHQLLSSD--FSFIDGQGR-QFDAETYLDHY---VDPDQIQWSNQISESMVVEVFE 79 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTCC-EECHHHHHHHH---SCTTTEEEEEEEEEEEEEEECS
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHhhcCCC--EEEECCCCC-CcCHHHHHHHh---ccCCCccceeecccceeEEEEC
Confidence 56778999999999999999999999999998 788999995 45688888742 12221 235667888999999
Q ss_pred CEEEEEEEeeeEe--CC----CceEEEEEEEEeCCeEEEEEEecCCCC
Q 022429 244 DIAWVTMKTYIDI--DT----GPFNMTNVFEFHNGQWYMVHHHSSVML 285 (297)
Q Consensus 244 DvAvv~~~e~v~~--~~----g~lraT~VfrR~dG~WrlvhhHaSp~~ 285 (297)
|+|+++++..... +| +.+++|.||+|.+|+|||+.||++|..
T Consensus 80 d~AvVt~~~~~~~~~~g~~~~~~~~~t~VW~~~~g~Wrlva~q~Tp~~ 127 (129)
T 3ksp_A 80 TTALVQEIVEDHFSYGRSMYIGRFRSVSLYHWANEGWKWHFHQLTPLD 127 (129)
T ss_dssp SEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEEEEEEEEecCCeEEeEEEEEEEEEEEeCCeeEEEEEeeEecC
Confidence 9999999877764 33 237899999999999999999999874
No 23
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.42 E-value=8.5e-14 Score=97.61 Aligned_cols=47 Identities=23% Similarity=0.332 Sum_probs=40.4
Q ss_pred cchhhcccHHHHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhh
Q 022429 97 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKAL 143 (297)
Q Consensus 97 ~~~l~~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l 143 (297)
...+..||+||+.+||+||++.||+++++|||+|+++++++.+||++
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 45688999999999999999999999999999999999999999986
No 24
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.29 E-value=1.9e-12 Score=121.39 Aligned_cols=76 Identities=9% Similarity=0.191 Sum_probs=59.7
Q ss_pred cCCccchhhcccHHHHHHHhcCCChhhHh-hhhccChHHHHHcCCchhhhhhhcccccccc-CCcCCCCChhHHHHHH
Q 022429 93 RGSGASMMEQLVPEITTHALSYLDYPSLC-RLSMTNSLMRKAANDDNAWKALYHKDFTLEQ-DSVIPVNGWKAYYAAT 168 (297)
Q Consensus 93 ~~~~~~~l~~LP~Eil~~IlsyLd~~sL~-~~s~vcr~~~~~a~d~~lWr~l~~~~~~~~~-~~~~~~~~WKelY~~t 168 (297)
+.+....+..||+|||++||+||+++||+ ++++|||+|+.+++|+.+||+++.+....+. ....+..+||++|...
T Consensus 44 ~~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~Wk~~y~~~ 121 (297)
T 2e31_A 44 EAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFLS 121 (297)
T ss_dssp ---CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTTCCCC-----CCSCHHHHHHHH
T ss_pred ccccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhccCcccccccCCCCCChhhhhehe
Confidence 34455678899999999999999999999 9999999999999999999999877633211 1222577899999763
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.27 E-value=5.3e-12 Score=118.56 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=64.0
Q ss_pred cCCccchhhcccHHHHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhhhccccccccC---------CcCCCCChhH
Q 022429 93 RGSGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD---------SVIPVNGWKA 163 (297)
Q Consensus 93 ~~~~~~~l~~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l~~~~~~~~~~---------~~~~~~~WKe 163 (297)
+....+++..||+|++++||+|||+.||+++++|||+|+++++|+.+||++|.+....... ......+||.
T Consensus 12 ~~~~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~ 91 (445)
T 2ovr_B 12 PQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKS 91 (445)
T ss_dssp CCCCCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHH
T ss_pred ccccCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHH
Confidence 4456788999999999999999999999999999999999999999999998766433211 0113467999
Q ss_pred HHHHHHHH
Q 022429 164 YYAATRAV 171 (297)
Q Consensus 164 lY~~t~aI 171 (297)
.|.....+
T Consensus 92 ~~~~~~~~ 99 (445)
T 2ovr_B 92 AYIRQHRI 99 (445)
T ss_dssp HHHHHHHH
T ss_pred HHhhhhhh
Confidence 99876554
No 26
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=99.23 E-value=2.6e-10 Score=95.99 Aligned_cols=115 Identities=10% Similarity=0.026 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
....+|+++..+|++++.++|.+.+.++|++|..+ .+|+ ....|+++|++.|+..+.. ......+..+.|.+.||.
T Consensus 11 ~d~~~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~--~~~g-~~~~G~~~i~~~~~~~~~~-~~~~h~~~~~~i~~~gd~ 86 (170)
T 2chc_A 11 IEILRIQALCARYCLTINTQDGEGWAGCFTEDGAF--EFDG-WVIRGRPALREYADAHARV-VRGRHLTTDLLYEVDGDV 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHTTEEEEEEE--EETT-EEEESHHHHHHHHHHHHHH-CCCCEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHhcccCcEEE--EeCC-CCcCCHHHHHHHHHHhhcc-cceEEecCCeEEEEeCCE
Confidence 45678999999999999999999999999999543 5665 4678999999999887765 334566788888889999
Q ss_pred EEEEEEeeeE--eCCC-----ceEEEEEEEEeCCeEEEEEEecCCC
Q 022429 246 AWVTMKTYID--IDTG-----PFNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 246 Avv~~~e~v~--~~~g-----~lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
|.+.+..... ..+| ..+++.+|+|++|+|||+++|.+..
T Consensus 87 A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~dg~Wri~~r~~~~~ 132 (170)
T 2chc_A 87 ATGRSASVVTLATAAGYKILGSGEYQDRLIKQDGQWRIAYRRLRND 132 (170)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEcCCCCEEEEEEEEEEEEEEECCEEEEEEEEEEEe
Confidence 9887765322 2233 2478999999999999999998865
No 27
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=99.22 E-value=2e-10 Score=96.04 Aligned_cols=120 Identities=7% Similarity=-0.027 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHh-CChhhhhhhhccCCceeeecCC-C-CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE-E
Q 022429 166 AATRAVVNVNAEFFNIIRE-RSLPAMSRFWLNADYVKCIHAS-G-ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR-V 241 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~a-gDldam~alWaddd~V~cvhPg-g-~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~-v 241 (297)
....+|+++..+|++++.+ +|.+.+.++|++|..+ ..|+ | ..+.|+++|++.|+..+.........+..+.|. +
T Consensus 25 ~d~~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~--~~~~~g~~~~~G~~~i~~~~~~~~~~~~~~~h~~~~~~I~~~ 102 (163)
T 3b8l_A 25 EDRLAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVF--DLSGIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTGY 102 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEE--ECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEE--EecCCCCCCccCHHHHHHHHHHhhccCCceEEEecCEEEEEe
Confidence 3567899999999999999 9999999999999543 4443 2 268899999999887764332334567788888 8
Q ss_pred eCCEEEEEEEeeeEe--C-CCc----eEEEEEEEEeCCeEEEEEEecCCCCCC
Q 022429 242 LTDIAWVTMKTYIDI--D-TGP----FNMTNVFEFHNGQWYMVHHHSSVMLVD 287 (297)
Q Consensus 242 ~gDvAvv~~~e~v~~--~-~g~----lraT~VfrR~dG~WrlvhhHaSp~~~~ 287 (297)
.||.|.+.+...+.. . ++. .+++.+|+|++|+|||++.|.++....
T Consensus 103 ~gd~A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~dg~WrI~~r~~~~~~~~ 155 (163)
T 3b8l_A 103 EGDTASMRAYVIGMGVGKDGRAVTVNGRYFFEVRRTEKGWKATRYTMDFLMPL 155 (163)
T ss_dssp CSSEEEEEEEEEEEEEETTSCEEEEEEEEEEEEEEETTEEEEEEEEEEESSCC
T ss_pred CCCEEEEEEEEEEEEEcCCCCeEEEEEEEEEEEEEeCCEEEEEEEEEEEEecC
Confidence 899998877655421 2 222 478999999999999999999877553
No 28
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=99.21 E-value=5.2e-12 Score=118.62 Aligned_cols=53 Identities=25% Similarity=0.434 Sum_probs=50.4
Q ss_pred chhhcccHHHHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhhhcccccc
Q 022429 98 SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTL 150 (297)
Q Consensus 98 ~~l~~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l~~~~~~~ 150 (297)
.+++.||.||+++|||||+++|||++++|||+|+.+++|+.|||.++.++++.
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~~ 55 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPS 55 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGGG
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCCC
Confidence 56889999999999999999999999999999999999999999999988774
No 29
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=99.19 E-value=2.1e-10 Score=94.42 Aligned_cols=122 Identities=10% Similarity=0.057 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC---CCceeEEEEeEEEEe
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE---QGVDFQVQDVRARVL 242 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~---~~~~vei~dl~V~v~ 242 (297)
....+|+++..+|.+++.++|.+.+.++|++|.. ..+|++....|+++|++.|+..+... ......+..+.|.+.
T Consensus 16 ~d~~~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~--~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~~~ 93 (155)
T 2rfr_A 16 EDREEIRELIARYGPLADSGDAEALSELWVEDGE--YAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVTVE 93 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHhhcCCceE--EEcCCCccccCHHHHHHHHHhccccccCCCceeEeCCCeEEEEe
Confidence 3567899999999999999999999999999953 45666643389999999887654311 123456778888889
Q ss_pred CCEEEEEEEeeeEe--CCCc-----eEEEEEEEEeCCeEEEEEEecCCCCCCCc
Q 022429 243 TDIAWVTMKTYIDI--DTGP-----FNMTNVFEFHNGQWYMVHHHSSVMLVDGE 289 (297)
Q Consensus 243 gDvAvv~~~e~v~~--~~g~-----lraT~VfrR~dG~WrlvhhHaSp~~~~~~ 289 (297)
||.|.+.+...+.. .++. .+++.+|+|++|+|||++.|.++....++
T Consensus 94 gd~A~~~~~~~~~~~~~~~~~~~~~g~y~d~~~r~~g~Wri~~r~~~~~~~~~~ 147 (155)
T 2rfr_A 94 GDTATARCHSVVFRCVSGTFGSHRVSANRWTFRRTPAGWRAVRRENALLDGSAA 147 (155)
T ss_dssp TTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTEEEEEEEEEEESSSCHH
T ss_pred CCEEEEEEEEEEEEEcCCCceEEEeeeeEEEEEECCCEEEEEEEEEEecCCChh
Confidence 99999887655432 3332 25678999999999999999987654443
No 30
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=99.15 E-value=4.8e-10 Score=91.90 Aligned_cols=111 Identities=11% Similarity=0.072 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHhC-ChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE-EeCCEE
Q 022429 169 RAVVNVNAEFFNIIRER-SLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR-VLTDIA 246 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~ag-Dldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~-v~gDvA 246 (297)
..+.+..++|+++...+ |+++++++|++| .+.++|+| ...|++++++.|+..++..+++.+++.++.+. .++|.+
T Consensus 10 ~~~~~~ie~W~~~~~~~~dl~~l~a~~a~d--~~mv~p~G-~~~g~~~~~~~~~~~~g~~pgl~i~i~~l~~~~~~~d~~ 86 (128)
T 1tp6_A 10 HHAHVAIRDWLAGDSRADALDALMARFAED--FSMVTPHG-VVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGA 86 (128)
T ss_dssp HHHHHHHHHHHHTCCCTTHHHHHHTTEEEE--EEEECTTS-CEEEHHHHHHHHHHHTTCSTTCEEEEEEEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCcHhHHHHHHHhcCCC--EEEECCCC-eECCHHHHHHHHHHhhCCCCCeEEEEEEEEEEeecCCEE
Confidence 34666777777777776 999999999999 55578877 57899999999999998888888998888885 469999
Q ss_pred EEEEEeeeEeCCC--ceEEEEEEEEe-CCeEEEEEEecC
Q 022429 247 WVTMKTYIDIDTG--PFNMTNVFEFH-NGQWYMVHHHSS 282 (297)
Q Consensus 247 vv~~~e~v~~~~g--~lraT~VfrR~-dG~WrlvhhHaS 282 (297)
++.+.+.-..+++ .-++|.||+|. +|+|+-.|-|.+
T Consensus 87 vv~y~~~~~~~~~~~~rrsT~v~~~~~~g~~~W~~lHET 125 (128)
T 1tp6_A 87 TLAYREIQSDAAGRSERLSTVVLHRDDEGRLYWRHLQET 125 (128)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEEEeccCCceeEEEEEEEEEeCCCCCEEEEEEEEE
Confidence 9998866543332 25889999665 886444455544
No 31
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.15 E-value=1.5e-11 Score=115.38 Aligned_cols=57 Identities=16% Similarity=0.263 Sum_probs=50.6
Q ss_pred cccCCccchhhcccHHHHHHHhcCCChhhHhhhhccChHHHHHcCC-chhhhhhhccc
Q 022429 91 AERGSGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAAND-DNAWKALYHKD 147 (297)
Q Consensus 91 ~~~~~~~~~l~~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d-~~lWr~l~~~~ 147 (297)
.+++...+++..||+||+++||||||++||+++++|||+|++++.+ +.|||++|.+.
T Consensus 6 ~~~~~~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~ 63 (464)
T 3v7d_B 6 IKDNLKRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISE 63 (464)
T ss_dssp ---CCCCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHT
T ss_pred cCcccccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcc
Confidence 3466778999999999999999999999999999999999999998 89999998644
No 32
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.12 E-value=1.2e-11 Score=116.24 Aligned_cols=57 Identities=25% Similarity=0.352 Sum_probs=52.4
Q ss_pred cCCccchhhcccHH----HHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhhhccccc
Q 022429 93 RGSGASMMEQLVPE----ITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT 149 (297)
Q Consensus 93 ~~~~~~~l~~LP~E----il~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l~~~~~~ 149 (297)
+....+++..||+| |+++||+|||+.||+++++|||+|+++++|+.|||++|.+.+.
T Consensus 4 ~~~~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~ 64 (435)
T 1p22_A 4 IMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVR 64 (435)
T ss_dssp CCSCCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHT
T ss_pred hhhhcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence 34557889999999 9999999999999999999999999999999999999988764
No 33
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=99.03 E-value=2.2e-09 Score=85.28 Aligned_cols=107 Identities=9% Similarity=0.110 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
...++.++||+|++++|+++++++|++|..+. -+|+++...|++++++.|+..+.. + .++++.+++.+.||.+++.
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~-~~~g~~~~~G~~ai~~~~~~~~~~-~--~~~~~~~~~~~~gd~v~~~ 79 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDCQYY-AFPATLLAGNAAEIRVRHIERFKE-P--DLYGELLTRVIVGNVVIDH 79 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEE-ETTTEEEEESHHHHHHHHHHHTTC-T--TCEEEEEEEEEETTEEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCceEEE-cCCCCcccCCHHHHHHHHHHHcCC-C--CcEEEEEEEEEECCEEEEE
Confidence 45678899999999999999999999995332 245555689999999999998876 4 4555566677889987665
Q ss_pred EEeeeEeCCC--ceEEEEEEEEeCCeEEEEEEecC
Q 022429 250 MKTYIDIDTG--PFNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 250 ~~e~v~~~~g--~lraT~VfrR~dG~WrlvhhHaS 282 (297)
..-....+++ .+....+|+-+|| ||+.+...
T Consensus 80 ~~~~g~~~~~~~~~~~~~vf~v~dG--kI~~~~~~ 112 (123)
T 2k54_A 80 ETVTRNFPEGKGEVDVACIYEVENG--RIAKAWFK 112 (123)
T ss_dssp EEEECCBTTBCCEEEEEEEEEEETT--EEEEEEEE
T ss_pred EEEEeECCCCceEEEEEEEEEEECC--EEEEEEEE
Confidence 5433322333 5888999999998 56666543
No 34
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=99.03 E-value=3.1e-09 Score=90.81 Aligned_cols=115 Identities=10% Similarity=0.160 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHH-HHHhccCCCceeEEEEeEEEEeC
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSW-QIAFNWEQGVDFQVQDVRARVLT 243 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW-~~if~~~~~~~vei~dl~V~v~g 243 (297)
.....+|+++..+|.+++.++|.+.+.++|++|..+ ..|+...+.|++++++.| +..+.........+..+.|.+.|
T Consensus 27 l~d~~~I~~ll~ry~~alD~~d~d~~~~lfteDa~~--~~~~~g~~~G~~~i~~~~~~~~~~~~~~t~H~i~n~~I~~~g 104 (176)
T 3a76_A 27 LASRAAIQDLYSDKLIAVDKRQEGRLASIWWDDAEW--TIEGIGTYKGPEGALDLANNVLWPMFHECIHYGTNLRLEFVS 104 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEE--EETTTEEEEHHHHHHHHHHHTHHHHEEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHhhccCCeEE--EcCCCccccCHHHHHHHHHHhhhcccCceEEecCCeEEEEcC
Confidence 345678999999999999999999999999999533 345433578999999988 65554333345667888888888
Q ss_pred -CEEEEEEEeeeE--e-CCC-----ceEEEEEEEEeCCeEEEEEEec
Q 022429 244 -DIAWVTMKTYID--I-DTG-----PFNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 244 -DvAvv~~~e~v~--~-~~g-----~lraT~VfrR~dG~WrlvhhHa 281 (297)
|.|.+.+...+. . .++ ..+++.+|+|++|+|||.+.+.
T Consensus 105 ~d~A~~~~~~~~~~~~~~~~~~~~~~gry~d~l~r~dg~WrI~~r~~ 151 (176)
T 3a76_A 105 ADKVNGIGDVLLLGNLVEGNQSILIAAVFTDEYERRDGVWKFSKRNA 151 (176)
T ss_dssp SSEEEEEEEEEEEEEETGGGEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEEEEEEEEecCCCceEEEEEEEEEEEEEECCEEEEEEEEE
Confidence 899886533322 2 222 1478999999999999999754
No 35
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=98.97 E-value=7.1e-09 Score=83.68 Aligned_cols=120 Identities=6% Similarity=-0.016 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC-CC-------CCCHHHHHHHHHHHhccCCCceeEEEEeEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG-EL-------FSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR 240 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg-~~-------l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~ 240 (297)
.+++++.++|++|++++|++++.++|++|. +...|.+ .+ +.|+++|++.|+..++.. ..++++.+..+.
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~--v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~-~~~~~~~~~~i~ 83 (139)
T 2a15_A 7 SPALIASQSSWRCVQAHDREGWLALMADDV--VIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN-RLTVTCEETFPS 83 (139)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHTEEEEE--EEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT-TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHhcCCCE--EEECCCCCCccCCCCceeecHHHHHHHHHHhcccc-eeEEeccCceEe
Confidence 467889999999999999999999999994 3344533 23 799999999999988765 455555554555
Q ss_pred EeCCEEEEEEEeeeEeCCC---ceEEEEEEEEeCCeEEEEEEecCCCCCCCcccccc
Q 022429 241 VLTDIAWVTMKTYIDIDTG---PFNMTNVFEFHNGQWYMVHHHSSVMLVDGEVEQQV 294 (297)
Q Consensus 241 v~gDvAvv~~~e~v~~~~g---~lraT~VfrR~dG~WrlvhhHaSp~~~~~~~~~~~ 294 (297)
+.||.+++.+.......+| .++.+.+|+. ++.|||++++... ++....+|+
T Consensus 84 ~~g~~~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~dGkI~~~~~y~--d~~~~~~ql 137 (139)
T 2a15_A 84 SSPDEIAHILVLHSEFDGGFTSEVRGVFTYRV-NKAGLITNMRGYW--NLDMMTFGN 137 (139)
T ss_dssp SSTTEEEEEEEEEEEETTTEEEEEEEEEEEEE-CTTSCEEEEEEEC--CGGGCEEEC
T ss_pred ecCCEEEEEEEEEEEeCCCCEEEEEEEEEEEE-CCCCeEEEeehhc--CHHHHHhhh
Confidence 7899888777654443344 2678888965 4468999887753 345555554
No 36
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=98.94 E-value=1.2e-08 Score=84.76 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC-
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT- 243 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g- 243 (297)
.....+|+++..+|..++.++|.+.+.++|++|..+ .++++..+.|+++|++.|...+.........+..+.|.+.|
T Consensus 7 l~d~~~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~--~~~~~~~~~G~~~i~~~~~~~~~~~~~~~H~~~n~~I~~~gd 84 (150)
T 3ef8_A 7 LVEMRAIERMMFDYSYHLDMNHPEELAALFVEDCEV--SYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICIDFVSE 84 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEE--EEETTEEEESHHHHHHHTTTHHHHEEEEEEEEEEEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHhhccCceEE--EccCCCCCCCHHHHHHHHHHhhcccCceEEecCCEEEEEcCC
Confidence 456788999999999999999999999999999543 33333357899999998766554223345678888898877
Q ss_pred CEEEEEEEeeeE--e-CCCc-----eEEEEEEEEeCCeEEEEEEecCC
Q 022429 244 DIAWVTMKTYID--I-DTGP-----FNMTNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 244 DvAvv~~~e~v~--~-~~g~-----lraT~VfrR~dG~WrlvhhHaSp 283 (297)
|.|.+.+...+. . +++. -+++..|+|++|+|||.+.+..+
T Consensus 85 d~A~~~~~~~~~~~~~~~~~~~~~~gry~d~~~r~dg~Wri~~r~~~~ 132 (150)
T 3ef8_A 85 TEANVRSVVLAIHRYTKERPDGILYGQYFDTVVKVDGQWKFKRRELRT 132 (150)
T ss_dssp TEEEEEEEEEEEEEESSSSCCEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEEEEEEEEEccCCCCeEEEEEEEEEEEEEECCEEEEEEEEEEe
Confidence 588887765542 1 2221 47899999999999999998643
No 37
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=98.86 E-value=1.2e-07 Score=77.77 Aligned_cols=112 Identities=11% Similarity=0.076 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC-CCceeEEEEeEEEEeCCE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE-QGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~-~~~~vei~dl~V~v~gDv 245 (297)
...+|+++..+|..++.++|.+.+.++|++|... ..|.|+ ..|+++|++.++..+... .+....+..+.|.+.||.
