BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022435
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 350 bits (898), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 218/297 (73%), Gaps = 6/297 (2%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FKKRLD G + S + K++ + L+ N C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKKRLDKDGVPVSSEAERHELGKVEVTV-FDPNSLDPNR--CESC 145
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAES D CCN+CE+VREAYR++GWA NPD I+QC+REGF Q+++E++ EGC +YGFL
Sbjct: 146 YGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFL 205
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGV 180
EVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FGE +PG+VNPLD
Sbjct: 206 EVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGEDYPGIVNPLDHT 265
Query: 181 RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFF 238
T S M+QYF+KVVPTVY V G +++NQFSVT H + + G L Q LPGVF
Sbjct: 266 NVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA-NGLLGDQGLPGVFVL 324
Query: 239 YDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+G+ID+ IYH RAI+KKI++GK
Sbjct: 325 YELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 346 bits (888), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 215/301 (71%), Gaps = 14/301 (4%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQD----GIGAPKIDKPLQRHGGRLEHNETY 56
MD++GEQ LDV+H++FKKRLD G + S + G K+ P R
Sbjct: 89 MDVAGEQQLDVEHNLFKKRLDKDGFPVSSEAERHELGKVEVKVFDPDSLDPDR------- 141
Query: 57 CGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNI 116
C SCYGAE D CCN+CE+VREAYR++GWA NPD I+QC+REGF Q+++E++ EGC +
Sbjct: 142 CESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQV 201
Query: 117 YGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNP 176
YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FGE +PG+VNP
Sbjct: 202 YGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGEDYPGIVNP 261
Query: 177 LDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPG 234
LD T S M+QYF+KVVPTVY V G +++NQFSVT H + + G + Q LPG
Sbjct: 262 LDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA-NGLMGDQGLPG 320
Query: 235 VFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIG 294
VF Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+G+ID+ IYH RAI+KKI++G
Sbjct: 321 VFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLG 380
Query: 295 K 295
K
Sbjct: 381 K 381
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 215/297 (72%), Gaps = 6/297 (2%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FK+RLD G + S + K++ + + C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHELGKVEVTVFDPDSL---DPDRCESC 145
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAE+ D CCN CE+VREAYR++GWA NPD I+QC+REGF Q+++E++ EGC +YGFL
Sbjct: 146 YGAEAEDIKCCNTCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFL 205
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGV 180
EVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FGE +PG+VNPLD
Sbjct: 206 EVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHT 265
Query: 181 RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFF 238
T S M+QYF+KVVPTVY V G +++NQFSVT H + + G L Q LPGVF
Sbjct: 266 NVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA-NGLLGDQGLPGVFVL 324
Query: 239 YDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+G+ID+ IYH RAI+KKI++GK
Sbjct: 325 YELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 344 bits (882), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 164/297 (55%), Positives = 214/297 (72%), Gaps = 6/297 (2%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FK+RLD G + S + K++ + + C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHELGKVEVTVFDPDSL---DPDRCESC 145
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAE+ D CCN CE+VRE YR++GWA NPD I+QC+REGF Q+++E++ EGC +YGFL
Sbjct: 146 YGAEAEDIKCCNTCEDVRETYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFL 205
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGV 180
EVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FGE +PG+VNPLD
Sbjct: 206 EVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHT 265
Query: 181 RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFF 238
T S M+QYF+KVVPTVY V G +++NQFSVT H + + G L Q LPGVF
Sbjct: 266 NVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA-NGLLGDQGLPGVFVL 324
Query: 239 YDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+G+ID+ IYH RAI+KKI++GK
Sbjct: 325 YELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 343 bits (881), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/297 (54%), Positives = 215/297 (72%), Gaps = 5/297 (1%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FK+RLD + S D K ++ + L+ N C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDKDKKPVTSEADRHELGKSEEHVVFDPKSLDPNR--CESC 146
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAE+ D CCN C++VREAYR++GWA PD I+QCKREGF Q+++E++ EGC +YGFL
Sbjct: 147 YGAETDDFSCCNTCDDVREAYRRRGWAFKTPDSIEQCKREGFSQKMQEQKNEGCQVYGFL 206
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGV 180
EVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H+I L+FG +PG+VNPLDG
Sbjct: 207 EVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHLSFGRDYPGLVNPLDGS 266
Query: 181 RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFF 238
S M+QYF+K+VPTVY V G +++NQFSVT H + + G + Q LPGVF
Sbjct: 267 SVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMT-NGLIGDQGLPGVFVL 325
Query: 239 YDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
Y+LSP+ V TE+H SF HFLT VCAI+GGVFTV+G+ID+ +Y+ RAI+KKIE+GK
Sbjct: 326 YELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLVYYSTRAIQKKIELGK 382
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/302 (54%), Positives = 218/302 (72%), Gaps = 10/302 (3%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FK+RLD + S D K ++ + L+ N C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDLDKKPVTSEADRHELGKSEEQVVFDPKTLDPNR--CESC 146
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAE+ D CCN+C++VREAYR+KGWA PD I+QCKREGF Q+++E++ EGC +YGFL
Sbjct: 147 YGAETDDFSCCNSCDDVREAYRRKGWAFKTPDSIEQCKREGFSQKMQEQKNEGCQVYGFL 206
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHV-----HDILAFQRDSFNISHKINKLAFGEHFPGVVN 175
EVNKVAGNFHFAPGKSF QS VHV HD+ +F D+ N++H+I L+FG+ +PG+VN
Sbjct: 207 EVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLDNINMTHEIKHLSFGKDYPGLVN 266
Query: 176 PLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLP 233
PLDG S M+QYF+K+VPTVY V G +++NQFSVT H + + G + Q LP
Sbjct: 267 PLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMT-NGLIGDQGLP 325
Query: 234 GVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEI 293
GVF Y+LSP+ V FTE+H SF HFLT VCAI+GGVFTV+G+ID+ IY+ RAI+KKIE+
Sbjct: 326 GVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLIYYSTRAIQKKIEL 385
Query: 294 GK 295
GK
Sbjct: 386 GK 387
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 340 bits (872), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 214/308 (69%), Gaps = 24/308 (7%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESR---------QDGIGAPKIDKPLQRHGGRLE 51
MD++GEQ LDV+H++FK+RLD G + + ++G+ P P +
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDKDGQPVTTEAEKHDLGKEEEGVFDPSTLDPDR------- 141
Query: 52 HNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEG 111
C SCYGAE+ D CCN C++VREAYR++GWA PD I+QCKREGF Q+++E++
Sbjct: 142 -----CESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPDTIEQCKREGFSQKMQEQKN 196
Query: 112 EGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFP 171
EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FG+ +P
Sbjct: 197 EGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGKDYP 256
Query: 172 GVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL-- 229
G+VNPLD S MYQYF+K+VPT+Y G +++NQFSVT H + + G +
Sbjct: 257 GIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIA-NGLIGD 315