T Consensus 8 d~~~I~~l~~rya~~lD~~d~~~~~~lft~Da~~--~~~~g~-~~g~~~i~~~~~~~~~~~~~~t~H~i~n~~i~~~~d~ 84 (144)
T 2rgq_A 8 DKLEIMELAARFEMSLDKEDVENYLATFASDGAL--QGFWGI-AKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGNYDE 84 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEE--EETTEE-EESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHhhccCcEEE--EcCCCC-CCCHHHHHHHHHHHHhhCCCCcEEecCCeEEEEeCCE
Confidence 4578999999999999999999999999999533 445443 489999999887766432 234566888889899998
Q ss_pred EEEEEEeeeEe-CCC----ceEEEEEEEEeCCeEEEEEEec
Q 022429 246 AWVTMKTYIDI-DTG----PFNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 246 Avv~~~e~v~~-~~g----~lraT~VfrR~dG~WrlvhhHa 281 (297)
|.+.+...+.. .+. ..+++.+|+|++|+|||.+.+.
T Consensus 85 a~~~~~~~~~~~~~~~~~~~g~y~d~~~r~dg~Wri~~r~~ 125 (144)
T 2rgq_A 85 ATMESYLTVVNREDLNRAGSAFVKDQVRKINGKWYLILRQI 125 (144)
T ss_dssp EEEEEEEEEEESSSSCEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCeEEEEEEEEEEEEEECCEEEEEEEEE
Confidence 88876655433 221 1378999999999999999987
No 38
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=98.81 E-value=4.1e-08 Score=77.74 Aligned_cols=109 Identities=8% Similarity=0.161 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC-CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS-GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg-g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
..+++++.++|++|+++||++++.++|++|. +...|+ +..+.|+++|++.|+..+...+... ++...+.+.||.+
T Consensus 6 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~--~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~--~~~~~~~~~g~~~ 81 (131)
T 1oh0_A 6 AQEVQGLMARYIELVDVGDIEAIVQMYADDA--TVEDPFGQPPIHGREQIAAFYRQGLGGGKVRA--CLTGPVRASHNGC 81 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEEE--EEESSTTSCCEEHHHHHHHHHHHHHSSSCCEE--EESSCCEECSSSE
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHcCCCE--EEEcCCCCCCcccHHHHHHHHHHHhhccceeE--eecceEEECCCeE
Confidence 4578889999999999999999999999994 445564 3578999999999999887654434 4444566899988
Q ss_pred -EEEEEeeeEeCCCc--eEEEEEEEE-eCCeEEEEEEecC
Q 022429 247 -WVTMKTYIDIDTGP--FNMTNVFEF-HNGQWYMVHHHSS 282 (297)
Q Consensus 247 -vv~~~e~v~~~~g~--lraT~VfrR-~dG~WrlvhhHaS 282 (297)
++.+......+|.. ++.+.+|+. +|| ||+.++..
T Consensus 82 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~dG--kI~~~~~~ 119 (131)
T 1oh0_A 82 GAMPFRVEMVWNGQPCALDVIDVMRFDEHG--RIQTMQAY 119 (131)
T ss_dssp EEEEEEEEEESSSSEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred EEEEEEEEEEeCCcEEEEEEEEEEEECCCC--cEEhHHhh
Confidence 77765444323332 678899999 788 56666543
No 39
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=98.76 E-value=1.3e-07 Score=73.17 Aligned_cols=108 Identities=10% Similarity=0.177 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
..+++++.++|++|++++|++++.++|++|. +...| ++..+.|++++++.|+..+...+ .+++.. .+.+.||.+
T Consensus 4 ~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~--~~~~~~~~~~~~G~~~i~~~~~~~~~~~~--~~~~~~-~~~~~g~~~ 78 (125)
T 1ohp_A 4 PEHMTAVVQRYVAALNAGDLDGIVALFADDA--TVENPVGSEPRSGTAAIREFYANSLKLPL--AVELTQ-EVRAVANEA 78 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEE--EEESSTTSCCEESHHHHHHHHHHHTSSCC--EEEECS-CCEEETTEE
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHcCCCe--EEECCCCCCCccCHHHHHHHHHHhcccCc--eEEEee-eEEEeCCEE
Confidence 4578899999999999999999999999994 33445 45688999999999998887553 455441 466899988
Q ss_pred EEEEEeeeEeCCCc--eEEEEEEEEe-CCeEEEEEEecC
Q 022429 247 WVTMKTYIDIDTGP--FNMTNVFEFH-NGQWYMVHHHSS 282 (297)
Q Consensus 247 vv~~~e~v~~~~g~--lraT~VfrR~-dG~WrlvhhHaS 282 (297)
++.+......+|.. ++.+.+|+.. +| ||+.++..
T Consensus 79 ~~~~~~~~~~~g~~~~~~~~~~~~~~~dG--kI~~~~~~ 115 (125)
T 1ohp_A 79 AFAFIVSFEYQGRKTVVAPIDHFRFNGAG--KVVSMRAL 115 (125)
T ss_dssp EEEEEEEEEETTEEEEECCEEEEEECTTS--CEEEEEEE
T ss_pred EEEEEEEEEecCceEEEEEEEEEEECCCC--cEEEEEEE
Confidence 88766554333433 5678899984 66 56665543
No 40
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=98.75 E-value=2.3e-07 Score=75.52 Aligned_cols=110 Identities=11% Similarity=0.147 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCcee-EEEEeEEEEeCCEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDF-QVQDVRARVLTDIA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~v-ei~dl~V~v~gDvA 246 (297)
....+++.++|++|+++||++++.++|++|... ..|+.+.+.|+++|++.|+..+...+ + +++..++...||.+
T Consensus 21 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~--~~~~~~~~~G~~~i~~~~~~~~~~~~---~~~~~~~~~~~~gd~v 95 (149)
T 1nww_A 21 STPDEKIVLEFMDALTSNDAAKLIEYFAEDTMY--QNMPLPPAYGRDAVEQTLAGLFTVMS---IDAVETFHIGSSNGLV 95 (149)
T ss_dssp CSHHHHHHHHHHHHGGGCCHHHHHTTBCSSCEE--EETTSCCEESHHHHHHHHHHHHHHEE---EEEEEEEEEEEETTEE
T ss_pred CcCHHHHHHHHHHHHhcCCHHHHHHHhCCCEEE--EcCCCCCccCHHHHHHHHHHHHhhCC---cceEEEEEEEecCCEE
Confidence 345678889999999999999999999999543 44555568899999999988886542 4 55566677899988
Q ss_pred EEEEEeeeEe-CCC-c--eEEEEEEEEeCCeEEEEEEecC
Q 022429 247 WVTMKTYIDI-DTG-P--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 247 vv~~~e~v~~-~~g-~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
++........ .+| . ++...+|+.+||.+.-...+..
T Consensus 96 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~dGkI~~~~~~~d 135 (149)
T 1nww_A 96 YTERVDVLRALPTGKSYNLSILGVFQLTEGKITGWRDYFD 135 (149)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEEEEEcCCCCEEEEeeEEEEEEeCCEEEEEehhcC
Confidence 8766655444 333 3 5788899999997665554443
No 41
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=98.74 E-value=1.5e-07 Score=78.32 Aligned_cols=103 Identities=10% Similarity=0.076 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeec-CCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIH-ASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTM 250 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvh-Pgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~ 250 (297)
.++.++|++|++++|++++.++|++|. +... +.+..+.|+++|++.|+.+++..+ .+.++...+.+.||.+++.+
T Consensus 28 ~eiv~~y~~A~n~~D~d~~~~l~a~D~--v~~d~~~g~~~~Greai~~~~~~~~~~~~--d~~~~v~~~~~~gd~v~~~~ 103 (158)
T 4h3u_A 28 PEIVTAWAAAWTGTNPNALGTLFAADG--TYVDHAIGATMTGREQISGWKARTDAMIE--NVHVTITKAYRAGDHVTIEA 103 (158)
T ss_dssp CHHHHHHHHHHHSSCHHHHHTTEEEEE--EEEETTTTEEEESHHHHHHHHHHHHHHEE--EEEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHhcccc--eEeccCCCceEecchhhhhhhhhhhccCC--ccceeEeEEeecCceEEEEE
Confidence 357889999999999999999999994 3333 445678999999998888776543 34455556788999988887
Q ss_pred EeeeEeC-CC-c--eEEEEEEEEeCCeEEEEEEe
Q 022429 251 KTYIDID-TG-P--FNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 251 ~e~v~~~-~g-~--lraT~VfrR~dG~WrlvhhH 280 (297)
....... .| + ++...+|+-+||+ |+.++
T Consensus 104 ~~~gt~~~tG~~~~~~~~~v~~~~dGk--I~~~~ 135 (158)
T 4h3u_A 104 VYGGHIKGAPTPFAVPMATLLRTRGEE--ITSDQ 135 (158)
T ss_dssp EEEEEETTSSSCEEEEEEEEEEEETTE--EEEEE
T ss_pred EEEEEecCccCcceeeeEEEEEEECCE--EEEEE
Confidence 7666543 23 3 5788899999995 44444
No 42
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=98.73 E-value=1.9e-07 Score=73.66 Aligned_cols=103 Identities=9% Similarity=0.048 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTMK 251 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~~ 251 (297)
.+..++||+||++||++++.++.++| ++...|++..+.|++++++.++......++..+++ .++...||.+++.+.
T Consensus 3 ~~~v~~~~~a~~~gD~~~~~~~ladD--v~w~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~i--~~~i~~Gd~Vvv~~~ 78 (112)
T 3f14_A 3 ETTHYSIAQHFSSGDFPAVYACFNDI--IEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTN--DNVIQNENQIVIEGK 78 (112)
T ss_dssp HHHHHHHHHHHHTTCGGGTGGGEEEE--EEEEETTTEEEESHHHHHHHHHHHHHHHHTSEEEE--EEEEECSSEEEEEEE
T ss_pred hHHHHHHHHHHHcCCHHHHHHhcCCc--eEEEEcCCccEecHHHHHHHHHHHHhhcCCcEEEE--EEEEEeCCEEEEEEE
Confidence 45788999999999999999999988 44455667778999999998887775443334444 458889999888887
Q ss_pred eeeEe-CCCc--eEEEEEEEEeCCeEEEEEEe
Q 022429 252 TYIDI-DTGP--FNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 252 e~v~~-~~g~--lraT~VfrR~dG~WrlvhhH 280 (297)
..... +|.. .....|||-+|| ||+...
T Consensus 79 ~~~~~~~g~~~~~~~~~vf~~~dG--kI~e~~ 108 (112)
T 3f14_A 79 CRYFDAEGKEAFVSYCDIYRFEND--TIKTIT 108 (112)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETT--EEEEEE
T ss_pred EEEEeCCCCEEEEEEEEEEEEeCC--EEEEEE
Confidence 66543 3333 578899999998 565543
No 43
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=98.71 E-value=2e-07 Score=80.50 Aligned_cols=117 Identities=11% Similarity=0.126 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeee-cCCC-----CCCCCHHHHHHHHHHHhcc---CCCceeEEEEe
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCI-HASG-----ELFSGYNSVIQSWQIAFNW---EQGVDFQVQDV 237 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cv-hPgg-----~~l~Gr~aVr~sW~~if~~---~~~~~vei~dl 237 (297)
...+|+++..+|..++.++|.+.+.++|++|..+... ..++ ..+.|+++|++.++..+.. .......+..+
T Consensus 24 d~~~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~ 103 (179)
T 3ejv_A 24 DETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAP 103 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCC
Confidence 5678999999999999999999999999999643222 1121 3678999999988887765 23345678888
Q ss_pred EEEEeCCEEEEEEEeeeE--e--C---CC-c-----eE----------EEEEEEEeCCeEEEEEEecCC
Q 022429 238 RARVLTDIAWVTMKTYID--I--D---TG-P-----FN----------MTNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 238 ~V~v~gDvAvv~~~e~v~--~--~---~g-~-----lr----------aT~VfrR~dG~WrlvhhHaSp 283 (297)
.|.+.||.|++++...+. . . |+ + .+ +...|+|++|+|||.+....+
T Consensus 104 ~I~vdgD~A~~~~~~y~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~g~Y~D~~~R~dg~Wri~~r~~~~ 172 (179)
T 3ejv_A 104 IIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVADGWVISAMRIEH 172 (179)
T ss_dssp EEEEETTEEEEEEEEEEEEEEECCCCTTCCCTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEcCCeeEEEEEEEEEEEEeeccCCCCCcceeecccccccccccceEEEEEEEECCeEEEEEEEEEE
Confidence 899999999444443321 1 1 22 1 13 899999999999999987543
No 44
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=98.68 E-value=2.6e-07 Score=73.39 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC-------CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG-------ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT 243 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg-------~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g 243 (297)
-+++.++||+|+++||++++.+++++|. +...|++ ....|++++++.|+.++...+ .+.++..++...|
T Consensus 5 ~~~~v~~~~~a~~~~d~~~~~~l~a~D~--~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 80 (132)
T 3ebt_A 5 NMQTVRESYEAFHRRDLPGVLAALAPDV--RWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIA--EMRLAPDEFIESG 80 (132)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEE--EEEEEEEEEEEET
T ss_pred HHHHHHHHHHHHhccCHHHHHHhcCCCE--EEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCC--ceEEEEeEEEEeC
Confidence 3567889999999999999999999994 3344432 467899999998888776543 3445555677889
Q ss_pred CEEEEEEEeeeEeCCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 244 DIAWVTMKTYIDIDTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 244 DvAvv~~~e~v~~~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
|.+++.+..+....+| . ++...+|+-+|| ||+.+..
T Consensus 81 d~v~v~~~~~~~~~~G~~~~~~~~~v~~~~dG--kI~~~~~ 119 (132)
T 3ebt_A 81 ERIVVLGTRRVTAVNGRSATLKFVHVWRFENG--RAVTFED 119 (132)
T ss_dssp TEEEEEEEEEEEETTSCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred CEEEEEEEEEEEeCCCCEEeeeEEEEEEEECC--EEEEEEE
Confidence 9887777655443334 3 578889999998 5656554
No 45
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.68 E-value=3.5e-07 Score=72.01 Aligned_cols=103 Identities=9% Similarity=0.096 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTMK 251 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~~ 251 (297)
.++.++|++|++++|++++.++|++|. +..-.|++....|++++++.|+..++..+. ...+..++...||.++++..
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~-v~h~~~~~~~~~G~~~~~~~~~~~~~~~p~--~~~~i~~~~~~Gd~V~~~~~ 81 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDDA-CEANYRGDVVREGKEGTRSGLAAAFARWPQ--NHAEIKDAQQVGTYVLMREH 81 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE-EEEETTSCEEECHHHHHHHHHHHHHHHCTT--CEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCcE-EEEeCCCCccccCHHHHHHHHHHHHhhCCC--ceEEEEEEEEECCEEEEEEE
Confidence 467889999999999999999999883 322233445688999999999988876444 44555668899998777654
Q ss_pred eeeEe--CC----CceEEEEEEEEeCCeEEEEEE
Q 022429 252 TYIDI--DT----GPFNMTNVFEFHNGQWYMVHH 279 (297)
Q Consensus 252 e~v~~--~~----g~lraT~VfrR~dG~Wrlvhh 279 (297)
-.... +| ..+.+..+||-+|| ||+.|
T Consensus 82 ~~~~~~~~G~~~~~~~~~~~ifr~~dG--kI~e~ 113 (117)
T 3ff2_A 82 VTRGPATDGSPLVEPFDVVAVYSFEGD--KCSRV 113 (117)
T ss_dssp EECCSCSSSCCCCCCEEEEEEEEEETT--EEEEE
T ss_pred EEecCCCCCCcccccEEEEEEEEEECC--EEEEE
Confidence 43321 13 24688999999998 45443
No 46
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=98.63 E-value=6.4e-07 Score=72.34 Aligned_cols=113 Identities=12% Similarity=0.072 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCC-CCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGE-LFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT 243 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~-~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g 243 (297)
-....+|+++..+|.+++.++|.+.|.+++.+|.......++|. .....++..+.....|...+.... +...|.+.|
T Consensus 8 ~~d~~aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~i~i~g 85 (128)
T 3blz_A 8 VQEYHAIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAKA--AIARIDIVG 85 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHHTCCCCTTCEE--EEEEEEEET
T ss_pred ccHHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHHhcCCCCccccC--eEEEEEEEC
Confidence 34567899999999999999999999999999976654432332 112233333332222211222222 246688889
Q ss_pred CEEEEEEEeeeEeCCCceEEEEEEEEeCCeEEEEEEe
Q 022429 244 DIAWVTMKTYIDIDTGPFNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 244 DvAvv~~~e~v~~~~g~lraT~VfrR~dG~WrlvhhH 280 (297)
|+|.+..... ...++.+.-...|+|++|+|||++.-
T Consensus 86 d~A~a~~~~~-~~~~~~~~d~~~l~k~dg~WkI~~~~ 121 (128)
T 3blz_A 86 TAASARIDTD-DISGFRFTDFFNLLKVEGKWTVVSKI 121 (128)
T ss_dssp TEEEEEEEEE-EETTEEEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEEE-EcCCCceEEeEEEEEECCEEEEEEEE
Confidence 9999866642 12233332233688999999998753
No 47
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=98.62 E-value=7.4e-07 Score=73.60 Aligned_cols=118 Identities=8% Similarity=0.036 Sum_probs=80.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCC----CCCCHHHHHHHHHHHhccCCCceeEEE
Q 022429 160 GWKAYYAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGE----LFSGYNSVIQSWQIAFNWEQGVDFQVQ 235 (297)
Q Consensus 160 ~WKelY~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~----~l~Gr~aVr~sW~~if~~~~~~~vei~ 235 (297)
+=..+|..+..-+++.++||+|+++||++++.+++++|. +...|++. ...|++++++.|+.++...+ ..++++
T Consensus 11 ~~~~~~~~~~~n~~~v~~~~~a~~~gD~~~l~~l~a~D~--v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~-~~~~~~ 87 (148)
T 3g8z_A 11 HHENLYFQGMNTIDIAKSYITAIQTGDHATLGSIISPDV--IWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSN-GTFAIS 87 (148)
T ss_dssp ---------CCHHHHHHHHHHHHHHTCHHHHHHHEEEEE--EEEECSSSTTCEEEESHHHHHHHHHHHHHHTT-TCCEEE
T ss_pred cccccccCCcchHHHHHHHHHHHhcCCHHHHHHHcCCCE--EEEcCCCCCCCceEcCHHHHHHHHHHHHHhcC-CceEEE
Confidence 345678888888999999999999999999999999994 34455543 36899999998888776543 235555
Q ss_pred E-eEEEEeCCEEEEEEEeeeEeCCCc--eEEEEEEEEeCCeEEEEEEecC
Q 022429 236 D-VRARVLTDIAWVTMKTYIDIDTGP--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 236 d-l~V~v~gDvAvv~~~e~v~~~~g~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
. ..+.+.||.+++.+.......|.. ++...+|+-+|| ||+.+...
T Consensus 88 ~i~~~~~~gd~v~v~~~~~~~~~G~~~~~~~~~v~~~~dG--kI~e~~~y 135 (148)
T 3g8z_A 88 RADDYMASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDG--KIVEVRLF 135 (148)
T ss_dssp EEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEEETT--EEEEEEEE
T ss_pred ecceEEecCCEEEEEEEEEEEeCCcEEEeeEEEEEEEECC--EEEEEEEe
Confidence 4 457789998877766554433433 468899999998 56666543
No 48
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=98.61 E-value=1.9e-06 Score=72.21 Aligned_cols=109 Identities=7% Similarity=0.013 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
...+-.++.++||+++++||++++.++|++| ++...|......|++++++.|+.+++..+...+++ .++...||.+
T Consensus 32 ~~~~n~~~v~~~~~a~~~~d~~~l~~~~a~D--~v~~~p~~g~~~G~e~~~~~~~~~~~~~pd~~~~i--~~~~~~gd~v 107 (159)
T 3k0z_A 32 EATEMVHAAQRFYAFWDTGKEELIPQTVTEN--FFDHTLPKGRPQGTEGLKFAAQNFRKIVPNIHCEI--EDLLVVGDKV 107 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGHHHHEEEE--EEESSCCTTCCSSHHHHHHHHHHHHTTCCSEEEEE--EEEEEETTEE
T ss_pred hhHHHHHHHHHHHHHHhcCCHHHHHHHcCCC--eEEecCCCCCCCCHHHHHHHHHHHHHhCCCcEEEE--EEEEEECCEE
Confidence 4455678889999999999999999999998 33344543478999999999988887655545544 4577899988
Q ss_pred EEEEEeeeEeCCCc--eEEEEEEEEeCCeEEEEEEec
Q 022429 247 WVTMKTYIDIDTGP--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 247 vv~~~e~v~~~~g~--lraT~VfrR~dG~WrlvhhHa 281 (297)
++.+..+....|.. ++...+||-+|| ||+.+..
T Consensus 108 ~~~~~~~gt~~G~~v~~~~~~i~r~~dG--kI~e~~~ 142 (159)
T 3k0z_A 108 TARLSFTGTHNDKKIDFFAIDILHVKDG--KITEDWH 142 (159)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEEECCeEEEEEEEEEEEEECC--EEEEEEE
Confidence 88776655434433 567889999988 5666654
No 49
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=98.61 E-value=5.8e-07 Score=73.68 Aligned_cols=107 Identities=10% Similarity=0.085 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC-------CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG-------ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARV 241 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg-------~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v 241 (297)
....++.++||+|+++||++++.+++++|... ..|+. ....|++++++.|+.+.+.-+. ..++..++..
T Consensus 4 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~--~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~--~~~~~~~~~~ 79 (143)
T 3dm8_A 4 HSLWRFSRALHRALNDRQTEELATIIDDNIDW--AIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRI--YRYHRESVML 79 (143)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEE--EEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEE--EEEEEEEEEE
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHhcCCCeEE--EecCCCCcCCCCccccCHHHHHHHHHHHHHhcCc--ceEEEEEEEE
Confidence 35678899999999999999999999999533 22321 2478999999999877765332 3344445678
Q ss_pred eCCEEEEEEEeeeEe-CCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 242 LTDIAWVTMKTYIDI-DTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 242 ~gDvAvv~~~e~v~~-~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
.||.+++.+...... .+| + +....+|+-+|| ||+.++.
T Consensus 80 ~gd~v~v~~~~~~~~~~tG~~~~~~~~~~~~v~dG--kI~~~r~ 121 (143)
T 3dm8_A 80 GIDSAASMVRYSLTAAGTNRPISVRMALFTQFQNG--RLTNLRM 121 (143)
T ss_dssp CSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred cCCeEEEEEEEEEEEeCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 899877666655443 334 3 478889999999 5666664
No 50
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=98.60 E-value=1e-06 Score=72.13 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
..+++.++||+|+++||++++.+++++| ++...|+++.+.|++++++.|+.++... .+.++...+...||.+++.
T Consensus 16 ~~~~~v~~f~~a~~~gD~~~l~~l~a~D--~v~~~~~~~~~~G~~~i~~~~~~~~~~~---~~~~~i~~~~~~g~~vv~~ 90 (149)
T 2bng_A 16 EAIRAVEAFLNALQNEDFDTVDAALGDD--LVYENVGFSRIRGGRRTATLLRRMQGRV---GFEVKIHRIGADGAAVLTE 90 (149)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEETTTEEEECHHHHHHHHHTTTTTC---EEEEEEEEEEEETTEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHcCCC--EEEEeCCCCCccCHHHHHHHHHHHHhhc---CcEEEEEEEEEeCCEEEEE
Confidence 4567889999999999999999999999 3444566667899999999888765432 3455556677899987766
Q ss_pred EEeeeEeCCC--ceEEEEEEEEeCCeEEEEEEe
Q 022429 250 MKTYIDIDTG--PFNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 250 ~~e~v~~~~g--~lraT~VfrR~dG~WrlvhhH 280 (297)
.......+|. .+....+|+-+||...-...+
T Consensus 91 ~~~~~~~~G~~~~~~~~~~~~v~dGkI~~~~~y 123 (149)
T 2bng_A 91 RTDALIIGPLRVQFWVCGVFEVDDGRITLWRDY 123 (149)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEECCeEEEEEEEEEEEEECCEEEEEEEE
Confidence 5543433333 367888999999965444344
No 51
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=98.57 E-value=1.5e-06 Score=71.72 Aligned_cols=111 Identities=8% Similarity=0.063 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCC----CCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGEL----FSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL 242 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~----l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~ 242 (297)
...+..++.++||+|+++||++++.++|++| ++...|++.+ +.|++++++.|+....... ..++++...+.+.
T Consensus 27 ~~~~~~~~v~~~~~a~~~gD~~~l~~l~a~D--~~~~~~~~~~~~g~~~G~~~i~~~~~~~~~~~~-~~~~~~i~~~~~~ 103 (156)
T 1tuh_A 27 EAEQNAETVRRGYAAFNSGDMKTLTELFDEN--ASWHTPGRSRIAGDHKGREAIFAQFGRYGGETG-GTFKAVLLHVLKS 103 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEECSSSTTCEEEESHHHHHHHHHHHHHTTT-TCCEEEEEEEEEC
T ss_pred CcchHHHHHHHHHHHHhCCCHHHHHHhcCCC--EEEEccCCCCccceEcCHHHHHHHHHHHHhhcC-CceEEEEEEEEEc
Confidence 3455678889999999999999999999999 4445565544 5899999998888544321 1344455557788
Q ss_pred CC-EEEEEEEeeeEeCCCc--eEEEEEEEEeCCeEEEEEEecC
Q 022429 243 TD-IAWVTMKTYIDIDTGP--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 243 gD-vAvv~~~e~v~~~~g~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
|| .+++.+......+|.. ++.+.+|+.+|| ||+.+...
T Consensus 104 gd~~v~~~~~~~~~~~G~~~~~~~~~~~~~~dG--kI~~~~~~ 144 (156)
T 1tuh_A 104 DDGRVIGIHRNTAERGGKRLDVGCCIVFEFKNG--RVIDGREH 144 (156)
T ss_dssp TTSCEEEEEEEEEEETTEEEEEEEEEEEEEETT--EEEEEEEE
T ss_pred CCCEEEEEEEEEEecCCcEEeeeeEEEEEEECC--EEEEEEEe
Confidence 99 7777666522223332 578899999998 67666643
No 52
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=98.56 E-value=1.1e-06 Score=71.45 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=77.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCC-C-CHHHHHHHHHHHhccCCCceeEEEE
Q 022429 159 NGWKAYYAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELF-S-GYNSVIQSWQIAFNWEQGVDFQVQD 236 (297)
Q Consensus 159 ~~WKelY~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l-~-Gr~aVr~sW~~if~~~~~~~vei~d 236 (297)
.+|+..=....+|+++.+.|.+++.++|.+.|.+.+.+|.....+. +|+.+ . ..+++.+.. ....+....+.+.
T Consensus 2 ~~~~~~~~d~~aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~-~G~~l~~~~~~e~~~~v---~~~~p~~~~~~~I 77 (125)
T 3duk_A 2 MSVKVSVDDIDGITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYV-GDKLAFNGPIKDLYDWH---NSNGPAKNVQSRI 77 (125)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEE-TTEEEEEEETHHHHHHH---HHHCCCTTCEEEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEc-CCCEEeeCCHHHHHHHH---hccCCCCcccceE
Confidence 3566666788899999999999999999999999999997766554 34312 1 234444332 2212223344455
Q ss_pred eEEEEeCCEEEEEEEeeeEeCCCceEEEEEE--EEeCCeEEEEE
Q 022429 237 VRARVLTDIAWVTMKTYIDIDTGPFNMTNVF--EFHNGQWYMVH 278 (297)
Q Consensus 237 l~V~v~gDvAvv~~~e~v~~~~g~lraT~Vf--rR~dG~Wrlvh 278 (297)
+.|.+.||+|.+..... ...+ .+.|+.| .|.||+|||++
T Consensus 78 ~~I~i~gd~A~a~v~~~-~~~~--~~f~D~l~L~k~dg~WkIv~ 118 (125)
T 3duk_A 78 TNIDIVGTVAHARVEAE-NWTN--FKFSDLFLLLKLDGKWTIVN 118 (125)
T ss_dssp EEEEEETTEEEEEEEEE-CSSS--CCEEEEEEEEEETTEEEEEE
T ss_pred EEEEEECCEEEEEEEEE-EcCC--CeEEEEEEEEEeCCEEEEEE
Confidence 67888999999986533 1112 3556666 99999999986
No 53
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=98.54 E-value=5.2e-07 Score=73.08 Aligned_cols=109 Identities=10% Similarity=0.095 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC---CC-C-CCCCHHHHHHHHHHHhccCCCceeEE--EEeEEEEe
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA---SG-E-LFSGYNSVIQSWQIAFNWEQGVDFQV--QDVRARVL 242 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP---gg-~-~l~Gr~aVr~sW~~if~~~~~~~vei--~dl~V~v~ 242 (297)
+.+++.++|++|++++|++++.+++++|. +...| .| + .+.|+++|++.|+..+...+ .+++ ..+.+.+.
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~--~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~ 86 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENA--VFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIH--LSSFTAPTVYRSAD 86 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEECTTCCTTSCSEEESHHHHHHHHTTHHHHEE--EEEECCCEEEEBSS
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCE--EEEeecCCCCCCccccCHHHHHHHHHHhhhcCC--cccceeEEEEEecC
Confidence 67788999999999999999999999994 33444 23 2 47899999998887775432 2333 23334567
Q ss_pred CCEEEEEEEeeeEe-CCC---ceEEEEEEEEeCCeEEEEEEecC
Q 022429 243 TDIAWVTMKTYIDI-DTG---PFNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 243 gDvAvv~~~e~v~~-~~g---~lraT~VfrR~dG~WrlvhhHaS 282 (297)
||.+++.+...... .+| .++.+.+|+.+||++.-...+..
T Consensus 87 gd~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~dGkI~~~~~~~d 130 (150)
T 1s5a_A 87 SNTVIAEFQCDGHVIETGLPYRQSYISVIETRDGRIVRYRDYWN 130 (150)
T ss_dssp SSEEEEEEEEEEEETTTCCBCCCEEEEEEEEETTEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEEcCCCCEEEEEEEEEEEEeCCEEEEEEEeeC
Confidence 88888877766543 233 37889999999997666555544
No 54
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=98.54 E-value=2.3e-06 Score=70.25 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWV 248 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv 248 (297)
....++.++||+|+++||++++.+++++|. +...| +....|++++++.|+.++...+...+++. ++...||.+++
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~--v~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~i~--~~~~~gd~v~~ 78 (152)
T 2gex_A 4 TANKERCLEMVAAWNRWDVSGVVAHWAPDV--VHYDD-EDKPVSAEEVVRRMNSAVEAFPDLRLDVR--SIVGEGDRVML 78 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEECT-TSCEECHHHHHHHHHHHHHHCTTCEEEEE--EEEEETTEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHcCCCe--EEeCC-CCCCCCHHHHHHHHHHHHHhCCCcEEEEE--EEEEeCCEEEE
Confidence 445678899999999999999999999994 33454 34688999999999888876555555554 47788998888
Q ss_pred EEEeeeEe--------CCC---ceEEEEEEEEeC-CeEEEEEEec
Q 022429 249 TMKTYIDI--------DTG---PFNMTNVFEFHN-GQWYMVHHHS 281 (297)
Q Consensus 249 ~~~e~v~~--------~~g---~lraT~VfrR~d-G~WrlvhhHa 281 (297)
.+....+. .+| .++...+|+.+| | ||+.+..
T Consensus 79 ~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~d~G--kI~e~~~ 121 (152)
T 2gex_A 79 RITCSATHQGVFMGIAPTGRKVRWTYLEELRFSEAG--KVVEHWD 121 (152)
T ss_dssp EEEEEEECCSCBTTBCCCCCEEEEEEEEEEEECTTS--CEEEEEE
T ss_pred EEEEEEEecCCcCCcCCCCCEEEEEEEEEEEEecCC--EEEEEEE
Confidence 77765442 123 268889999998 7 6666554
No 55
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=98.54 E-value=1.6e-06 Score=71.83 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCh-hhhhhhhccCCceeeecCCCC---CCCCHHHHHHHHHHHhccCCCceeEEEE
Q 022429 161 WKAYYAATRAVVNVNAEFFNIIRERSL-PAMSRFWLNADYVKCIHASGE---LFSGYNSVIQSWQIAFNWEQGVDFQVQD 236 (297)
Q Consensus 161 WKelY~~t~aI~aa~~aFy~A~~agDl-dam~alWaddd~V~cvhPgg~---~l~Gr~aVr~sW~~if~~~~~~~vei~d 236 (297)
-..+|..+..++++.++|++++++||. ++++.+|++| ++...|.++ ...|++++++.++.+.+.... ..++.
T Consensus 12 ~~~~~~~~~~~kevv~r~~e~~~~gd~~~~l~~lya~D--~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~~--~~~~i 87 (136)
T 3hk4_A 12 HENLYFQGMTIAEIAKDFTELLKQGDNAGAAEKYNADD--IASYEAMEGPMAVSHGKEALRQKSQWWQENHEV--HGGSV 87 (136)
T ss_dssp -------CCCHHHHHHHHHHHHHTTCHHHHHHHHEEEE--EEEECSSCSTTSEEESHHHHHHHHHHHHHTEEE--EEEEE
T ss_pred hhhhHhccccHHHHHHHHHHHHHcCCcHHHHHHHCCCC--EEEEcCCCCCccccCCHHHHHHHHHHHHhcCCe--eeeee
Confidence 357899999999999999999999997 5789999999 444555332 478999999977644443321 22333
Q ss_pred eEEEEeCCEEEEEEEeeeEeC--CCc--eEEEEEEEEeCCeEEEEEEe
Q 022429 237 VRARVLTDIAWVTMKTYIDID--TGP--FNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 237 l~V~v~gDvAvv~~~e~v~~~--~g~--lraT~VfrR~dG~WrlvhhH 280 (297)
..+.+.||.+++......+.. |.+ +....||+-+|| ||+.+.
T Consensus 88 ~~~~v~gd~v~v~~~~~gth~~tG~~i~~~~i~v~rv~DG--kIv~~r 133 (136)
T 3hk4_A 88 EGPYVNGDQFALRFKFDVTPKATGERVTMDEVGLYTVKNG--KITEER 133 (136)
T ss_dssp EEEEEETTEEEEEEEEEEEETTTCCCEEEEEEEEEEEETT--EEEEEE
T ss_pred cceEEcCCEEEEEEEEEEEECCCCcEEEEEEEEEEEEECC--EEEEEE
Confidence 446778998888777665543 444 577889999998 466553
No 56
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=98.53 E-value=2.5e-06 Score=69.78 Aligned_cols=110 Identities=7% Similarity=-0.040 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC---CCCCCHHHHHHHHHHHhccCCCceeEEE-EeEEEEeC
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG---ELFSGYNSVIQSWQIAFNWEQGVDFQVQ-DVRARVLT 243 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg---~~l~Gr~aVr~sW~~if~~~~~~~vei~-dl~V~v~g 243 (297)
.+.++++.++|++|+++||++++.+++++|. +...|++ ..+.|+++|++.|+.+..... ..++++ ...+...|
T Consensus 11 ~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~--v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~G 87 (134)
T 3dmc_A 11 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDF--TFWFPMGEFHGLNVGKERAKEFFTYVSESFH-TGIQISSLDRVTSNE 87 (134)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE--EEEESSGGGBEEEESHHHHHHHHHHHHHTCT-TCEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE--EEEecCCCCCccchhHHHHHHHHHHHHHhhc-CCceeEEEEEEEecC
Confidence 4557889999999999999999999999994 4455665 367899999998887775432 134555 34478899
Q ss_pred CEEEEEEEeeeEeCCCc--eEEEEEEEEeCCeEEEEEEecC
Q 022429 244 DIAWVTMKTYIDIDTGP--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 244 DvAvv~~~e~v~~~~g~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
|.+++.........+.+ ..+..+|+-+||+ |++.+.-
T Consensus 88 ~~vvve~~~~g~~~g~~y~~~~~~~f~v~dGk--I~~~r~Y 126 (134)
T 3dmc_A 88 TTVVFEFRDEGLFLGKPYKNRVAVSFDVRGDK--ICSYREY 126 (134)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEETTE--EEEEEEE
T ss_pred CEEEEEEEEEEEEcCcEeeccEEEEEEEECCE--EEEEEEE
Confidence 98887776444433433 3578888888994 5555543
No 57
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.51 E-value=1.7e-06 Score=69.29 Aligned_cols=104 Identities=13% Similarity=0.273 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC----CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA----SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL 242 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP----gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~ 242 (297)
..++-+++.++||+|++++|++++.++|++|... ..| .+..+.|++++++.|+. +...+...+++ ..+.+.
T Consensus 15 ~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~--~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~~~~~~i--~~~~~~ 89 (129)
T 3fh1_A 15 RSEQTAEIMRRFNDVFQLHDPAALPELIAEECVI--ENTVPAPDGARHAGRQACVQLWSA-IATQPGTRFDL--EETFVA 89 (129)
T ss_dssp THHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEE--ECSCSTTTCCEEESHHHHHHHHHH-HHHCTTCEEEE--EEEEEE
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHhcCCCEEE--ECCCCCCCCCcccCHHHHHHHHHH-HhcCCCceEEE--eEEEEc
Confidence 3456678899999999999999999999999433 333 24456899999999988 65544444544 456788
Q ss_pred CCEEEEEEEeeeEeCCC--ceEEEEEEEEeCCeEEEEEEe
Q 022429 243 TDIAWVTMKTYIDIDTG--PFNMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 243 gDvAvv~~~e~v~~~~g--~lraT~VfrR~dG~WrlvhhH 280 (297)
||.+++...... |+ .++...+|+-+|| ||+.+.
T Consensus 90 gd~v~~~~~~~~---G~~~~~~~~~~~~~~dG--kI~e~~ 124 (129)
T 3fh1_A 90 GDRATIRWRYWM---ADGNSVRGVNLMRVQDG--RIVEAM 124 (129)
T ss_dssp TTEEEEEEEEEC---TTSCEEEEEEEEEEETT--EEEEEE
T ss_pred CCEEEEEEEEEC---CCeeEEeceEEEEEcCC--EEEEEE
Confidence 998877665432 22 3677889998888 455544
No 58
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=98.50 E-value=6.5e-07 Score=74.39 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=78.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE
Q 022429 161 WKAYYAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR 240 (297)
Q Consensus 161 WKelY~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~ 240 (297)
-..+|.+-.+++++.++||+|++++|++++.+++++|.. ...|.+..+.|++++++.|+.+++.. ..+++++.+.
T Consensus 12 ~~~~~~~~~~~~~lv~~~~~a~~~~D~~~l~~l~a~D~v--~~~p~g~~~~G~e~i~~~~~~~~~~~---~~~~~~~~~~ 86 (151)
T 3f7x_A 12 HENLYFQGMTATELVNAYYAAFNAGDMPAFLALLSEDVI--HDINQGERQMGKARFAAFMEKMNRCY---RERLADIVVM 86 (151)
T ss_dssp -------CCCHHHHHHHHHHHHHHTCHHHHHHTEEEEEE--EECTTSCEEESHHHHHHHHHHHHHHE---EEEEEEEEEE
T ss_pred cccceecCHHHHHHHHHHHHHHHcCCHHHHHHhcCCCEE--EECCCCCCcCCHHHHHHHHHHHHHhh---ccceeEEEEE
Confidence 356888899999999999999999999999999999943 33455567899999999888777542 3445554333
Q ss_pred --EeCCEEEEEEEeeeE---------eCCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 241 --VLTDIAWVTMKTYID---------IDTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 241 --v~gDvAvv~~~e~v~---------~~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
..||.+++....... ..+| + ++...+|+-+||+ |+.++.
T Consensus 87 ~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~~dGk--I~~~~~ 139 (151)
T 3f7x_A 87 QNADGSRAAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYIHCGK--IARVTN 139 (151)
T ss_dssp ECTTSSEEEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEEETTE--EEEEEE
T ss_pred EecCCCEEEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEEECCE--EEEEEE
Confidence 468887776665544 1223 2 5778899999984 555443
No 59
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=98.49 E-value=3.9e-06 Score=69.58 Aligned_cols=106 Identities=10% Similarity=0.122 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWV 248 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv 248 (297)
.+.+++.++||++++++|++++.++|++|. +...| + ...|++++++.|+.+++..+...+++. ++...||.+++
T Consensus 4 ~~~~~~v~~~~~a~~~~D~~~~~~~~a~D~--v~~~p-~-~~~G~~~~~~~~~~~~~~~~~~~~~i~--~~~~~gd~v~~ 77 (158)
T 2gey_A 4 AERKALCLEMVAAWNRWDLSGIIKHWSPDI--VHYSE-D-NEVSSADMVKLMEGGLKAFPDLQLEVK--SIMAEEDRVAL 77 (158)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHTTEEEEE--EEEET-T-EEECHHHHHHHHHHHHHHSTTCEEEEE--EEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHcCCCe--EEeCC-C-CCCCHHHHHHHHHHHHHhCCCcEEEEE--EEEEeCCEEEE
Confidence 345678899999999999999999999994 33335 3 578999999999988876555555554 47789998888
Q ss_pred EEEeeeEe--------CCC---ceEEEEEEEEeCCeEEEEEEecC
Q 022429 249 TMKTYIDI--------DTG---PFNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 249 ~~~e~v~~--------~~g---~lraT~VfrR~dG~WrlvhhHaS 282 (297)
.+...... .+| .++.+.+|+.+|| ||+.+...
T Consensus 78 ~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dG--kI~e~~~~ 120 (158)
T 2gey_A 78 RITVTATHQGEFMGVQPTGQRVSWHLVEELRFVDG--KVVEHWDV 120 (158)
T ss_dssp EEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEEe
Confidence 77655432 123 2578999999988 67766543
No 60
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=98.48 E-value=8.8e-07 Score=75.63 Aligned_cols=107 Identities=16% Similarity=0.224 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC--CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe--
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS--GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL-- 242 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg--g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~-- 242 (297)
.++.++++.++||+|+++||+++|+.+|++|. +....|+ +....|+++|++.|+.++... ...++++. +.+.
T Consensus 8 s~~~~~~~v~ry~~A~n~gD~d~l~~l~aeD~-v~~~p~~~p~~~~~Greai~~~f~~~~~~~-d~~~~~e~--i~v~~d 83 (156)
T 3g16_A 8 SRAAMEKVIRTYYDGCNEADEAKMIACFVPEA-VHYFPAGMYGGAFRGAAQIAHRWRTAVETL-GSYWTIDA--LVIDAE 83 (156)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE-EEECBTTSTTSCEESHHHHHHHHHHHHHHH-CEEEEEEE--EEEETT
T ss_pred cchhHHHHHHHHHHHHHcCCHHHHHHhcCCCE-EEecCCCCCCCCccCHHHHHHHHHHHHhhc-CceEEEEE--EEEecC
Confidence 45778999999999999999999999999994 3233332 446789999999999888664 33444444 5555
Q ss_pred CCEEEEEEEeeeEeCCCceEEEEEEEE--eCCeEEEE
Q 022429 243 TDIAWVTMKTYIDIDTGPFNMTNVFEF--HNGQWYMV 277 (297)
Q Consensus 243 gDvAvv~~~e~v~~~~g~lraT~VfrR--~dG~Wrlv 277 (297)
|+.|++...-+.+..|..++...+|+- +||.=.-+
T Consensus 84 G~~av~Ewt~~~T~~g~~~~~~~~f~f~~~DGKI~~~ 120 (156)
T 3g16_A 84 TAEAAIEWTHFKTNQDKVLRGAECVEFDRASGLIREI 120 (156)
T ss_dssp TTEEEEEEEEEEGGGTEEEEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEEEEEEeCCCeeEecceEEEEEecCCEEEEE
Confidence 888876554442222345777778777 67754433
No 61
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=98.47 E-value=3.8e-06 Score=67.24 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE--EeCCEEEE
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR--VLTDIAWV 248 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~--v~gDvAvv 248 (297)
.+++.++||+|++++|++++.+++++|. +...|++....|++++++.|+.+.... ...++++.+. ..||.+++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~--~~~~p~~~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~gd~v~~ 84 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDV--AHDLNQGPREIGRAAFASFLQRMNDSY---REQLRDIVVTANDEGTRVGA 84 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE--EEECTTSCEEESHHHHHHHHHHHHHHE---EEEEEEEEEEECTTSSEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcE--EEEcCCCCceEcHHHHHHHHHHHhhhc---chhhhheeeeecccCCEEEE
Confidence 4578899999999999999999999994 334455667899999999877765432 2345555444 35888777
Q ss_pred EEEeeeE---------eCCC---ceEEEEEEEEeCCeEEEEEEec
Q 022429 249 TMKTYID---------IDTG---PFNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 249 ~~~e~v~---------~~~g---~lraT~VfrR~dG~WrlvhhHa 281 (297)
....+.. ..+| .++...+|+-+||+ |+.++.