Query: 230 QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKK 289
Q LPGVF Y+LSP+ V FTE+ SF HFLT VCAI+GGVFTV+G+ID+ IYH RAI+K
Sbjct: 316 QGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQK 375
Query: 290 KIEIGKFS 297
KIE+GK S
Sbjct: 376 KIELGKAS 383
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 340 bits (871), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 215/297 (72%), Gaps = 7/297 (2%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
MD++GEQ LDV+H++FK+RLD G + S + K++ + G + C SC
Sbjct: 89 MDVAGEQQLDVEHNLFKQRLDKDGTPVSSEAERHELGKVEVTV---FGPDSLDPDRCESC 145
Query: 61 YGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFL 120
YGAE+ D CCN CE+VREAYR++G A NPD I+QC+REGF Q+++E++ EGC +YGFL
Sbjct: 146 YGAEAEDIKCCNTCEDVREAYRRRG-AFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFL 204
Query: 121 EVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGV 180
EVNKVAGNFHFAPGKSF QS VHVHD+ +F D+ N++H I L+FGE +PG+VNPLD
Sbjct: 205 EVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHT 264
Query: 181 RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFF 238
T S M+QYF+KVVPTVY V G +++NQFSVT H + + G L Q LPGVF
Sbjct: 265 NVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA-NGLLGDQGLPGVFVL 323
Query: 239 YDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+G+ID+ IYH RAI+KKI++GK
Sbjct: 324 YELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGK 380
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 210/301 (69%), Gaps = 13/301 (4%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKI-DKPLQRHGGRLEHNETY-CG 58
MD+SGE DV H+IFKKRL G I I AP I ++ + + ++N+ CG
Sbjct: 88 MDVSGEHQFDVAHNIFKKRLSPTGQPI------IEAPPIREEEINKKESVKDNNDVVGCG 141
Query: 59 SCYGAESSDED--CCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNI 116
SCYGAE + CCN CEEVR AY KKGW L +P I QC REGF + + E+ GEGC +
Sbjct: 142 SCYGAEDPSKGIGCCNTCEEVRVAYSKKGWGL-DPSGIPQCIREGFTKNLVEQNGEGCQV 200
Query: 117 YGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPGVVNP 176
YGF+ VNKVAGNFHFAPGKSF Q +HVHD+ F+ SFN+SH IN+L+FG FPG+ NP
Sbjct: 201 YGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGSFNVSHTINRLSFGNDFPGIKNP 260
Query: 177 LDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFR-SSEQGRLQT-LPG 234
LD V T+ GM+QYF+KVVPT+Y ++G+ I +NQ+SVTEH+R +++G + LPG
Sbjct: 261 LDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAKKGEEPSGLPG 320
Query: 235 VFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIG 294
+FF YDLSPI + +E SF FLTNVCAI+GGVFTV GI D+FIY+ + ++KKI++G
Sbjct: 321 LFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYSTKNLQKKIDLG 380
Query: 295 K 295
K
Sbjct: 381 K 381
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 162/312 (51%), Gaps = 35/312 (11%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSC 60
+D+SGE D+ H + K RL G +I IG + + G CG C
Sbjct: 89 LDVSGEFQRDIHHTVSKTRLSPSGEIISVDDLDIGN---QQSISDDGA------AECGDC 139
Query: 61 YGAES-SDED---CCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNI 116
YGA + ED CCN C+ VR+AY K W + + D QCK E F + + ++ EGCN+
Sbjct: 140 YGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDAFKQCKDENFKELYEAQKVEGCNL 199
Query: 117 YGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAF--QRDSFNISHKINKLAFGEHFPGVV 174
G L VN++AGNFH APG+S HVHD + + D ++SH I+ L+FG V
Sbjct: 200 AGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINELDLHDMSHSIHHLSFGPPLDASV 259
Query: 175 ---NPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHT--IQSNQFSVTEHFRSSEQGRL 229
NPLDG T Y+YFIK V + +S T I +N+++VT+H RS GR
Sbjct: 260 HYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQHERSIRGGRE 319
Query: 230 QT----------LPGVFFFYDLSPIKVTFTEEHV---SFLHFLTNVCAIVGGVFTVSGII 276
+ +PGV+F +D+SP++V E V +F FL+NV A++GG T++ +
Sbjct: 320 EKVPTHVNFHGGIPGVWFQFDISPMRV--IERQVRGNTFGGFLSNVLALLGGCVTLASFV 377
Query: 277 DAFIYHGQRAIK 288
D Y Q+ K
Sbjct: 378 DRGYYEVQKLKK 389
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 164/335 (48%), Gaps = 55/335 (16%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGR------LEHNE 54