T Consensus 85 ~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~~dGk--I~~~~~ 127 (140)
T 3i0y_A 85 EYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDVRDGQ--ITRVTN 127 (140)
T ss_dssp EEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEEETTE--EEEEEE
T ss_pred EEEEEEEeecccCCCcCCCCCEEEEEeeEEEEEECCE--EEEEEE
Confidence 6665543 1223 26788999999995 445443
No 62
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=98.46 E-value=4.9e-06 Score=68.96 Aligned_cols=119 Identities=6% Similarity=0.029 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhh-hhhhccCCceeeecC--CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAM-SRFWLNADYVKCIHA--SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL 242 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam-~alWaddd~V~cvhP--gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~ 242 (297)
....+|+++..+|..++.++|.+.+ ..+|++|..+-.-.. ......|++++.+.+...+.........+..+.|.+.
T Consensus 8 ~Dr~~I~~L~~rY~~~~D~~d~~~l~~~~ft~Da~~d~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~t~H~~~n~~I~vd 87 (159)
T 4gb5_A 8 TDRAEIIELFGRYADIADLKEFTDLPRRVHTDPLTIDFESVTGMPPMTVPLSDYGAALRASFGAFSATHHAITGHVVTID 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHEEEEEEEECHHHHCCCCEEECHHHHHHHHHHHHTTCSEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHhhCcCCEEEEecCCCCCcccccHHHHHHHHHHHhccCCceEEEecCCceEEEc
Confidence 3567899999999999999999876 579999853321111 1234678999999988887655445677888889999
Q ss_pred CCEEEEEEEeeeE--e-----C-CCc-----eEEEEEEEEeCCeEEEEEEecCCC
Q 022429 243 TDIAWVTMKTYID--I-----D-TGP-----FNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 243 gDvAvv~~~e~v~--~-----~-~g~-----lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
||.|...+.-... . . ++. -++...|+|++|+|||.+..-.+.
T Consensus 88 gD~A~~~~~~~a~~~~~~~~~~~~~~~~~~~G~Y~d~~~r~~g~Wri~~r~~~~~ 142 (159)
T 4gb5_A 88 SDRATIHAHVRAEHWLPAEVAGDGPDRWLVVGFYDNEAVRTADGWRLSSVKLTAS 142 (159)
T ss_dssp TTEEEEEEEEEEEEECCHHHHTTSCCEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEEEEEEEEEeeccccCCCCceEEEEEEEEEEEEEEECCEEEEEEEEEEEE
Confidence 9988776543321 1 1 221 378899999999999999876654
No 63
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=98.45 E-value=2.6e-06 Score=68.64 Aligned_cols=105 Identities=8% Similarity=-0.034 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCC-CCHHHHHHHHHHHhccCC-CceeEEEEeEEEEeCCEEEE
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELF-SGYNSVIQSWQIAFNWEQ-GVDFQVQDVRARVLTDIAWV 248 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l-~Gr~aVr~sW~~if~~~~-~~~vei~dl~V~v~gDvAvv 248 (297)
-.++.++||++++++|++++.+++++|. +...|++... .|++++++.|+.+++..+ ...+++ .++...||.+++
T Consensus 4 ~~~~v~~~~~a~~~~d~~~~~~~~a~d~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~gd~v~~ 79 (144)
T 1sjw_A 4 QTEIVRRMVSAFNTGRTDDVDEYIHPDY--LNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEE--VRIEERGPWVKA 79 (144)
T ss_dssp HHHHHHHHHHHHHHCCCTTGGGTEEEEE--ECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEE--EEEEEETTEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCcCe--EEccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEE--EEEEEeCCEEEE
Confidence 3567889999999999999999999983 3334433333 899999999988876544 445554 447788998777
Q ss_pred EEEeeeEe--------CCCc---eEEEEEEEEeCCeEEEEEEec
Q 022429 249 TMKTYIDI--------DTGP---FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 249 ~~~e~v~~--------~~g~---lraT~VfrR~dG~WrlvhhHa 281 (297)
....+... .+|. ++...+|+-+|| ||+.++.
T Consensus 80 ~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dG--kI~~~~~ 121 (144)
T 1sjw_A 80 YLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIVDG--KIRDHRD 121 (144)
T ss_dssp EEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 76655442 1232 577889999998 5666654
No 64
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=98.45 E-value=5.6e-07 Score=71.46 Aligned_cols=97 Identities=13% Similarity=0.176 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC------C--CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA------S--GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRA 239 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP------g--g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V 239 (297)
+++++++.++|++|++++|++++.++|++|... ..| + +..+.|+++|++.|+..++..+...+++.. +
T Consensus 7 ~~~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~--~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~--~ 82 (122)
T 3h3h_A 7 QAFAQQFSREWIDAWNAHDLDAILSHYADGFEM--SSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIPDLHFEWIA--T 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEE--ECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCTTCCCEEEE--E
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHhcCCCEEE--ECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCCCcEEEEEE--E
Confidence 456788999999999999999999999999543 333 1 257899999999999998766556666654 4
Q ss_pred EEeCCEEEEEEEeeeEeCCCceEEEEEEEE-eCCe
Q 022429 240 RVLTDIAWVTMKTYIDIDTGPFNMTNVFEF-HNGQ 273 (297)
Q Consensus 240 ~v~gDvAvv~~~e~v~~~~g~lraT~VfrR-~dG~ 273 (297)
...++...+.+.. .+|. ++..+|+- +||+
T Consensus 83 ~~~~~~~~~~~~~----~~G~-~~~~~~~~~~dGk 112 (122)
T 3h3h_A 83 LAGVDSVAIHYRG----AKGR-LALEVFHFGPDRR 112 (122)
T ss_dssp EECSSEEEEEEEC----GGGC-EEEEEEEECTTSS
T ss_pred EecCcEEEEEEEC----CCCC-EEEEEEEECCCCc
Confidence 5567765555542 1232 34788998 6774
No 65
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=98.45 E-value=1.5e-06 Score=69.30 Aligned_cols=107 Identities=8% Similarity=-0.033 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC----CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG----ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD 244 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg----~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD 244 (297)
..-+++.++||+|+++||++++.+++++|. +...|++ ..+.|++++++.|+.++...+.. .++..++...||
T Consensus 5 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~--~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~~~--~~~~~~~~~~gd 80 (135)
T 3fgy_A 5 QENVQIVKDFFAAMGRGDKKGLLAVSAEDI--EWIIPGEWPLAGTHRGHAALAALLQKASEMVEIS--YPEPPEFVAQGE 80 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEE--EEEECSSSTTCEEEEHHHHHHHHHHHHHHHEEEE--CSSCCEEEEETT
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHhcCCCe--EEEEcCCCccceEEeCHHHHHHHHHHHHHhhCcc--eeeeEEEEEcCC
Confidence 345678899999999999999999999994 3344442 24689999999888877643322 234445678899
Q ss_pred EEEEEEEeeeEe-CCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 245 IAWVTMKTYIDI-DTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 245 vAvv~~~e~v~~-~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
.+++.+...... .+| . ++...+|+-+|| ||+.++.
T Consensus 81 ~v~v~~~~~~~~~~~G~~~~~~~~~~~~~~dG--kI~~~~~ 119 (135)
T 3fgy_A 81 RVLVVGFATGRVKSTNRTFEDDWVFAITVRKS--KVTSIRE 119 (135)
T ss_dssp EEEEEEEEEEEETTTCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEeEEEcCCCCEecccEEEEEEEECC--EEEEEEE
Confidence 888777665543 233 3 566889999888 6777664
No 66
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=98.45 E-value=2.2e-06 Score=69.18 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCC-CHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFS-GYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~-Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
...+|+++.+.|.+++.++|.+.|.+.+.+|.....+. +|+... ..++..+ -. ............+.+.|.+.||+
T Consensus 7 d~~aI~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~-~g~~~~~~~~~~~~-v~-~~p~~~~~~~~~~i~~I~i~gd~ 83 (120)
T 3fka_A 7 HIAALTALVETYVMAMTRGDRPALERIFFGKASEVGHY-EGELLWNSRDAFIA-MC-EDAADAETDPFWAISSVSVQGDI 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEE-TTEEEEEEHHHHHH-HH-HHHCCSSCCCCEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEec-CCcEEEcCHHHHHh-hc-CCccCCCCCceEEEEEEEEECCE
Confidence 56779999999999999999999999999998776665 343222 2233333 22 11111122344556678889999
Q ss_pred EEEEEEeeeEeCCCceEEEEEE--EEeCCeEEEEEE
Q 022429 246 AWVTMKTYIDIDTGPFNMTNVF--EFHNGQWYMVHH 279 (297)
Q Consensus 246 Avv~~~e~v~~~~g~lraT~Vf--rR~dG~Wrlvhh 279 (297)
|.+...... .+ .+.|+.| .|.||+|||++-
T Consensus 84 A~a~v~~~~--~~--~~f~D~~~L~k~dg~WkIv~K 115 (120)
T 3fka_A 84 AMLHVENDW--AG--MRFDDFLTVLLHEGSWRIVSK 115 (120)
T ss_dssp EEEEEEEEE--TT--EEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEEc--CC--CceEEEEEEEEeCCEEEEEEE
Confidence 999877432 12 4567766 999999999863
No 67
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=98.43 E-value=3.1e-06 Score=68.19 Aligned_cols=105 Identities=10% Similarity=0.051 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC----CCCCCCHHHHH-HHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS----GELFSGYNSVI-QSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg----g~~l~Gr~aVr-~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
-+++.++||+|+++||++++.+++++|.. ...|+ +....|+++++ +.|+.++...+ .+.++..++...||.
T Consensus 14 ~~~~v~~~~~a~~~gD~~~~~~l~a~D~~--~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~gd~ 89 (140)
T 3ec9_A 14 PYQIVADHYAASDRHDPAAMMADIAPAIE--WTEMAGFPCAGTYRSADEIVRNVFRRLGEEWD--GYTFKLDALHDAGDT 89 (140)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEECTTSTTCEEECSHHHHHHHTHHHHHHHEE--EEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCCCeE--EEEcCCCccceEEcCHHHHHHHHHHHHHhhCC--cceeEEEEEEEcCCE
Confidence 35678899999999999999999999943 34343 23568999996 45777665432 345555567788998
Q ss_pred EEEEEEeeeEe-CCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 246 AWVTMKTYIDI-DTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 246 Avv~~~e~v~~-~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
+++.+...... .+| . .+...+|+-+|| ||+.++.
T Consensus 90 v~v~~~~~~~~~~tG~~~~~~~~~v~~v~dG--kI~~~~~ 127 (140)
T 3ec9_A 90 VIGVGRYSGTYRRTGKSFECRVAHVWRVDAG--KIVHFEQ 127 (140)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEEEEcCCCCEEEeEEEEEEEEECC--EEEEEEE
Confidence 88887766553 233 3 467889999998 4655553
No 68
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.41 E-value=1.1e-07 Score=86.51 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=45.0
Q ss_pred cchhhcccHHHHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhhhcc
Q 022429 97 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHK 146 (297)
Q Consensus 97 ~~~l~~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l~~~ 146 (297)
...+..||+|++.+||+||+..|+++++.|||+|++++.+..+|+++.-.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~l~l~ 55 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLT 55 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSEEECT
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhheeeccc
Confidence 34578999999999999999999999999999999999999999987543
No 69
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=98.40 E-value=9.1e-06 Score=65.84 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
+.+.+++.++|++||+++|.+++.+++++|... ..++.++.+.|++++++.+..+... . ..++..++...||.++
T Consensus 4 ~~~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~-~~P~~~~~~~Gr~~~~~~~~~~~~~--~--~~~~i~~~~a~G~~vv 78 (128)
T 3en8_A 4 EEKIREALNAHWQASAAGDFDAEHDIYDDDAIC-DYPQSGERILGRMNLQALRSHHPGK--P--AGFEVRRIQGEGNLWI 78 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHTTTEEEEEEE-EETTTTEEEESHHHHHHHHHHTTCS--C--SEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhcCCCEEE-ECCCCCCEEECHHHHHHHHHHCCCC--C--cceEEEEEEECCCEEE
Confidence 467789999999999999999999999999422 2334466789999999866543321 1 1234455788999888
Q ss_pred EEEEeeeEeCCCceEEEEEEEEeCCeEEEEEEec
Q 022429 248 VTMKTYIDIDTGPFNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 248 v~~~e~v~~~~g~lraT~VfrR~dG~WrlvhhHa 281 (297)
+.+.... .+..+.+..+|+-+||+ |++...
T Consensus 79 ~~~~~~~--~g~~~~~~~v~~v~dGk--I~~~~~ 108 (128)
T 3en8_A 79 TEYSISY--NGRPAYTVSIMEFRNGK--VVHETQ 108 (128)
T ss_dssp EEEEEEE--TTEEEEEEEEEEEETTE--EEEEEE
T ss_pred EEEEEec--CCEEEEEEEEEEEcCCE--EEEEEE
Confidence 8776442 23356788899999984 555443
No 70
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=98.36 E-value=7.4e-06 Score=68.18 Aligned_cols=107 Identities=11% Similarity=0.049 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHH-HHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 167 ATRAVVNVNAEFFN-IIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~-A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
.+.+-+++..+||+ +++++|++++.+++++| ++.-.|+ ...|++++++.|+.+++..+... ++..++...||.
T Consensus 25 ~~~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D--~v~h~P~--~~~G~e~~~~~~~~~~~~~pd~~--~~i~~iiaeGD~ 98 (148)
T 3g0k_A 25 EEQANHDLVIEMYNKVLIAMDSSAVDRYIAPG--YVQHSSL--AEPSVEALKGFLDRVRAESPDAR--QTIHRSFVDGDH 98 (148)
T ss_dssp HHHHHHHHHHHHHHHTTTTTCGGGGGGTEEEE--EEECCSS--SCSSHHHHHHHHHHHHHHCCSCE--EEEEEEEEETTE
T ss_pred cHHHHHHHHHHHHHHHHhcCCHHHHHHhcCcC--eEEcCCC--CCCCHHHHHHHHHHHHHhCCCce--EEEEEEEEECCE
Confidence 45667788999999 99999999999999988 3323343 35899999999988886554444 445568889998
Q ss_pred EEEEEEeeeEeCCC-ceEEEEEEEEeCCeEEEEEEecC
Q 022429 246 AWVTMKTYIDIDTG-PFNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 246 Avv~~~e~v~~~~g-~lraT~VfrR~dG~WrlvhhHaS 282 (297)
+++.+..... .+| .+....+||-+|| ||+-|-..
T Consensus 99 V~~~~~~~~~-~~g~~~~~~difr~~dG--kIvEhWd~ 133 (148)
T 3g0k_A 99 VITHTHVERW-PGDAGLAVVDIFRVEGG--MIVEHWDV 133 (148)
T ss_dssp EEEEEEEECS-TTCCCEEEEEEEEEETT--EEEEEEEE
T ss_pred EEEEEEEEEC-CCCccEEEEEEEEEECC--EEEEEccc
Confidence 8887765422 333 5788999999988 56555443
No 71
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=98.31 E-value=1.1e-05 Score=66.53 Aligned_cols=106 Identities=8% Similarity=0.000 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCC-CCCHHHHHHHHHHHhccCC-CceeEEEEeEEEEeCCEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGEL-FSGYNSVIQSWQIAFNWEQ-GVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~-l~Gr~aVr~sW~~if~~~~-~~~vei~dl~V~v~gDvAv 247 (297)
+-.++.++||++++++|++++..++++|. +...|++.. ..|++++++.|+.+++..+ ...+++. ++...||.++
T Consensus 12 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~--v~~~p~~~~~~~G~~~~~~~~~~~~~~~p~d~~~~i~--~~~~~gd~v~ 87 (153)
T 2f99_A 12 EQIAAVRRMVEAYNTGKTDDVADYIHPEY--MNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEV--GIEERADWVR 87 (153)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEE--ECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEE--EEEEETTEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCe--EEecCCCCCCCCCHHHHHHHHHHHHHHCCCCcEEEEE--EEEEeCCEEE
Confidence 34567789999999999999999999983 333454433 5899999999988876654 4555544 4678899877
Q ss_pred EEEEeeeEe--------CCCc---eEEEEEEEEeCCeEEEEEEec
Q 022429 248 VTMKTYIDI--------DTGP---FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 248 v~~~e~v~~--------~~g~---lraT~VfrR~dG~WrlvhhHa 281 (297)
+.+....+. ..|. +....+|+-+|| ||+.+..
T Consensus 88 ~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v~dG--kI~e~~~ 130 (153)
T 2f99_A 88 ARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHFVDG--KIHHHRD 130 (153)
T ss_dssp EEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 776655432 1232 578889999998 5666554
No 72
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=98.29 E-value=1.2e-05 Score=64.07 Aligned_cols=98 Identities=9% Similarity=0.133 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
+-+++.++|++|+++||++++.+++++| ++...|++ .+.|++++.+.+..++. .+++ ..+.+.|+.+++.
T Consensus 7 ~~~~~v~~f~~A~~~gD~~~l~~lla~D--vv~~~~~g-~~~G~~~v~~~~~~~~~-----~~~~--~~~~~~G~~v~~~ 76 (114)
T 3f40_A 7 TTRDLVLEFIHALNTENFPAAKKRLNEN--FTFNGPMG-HREGSERYMNDMEKMKF-----KYVV--HKMFEEGNDVCLI 76 (114)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEEETTE-EEESHHHHHHHHHHHCC-----EEEE--EEEEEETTEEEEE
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHhcCCC--eEEECCCC-cccCHHHHHHHHHHHHh-----heEE--EEEEecCCcEEEE
Confidence 3467889999999999999999999998 55566655 67899999998776654 3333 3467789977664
Q ss_pred EEeeeEeCCCceEEEEEEEEeCCeEEEEEEec
Q 022429 250 MKTYIDIDTGPFNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 250 ~~e~v~~~~g~lraT~VfrR~dG~WrlvhhHa 281 (297)
.... ..++.+.+..+|+-+|| ||+..+.
T Consensus 77 ~~~~--~~g~~~~~~~~~~v~dG--rI~~i~~ 104 (114)
T 3f40_A 77 YDIN--MNGKTIAASGLYHLEKG--EITSLHV 104 (114)
T ss_dssp EEEE--ETTEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEe--cCCcEeecceEEEEcCC--eEEEEEE
Confidence 4322 22344677778888888 5666653
No 73
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=98.28 E-value=9e-07 Score=70.73 Aligned_cols=106 Identities=11% Similarity=0.078 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC----CCCCCHHHHHH-HHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG----ELFSGYNSVIQ-SWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg----~~l~Gr~aVr~-sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
+++.++||+|+++||++++.+++++|.. ...|++ ....|++++++ .|+.+....+...+++.+++....||.+
T Consensus 7 ~~~v~~~~~a~~~~D~~~~~~l~a~D~~--~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v 84 (134)
T 3grd_A 7 LEIIRSTYEGSASSNAKHLAEALSEKVE--WTEAEGFPYGGTYIGVEAIMENVFSRLGSEWNDYKASVNMYHEVSGKDVI 84 (134)
T ss_dssp HHHHHTTTSSCHHHHHHHHHHHEEEEEE--EEECTTSTTCEEEESHHHHHHHTHHHHHHHEEEEEEEEEEEEEBTTSSEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcCCCeE--EEecCCcccCcEEeCHHHHHHHHHHHHHhhccccccchhheeeecCCCEE
Confidence 5678899999999999999999999943 333432 25689999985 5676665433334444444336788887
Q ss_pred EEEEEeeeEe-CCC-c--eEEEEEEEEeCCeEEEEEEec
Q 022429 247 WVTMKTYIDI-DTG-P--FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 247 vv~~~e~v~~-~~g-~--lraT~VfrR~dG~WrlvhhHa 281 (297)
++.+...... .+| . .+...+|+-+|| ||+.++.
T Consensus 85 ~v~~~~~~~~~~tG~~~~~~~~~v~~~~dG--kI~~~~~ 121 (134)
T 3grd_A 85 IAEGMYSGVYKDTGKSFEAEFVHVWQLENG--KIVKFKQ 121 (134)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEeeEECCCCCEeeeeEEEEEEEECC--EEEEEEE
Confidence 7777766553 233 3 578889999998 5666654
No 74
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=98.23 E-value=9.7e-06 Score=65.95 Aligned_cols=105 Identities=12% Similarity=0.097 Sum_probs=76.7
Q ss_pred HHHHHHHHHH-HHHhCC--hhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 171 VVNVNAEFFN-IIRERS--LPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 171 I~aa~~aFy~-A~~agD--ldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
-+++.++||+ +++++| ++++..++++|. +....|. ....|++++++.|+.+++..+...+++. ++...||.++
T Consensus 11 n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~-~~~~~~~-~~~~G~~~~~~~~~~~~~~~pd~~~~i~--~~~~~gd~v~ 86 (146)
T 3kkg_A 11 NVETVLRLFDEGWGAQDGWRDVWRETMTPGF-RSIFHSN-QAVEGIEQAIAFNAVLFEGFPRLEVVVE--NVTVEGDNVV 86 (146)
T ss_dssp HHHHHHGGGTTTSTTSTTHHHHHHHHEEEEE-EEEETTS-CCEESHHHHHHHHHHHHHHSTTCEEEEE--EEEEETTEEE
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHcCCCe-EEecCCC-CCCCCHHHHHHHHHHHHHhCCCceeEEE--EEEEeCCEEE
Confidence 4567889999 999999 999999999983 3222333 5789999999999888876555555554 5678899888
Q ss_pred EEEEeeeEe--------CCCc---eEEEEEEEEeCCeEEEEEEec
Q 022429 248 VTMKTYIDI--------DTGP---FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 248 v~~~e~v~~--------~~g~---lraT~VfrR~dG~WrlvhhHa 281 (297)
+.+....+. ..|. ++...+|+-+|| ||+.++.
T Consensus 87 ~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dG--kI~e~~~ 129 (146)
T 3kkg_A 87 VQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADG--QVIEMRY 129 (146)
T ss_dssp EEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEecCccCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 877655442 1232 578889999988 5666654
No 75
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=98.21 E-value=2.1e-05 Score=62.56 Aligned_cols=103 Identities=9% Similarity=0.061 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 170 AVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
..+++.++||++++++|++++..+|++|. + .| + ...|++++++.|+..++..+...+++.+ +...||.+++.
T Consensus 4 ~~~~~v~~~~~~~~~~d~~~~~~~~a~d~--~-~~--~-~~~G~~~~~~~~~~~~~~~pd~~~~i~~--~~~~gd~v~~~ 75 (128)
T 3ehc_A 4 TLNDIYLAYLDSLNHQAFDELGTFVDDNV--E-HN--G-RPFGLSGYRDMLVKDFADIPDLRFEAEI--LVSDATRLAAR 75 (128)
T ss_dssp CHHHHHHHHHHHHHTTCGGGGGGTEEEEE--E-ET--T-BCCHHHHHHHHHHHHHHHCTTCCCCEEE--EEECSSEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCcce--E-eC--C-CCCCHHHHHHHHHHHHhhCCCceEEEEE--EEEECCEEEEE
Confidence 35678889999999999999999999983 2 24 2 5689999999998888766555565554 66789987777
Q ss_pred EEeeeEe--------CCC-c--eEEEEEEEEeCCeEEEEEEecC
Q 022429 250 MKTYIDI--------DTG-P--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 250 ~~e~v~~--------~~g-~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
...+.+. ..| + ++...+||-+|| ||+.|...
T Consensus 76 ~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dG--kI~e~~~~ 117 (128)
T 3ehc_A 76 LFFDCTPKSIFMDLPVNGRRVQFCEHVFYDFEQA--KIRRVWSV 117 (128)
T ss_dssp EEEEECCSSEETTEECTTCCEEEEEEEEEEEETT--EEEEEEEE
T ss_pred EEEEEEEcCcccCCCCCCCEEEEEEEEEEEEeCC--EEEEEEEc
Confidence 6655431 123 2 567889999988 77777653
No 76
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=98.16 E-value=1.6e-05 Score=65.98 Aligned_cols=103 Identities=9% Similarity=0.057 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEE--eCCEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARV--LTDIAWVT 249 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v--~gDvAvv~ 249 (297)
.++.++||+|++++|++++.+++++|.. ... |.+....|++++++.|+.+++..+ -.+.++.+.+ .||.+++.
T Consensus 21 ~~~v~~~~~a~n~~D~~~l~~l~a~D~v-~~~-~~~~~~~G~e~i~~~~~~~~~~~~---~~~~~~~~~~~~~gd~v~~~ 95 (150)
T 3f8h_A 21 NDTIARYFDAFNAGDTDGMLACLSEDVA-HHV-NEGNIRVGKEKFAAFCAHMSHCYK---EELTDMVIFATPDATRAAAE 95 (150)
T ss_dssp CCHHHHHHHHHHHTCHHHHHTTEEEEEE-EEE-ETTEEEESHHHHHHHHHHHHHHEE---EEEEEEEEEECTTSSEEEEE
T ss_pred HHHHHHHHHHHHccCHHHHHHHcCCCeE-EeC-CCCcceeCHHHHHHHHHHHHHhCC---ccccceEEEEecCCCEEEEE
Confidence 4567889999999999999999999953 223 344578999999998887775432 2455555443 57876665
Q ss_pred EEeeeEe---------CCCc---eEEEEEEEEeCCeEEEEEEec
Q 022429 250 MKTYIDI---------DTGP---FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 250 ~~e~v~~---------~~g~---lraT~VfrR~dG~WrlvhhHa 281 (297)
....... .+|. ++...+|+-+|| ||+.++.
T Consensus 96 ~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~~dG--kI~~~~~ 137 (150)
T 3f8h_A 96 YTVNGTYLATDEGLPEARQQSYKLPAGSFFDLRDG--LITRVTT 137 (150)
T ss_dssp EEEEEEECSCCTTSCCCSSEEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEEeeeEEEEEeCC--EEEEEEE
Confidence 5443331 1232 678899999998 4655554
No 77
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=98.14 E-value=5.3e-06 Score=69.34 Aligned_cols=107 Identities=9% Similarity=0.062 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC---C--CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE--E
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS---G--ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR--V 241 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg---g--~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~--v 241 (297)
...+++.++||+|++++|++++.+++++|... ..|. | ..+.|+++|++.|+.++...+. . +.++.+. .
T Consensus 23 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~--~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~~--~-~~~~~~~~~~ 97 (163)
T 1z1s_A 23 MNAKEILVHSLRLLENGDARGWCDLFHPEGVL--EFPYAPPGWKTRFEGRETIWAHMRLFPEHLTV--R-FTDVQFYETA 97 (163)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEE--ECSSCCTTSCCEEESHHHHHHTTTTGGGTEEE--E-ECCCEEECCS
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHCCCCEEE--ECcCCCCCCCcccCCHHHHHHHHHHHHHhCcc--c-eeeeEEEEEe
Confidence 34567788999999999999999999999533 3331 2 2478999999987766553221 2 3333333 5
Q ss_pred eCCEEEEEEEeeeEe--CCCc--eEEEEEEEEeCCeEEEEEEecC
Q 022429 242 LTDIAWVTMKTYIDI--DTGP--FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 242 ~gDvAvv~~~e~v~~--~~g~--lraT~VfrR~dG~WrlvhhHaS 282 (297)
.||.+++.+...... .|.. +....+|+-+|| ||+.+...
T Consensus 98 ~g~~vv~~~~~~g~~~~tG~~~~~~~~~v~~v~dG--kI~~~~~y 140 (163)
T 1z1s_A 98 DPDLAIGEFHGDGVATVSGGKLAQDYISVLRTRDG--QILLYRDF 140 (163)
T ss_dssp STTEEEEEEEEEEEETTTCCEEEEEEEEEEEEETT--EEEEEEEE
T ss_pred CCCEEEEEEEEEEEEeCCCCEEccceEEEEEecCC--EEEEEEee
Confidence 678888877766543 2333 567889999998 67776653
No 78
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=98.11 E-value=2.1e-05 Score=65.17 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC-CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS-GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg-g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
.+.++..++||+|+++||++++.++|++|. +...|. +..+.|+++|++.|...+...+ .+++....+...|+.++
T Consensus 9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~--v~~~P~~~~~~~G~~~v~~~~~~~~~~~~--~f~~~~~~~~~dg~~~~ 84 (143)
T 3mso_A 9 ANAAATLAEWHGLIARRDLSGLPRLLHPDA--VFRSPMAHKPYAGAPVVSMILNTVLTVFE--DFAYHRQLASADGRSVV 84 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTGGGGEEEEE--EEECSSCSSCEESHHHHHHHHHHHHHHCE--EEEEEEEEEETTSSEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCE--EEECCCCCCCccCHHHHHHHHHHHHhhCC--ceEEEEEEEccCCCEEE
Confidence 457888999999999999999999999994 444453 4678999999999988886543 45555433323566666
Q ss_pred EEEEeeeEeCCCceEEEEEEEEe-CCe
Q 022429 248 VTMKTYIDIDTGPFNMTNVFEFH-NGQ 273 (297)
Q Consensus 248 v~~~e~v~~~~g~lraT~VfrR~-dG~ 273 (297)
+.....+ +|..+....+++-. ||+
T Consensus 85 ~~f~~~~--~g~~v~Gv~v~~~~~dGk 109 (143)
T 3mso_A 85 LEFSARV--GERELKGIDMIRFDDDGR 109 (143)
T ss_dssp EEEEEEE--TTEEEEEEEEEEECTTSC
T ss_pred EEEEEEE--CCEEEEEEEEEEECCCCc
Confidence 6665443 23356777888875 563
No 79
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=98.04 E-value=6.9e-05 Score=60.70 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=76.3
Q ss_pred HHHHHHHHHHH-HHHhCChhhhhhhhccCCceeeecCC---CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 170 AVVNVNAEFFN-IIRERSLPAMSRFWLNADYVKCIHAS---GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 170 aI~aa~~aFy~-A~~agDldam~alWaddd~V~cvhPg---g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
+-+++.++||+ +++++|++++..++++|..+ ...|+ .....|++++++.|+.+++..+...+++. ++...||.
T Consensus 7 ~~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~-~~~p~~~~~g~~~G~~~~~~~~~~~~~~~pd~~~~i~--~~~~~gd~ 83 (146)
T 3f9s_A 7 KAKEILTQFTREVWSEGNIEASDKYIAPKYTV-LHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDIQ--GLFADGDA 83 (146)
T ss_dssp THHHHHHHHHHHHTTTCCGGGHHHHEEEEEEE-EECTTCTTTTCEECHHHHHHHHHHHHHHSTTCEEEEE--EEEEETTE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHcCCCeee-ccCCCCCCCCCcCCHHHHHHHHHHHHhhCCCcEEEEE--EEEEeCCE
Confidence 45678889996 99999999999999998321 33443 23578999999998888776555555544 57788998
Q ss_pred EEEEEEeeeEe--------CCCc---eEEEEEEEEeCCeEEEEEEec
Q 022429 246 AWVTMKTYIDI--------DTGP---FNMTNVFEFHNGQWYMVHHHS 281 (297)
Q Consensus 246 Avv~~~e~v~~--------~~g~---lraT~VfrR~dG~WrlvhhHa 281 (297)
+++......+. ..|. ++...+||-+||+ |+.+..
T Consensus 84 v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dGk--I~e~~~ 128 (146)
T 3f9s_A 84 VVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFDGNR--LTGHWQ 128 (146)
T ss_dssp EEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEEETE--EEEEEE
T ss_pred EEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECCE--EEEEEE
Confidence 77776655432 1232 5778899999884 666654
No 80
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=97.98 E-value=9e-06 Score=67.13 Aligned_cols=116 Identities=12% Similarity=0.127 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHH-----hCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 172 VNVNAEFFNIIR-----ERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 172 ~aa~~aFy~A~~-----agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
.++.++||+.+. .+|++.+.++|++|..+ . ++++...|+++|++.|+.+++..+...+.+....+...||.+
T Consensus 5 ~~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~Dav~--~-~~~~~~~G~~ai~~F~~~~~~a~~~~~~~~~~~v~~~~gd~~ 81 (131)
T 3er7_A 5 TTTLDRYFDLFDASRTDEKAFDDLISLFSDEITF--V-LNGQEQHGIDAWKQFVRMVFTANQDIKHMYAGWVPSETGDTM 81 (131)
T ss_dssp -CHHHHHHHHHHHTTTCHHHHHHHHHTEEEEEEE--E-ETTEEEESHHHHHHHHHHHHHHEEEEEEEECCCEECSSTTCE
T ss_pred HHHHHHHHHHHhhccCCccCHHHHHHHhCCCeEe--c-CCCCCcCChHHHHHHHHHHHhhCcCceEEEEEEEEecCCCEE
Confidence 346788999997 36799999999999644 3 345568999999999998887654334434433224467777
Q ss_pred EEEEEeeeEeCCC-c--eEEEEEEEEe-CCeEEEEEEecCCCCCCCcccccc
Q 022429 247 WVTMKTYIDIDTG-P--FNMTNVFEFH-NGQWYMVHHHSSVMLVDGEVEQQV 294 (297)
Q Consensus 247 vv~~~e~v~~~~g-~--lraT~VfrR~-dG~WrlvhhHaSp~~~~~~~~~~~ 294 (297)
.+...-..+..+| . ++.+.+|+-. || ||+.++..+- ...+-|||
T Consensus 82 ~~~w~~~g~~~~G~~~~~~g~dv~~fd~dG--kI~~~~~~~d--~~~~~~q~ 129 (131)
T 3er7_A 82 ETRWAVCGKSADGSVFTQDGTDIARLNADG--KIVYLANVPD--DTAMFNQY 129 (131)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEECTTS--CEEEEEEEEC--CC------
T ss_pred EEEEEEEEEECCCCEEEEeeeEEEEEcCCC--cEEEEEEccC--hHHHHHHh
Confidence 7766666553334 3 6889999998 56 8999997754 55566665
No 81
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=97.97 E-value=3.5e-05 Score=70.88 Aligned_cols=109 Identities=9% Similarity=0.048 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvA 246 (297)
..+++++.++|+++++++|++++.++|++|..+ ..| +.+.+.|+++|++.|+..+.... .+++..+...+.|+.+
T Consensus 5 ~~~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~--~~P~~~~~~~Gr~ai~~~~~~~~~~~~--~~~~~~~~~~~~G~~v 80 (283)
T 3rga_A 5 ETVRKEVALEYCRRVNAGELEGVLQLFAPDARL--VDPLGTEPVVGRAALAARLAPALRGAV--HEEPGRPYAAHDGTSV 80 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEE--ECSSSSCCEESHHHHHHHHHHHHHTTC--EEEECCCBCCSSSSEE
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEE--ECCCCCCCcCcHHHHHHHHHHHHhhcC--ceEEEEEEeeeeCCEE
Confidence 356788999999999999999999999999533 455 34578999999999988886653 3444443333678888
Q ss_pred EEEEEeeeEeCCC------ceEEEEEEEEe-CCeEEEEEEecC
Q 022429 247 WVTMKTYIDIDTG------PFNMTNVFEFH-NGQWYMVHHHSS 282 (297)
Q Consensus 247 vv~~~e~v~~~~g------~lraT~VfrR~-dG~WrlvhhHaS 282 (297)
++....++...+. .+....+||-. +| ||+.++.-
T Consensus 81 ~~~~~~~~~~~g~~~g~~v~~~gi~v~r~d~dG--kI~~~rdy 121 (283)
T 3rga_A 81 VLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDG--LIREMRVM 121 (283)
T ss_dssp EEEEEEEECSTTCCGGGCEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred EEEEEEEEEeCCCCccceEEEEEEEEEEECCCC--cEEEEEEE
Confidence 8887766653332 26889999995 66 57776543
No 82
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=97.97 E-value=6.5e-05 Score=69.06 Aligned_cols=112 Identities=11% Similarity=0.018 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT 243 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g 243 (297)
+...++++++.++|+++++++|++++.++|++|. +...| +.+.+.|+++|++.|+..+... ....+.+..+...|
T Consensus 134 ~~~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~--v~~~P~~~~~~~G~~ai~~~~~~~~~~~--~~~~~~~~~~~~~g 209 (283)
T 3rga_A 134 APDEERRKELAREHCLRINDGDVDGLLKLYSPRI--RFEDPVGSWTRTGLEALRAHATMAVGSN--VRETAGLTVAGQDG 209 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEESSTTSCEEESHHHHHHHHHHHHHTT--CEEEEEEEEECTTS
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHhcCCCe--EEECCCCCCcccCHHHHHHHHHHhhccC--cEEEEeeEEecCCC
Confidence 3567789999999999999999999999999994 33455 3457899999999999888762 22222222112468
Q ss_pred CEEEEEEEeeeE------------------e--CCC---ceEEEEEEEEe-CCeEEEEEEecC
Q 022429 244 DIAWVTMKTYID------------------I--DTG---PFNMTNVFEFH-NGQWYMVHHHSS 282 (297)
Q Consensus 244 DvAvv~~~e~v~------------------~--~~g---~lraT~VfrR~-dG~WrlvhhHaS 282 (297)
+.|++...-+.. . .+| .+....+|+-. +| ||+.|..-
T Consensus 210 ~~aa~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~~~~~~dG--kI~~~r~y 270 (283)
T 3rga_A 210 RHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDADG--LIDEMRAY 270 (283)
T ss_dssp SEEEEEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred CEEEEEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEEEEECCCc--cEEEEEEe
Confidence 888888777665 0 123 26778889985 67 67777554
No 83
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.85 E-value=4.3e-06 Score=81.46 Aligned_cols=45 Identities=9% Similarity=0.135 Sum_probs=34.3
Q ss_pred cchhhcccHHHHHHHhcCCC-hhhHhhhhccChHHHHHcCCchhhhhh
Q 022429 97 ASMMEQLVPEITTHALSYLD-YPSLCRLSMTNSLMRKAANDDNAWKAL 143 (297)
Q Consensus 97 ~~~l~~LP~Eil~~IlsyLd-~~sL~~~s~vcr~~~~~a~d~~lWr~l 143 (297)
.+.++.||+||+.+||+||+ .+|+.+++.|||+|+++ +...|+++
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~--~~~~~~~l 48 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI--ERWCRRKV 48 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH--HHHHCCEE
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh--hhhhceEE
Confidence 46788999999999999999 99999999999999999 45566655
No 84
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=97.80 E-value=0.00021 Score=69.09 Aligned_cols=116 Identities=16% Similarity=0.279 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC--CCCCCCCHHHHHHHHHHHhc-cCCCceeEEEEeEEEEeC
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA--SGELFSGYNSVIQSWQIAFN-WEQGVDFQVQDVRARVLT 243 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP--gg~~l~Gr~aVr~sW~~if~-~~~~~~vei~dl~V~v~g 243 (297)
...++....+.|.+++..||.+....+-.++ +++..| -|..+.|.+-.+--++...+ .......++-+.+|++.|
T Consensus 316 ~~~e~~~~~~~~l~~i~~gD~~~y~~l~~~~--~t~fep~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~p~v~~~~ 393 (444)
T 3soa_A 316 RKQEIIKVTEQLIEAISNGDFESYTKMCDPG--MTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMG 393 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSHHHHHHEEEE--EEEECGGGTTCEEEHHHHTHHHHHHTSTTCSSCCEEEEEEEEEEEET
T ss_pred chHHHHHHHHHHHhhhhcCCchhhcccCCCC--CCccCcccccccccCcchhhhhhhcccccCCCcceEeecCCceEEec
Confidence 4466788889999999999999998887766 677776 35567787766665555433 334567889999999998
Q ss_pred CE-EEEEEEeee-EeC--CCc----eEEEEEEEEeCCeEEEEEEecCCC
Q 022429 244 DI-AWVTMKTYI-DID--TGP----FNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 244 Dv-Avv~~~e~v-~~~--~g~----lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
|. |++++.-.. ..+ |++ ..=|.||.|.+|+|+.||.|-|..
T Consensus 394 ~~~a~~~y~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~w~~~h~h~~~~ 442 (444)
T 3soa_A 394 DESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGA 442 (444)
T ss_dssp TTEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred CcceeeeeeeeeeeeccCCCccccchhhheeeeecCCceEEEEEecCCC
Confidence 75 777776332 222 322 355999999999999999999853
No 85
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=97.80 E-value=0.00025 Score=59.39 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC-CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEE
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS-GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAW 247 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg-g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAv 247 (297)
.+++++.++|++|+++||++++.++|++|. +...|. ..++.|+++|++.|...+... ..+++.. ..+.||-++
T Consensus 20 ~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dv--v~~~P~~~~~~~G~~av~~~~~~~~~~~--~~f~~~~--~~~~g~~~~ 93 (148)
T 3f8x_A 20 AAVQSGLQEWHRIIAEADWERLPDLLAEDV--VFSNPSTFDPYHGKGPLMVILPAVFSVL--ENFQYAR--HFSSKSGYV 93 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGSGGGEEEEE--EEECSSCSSCEESHHHHHHHHHHHHHHC--EEEEEEE--EEECSSEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhCCCE--EEECCCCCCCcCCHHHHHHHHHHHHhhC--CCEEEEE--EEEeCCeEE
Confidence 567888999999999999999999999994 334453 457899999999999888654 2444433 556677665
Q ss_pred EEEEeeeEeCCCceEEEEEEEEe-CC
Q 022429 248 VTMKTYIDIDTGPFNMTNVFEFH-NG 272 (297)
Q Consensus 248 v~~~e~v~~~~g~lraT~VfrR~-dG 272 (297)
+...... ++..+....+++-. ||
T Consensus 94 l~f~~~~--~g~~v~Gvdvl~~d~dG 117 (148)
T 3f8x_A 94 LEFNANM--GDELLTGVDLIEFNDAG 117 (148)
T ss_dssp EEEEEEE--TTEEEEEEEEEEECTTS
T ss_pred EEEEEEE--CCEEEEEEEEEEECCCC
Confidence 5544332 23346667777774 56
No 86
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=97.74 E-value=0.00013 Score=61.99 Aligned_cols=95 Identities=6% Similarity=-0.002 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEE
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVT 249 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~ 249 (297)
..++.++|++|+++||++++.+++++|. +...| ...++.|+++|++.|..++...+ .++++ ...+.|+-+++.
T Consensus 20 ~~~~v~~f~~A~~~gD~~aL~~LlA~Dv--v~~sP~~~~p~~Gr~av~~~l~~~~~~~~--df~~~--~~~v~G~~avl~ 93 (155)
T 3flj_A 20 MHPTIARMQEVVAKGDESLIHALLAEDV--RFMPPTYYKTWTGRDPVAAVLGHVGQVFS--EFRYR--RIMGEGKDWALE 93 (155)
T ss_dssp CCHHHHHHHHHHTTTCHHHHHTTEEEEE--EEECSSSSCCEESHHHHHHHHHHHHHHEE--EEEEE--EEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHhCCHHHHHHhcCCCE--EEECCCCCCCcCCHHHHHHHHHHHHhhCC--CcEEE--EEEEcCCEEEEE
Confidence 3457889999999999999999999994 43445 45678999999999988776432 33332 344789977776
Q ss_pred EEeeeEeCCCceEEEEEEEE-eCCe
Q 022429 250 MKTYIDIDTGPFNMTNVFEF-HNGQ 273 (297)
Q Consensus 250 ~~e~v~~~~g~lraT~VfrR-~dG~ 273 (297)
...++ ++..+....+++- +||.
T Consensus 94 f~~~~--~g~~v~gvd~~~fdedGk 116 (155)
T 3flj_A 94 FQCKV--GELDAVGVDLITLNEGGL 116 (155)
T ss_dssp EEEEE--TTEEEEEEEEEEECTTSS
T ss_pred EEEEE--CCEEEEEEEEEEEcCCCC
Confidence 55433 3445677788887 4664
No 87
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=97.68 E-value=0.00038 Score=55.41 Aligned_cols=104 Identities=10% Similarity=0.117 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHhCChh----hhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 170 AVVNVNAEFFNIIRERSLP----AMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 170 aI~aa~~aFy~A~~agDld----am~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
.++++.++|+++++++|.+ ++.++|++| +++..|.++ +.|+++|++.+...++..++..+++.. .+...++.
T Consensus 4 ~~~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D--~~~~dP~~~-~~G~~ai~~~~~~~~~~~~~~~f~~~~-~~~~~~~~ 79 (121)
T 3dxo_A 4 QHLTIAQTYLAAWNEEDNERRRHLVGQAWAEN--TRYVDPLMQ-GEGQQGIAAMIEAARQKFPGYRFVLAG-TPDGHGNF 79 (121)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHEEEE--EEEECSSCE-EEHHHHHHHHHHHHHHHSTTCEEEEEE-EEEEETTE
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCC--eEEECCCCC-cCCHHHHHHHHHHHHHHCCCcEEEEcc-CcceeCCE
Confidence 5778899999999999985 799999999 555677664 899999999998888766555555541 46677887
Q ss_pred EEEEEEeeeEeCCCc--eEEEEEEEEe-CCeEEEEEEec
Q 022429 246 AWVTMKTYIDIDTGP--FNMTNVFEFH-NGQWYMVHHHS 281 (297)
Q Consensus 246 Avv~~~e~v~~~~g~--lraT~VfrR~-dG~WrlvhhHa 281 (297)
+.....- ...+|. +....+++-. +| ||+.+..