MD SGE LD+ LD+ SR + G P D GG + ++
Sbjct: 88 MDDSGEMQLDI--------LDA--GFTMSRLNSEGRPVGDATELHVGGNGDGTAPVNNDP 137
Query: 55 TYCGSCYGAESSDED---------CCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQR 105
YCG CYGA+ ++ CC +C+ VR AY + GWA + I+QC+REG++ +
Sbjct: 138 NYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEAGWAFFDGKNIEQCEREGYVSK 197
Query: 106 IKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDS-FNISHKINKL 164
I E EGC I G ++N++ GN HFAPGK + + H HD + + S N +H IN L
Sbjct: 198 INEHLNEGCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLNFNHIINHL 257
Query: 165 AFGE--------------HFPGVV--NPLDG--VRWTQETPSGMYQYFIKVVPTVYTDVS 206
+FG+ H VV +PLDG V + T + YF K+VPT Y +
Sbjct: 258 SFGKPIQSHSKLLGNDKRHGGAVVATSPLDGRQVFPDRNTHFHQFSYFAKIVPTRYEYLD 317
Query: 207 GHTIQSNQFSVTEHFRSSEQGRLQT----------LPGVFFFYDLSPIKVTFTEEH-VSF 255
I++ QFS T H R GR + +PG+F F+++SP+KV E+H ++
Sbjct: 318 NVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFVFFEMSPLKVINKEQHGQTW 377
Query: 256 LHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKK 290
F+ N +GGV V ++D Y QR+I K
Sbjct: 378 SGFILNCITSIGGVLAVGTVMDKLFYKAQRSIWGK 412
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
Query: 112 EGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFP 171
+ C I+G L VNKVAGNFH GK+ H H DS+N SH+I+ L+FGE P
Sbjct: 168 DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFGELVP 227
Query: 172 GVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQSNQFSVTEHFRS-SEQGR 228
G++NPLDG + M+QYFI VVPT ++T +S T +QFSVTE R +
Sbjct: 228 GIINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISADT---HQFSVTERERVINHAAG 284
Query: 229 LQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
+ G+F YDLS + VT TEEH+ F F +C IVGG+F+ +G++
Sbjct: 285 SHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
Query: 112 EGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFP 171
+ C I+G L VNKVAGNFH GK+ H H DS+N SH+I+ L+FGE P
Sbjct: 168 DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFGELVP 227
Query: 172 GVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQSNQFSVTEHFR-SSEQGR 228
G++NPLDG + M+QYFI VVPT ++T +S T +QFSVTE R +
Sbjct: 228 GIINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISADT---HQFSVTERERIINHAAG 284
Query: 229 LQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
+ G+F YDLS + VT TEEH+ F F +C I+GG+F+ +G++
Sbjct: 285 SHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 6/171 (3%)
Query: 109 EEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGE 168
+ + C I+G L VNKVAGNFH GK+ H H +S+N SH+I+ L+FGE
Sbjct: 165 QSPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRIDHLSFGE 224
Query: 169 HFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQSNQFSVTEHFR-SSE 225
P ++NPLDG + M+QYFI VVPT ++T +S T +QFSVTE R +
Sbjct: 225 LVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADT---HQFSVTERERIINH 281
Query: 226 QGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
+ G+F YDLS + VT TEEH+ F F +C IVGG+F+ +G++
Sbjct: 282 AAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 6/167 (3%)
Query: 113 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPG 172
C I+G L VNKVAGNFH GK+ H H +S+N SH+I+ L+FGE P
Sbjct: 169 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRIDHLSFGELVPA 228
Query: 173 VVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQSNQFSVTEHFR-SSEQGRL 229
++NPLDG + M+QYFI VVPT ++T +S T +QFSVTE R +
Sbjct: 229 IINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADT---HQFSVTERERIINHAAGS 285
Query: 230 QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
+ G+F YDLS + VT TEEH+ F F +C IVGG+F+ +G++
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Query: 113 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHFPG 172
C I+G L VNKVAGNFH GK+ H H +++N SH+I+ L+FGE PG
Sbjct: 168 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVSHETYNFSHRIDHLSFGEEIPG 227