T Consensus 80 ~~~~w~~--~~~~g~~~~~G~d~l~~~~dG--rI~~~~~ 114 (121)
T 3dxo_A 80 TRFSWRL--ISPDGDDVAGGTDVVSLNTEG--RIDNVVG 114 (121)
T ss_dssp EEEEEEE--ECTTSCEEEEEEEEEEECTTS--SEEEEEE
T ss_pred EEEEEEE--eCCCCCceeeEEEEEEECCCC--CEEEEEE
Confidence 6555432 222333 5667788887 66 4555443
No 88
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=97.60 E-value=0.00056 Score=55.45 Aligned_cols=97 Identities=9% Similarity=0.088 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTM 250 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~ 250 (297)
.+..++-.+|+.+||++.|.+.|++|. +.+-| .++.+.|+++++..+..+.+.- +..++|+.+++...|+..+-..
T Consensus 5 ~~iVqrlW~al~AgD~D~l~adyaeDa--V~i~P~sa~vl~GR~~~r~a~~~L~~~l-P~g~~It~lR~i~ggn~VVSev 81 (120)
T 3lyg_A 5 ANIVQRGWEALGAGDFDTLVTDYVEKM--IFIMPGQADVLKGRQAFRSALDNLGEIL-PPGFEITGLRQLEGENEIVSIV 81 (120)
T ss_dssp HHHHHHHHHHHHHTCHHHHGGGEEEEE--EEECSSTTCEEESHHHHHHHHTTHHHHS-CTTCEEEEEEEEECSSEEEEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcccCe--EEEccCccceeecHHHHHHHHHHHHhhC-CCCceeeeEEEecCCCEEEEEE
Confidence 456778889999999999999999994 44666 4668999999999776666543 2357899999999999654433
Q ss_pred EeeeEeCC-CceEEEEEEEEeCCe
Q 022429 251 KTYIDIDT-GPFNMTNVFEFHNGQ 273 (297)
Q Consensus 251 ~e~v~~~~-g~lraT~VfrR~dG~ 273 (297)
...- ++ +..++...|.-++|+
T Consensus 82 e~~~--~~~~~~~~~~lf~f~~g~ 103 (120)
T 3lyg_A 82 EWKS--DKMIASQLSVLFKFEGDQ 103 (120)
T ss_dssp EEEE--TTEEEEEEEEEEEEETTE
T ss_pred EEcC--CCeeeEEEEEEEEEECCE
Confidence 3221 11 236778888888773
No 89
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=97.55 E-value=0.0029 Score=53.26 Aligned_cols=115 Identities=10% Similarity=-0.080 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCC-------------C---CCCCHHHHHHHHHHHhcc----
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASG-------------E---LFSGYNSVIQSWQIAFNW---- 226 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg-------------~---~l~Gr~aVr~sW~~if~~---- 226 (297)
...+|.++..++..++..+|.+...++|++|... ..|.+ . ...|++.+++.-..+...
T Consensus 11 ~~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y--~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~~~~~~~ 88 (172)
T 2b1x_B 11 TVREITEWLYMEAELLDAGKYREWLALVTEDLSY--VVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLETEYAWA 88 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEE--EEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHTSSCCGG
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHhccCCEEE--EEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHhcCcccc
Confidence 5578999999999999999999999999999543 22211 0 113788887754444321
Q ss_pred --C-CCceeEEEEeEEEEeC--CEEEEEEEeeeEe--CCC---c---eEEEEEEEEeCCeEEEEEEecCC
Q 022429 227 --E-QGVDFQVQDVRARVLT--DIAWVTMKTYIDI--DTG---P---FNMTNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 227 --~-~~~~vei~dl~V~v~g--DvAvv~~~e~v~~--~~g---~---lraT~VfrR~dG~WrlvhhHaSp 283 (297)
+ ......+..+.|.+.+ |.|.+.+...+.. .++ . -++...|+|.+|+|||.......
T Consensus 89 ~~p~~~t~H~i~n~~I~~~~~~d~a~~~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~g~Wri~~R~v~l 158 (172)
T 2b1x_B 89 EDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLL 158 (172)
T ss_dssp GSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEECTTCSCCEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCeEEEEecCEEEEEecCCCEEEEEEEEEEEEEcCCCCceEEEEEEEEEEEEEcCCEEEEEEEEEEE
Confidence 1 1234567888888866 7888776655432 233 1 26788999999999999987643
No 90
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=97.46 E-value=0.00047 Score=59.48 Aligned_cols=116 Identities=5% Similarity=0.003 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC--CCC--CCCCHHHHHHHHHH--HhccC-CCceeEEEEe
Q 022429 165 YAATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA--SGE--LFSGYNSVIQSWQI--AFNWE-QGVDFQVQDV 237 (297)
Q Consensus 165 Y~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP--gg~--~l~Gr~aVr~sW~~--if~~~-~~~~vei~dl 237 (297)
+.+..+|+++..+|.+++-++|.+.+.+++++|..+ -++ ++. ...+++++.+.|.. .+... ......+...
T Consensus 13 l~d~~~I~~l~~rY~Ra~DtkDwd~lr~~fapd~~~--Dy~~~~~~~~~~~~~d~~v~~~~~~~~Lg~~~~~tqH~~~~~ 90 (172)
T 1idp_A 13 FSDYLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRI--DYRSFLDKLWEAMPAEEFVGMVSSKQVLGDPTLRTQHFIGGT 90 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEE--ECHHHHSCEEEEEEHHHHHHHHHSTTTTCCTTEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHhCCCEEE--EcccccCcccccCCHHHHHHHHhhhhhcCCCCcceEEccCCe
Confidence 447788999999999999999999999999998533 232 121 34568888887764 33322 1234667888
Q ss_pred EEEEeCC-EEEEEEEeeeEe------CCC-c---------eEEEEEEEEeCCeEEEEEEecCCC
Q 022429 238 RARVLTD-IAWVTMKTYIDI------DTG-P---------FNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 238 ~V~v~gD-vAvv~~~e~v~~------~~g-~---------lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
.+.+.+| .+.. ...+.. ++. . -.++.-|+|++|+|||.+......
T Consensus 91 ~ie~~~dt~a~g--~~~~~~~~~~y~d~~~~~~~~~ghg~G~Y~~~Y~r~dG~WkIa~~~~~~~ 152 (172)
T 1idp_A 91 RWEKVSEDEVIG--YHQLRVPHQRYKDTTMKEVTMKGHAHSANLHWYKKIDGVWKFAGLKPDIR 152 (172)
T ss_dssp EEEEEETTEEEE--EEEEEEEEEEESSTTCCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEecCCeEEE--EEEEEEcccccccccccceeecccccccceEEEEEECCEEEEEEEEEEEE
Confidence 8886665 4443 222211 211 1 246779999999999998876543
No 91
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=97.42 E-value=0.0072 Score=51.21 Aligned_cols=115 Identities=5% Similarity=-0.059 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhh-hhhccCCceeeecCCCCC------------------CCCHHHHHHHHHHHhcc-
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMS-RFWLNADYVKCIHASGEL------------------FSGYNSVIQSWQIAFNW- 226 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~-alWaddd~V~cvhPgg~~------------------l~Gr~aVr~sW~~if~~- 226 (297)
...+|.+...++..++..+|.+... ++|++|... ..|.+.. ..|++.+++....+...
T Consensus 12 ~~~~I~~~l~rya~~lD~~d~d~w~~~lfteD~~y--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~ 89 (174)
T 2gbw_B 12 VHYDIEAHYRAEVRMFQTGQYREWLQGMVAEDIHY--WMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQ 89 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEE--EEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHhhccCCEEE--EeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhcCC
Confidence 4567999999999999999999999 999999533 2332111 24677777755554432
Q ss_pred ----CC--CceeEEEEeEEEE-eCCEEEEEEEeeeEe--CCCc-----eEEEEEEEEeCCeEEEEEEecCC
Q 022429 227 ----EQ--GVDFQVQDVRARV-LTDIAWVTMKTYIDI--DTGP-----FNMTNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 227 ----~~--~~~vei~dl~V~v-~gDvAvv~~~e~v~~--~~g~-----lraT~VfrR~dG~WrlvhhHaSp 283 (297)
.+ .....+..+.|.. .||.|.+.....+.. .++. -++...|+|.+|+|||.......
T Consensus 90 ~~~~~p~~rt~H~isN~~i~~~~~~~a~v~s~~~~~~~~~~~~~~~~~G~y~D~l~r~~~~wri~~R~v~l 160 (174)
T 2gbw_B 90 VWMEDPPSKIRYFVSNVEAFEAGNGELDVLSNILVYRNRRQTEVTVHTLGREDKLRRDGNGFKVFRRKLIL 160 (174)
T ss_dssp CGGGSSCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCCceEEEecCEEEEEcCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEEcCCEEEEEEEEEEE
Confidence 11 2245577777876 678777766544432 2331 26788999999999999987643
No 92
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=97.38 E-value=0.0032 Score=52.81 Aligned_cols=115 Identities=10% Similarity=0.017 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC------CCC-----CCCHHHHHHHHHHHhcc---C-CCc
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS------GEL-----FSGYNSVIQSWQIAFNW---E-QGV 230 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg------g~~-----l~Gr~aVr~sW~~if~~---~-~~~ 230 (297)
....+|.++..++..++..+|.+...++|++|... ..|. +.. ..|++.+++....+... + ...
T Consensus 11 ~~~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y--~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~p~~rt 88 (163)
T 3eby_A 11 VAQSAIDDFNAAYGLCLDDDRLEQWPTLFVDDCLY--QVIARENVDNGLPAAVMYCDSKGMLADRVVALRKANVFPEHFN 88 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGTGGGEEEEEEE--EEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHHHTC----CEE
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHhhcCCEEE--EeeccccCCCCCCcEEEEcCCHHHHHHHHHHhhccCCCCCcce
Confidence 45678999999999999999999999999999533 2221 111 14788887765554431 1 122
Q ss_pred eeEEEEeEE-EEeCCEEEEEEEeeeEe--CCCc------eEEEEEEEEeCCeEEEEEEecC
Q 022429 231 DFQVQDVRA-RVLTDIAWVTMKTYIDI--DTGP------FNMTNVFEFHNGQWYMVHHHSS 282 (297)
Q Consensus 231 ~vei~dl~V-~v~gDvAvv~~~e~v~~--~~g~------lraT~VfrR~dG~WrlvhhHaS 282 (297)
...+..+.| ...||.|.+.....+.. .++. -++...|+|.+|+|||......
T Consensus 89 ~H~vsn~~i~~~~~d~a~v~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~~gwri~~R~v~ 149 (163)
T 3eby_A 89 RHLIGRAVITGVEGDQVSAEASYVVFQTRNDGETRIYNAGKYVDRFDLSGGTVRLKSRTCI 149 (163)
T ss_dssp EEEECCCEEEEEETTEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECCTTCCEEEEEEEE
T ss_pred eEEEcCEEEEecCCCEEEEEEEEEEEEEcCCCccEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 345667777 56788888876654432 2232 2678899999999999998754
No 93
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=97.29 E-value=0.0021 Score=56.16 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeec-CCC-C-CCCCHHHHHHHHHHHhccCCCceeEEEEeEEEE--eC
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIH-ASG-E-LFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARV--LT 243 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvh-Pgg-~-~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v--~g 243 (297)
+..+++.++|++++.+ |.+.+..+|++|....... |.| + .+.|+++|++.+..+++..+. .++..+++.. .+
T Consensus 41 ~~nr~vV~~yl~~~~~-D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d--~~~~~~~v~~taDp 117 (185)
T 3jum_A 41 QHNRKIVEQYMHTRGE-ARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPD--WVWTDIQIFETQDP 117 (185)
T ss_dssp HHHHHHHHHHHHCCGG-GGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTT--CEEEEEEEECCSST
T ss_pred HHHHHHHHHHHHHhcc-CHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCC--CeeeEEEEEEecCC
Confidence 4466677788888776 9999999999996443321 222 2 378999999998887765433 5566666654 57
Q ss_pred CEEEEEEEeeeEe-CCC-c-----eEEEEEEEEeCCeEEE
Q 022429 244 DIAWVTMKTYIDI-DTG-P-----FNMTNVFEFHNGQWYM 276 (297)
Q Consensus 244 DvAvv~~~e~v~~-~~g-~-----lraT~VfrR~dG~Wrl 276 (297)
|++++.+...... .+| + ..+..||+-+||+-.-
T Consensus 118 d~VvvE~~~~Gtv~~TGkp~~~Y~~~yi~V~rVrDGKIv~ 157 (185)
T 3jum_A 118 NWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKE 157 (185)
T ss_dssp TEEEEEEEEEEEECCTTSCCEEEEEEEEEEEEEETTEEEE
T ss_pred CEEEEEEEEEEEEcCCCCccceEEEeEEEEEEEECCEEEE
Confidence 7888877755433 233 2 4567788889996443
No 94
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.08 E-value=0.00021 Score=69.51 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=31.6
Q ss_pred hcccHHHHHHHhcCC-ChhhHhhhhccChHHHHH
Q 022429 101 EQLVPEITTHALSYL-DYPSLCRLSMTNSLMRKA 133 (297)
Q Consensus 101 ~~LP~Eil~~IlsyL-d~~sL~~~s~vcr~~~~~ 133 (297)
..||+|++.+||+|| +.+|+.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999998
No 95
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=97.05 E-value=0.00066 Score=53.63 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=40.3
Q ss_pred cccHHHHHHHhcCCChhhHhhhhccChHHHHHcCCchhhhhhhccccccccCCcCCCCChhHHHHHHHH
Q 022429 102 QLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVIPVNGWKAYYAATRA 170 (297)
Q Consensus 102 ~LP~Eil~~IlsyLd~~sL~~~s~vcr~~~~~a~d~~lWr~l~~~~~~~~~~~~~~~~~WKelY~~t~a 170 (297)
-.|-+||.-||...++.+|.++-.-|..+ .-.+|.||++++.++|+... +....+||++|.....
T Consensus 12 ~~Py~lL~PVLek~tp~QL~~IE~~nP~L--~~dTdeLWk~~c~rdF~~~~--p~e~esWRelY~rl~~ 76 (97)
T 4hfx_A 12 GVPYSVLEPVLERCTPDQLYRIEEYNHVL--IEETDQLWKVHCHRDFKEER--PEEYESWREMYLRLQD 76 (97)
T ss_dssp --------CCGGGCCHHHHHHHHTC--------CCHHHHHHHC----CCSC--CCSSSCHHHHHHHHHH
T ss_pred CCcHHHHHHHHccCCHHHHHHHHHhCccc--chhhHHHHHHHHHhHCcccC--CCCCCCHHHHHHHHHH
Confidence 36889999999999999999999988844 45789999999999999642 3557799999998543
No 96
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus}
Probab=96.85 E-value=0.011 Score=48.64 Aligned_cols=108 Identities=11% Similarity=0.094 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeE----EEEeEEEEe
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQ----VQDVRARVL 242 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~ve----i~dl~V~v~ 242 (297)
..++|.++++.|..+=.-++. +..--.+ +...|.|.|.+++ .+...+. ...+. +.++ +...++.+.
T Consensus 4 ~~~~i~~l~~~fa~~~~~~~f--~~~n~hd--DflFIrPsGnpIt-kegd~~m----~~Sgd-lv~e~~el~ki~~le~~ 73 (131)
T 3hzp_A 4 SKEEILSILEAFASTERMGSF--FLDNATA--DFLFIRPSGNPLD-AKGFENM----WSSGD-LVLESAEITKVHKFELL 73 (131)
T ss_dssp HHHHHHHHHHHHSSTTTTTTH--HHHHBCT--TCCEECTTSCEEC-HHHHHHH----HTSSS-EEEEEEEEEEEEEEEES
T ss_pred hHHHHHHHHHHhhCHhhhhhh--hhccCCc--ceEEEcCCCCccc-hhhhHHh----hcCCC-EEEEeecccceeeEEEc
Confidence 356777777777544222221 1112222 3667899998776 4444443 33332 2222 334556667
Q ss_pred CC-EEEEEEEeee--EeCC----CceEEEEEEEEeCCeEEEEEEecCCC
Q 022429 243 TD-IAWVTMKTYI--DIDT----GPFNMTNVFEFHNGQWYMVHHHSSVM 284 (297)
Q Consensus 243 gD-vAvv~~~e~v--~~~~----g~lraT~VfrR~dG~WrlvhhHaSp~ 284 (297)
+| +|++...-.. .-.| +..++|.||.|.||+|++.--|-|..
T Consensus 74 ~dt~A~v~~t~~~kfsYkG~pned~~~YtrVwKK~d~~WKi~w~qrs~g 122 (131)
T 3hzp_A 74 GSNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSG 122 (131)
T ss_dssp SSSEEEEEEEEEEEEEETTEEEEEBCEEEEEEEEETTEEEEEEEEECCS
T ss_pred CCceEEEEEEecceEEEcCccCCcceeeehhhhhcCCcEEEEEEEecCC
Confidence 77 4887665443 3233 45799999999999999999998754
No 97
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=96.50 E-value=0.0095 Score=50.99 Aligned_cols=105 Identities=10% Similarity=0.189 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCc---eeeecCCC-CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC--E
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADY---VKCIHASG-ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD--I 245 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~---V~cvhPgg-~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD--v 245 (297)
+++.++|++. ..+|.+++..+|++|.. .. ..++. ..+.|+++|++.+..++...+ .+++.++++...+| +
T Consensus 22 r~vV~~~l~~-~~~D~~~~~~LfAeD~v~~~~e-~~~G~P~~~~Gre~l~~~~~~~~~~~~--~~~~~~~~i~~t~Dpd~ 97 (163)
T 3ff0_A 22 RETVVKYMNT-KGQDRLRRHELFVEDGCGGLWT-TDTGSPIVIRGKDKLAEHAVWSLKCFP--DWEWYNIKVFETDDPNH 97 (163)
T ss_dssp HHHHHHHHTC-CGGGGGGGGGGEEEEEEEEESS-CSSSSCEEEESHHHHHHHHHHHHHHST--TCEEEEEEEEEBSSTTE
T ss_pred HHHHHHHHHH-hcCCHHHHHHhcCCcccceeeE-ECCCCCcceecHHHHHHHHHHHHhhCC--CceeeeEEEEEcCCCCE
Confidence 4455667743 46899999999999954 32 22332 347899999998877766543 35677777776655 8
Q ss_pred EEEEEEeeeEe--CCCc---e--EEEEEEEEeCCeEEEEEEe
Q 022429 246 AWVTMKTYIDI--DTGP---F--NMTNVFEFHNGQWYMVHHH 280 (297)
Q Consensus 246 Avv~~~e~v~~--~~g~---l--raT~VfrR~dG~WrlvhhH 280 (297)
.++.+...... .|.+ . .+..+|+-+||+=.-....
T Consensus 98 vvvE~~~~g~i~~tG~~~~~y~~~yi~v~~vrdGkI~~~ReY 139 (163)
T 3ff0_A 98 FWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREF 139 (163)
T ss_dssp EEEEEEEEEEECCTTSCCEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEEEEcCCCcccccEEEeEEEEEEEeCCEEEEEEee
Confidence 88777755443 3434 3 5667888889964444333
No 98
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=96.35 E-value=0.14 Score=43.88 Aligned_cols=116 Identities=3% Similarity=-0.108 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCC-------------------CCCHHHHHHHHHHHhcc
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGEL-------------------FSGYNSVIQSWQIAFNW 226 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~-------------------l~Gr~aVr~sW~~if~~ 226 (297)
....+|.+....+.+++..+|.+...++|++|... ..|.+.. ..|++.++.....+...
T Consensus 21 ~~~~eI~~~l~r~A~lLD~~d~d~w~~lfteD~~y--~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~~~ 98 (187)
T 1uli_B 21 SLQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHY--FMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKITSD 98 (187)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEE--EEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHcccCEEE--EeeccccccccccccccCCccceeeecCCHHHHHHHHHHHhcc
Confidence 35667999999999999999999999999999543 3332211 13566676655544431
Q ss_pred -----CC--CceeEEEEeEEEEe--CCEEEEEEEeeeEe--CCCc--e---EEEEEEEEeCC--eEEEEEEecCC
Q 022429 227 -----EQ--GVDFQVQDVRARVL--TDIAWVTMKTYIDI--DTGP--F---NMTNVFEFHNG--QWYMVHHHSSV 283 (297)
Q Consensus 227 -----~~--~~~vei~dl~V~v~--gDvAvv~~~e~v~~--~~g~--l---raT~VfrR~dG--~WrlvhhHaSp 283 (297)
.+ .....+..+.|... ||.+.+.....+.. .++. + .....++|.+| +|||.......
T Consensus 99 ~~~a~~p~~rtrH~isNv~V~~~~~~d~a~vrs~~~~~~~r~~~~~~~~~g~r~D~l~r~~~~~gwri~~R~v~l 173 (187)
T 1uli_B 99 VSWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIFAGERKDILRRTGSEAGFELAKRTILI 173 (187)
T ss_dssp TCGGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSSTTCEEEEEEEEEE
T ss_pred cccccCCCCceEEEecCEEEEEeCCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEECCCccceEEEEEEEEE
Confidence 11 22455778888873 57887776655432 2331 1 22488999999 99999987643
No 99
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=96.05 E-value=0.28 Score=41.93 Aligned_cols=116 Identities=8% Similarity=-0.076 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCC-------------C------CCCHHHHHHHHHHHhcc
Q 022429 166 AATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGE-------------L------FSGYNSVIQSWQIAFNW 226 (297)
Q Consensus 166 ~~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~-------------~------l~Gr~aVr~sW~~if~~ 226 (297)
....+|.+....+.+++..+|.+...++|++|.... .|... . ..|++.++..-..+...
T Consensus 20 ~~~~eI~~~l~r~A~lLD~~d~~~w~~lfteD~~y~--~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~Rv~rl~~~ 97 (186)
T 1wql_B 20 ELQNAVEQFYYREAQLLDYQNYEAWLALLTQDIQYW--MPIRTTHTSRNKAMEYVPPGGNAHFDETYESMRARIRARVSG 97 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHTTBCTTCCEE--EECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHcCcCHHHHHHHhhCCEEEE--eeccccccccccccccCCccceEEEeCCHHHHHHHHHHHhcC
Confidence 356779999999999999999999999999996542 23210 1 13455655544433321
Q ss_pred -----CC--CceeEEEEeEEEEe--CCEEEEEEEeeeEe--CCCc--e---EEEEEEEEeCC--eEEEEEEecCC
Q 022429 227 -----EQ--GVDFQVQDVRARVL--TDIAWVTMKTYIDI--DTGP--F---NMTNVFEFHNG--QWYMVHHHSSV 283 (297)
Q Consensus 227 -----~~--~~~vei~dl~V~v~--gDvAvv~~~e~v~~--~~g~--l---raT~VfrR~dG--~WrlvhhHaSp 283 (297)
.+ .....+..+.|... ||.+.+.....+.. .++. + .....++|.+| +|||.......
T Consensus 98 ~~~a~~p~~rtrH~isNv~v~~~~~~d~~~v~s~~~~~~~r~~~~~~~~~g~r~D~l~r~~~~~~wri~~R~v~l 172 (186)
T 1wql_B 98 LNWTEDPPSRSRHIVSNVIVRETESAGTLEVSSAFLCYRNRLERMTDIYVGERRDILLRVSDGLGFKIAKRTILL 172 (186)
T ss_dssp CCGGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSSTTSEEEEEEEEEE
T ss_pred cccccCCCCceEEEecCEEEEEecCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEECCCccceEEEEEEEEE
Confidence 11 22455778888876 67887776655432 2331 1 22488999999 99999987643
No 100
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=95.96 E-value=0.023 Score=53.18 Aligned_cols=113 Identities=10% Similarity=0.080 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEE---eCCEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARV---LTDIAWV 248 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v---~gDvAvv 248 (297)
.....+|+++++++|++++.+++++|..+ -.|-++++.|+++|..-++.-..+ +.+..+.--... +++-+-+
T Consensus 195 ~~tVl~Y~e~lNa~Df~a~aaLFA~Dg~L--epPf~~PIvGreAI~~y~~~eaq~---~~l~P~~g~~ep~e~g~~qi~v 269 (323)
T 3mg1_A 195 NATVLNYMDNLNANDFDTLIELFTSDGAL--QPPFQRPIVGKENVLRFFREECQN---LKLIPERGVTEPAEDGFTQIKV 269 (323)
T ss_dssp CHHHHHHHHHHHTTCHHHHHTTEEEEEEE--ECTTSCCEESHHHHHHHHHHHCTT---CEEEEEEEEEEECGGGCEEEEE
T ss_pred hHHHHHHHHHhcccCHHHHHHHccCCCee--CCCCCCCccCHHHHHHHHHHHhcc---CEEeeccCccccccCCCceEEE
Confidence 34678899999999999999999999655 677789999999999976644433 455554422222 3345556
Q ss_pred EEEeeeEeCCC--ceEEEEEEEEe-CCeEEEEEEecCCCCCCCccc
Q 022429 249 TMKTYIDIDTG--PFNMTNVFEFH-NGQWYMVHHHSSVMLVDGEVE 291 (297)
Q Consensus 249 ~~~e~v~~~~g--~lraT~VfrR~-dG~WrlvhhHaSp~~~~~~~~ 291 (297)
+|+-+..--|. .++++..|+.. +|+=.-|+ -.....++++-
T Consensus 270 tGkVqTpwfGv~v~mnVaW~F~lN~~gkI~~v~--i~LLAS~~ELl 313 (323)
T 3mg1_A 270 TGKVQTPWFGGNVGMNIAWRFLLNPEGKIFFVA--IDLLASPKELL 313 (323)
T ss_dssp EEEEECTTTGGGCCEEEEEEEEECTTSCEEEEE--EEEBSSTTC--
T ss_pred EEEEEcccCCccccccceeEEEECCCCcEEEEE--ehhhcCHHHHH
Confidence 66654321122 36888888884 56544433 33333444443
No 101
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=95.66 E-value=0.33 Score=40.88 Aligned_cols=115 Identities=6% Similarity=-0.062 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCC--------C--------CCCHHHHHHHHHHHh------
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGE--------L--------FSGYNSVIQSWQIAF------ 224 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~--------~--------l~Gr~aVr~sW~~if------ 224 (297)
...+|.+....+..++..+|.+....+|++|.. +..|..+ + ..++..++..-..+.
T Consensus 6 ~~~~i~~~l~~~a~~lD~~~~~~w~~lf~~D~~--Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~~~~~~~ 83 (164)
T 3e99_A 6 DLADIQAFLYRESRLLDDKAWDAWLDCYRADAV--FWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSA 83 (164)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEEECCCC-----------CEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhccccHHHHHHhcCCCEE--EEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHhCccccc
Confidence 346788999999999999999999999999953 3333321 1 245555544322221
Q ss_pred ccCC-CceeEEEEeEEE-EeCCEEEEEEEeeeEe--CCC-c---eEEEEEEEEeCCeEEEEEEecCC
Q 022429 225 NWEQ-GVDFQVQDVRAR-VLTDIAWVTMKTYIDI--DTG-P---FNMTNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 225 ~~~~-~~~vei~dl~V~-v~gDvAvv~~~e~v~~--~~g-~---lraT~VfrR~dG~WrlvhhHaSp 283 (297)
..++ .....+..+.|. ..++.+-+.+...+.. .++ . -+.+.+++|.+|+|||....-..
T Consensus 84 ~~p~~rtrH~vsnv~v~~~~~~~~~v~s~~~v~~~r~~~~~~~~G~~~d~L~r~~~~wri~~R~v~l 150 (164)
T 3e99_A 84 TVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVL 150 (164)
T ss_dssp CSSCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred cCCCceEEEEEeCEEEEEeCCCEEEEEEEEEEEEECCCCeEEEEEEEEEEEEEECCEEEEEEEEEEE
Confidence 1221 224557777775 4577777766655432 222 1 26788999999999999987654
No 102
>2jq5_A SEC-C motif; structural genomics, PSI-2, structure initiative, northeast structural genomics consort NESG; NMR {Rhodopseudomonas palustris}
Probab=95.53 E-value=0.24 Score=40.71 Aligned_cols=92 Identities=9% Similarity=0.094 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTMK 251 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~~ 251 (297)
.++....|.||..||++-+.+-|.++ ..|.. .++.+. .|..-..|. .++ .++...+++-++|.-.
T Consensus 29 E~LMRSRYsAyv~~~~dYL~~T~hP~-----~r~~~----~~~~~~-~~~~~~~W~---gL~--I~~~~~g~~~g~VeF~ 93 (128)
T 2jq5_A 29 EALMRSRYAAYALKDFDYIVETTDPE-----RRDLF----DHDVNR-AWMEESDFL---ELR--VLGSSEKGSRGTVEFI 93 (128)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTBCHH-----HHTTC----CHHHHH-HHHHHEEEE---EEE--EEEEEEETTEEEEEEE
T ss_pred HHHHhhhceeeecCCcchhhhhcCcc-----cCCcc----chHHHH-hhCcCCeee---eeE--EEEEecCCCCEEEEEE
Confidence 56788999999999999999999666 12321 234444 343323332 233 3333343433888888
Q ss_pred eeeEeCCCc---eEEEEEEEEeCCeEEEEE
Q 022429 252 TYIDIDTGP---FNMTNVFEFHNGQWYMVH 278 (297)
Q Consensus 252 e~v~~~~g~---lraT~VfrR~dG~Wrlvh 278 (297)
.+...+|.. ++=..-|+|++|+|+.+-
T Consensus 94 A~y~~~g~~~~~~hE~SrF~r~~g~W~YvD 123 (128)
T 2jq5_A 94 ARFRRGGGPEQSHHERSQFRKARGRWYFSE 123 (128)
T ss_dssp EEEEESSSCEEEEEEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCceeEEEEeeeEEEECCEEEEeC
Confidence 777654433 566889999999999874
No 103
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=94.62 E-value=1.4 Score=37.84 Aligned_cols=114 Identities=8% Similarity=-0.010 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCC-------------------CCCHHHHHHHHHHHhc--
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGEL-------------------FSGYNSVIQSWQIAFN-- 225 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~-------------------l~Gr~aVr~sW~~if~-- 225 (297)
...+|.+....+..++..+|.+.-..+|++|.. +..|..+. ..|+..++..-..+..
T Consensus 21 ~~~~i~~~l~~~a~llD~~~~~~w~~lft~D~~--Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~t~~ 98 (186)
T 3gzx_B 21 LQHQVEQFYYREAQLLDHHAFQAWFALLAEDIH--YWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKTSDL 98 (186)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHhCCCCEE--EEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHhccc
Confidence 456688888899999999999999999999953 33332211 1356666665444432
Q ss_pred -c---CC-CceeEEEEeEEEEe--CCEEEEEEEeeeEe--CCCc-----eEEEEEEEE-eCC-eEEEEEEecC
Q 022429 226 -W---EQ-GVDFQVQDVRARVL--TDIAWVTMKTYIDI--DTGP-----FNMTNVFEF-HNG-QWYMVHHHSS 282 (297)
Q Consensus 226 -~---~~-~~~vei~dl~V~v~--gDvAvv~~~e~v~~--~~g~-----lraT~VfrR-~dG-~WrlvhhHaS 282 (297)
+ ++ .....+..+.|... ||.+-+.....+.. .++. -+++.+++| .+| +|||....-.
T Consensus 99 ~~a~~P~~RtrH~vsNv~v~~~~~~~~~~vrs~~~v~~~r~~~~~~~~~G~y~D~L~r~~~g~~wrI~~R~V~ 171 (186)
T 3gzx_B 99 NWAEDPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADNPLGFQIAKRTII 171 (186)
T ss_dssp CGGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSSTTSEEEEEEEEE
T ss_pred ccccCCCceEEEEEcCEEEEEecCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEEEEcCCCceEEEEEEEEE
Confidence 1 22 22455778888765 67777776655532 2232 267889999 888 9999988754
No 104
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=94.61 E-value=1.2 Score=35.42 Aligned_cols=99 Identities=15% Similarity=0.250 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC---EEEEEE
Q 022429 174 VNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD---IAWVTM 250 (297)
Q Consensus 174 a~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD---vAvv~~ 250 (297)
-.+.||..|.. +.+.|.++|.++ ..+++..+..+.|.++|.+-|...- .....+++..++.....+ +..|+|
T Consensus 10 Fv~~YY~~ld~-~r~~L~~~Y~~~--s~~~~~~~~~~~G~~~I~~~l~~Lp--f~~~~~~I~t~D~Qp~~~~gili~V~G 84 (120)
T 3ujm_A 10 FVRQYYTLLNK-APNHLHRFYNHN--SSYIHGESKLVVGQREIHNRIQQLN--FNDCHAKISQVDAQATLGNGVVVQVTG 84 (120)
T ss_dssp HHHHHHHHHHH-CGGGGGGGEEEE--EEEEETTCCCEESHHHHHHHHHHHC--CCSCEEEEEEEEEEEEGGGEEEEEEEE
T ss_pred HHHHHHHHHhc-CHHHHhhheccc--ceEEEcCCcEecCHHHHHHHHHcCC--CcceEEEEecccceEcCCCCEEEEEEE
Confidence 44678889985 899999999988 3456766778999999999887542 123356777777776533 233344
Q ss_pred EeeeEeCCC-ceEEEEEEEE--eC-CeEEEEEE
Q 022429 251 KTYIDIDTG-PFNMTNVFEF--HN-GQWYMVHH 279 (297)
Q Consensus 251 ~e~v~~~~g-~lraT~VfrR--~d-G~Wrlvhh 279 (297)
.-. .++. ..+.++.|.. .+ |+|.+...
T Consensus 85 ~l~--~~~~~~r~F~QtF~L~p~~~~~y~V~nD 115 (120)
T 3ujm_A 85 ELS--NDGQPMRRFTQTFVLAAQSPKKYYVHND 115 (120)
T ss_dssp EEE--STTCCCEEEEEEEEEEECSTTCEEEEEE
T ss_pred EEE--eCCCCCceEEEEEEEEEcCCCCEEEEEE
Confidence 433 2343 3466776665 33 78998764
No 105
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=94.44 E-value=0.95 Score=39.13 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhh-hhccCCceeeecCCCCC-------C----------CCHHHHHHHHHHHhcc--
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSR-FWLNADYVKCIHASGEL-------F----------SGYNSVIQSWQIAFNW-- 226 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~a-lWaddd~V~cvhPgg~~-------l----------~Gr~aVr~sW~~if~~-- 226 (297)
...+|.+....+..++..++.+...+ +|++|... ..|.++. . .++..++..-..+...
T Consensus 30 ~~~eI~~fl~reA~lLD~~~~d~W~~~lfteD~~y--~~p~~~~~~~~d~~~~~~~~~~~~~d~~~~L~~RV~rl~~~~~ 107 (194)
T 2bmo_B 30 LQQEVTTLLTREAHLLDIQAYKAWLEHFVAPEIKY--QVISRELRSTSERRYQLNDAVNLYNENYQQLKVRVEHQMDPQN 107 (194)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEE--EEEEECCCCSSCCCCCSCCEEEEEEECHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHhhcCCCEEE--EEecccccccccccccccccceeeeCCHHHHHHHHHHHhcccc
Confidence 34568888888889999999999999 99999543 2221111 0 1345555443333321
Q ss_pred ---CC--CceeEEEEe-EEEEeC--CEEEEEEEeeeEe--CCCc-----eEEEEEEEEeCCe-EEEEEEecCC
Q 022429 227 ---EQ--GVDFQVQDV-RARVLT--DIAWVTMKTYIDI--DTGP-----FNMTNVFEFHNGQ-WYMVHHHSSV 283 (297)
Q Consensus 227 ---~~--~~~vei~dl-~V~v~g--DvAvv~~~e~v~~--~~g~-----lraT~VfrR~dG~-WrlvhhHaSp 283 (297)
.+ ....-+..+ .|...+ |.+-+.....+.. .++. -++..+++|.+|+ |||....-..
T Consensus 108 ~a~~p~~rtrH~vsNv~~V~~~~~~d~~~vrs~~~v~~~r~~~~~~~~~G~y~D~l~r~~~g~wri~~R~v~l 180 (194)
T 2bmo_B 108 WANNPKIRFTRFVTNVTAAKDKSAPEILHVRSNLILHRARRENQVDVFYATREDKWKRIEGGGIKLVERFVDY 180 (194)
T ss_dssp GGGSSCCEEEEEEEEEEEEECSSCTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECTTSCEEEEEEEEEC
T ss_pred cccCCCCceEEEecCEEEEEEcCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEEEEECCCCCEEEEEEEEEE
Confidence 11 223457777 777655 6777766554432 2221 2668899999998 9999988654
No 106
>2i9w_A Hypothetical protein; cystatin-like fold, SEC-C motif fold, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.75A {Psychrobacter arcticus} SCOP: d.17.4.30 g.74.1.1 g.74.1.1
Probab=92.60 E-value=0.68 Score=40.27 Aligned_cols=93 Identities=14% Similarity=0.248 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEE--EeCCEEEE
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRAR--VLTDIAWV 248 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~--v~gDvAvv 248 (297)
-+++...+|.||..+|++-+.+-|.++- .|. ..+++|. .|..-..|. .++ .+... ..++.++|
T Consensus 53 aE~LMRSRYSAfvl~~~dYL~~T~hP~~-----r~~----~~~~~i~-~~~~~~~Wl---gLe--Il~~~~G~~~~~g~V 117 (184)
T 2i9w_A 53 AEHLMRTRYSAFVLVKPEYIVKTTLPAQ-----QDL----LDIKAIE-NWAKETDWA---GLE--VVAHTPKLSKRHAQV 117 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTBCHHH-----HTT----CCHHHHH-HHHHHSEEE---EEE--EEEEETTSSSSEEEE
T ss_pred HHHHHHHhHHHHHcccHHHHHHhcCccc-----Ccc----ccHHHHH-hhccCCeee---ceE--EEEeecCCCCCccEE
Confidence 3567889999999999999999996661 232 2244554 454333442 233 33333 24568999
Q ss_pred EEEeeeEeCCC--ceEEEEEEEEeCC------eEEEEE
Q 022429 249 TMKTYIDIDTG--PFNMTNVFEFHNG------QWYMVH 278 (297)
Q Consensus 249 ~~~e~v~~~~g--~lraT~VfrR~dG------~Wrlvh 278 (297)
.-..+...++. .++=..-|+|++| +|..+-
T Consensus 118 eF~A~y~~~g~~~~lhErSrFvr~~G~~~~~~rW~YvD 155 (184)
T 2i9w_A 118 EFKAYFKTPDGLQAHHELSTFVKIKNKANSDASWYFLD 155 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEECSSSSCEEEEECC
T ss_pred EEEEEEecCCCccceehhccceecCCccccccceeecc
Confidence 88888765442 3667889999999 999863
No 107
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=90.72 E-value=5 Score=32.07 Aligned_cols=100 Identities=12% Similarity=0.287 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC---EEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD---IAWV 248 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD---vAvv 248 (297)
.+-.+.||..|.. +.+.|.++|.++. ...++ |....|.++|.+.|... .. ....+++..++.....+ +..|
T Consensus 12 ~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~ls~~-g~~~~G~~~I~~~l~~L-p~-~~~~h~i~t~d~qp~~~~~ili~V 85 (127)
T 1gy6_A 12 SSFIQHYYQLFDN-DRTQLGAIYIDAS--CLTWE-GQQFQGKAAIVEKLSSL-PF-QKIQHSITAQDHQPTPDSCIISMV 85 (127)
T ss_dssp HHHHHHHHHHHHH-HGGGGGGGEEEEE--EEEET-TEEEESHHHHHHHHHHC-SC-SCEEEEEEEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHhC-CHHHHHHhhCCCc--EEEEC-CccccCHHHHHHHHHhC-CC-cceEEEEEEEEEEEeCCCcEEEEE
Confidence 4456788999988 7999999999884 33454 56889999999987653 11 12467777777776533 3334
Q ss_pred EEEeeeEeCCC-ceEEEEEE--EEeCCeEEEEEE
Q 022429 249 TMKTYIDIDTG-PFNMTNVF--EFHNGQWYMVHH 279 (297)
Q Consensus 249 ~~~e~v~~~~g-~lraT~Vf--rR~dG~Wrlvhh 279 (297)
+|.-.. +++ ....++.| ...+|+|.+...
T Consensus 86 ~G~~~~--~~~~~~~F~qtF~L~p~~~~~~I~nD 117 (127)
T 1gy6_A 86 VGQLKA--DEDPIMGFHQMFLLKNINDAWVCTND 117 (127)
T ss_dssp EEEEEE--TTSCCEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEE--CCCCcceEeEEEEEEEeCCEEEEEEE
Confidence 444332 333 34455554 446789998764
No 108
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=90.04 E-value=6.7 Score=31.81 Aligned_cols=101 Identities=14% Similarity=0.293 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC-----
Q 022429 169 RAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT----- 243 (297)
Q Consensus 169 ~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g----- 243 (297)
..-.+-.+.||..|.. |-+.|..+|.++. ...+. |....|.++|.+.|... +..++++..++.....
T Consensus 15 ~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~ls~~-g~~~~G~~~I~~~l~~L----p~~~h~i~s~d~q~~~~~~~~ 86 (140)
T 1jkg_A 15 RAAEEFVNVYYTTMDK-RRRLLSRLYMGTA--TLVWN-GNAVSGQESLSEFFEML----PSSEFQISVVDCQPVHDEATP 86 (140)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEE--EEEET-TEEEESHHHHHHHHHHS----CCEEEEEEEEEEEECCTTTST
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHhcCCCc--EEEEC-CeeecCHHHHHHHHHhC----CCceeEEEEEEEEEcCCcccC
Confidence 3345556788999988 8999999999885 33454 56789999999987633 2224677777777652
Q ss_pred --CE--EEEEEEeeeEeCCC-ceEEEEEEEEe------CCeEEEEEE
Q 022429 244 --DI--AWVTMKTYIDIDTG-PFNMTNVFEFH------NGQWYMVHH 279 (297)
Q Consensus 244 --Dv--Avv~~~e~v~~~~g-~lraT~VfrR~------dG~Wrlvhh 279 (297)
+. ..|+|.-. .++. ....+++|.-. +|+|++...
T Consensus 87 ~~~~ilI~V~G~~~--~~~~~~r~F~qtF~L~p~~~p~~~~~~I~nD 131 (140)
T 1jkg_A 87 SQTTVLVVICGSVK--FEGNKQRDFNQNFILTAQASPSNTVWKIASD 131 (140)
T ss_dssp TCCEEEEEEEEEEE--ETTSCCEEEEEEEEEEEECCSSSCEEEEEEE
T ss_pred CCCeEEEEEEEEEE--ECCCCceeeeEEEEEEecCCCCCCeEEEEee
Confidence 22 33344433 3333 34566666553 288998764
No 109
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=89.81 E-value=6.6 Score=31.45 Aligned_cols=101 Identities=18% Similarity=0.368 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe--CC-EEEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL--TD-IAWV 248 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~--gD-vAvv 248 (297)
.+-.+.||..|.. |.+.|.++|.++. ...++ |....|.++|.+.|...-. ....+++..++.... |. +..|
T Consensus 16 ~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~ls~~-g~~~~G~~~I~~~l~~Lp~--~~~~h~i~t~D~qp~~~~gilI~V 89 (129)
T 1zo2_A 16 KQFVQHYYQTFQT-NRPALGGLYGPQS--MLTWE-DTQFQGQANIVNKFNSLNF--QRVQFEITRVDCQPSPNNGSIVFV 89 (129)
T ss_dssp HHHHHHHHHHHHH-CGGGGGGGEEEEE--EEEET-TEEEESHHHHHHHHHHHCC--SCEEEEEEEEEEEECTBSSEEEEE
T ss_pred HHHHHHHHHHHhC-CHHHHHHhhCCCc--EEEEC-CceeccHHHHHHHHHhCCC--cceEEEEEEEEEEEeCCCcEEEEE
Confidence 3456788999988 8999999999884 33454 5678999999998765421 124567777777765 33 3344
Q ss_pred EEEeeeEeCCCceEEEEEEEE--eC-CeEEEEEE
Q 022429 249 TMKTYIDIDTGPFNMTNVFEF--HN-GQWYMVHH 279 (297)
Q Consensus 249 ~~~e~v~~~~g~lraT~VfrR--~d-G~Wrlvhh 279 (297)
+|.-... ++.....++.|.- .+ |+|.+...