Query: 173 VVNPLDGVRWTQETPSGMYQYFIKVVPT------VYTDVSGHTIQSNQFSVTEHFRS-SE 225
++NPLDG + M+QYFI +VPT VY D ++Q+SVTE R +
Sbjct: 228 ILNPLDGTEKVSADHNQMFQYFITIVPTKLQTYKVYAD-------THQYSVTERERVINH 280
Query: 226 QGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFI 280
+ G+F YD+S + V TE+H+ F FL +C I+GG+F+ +G++ +
Sbjct: 281 AAGSHGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTGMLHNLV 335
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 107/201 (53%), Gaps = 22/201 (10%)
Query: 104 QRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINK 163
++ G GC G +NKV GNFH V H A Q S +++H I+K
Sbjct: 105 MKVPLNNGHGCRFEGEFSINKVPGNFH-----------VSTHSATA-QPQSPDMTHIIHK 152
Query: 164 LAFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT 218
LAFG +H G N L G Q + Y +K+VPTVY ++ G S Q++V
Sbjct: 153 LAFGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVA 212
Query: 219 --EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
E+ S GR+ +P ++F YDLSPI V +TE F F+T +CAI+GG FTV+GII
Sbjct: 213 NKEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGII 270
Query: 277 DAFIYHGQRAIKKKIEIGKFS 297
D+ I+ A KKI+IGK S
Sbjct: 271 DSCIFTASEA-WKKIQIGKMS 290
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 104 QRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINK 163
+I G GC G +NKV GNFH V H A Q + +++H I+K
Sbjct: 105 MKIPLNNGAGCRFEGQFSINKVPGNFH-----------VSTHSATA-QPQNPDMTHTIHK 152
Query: 164 LAFGEHFP-----GVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT 218
L+FG+ G N L G P + Y +K+VPTVY D SG S Q++V
Sbjct: 153 LSFGDTLQVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVA 212
Query: 219 --EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
E+ S GR+ +P ++F YDLSPI V +TE F+T +CAI+GG FTV+GI+
Sbjct: 213 NKEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGIL 270
Query: 277 DAFIYHGQRAIKKKIEIGKF 296
D+ I+ A KKI++GK
Sbjct: 271 DSCIFTASEA-WKKIQLGKI 289
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 104 QRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINK 163
+I G GC G +NKV GNFH V H A Q + +++H I+K
Sbjct: 105 MKIPLNNGAGCRFEGQFSINKVPGNFH-----------VSTHSATA-QPQNPDMTHVIHK 152
Query: 164 LAFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT 218
L+FG ++ G N L G P + Y +K+VPTVY D SG S Q++V
Sbjct: 153 LSFGDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVA 212
Query: 219 --EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
E+ S GR+ +P ++F YDLSPI V +TE F+T +CAI+GG FTV+GI+
Sbjct: 213 NKEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGIL 270
Query: 277 DAFIYHGQRAIKKKIEIGKF 296
D+ I+ A KKI++GK
Sbjct: 271 DSCIFTASEA-WKKIQLGKM 289
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 104 QRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINK 163
+I GC G +NKV GNFH V H +A Q + ++ H I+K
Sbjct: 105 MKIPINNAYGCRFEGLFSINKVPGNFH-----------VSTHSAIA-QPANPDMRHIIHK 152
Query: 164 LAFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT 218
L+FG ++ G N L G + Y +K+VPTVY D++G S Q++V
Sbjct: 153 LSFGNTLQVDNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVA 212
Query: 219 E--HFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 276
+ S GR+ +P ++F YDLSPI V +TE F+T VCAI+GG FTV+GI+
Sbjct: 213 NKAYVAYSHTGRV--VPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGIL 270
Query: 277 DAFIYHGQRAIKKKIEIGKF 296
D+FI+ A KKI++GK
Sbjct: 271 DSFIFTASEA-WKKIQLGKM 289
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 97 CKREGFLQRIKEEEGEG--CNIYGFLEVNKVAGNFHF-APGKSFHQSGVHVHDILAFQRD 153
+ E F ++ E G G C IYG L VN+V G H APG + +S + H
Sbjct: 133 ARTEKFRKKNNAEPGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFH-------- 184
Query: 154 SFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSN 213
S N +H I +L+FGE++P +VN LDG +QY++ V+PT Y S + ++N
Sbjct: 185 SLNFTHYIEELSFGEYYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKS-SFRSFETN 243
Query: 214 QFSVTEHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 273
Q+S+TE+ + G PG+F YDL P+ V ++H + L + AI GG+ TV+