T Consensus 90 ~G~~~~~-~~~~~~F~qtF~L~p~~~~~y~I~nD 122 (129)
T 1zo2_A 90 TGDVRID-DGQPLKFSQVFNLMPSGNGGFMIFND 122 (129)
T ss_dssp EEEEEET-TCCCEEEEEEEEEEECSSSCEEEEEE
T ss_pred EEEEEEC-CCCcceEEEEEEEEEcCCCcEEEEeE
Confidence 4543332 2234555665544 45 78998764
No 110
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=89.50 E-value=8.3 Score=32.13 Aligned_cols=98 Identities=11% Similarity=0.252 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeC-------C
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLT-------D 244 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~g-------D 244 (297)
.+-.+.||..|.. |.+.|.++|.++..+ ... |..+.|.++|.+.|... +...+++..+++.... +
T Consensus 38 ~~FV~qYY~~~d~-~R~~L~~fY~d~S~l--s~~-g~~~~G~~~I~~~l~~L----p~~~h~I~s~D~qp~~~~~~~q~~ 109 (154)
T 3nv0_B 38 KKFMDVYYDVMDR-KREKIGFLYTQVSNA--VWN-GNPINGYDSICEFMKAL----PSTQHDIQSLDAQRLPEGVTGDMS 109 (154)
T ss_dssp HHHHHHHHHHHHH-CGGGGGGGEEEEEEE--EET-TEEEESHHHHHHHHHHS----CCEEEEEEEEEEEECCTTCCGGGT
T ss_pred HHHHHHHHHHHhC-CHHHHHHHhcCCcEE--EEC-CeecccHHHHHHHHHhC----CCeEEEEEEEEEEEcCccccCCCC
Confidence 4445678999987 899999999987433 443 56789999999987644 2346777777777654 2
Q ss_pred ---EEEEEEEeeeEeCCC-ceEEEEEEE--EeCCeEEEEEE
Q 022429 245 ---IAWVTMKTYIDIDTG-PFNMTNVFE--FHNGQWYMVHH 279 (297)
Q Consensus 245 ---vAvv~~~e~v~~~~g-~lraT~Vfr--R~dG~Wrlvhh 279 (297)
+..|+|.-.. ++. ....+++|. ..+|+|+++..
T Consensus 110 ~~ilI~V~G~l~~--~~~~~r~F~QtFvL~p~~~~y~V~ND 148 (154)
T 3nv0_B 110 GGMLLNVAGAVTV--DGDSKRAFTQTLLLGVEDGKYKVKSD 148 (154)
T ss_dssp TCEEEEEEEEEEE--TTSCCEEEEEEEEEEEETTEEEEEEE
T ss_pred CeEEEEEEEEEEE--CCCCceeEEEEEEEEEeCCEEEEEee
Confidence 2334454433 343 355666665 46789998764
No 111
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=88.89 E-value=7.6 Score=30.88 Aligned_cols=101 Identities=15% Similarity=0.264 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEe---CC-EEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVL---TD-IAW 247 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~---gD-vAv 247 (297)
.+-.+.||..|.. |.+.|..+|.++. ...++ |....|.++|.+.|...- ....++++..++.... |. +..
T Consensus 10 ~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~~s~~-g~~~~G~~~I~~~l~~Lp--~~~~~h~i~t~D~qp~~~~~gili~ 83 (125)
T 1gy7_A 10 QNFTQFYYNQFDT-DRSQLGNLYRNES--MLTFE-TSQLQGAKDIVEKLVSLP--FQKVQHRITTLDAQPASPYGDVLVM 83 (125)
T ss_dssp HHHHHHHHHHHHH-HGGGGGGGEEEEE--EEEET-TEEEESHHHHHHHHHHSC--CSCEEEEEEEEEEEESSTTSCEEEE
T ss_pred HHHHHHHHHHHcC-CHHHHHHhhCCCc--EEEEC-CcEecCHHHHHHHHHhCC--CcceEEEEEEEEEEEecCCCeEEEE
Confidence 3445788888888 7999999999873 33454 568899999999875431 1134677777777765 22 344
Q ss_pred EEEEeeeEeCC-CceEEEEEE--EEeCCeEEEEEE
Q 022429 248 VTMKTYIDIDT-GPFNMTNVF--EFHNGQWYMVHH 279 (297)
Q Consensus 248 v~~~e~v~~~~-g~lraT~Vf--rR~dG~Wrlvhh 279 (297)
|+|.-... ++ .....++.| ...+++|.+...
T Consensus 84 V~G~~~~~-~~~~~~~F~qtF~L~p~~~~~~I~nD 117 (125)
T 1gy7_A 84 ITGDLLID-EEQNPQRFSQVFHLIPDGNSYYVFND 117 (125)
T ss_dssp EEEEEEET-TCSSCEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEC-CCCCCccEeEEEEEEEeCCEEEEEEE
Confidence 45554332 22 334555555 446789998764
No 112
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=85.47 E-value=12 Score=33.46 Aligned_cols=106 Identities=11% Similarity=-0.012 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCC-C-----------------------------CCCCCHHHHHHHH
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS-G-----------------------------ELFSGYNSVIQSW 220 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd~V~cvhPg-g-----------------------------~~l~Gr~aVr~sW 220 (297)
+.+-.+.||..|..+|-..|..+|.++.-.+.-.++ + ....|+++|.+.|
T Consensus 18 ~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~~~I~~~l 97 (250)
T 1jkg_B 18 VLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFL 97 (250)
T ss_dssp HHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCHHHHHHHH
Confidence 455667899999998899999999988544333222 1 2568999999987
Q ss_pred HHHhccCCCceeEEE--EeEEEEeCC-E--EEEEEEeeeEeC---CCceEEEEEEEE---eCCeEEEEEEe
Q 022429 221 QIAFNWEQGVDFQVQ--DVRARVLTD-I--AWVTMKTYIDID---TGPFNMTNVFEF---HNGQWYMVHHH 280 (297)
Q Consensus 221 ~~if~~~~~~~vei~--dl~V~v~gD-v--Avv~~~e~v~~~---~g~lraT~VfrR---~dG~WrlvhhH 280 (297)
...- ..++.+. .+++...++ . -.|+|.-..... +.....+..|.- .+|+|+|+..+
T Consensus 98 ~~LP----~t~H~~~s~~vD~~~~~~~~i~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~~~~I~ND~ 164 (250)
T 1jkg_B 98 NELP----KTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDE 164 (250)
T ss_dssp TTSC----CEEECGGGCEEEEEEECSSCEEEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTSSEEEEEEE
T ss_pred HhCC----CeeEeccceEEeeeecCCCEEEEEEEEEEEECCCCCCCCceeeEEEEEEEECCCCcEEEEeeE
Confidence 5332 2222222 333444333 2 344555333210 123445555554 26789998765
No 113
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=84.70 E-value=15 Score=30.11 Aligned_cols=107 Identities=6% Similarity=0.143 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecC--C----------CCCCCCHHHHHHHHHHHhccCCCceeEEEEeEE
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA--S----------GELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRA 239 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhP--g----------g~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V 239 (297)
.+-.+.||..|.. |.+.|.++|.++...+.... . +....|.++|.+.|..........++++..++.
T Consensus 16 ~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf~~~~h~I~s~D~ 94 (154)
T 2qiy_A 16 FAFLQNYYERMRT-DPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKVRSLKLKLDTIDF 94 (154)
T ss_dssp HHHHHHHHHHHHH-CGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHhC-CHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCCCceEEEEEEEEE
Confidence 4456789999998 89999999997754332210 0 557789999999887652111124566777777
Q ss_pred EEe-C--C--EEEEEEEeeeEeCCCceEEEEEEEE--eC--CeEEEEEEe
Q 022429 240 RVL-T--D--IAWVTMKTYIDIDTGPFNMTNVFEF--HN--GQWYMVHHH 280 (297)
Q Consensus 240 ~v~-g--D--vAvv~~~e~v~~~~g~lraT~VfrR--~d--G~WrlvhhH 280 (297)
... + + +..|+|.-... ++.....++.|.- .+ |+|.++..-
T Consensus 95 q~~~~~~~~ilI~V~G~~~~~-~~~~r~F~qtFvL~p~~~~~~y~I~ND~ 143 (154)
T 2qiy_A 95 QYTGHLHKSILIMATGEMFWT-GTPVYKFCQTFILLPSSNGSTFDITNDI 143 (154)
T ss_dssp EEESGGGCEEEEEEEEEEEET-TCCCEEEEEEEEEEECC---CEEEEEEE
T ss_pred EEccCCCCEEEEEEEEEEEEC-CCCCceEEEEEEEEEeCCCCcEEEEEEE
Confidence 764 2 2 23344443321 2234556666655 33 589987653
No 114
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=84.04 E-value=15 Score=29.41 Aligned_cols=95 Identities=9% Similarity=0.133 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHH-------HHhccCCCc-eeEEEEeEEEEeC
Q 022429 172 VNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQ-------IAFNWEQGV-DFQVQDVRARVLT 243 (297)
Q Consensus 172 ~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~-------~if~~~~~~-~vei~dl~V~v~g 243 (297)
..+-.+||+++-.||.+...++-. +.+.. .-...+.+..-.. ...+...++ .+++.. ..+.+
T Consensus 10 ~~~ak~F~~~l~~GD~e~av~~i~-------~p~~~-~~~~~e~~~gki~m~~~~~~~~~ekkGGi~~I~~~~--~~~d~ 79 (114)
T 3k7c_A 10 EDLAKNFTKDLYSGDTKSVMSYID-------LSEAK-SDEEKTFVSDKITQVVAENAAKAKRMGGVKDIQIEE--KTINK 79 (114)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTBC-------CSSCC-SHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEE--EEECS
T ss_pred HHHHHHHHHHHHcCCHHHHHhhcc-------CCccc-chhHHHHHHHHHHHHHHHHHHHHHHcCCcceEEEEE--eeccC
Confidence 345578999999999998887632 22211 0001111222111 111222343 344444 44588
Q ss_pred CEEEEEEEeeeEeCCCceEEEEEEEEeCCeEEEE
Q 022429 244 DIAWVTMKTYIDIDTGPFNMTNVFEFHNGQWYMV 277 (297)
Q Consensus 244 DvAvv~~~e~v~~~~g~lraT~VfrR~dG~Wrlv 277 (297)
+.|.+...-+.. +|..-.-+.=+.++||.|++.
T Consensus 80 ~~A~V~v~v~~k-nG~t~~~~i~LiK~dG~WkV~ 112 (114)
T 3k7c_A 80 DSAKIRVLVLFN-NDNNQSSNVFLAKKDRKWLVL 112 (114)
T ss_dssp SEEEEEEEEEET-TSCEEEEEEEEEESSSSEEEC
T ss_pred CEEEEEEEEEEC-CCCccccceeeEEeCCeEEEE
Confidence 899998887654 444445667788999999984
No 115
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=82.71 E-value=13 Score=30.03 Aligned_cols=101 Identities=10% Similarity=0.231 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhCChhhhhhhhccCCceeeecCC----C---CCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC-
Q 022429 173 NVNAEFFNIIRERSLPAMSRFWLNADYVKCIHAS----G---ELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD- 244 (297)
Q Consensus 173 aa~~aFy~A~~agDldam~alWaddd~V~cvhPg----g---~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD- 244 (297)
+-.+.||..|.. +.+.|.++|.++. ...+.+ | ....|.++|.+-|...-- ....+++..++.....+
T Consensus 15 ~Fv~~YY~~ld~-~r~~L~~~Y~~~S--~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp~--~~~~~~I~tvD~Qps~~~ 89 (140)
T 3q90_A 15 EFVRQYYTLLNQ-APDMLHRFYGKNS--SYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF--TNCHTKIRHVDAHATLND 89 (140)
T ss_dssp HHHHHHHHHHHH-CGGGGGGGEEEEE--EEC----------CCCEEHHHHHHHHHHHTCC--CSCEEEEEEEEEEECGGG
T ss_pred HHHHHHHHHHhc-CHHHHHhhcccCc--eEEEEccCCCCceeecccCHHHHHHHHHhCCC--ccceEEEEeEEEEEeCCC
Confidence 345678999985 8889999999884 334532 3 267899999998764421 12356777777776533
Q ss_pred --EEEEEEEeeeEeCCCceEEEEEEEE--eC---CeEEEEEE
Q 022429 245 --IAWVTMKTYIDIDTGPFNMTNVFEF--HN---GQWYMVHH 279 (297)
Q Consensus 245 --vAvv~~~e~v~~~~g~lraT~VfrR--~d---G~Wrlvhh 279 (297)
+-.|+|.-... ++...+.++.|.. .+ ++|.+...
T Consensus 90 gilI~V~G~l~~~-~~~~~~F~QtF~L~p~~~~~~~y~V~nD 130 (140)
T 3q90_A 90 GVVVQVMGLLSNN-NQALRRFMQTFVLAPEGSVANKFYVHND 130 (140)
T ss_dssp CEEEEEEEEEECT-TCCCEEEEEEEEEEECSSSTTCEEEEEE
T ss_pred CEEEEEEEEEecC-CCCccEEEEEEEEeecCCCCCCEEEEEE
Confidence 34445554432 2234567776655 33 78998764
No 116
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=81.12 E-value=17 Score=30.15 Aligned_cols=81 Identities=6% Similarity=0.087 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCEEEEEEEee
Q 022429 174 VNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDIAWVTMKTY 253 (297)
Q Consensus 174 a~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDvAvv~~~e~ 253 (297)
+..++.+|+-..|...+.++|..|. |+.-...+...+|..-|.+-.+..-+. ..++.+...+..-.|.+.+..|..+
T Consensus 25 lA~~Yi~AlT~hDy~~L~~Fynrds-Vf~D~ta~~~YtG~r~Ii~Fl~RaH~g--vLey~fnieHmfnsGsLVVmiGnY~ 101 (154)
T 3gzb_A 25 LAVKYMDALTEHDYKTLITFYNRDS-IFFDKTANRKYTGGRFIIDFLERAHQG--VLEYDFNIEHMYNAGSLVVMIGNYH 101 (154)
T ss_dssp HHHHHHHHHHTTCHHHHHTTCCTTC-EEEETTTTEEEESHHHHHHHHHHHTTT--CCCCEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHhccCHHHHHHHhCccc-eeeeeccCcceeCcHHHHHHHHHHhhh--heeeccChhhhccCCcEEEEEccee
Confidence 4457889999999999999999995 555555677899999999866544433 3567666666788899999999988
Q ss_pred eEeC
Q 022429 254 IDID 257 (297)
Q Consensus 254 v~~~ 257 (297)
..++
T Consensus 102 ~kGP 105 (154)
T 3gzb_A 102 FKGP 105 (154)
T ss_dssp EEEE
T ss_pred ecCc
Confidence 8763
No 117
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=79.65 E-value=23 Score=28.59 Aligned_cols=101 Identities=13% Similarity=0.156 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecC-CCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCCE
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHA-SGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTDI 245 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhP-gg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gDv 245 (297)
++++..++.+++..+|..||+..+. ++.+ +..+.| .++.+.|+++|+.-...+...- .++++.+ ..+.++-
T Consensus 3 ~re~~v~iieqYl~aF~TgdfS~Vq--Fs~~--~~F~sPir~~~l~G~~tV~gFlt~V~trV--a~V~i~~--hiVeyp~ 74 (130)
T 3ecf_A 3 ATEKYHEILKKYFLSFETGDFSQVQ--FSCN--LEFLSPISGNTLKGTEEVIPFLKGVTTRV--AEVNIMS--TTVEYPR 74 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCTTSC--EEEE--EEECCTTCSSCEESHHHHHHHHHHHHTTE--EEEEEEE--EEEETTE
T ss_pred cHHHHHHHHHHHHHHHhcCCeeecc--cccC--cEEecCccCCCccCchhHHHHHhhhhhhh--heeeeeE--EEeccCc
Confidence 4677788999999999999987543 4444 566777 7889999999998655444322 2444444 5667774
Q ss_pred EEEEEEeeeEe-CCCceEEEEEEEEeCCeEEEE
Q 022429 246 AWVTMKTYIDI-DTGPFNMTNVFEFHNGQWYMV 277 (297)
Q Consensus 246 Avv~~~e~v~~-~~g~lraT~VfrR~dG~Wrlv 277 (297)
| .+.+.++. .|.....-|-||..+.+--++
T Consensus 75 a--s~vf~m~TtkG~~~~~~~~f~~deegi~~i 105 (130)
T 3ecf_A 75 A--SGVWQMRTTKGTLYTLHNFFRLDEEGIVYV 105 (130)
T ss_dssp E--EEEEEEEETTSCEEEEEEEEEEETTEEEEE
T ss_pred c--ceeEEEEeccceEEEEeehheecccCcEEE
Confidence 3 33344443 344457788899877664443
No 118
>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} SCOP: d.17.4.5 d.175.1.1 e.3.1.1 PDB: 1mwu_A* 1mwr_A 1mws_A* 1mwt_A*
Probab=70.67 E-value=18 Score=36.55 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccC--CCceeEEEEeEEEEeCCEEEEEE
Q 022429 173 NVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWE--QGVDFQVQDVRARVLTDIAWVTM 250 (297)
Q Consensus 173 aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~--~~~~vei~dl~V~v~gDvAvv~~ 250 (297)
.+.++|.+|+.+||.++|..+-.++... . ...++..+..+.+++.- ..+++++..+. ...++.+-+..
T Consensus 6 ~~~~~f~~~~~~~d~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 75 (646)
T 1vqq_A 6 KEINNTIDAIEDKNFKQVYKDSSYISKS--------D-NGEVEMTERPIKIYNSLGVKDINIQDRKIK-KVSKNKKRVDA 75 (646)
T ss_dssp HHHHHHHHHHHTTCHHHHHHTBCHHHHH--------H-HCHHHHHTHHHHHHHHHTCCCEEEEEEEEE-EEETTEEEEEE
T ss_pred HHHHHHHHHHhcCCHHHHHHhhchhhhh--------c-CCHHHHHHHHHHHHhhhccCCceEEecccc-ccCCCeEEEEE
Confidence 4567899999999999999885432101 0 12344445555555432 23344443332 24556766666
Q ss_pred EeeeEeCCCc--eEEEEEEEEeCCeEEEE
Q 022429 251 KTYIDIDTGP--FNMTNVFEFHNGQWYMV 277 (297)
Q Consensus 251 ~e~v~~~~g~--lraT~VfrR~dG~Wrlv 277 (297)
...+....|. ...+..++|.++.|++.
T Consensus 76 ~~~~~~~~g~~~y~~~~~l~~~~~~w~v~ 104 (646)
T 1vqq_A 76 QYKIKTNYGNIDRNVQFNFVKEDGMWKLD 104 (646)
T ss_dssp EEEEEETTEEEEEEEEEEEEECSSSEEEC
T ss_pred EEEEEeccceEEEcceEEEEEcCCeEEEE
Confidence 5555433333 33444566888899854
No 119
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=64.41 E-value=64 Score=27.17 Aligned_cols=106 Identities=11% Similarity=0.114 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHhCChhhhhhhhccCCceeeecCCCCCCCCHHHHHHHHHHHhccCCCceeEEEEeEEEEeCC-EE
Q 022429 168 TRAVVNVNAEFFNIIRERSLPAMSRFWLNADYVKCIHASGELFSGYNSVIQSWQIAFNWEQGVDFQVQDVRARVLTD-IA 246 (297)
Q Consensus 168 t~aI~aa~~aFy~A~~agDldam~alWaddd~V~cvhPgg~~l~Gr~aVr~sW~~if~~~~~~~vei~dl~V~v~gD-vA 246 (297)
...|+.++ ++.+++|.+.+...|+.|- . =.-..+.++|+++|.+.... .|....++.+...-..+.|+ +|
T Consensus 20 ~~KVr~AE----DaWNsrdP~rValAYT~Ds--~-WRNR~eF~~GR~eI~~FLtr--KW~rE~dYrLiKELwaf~~nRIA 90 (166)
T 2imj_A 20 IEKIRLAE----DGWNSRDPERVSLAYTLDT--Q-WRNRAEFAHNREEAKAFLTR--KWAKELDYRLIKELWAFTDNRIA 90 (166)
T ss_dssp HHHHHHHH----HHHTTTCHHHHHTTEEEEE--E-EEETTEEECSHHHHHHHHHH--HHHHSEEEEEEEEEEEEETTEEE
T ss_pred HHHHHHHH----hhhcccChHHHhhccCCCC--c-eeccccccCcHHHHHHHHHH--HHHhhccchhhhhhheecCCeEE
Confidence 34566665 5889999999999999882 2 22245688999999984332 23333456655544556666 77
Q ss_pred EEEEEeeeEeCCCceEE--EEEEEEeCCeEEEEEEecCC
Q 022429 247 WVTMKTYIDIDTGPFNM--TNVFEFHNGQWYMVHHHSSV 283 (297)
Q Consensus 247 vv~~~e~v~~~~g~lra--T~VfrR~dG~WrlvhhHaSp 283 (297)
|-...|--+..|.++|. -.-|+..+.| +|...|+|.
T Consensus 91 VRFaYEw~D~~gqWfRsyGnEnWeFd~~G-lM~~R~aSi 128 (166)
T 2imj_A 91 VRYAYEWHDDSGNWFRSYGNENWEFDEQG-LMARRFACI 128 (166)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred EEEEeEEecCCCCEehhcCCccceECCCc-Chhheeccc
Confidence 75544433323444443 3345553222 455666653
No 120
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=39.47 E-value=64 Score=27.78 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=16.6
Q ss_pred CCCceEEEEEEEEeCCeEEEEEE
Q 022429 257 DTGPFNMTNVFEFHNGQWYMVHH 279 (297)
Q Consensus 257 ~~g~lraT~VfrR~dG~Wrlvhh 279 (297)
+|.++.+..-+++.+|+|++.=.
T Consensus 144 ~g~~i~v~y~l~~~~g~WkvyDv 166 (211)
T 2qgu_A 144 NGEPVALDYRVEKSPNGWKVYDI 166 (211)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEEEEEcCCceEEEEE
Confidence 34556777777788999998643
No 121
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=33.69 E-value=2.4e+02 Score=24.60 Aligned_cols=27 Identities=7% Similarity=0.240 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhCChhhhhhhhccCC
Q 022429 171 VVNVNAEFFNIIRERSLPAMSRFWLNAD 198 (297)
Q Consensus 171 I~aa~~aFy~A~~agDldam~alWaddd 198 (297)
+.+-.+.||..|.. |-..|+.+|.++.
T Consensus 14 ~~~Fv~~Yy~~fDs-dR~~L~~lY~~~S 40 (221)
T 1of5_A 14 STDFATNFLNLWDN-NREQLLNLYSPQS 40 (221)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEE
T ss_pred HHHHHHHHHHHHcc-CHHHHHHhhCcCc
Confidence 44567789999999 8999999999874
No 122
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=25.96 E-value=64 Score=21.00 Aligned_cols=27 Identities=0% Similarity=0.033 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhh
Q 022429 167 ATRAVVNVNAEFFNIIRERSLPAMSRF 193 (297)
Q Consensus 167 ~t~aI~aa~~aFy~A~~agDldam~al 193 (297)
..+.|.++++..|-|...||.+....+
T Consensus 6 ~~d~I~aiEQqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 6 SAANKDAIRKQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 456788999999999999999987654
Done!