Sbjct: 244 QYSLTENSVVRQLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGLITVA 303
Query: 274 GIID 277
I+
Sbjct: 304 SWIE 307
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 39/204 (19%)
Query: 113 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEH--- 169
GC + G++ V KV GN + +SG H +F N+SH +N L+FG
Sbjct: 293 GCRVEGYMRVKKVPGNLMVSA-----RSGSH-----SFDSSQMNMSHVVNHLSFGRRIMP 342
Query: 170 -----------FPGVV-NPLDGVRWTQET---PSGMYQYFIKVVPTVYTDVSGHTIQSNQ 214
+ G+ + LDG + + P+ ++++++V T ++SN
Sbjct: 343 QKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYLQIVKT-------EVVKSNG 395
Query: 215 FSVTEHFRSSEQGRLQ---TLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 271
++ E + + + LP F ++LSP++V TE SF HF+TNVCAI+GGVFT
Sbjct: 396 QALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQVLITENSKSFSHFITNVCAIIGGVFT 455
Query: 272 VSGIIDAFIYHGQRAIKKKIEIGK 295
V+GI+D+ ++H + KKIE+GK
Sbjct: 456 VAGILDSILHHSM-TLMKKIELGK 478
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 113 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHF-P 171
GC + G++ V KV GN + SG H +F N+SH ++ +FG P
Sbjct: 293 GCRVEGYVRVKKVPGNLVISA-----HSGAH-----SFDSSQMNMSHVVSHFSFGRMISP 342
Query: 172 GVV--------------NPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSV 217
++ + LDG + + G + TV T+V +
Sbjct: 343 RLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSGQEHSLI 402
Query: 218 TEHFRSSEQGRLQT--LPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGI 275
E+ ++ QT LP F ++LSP+++ TE SF HF+TN+CAI+GGVFTV+GI
Sbjct: 403 EEYEYTAHSSVAQTYYLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGVFTVAGI 462
Query: 276 IDAFIYHGQRAIKKKIEIGK 295
+D+ I+H + KK+E+GK
Sbjct: 463 LDS-IFHNTVRLVKKVELGK 481
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 110 EGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEH 169
E GC+++G + VN+V+G KS G + FN H IN+ +FG+
Sbjct: 158 EFNGCHVFGSIPVNRVSGELQIT-AKSL---GYVASRKAPLEELKFN--HVINEFSFGDF 211
Query: 170 FPGVVNPLDGV-RWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEH--FRSSEQ 226
+P + NPLD ++ Q+ P Y Y+ VVPT++ + G + +NQ+SV ++
Sbjct: 212 YPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKL-GAEVDTNQYSVNDYRYLYKDVA 270
Query: 227 GRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAI 265
+ +PG+FF Y+ P+ + ++ +SF+ FL + AI
Sbjct: 271 AKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVAI 309
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 44/224 (19%)
Query: 94 IDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRD 153
+D KR L GC I GF+ V KV G+ + +SG H +F
Sbjct: 282 VDPAKRPAPLT-------SGCRIEGFVRVKKVPGSVVISA-----RSGSH-----SFDPS 324
Query: 154 SFNISHKINKLAFGEHFPGV-------VNPLDG------------VRWTQETPSGMYQYF 194
N+SH + + +FG+ + P G V+ + +++
Sbjct: 325 QINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHY 384
Query: 195 IKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRLQ---TLPGVFFFYDLSPIKVTFTEE 251
+++V T + S + + E + + L +P V F ++ SP++V TE
Sbjct: 385 LQIVKTELVTLRS----SKELKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQVLVTEL 440
Query: 252 HVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 295
SF HF+TNVCAI+GGVFTV+GI+D+ I+H + KK+E+GK
Sbjct: 441 PKSFSHFITNVCAIIGGVFTVAGILDS-IFHNTLRLVKKVELGK 483
>sp|A0R2G4|DAPE_MYCS2 Succinyl-diaminopimelate desuccinylase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=dapE PE=3 SV=1
Length = 355
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 94 IDQCK-REGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQR 152
ID C REG L ++ + G N+ + V NF FAP + Q+ HVH++
Sbjct: 212 IDGCVYREG-LSAVRIDGGIAGNV--IPDAASVTVNFRFAPDRDVDQAVAHVHEVF---- 264
Query: 153 DSFNISHKINKLAFGEHFPGVVNP 176
D +++ ++ A G PG+ P
Sbjct: 265 DGLDVTLELTDAAAGA-LPGLTQP 287
>sp|B8CKF4|DNAJ_SHEPW Chaperone protein DnaJ OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=dnaJ PE=3 SV=1
Length = 376
Score = 34.7 bits (78), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 40/197 (20%)
Query: 32 DGIGAPKIDKPLQR---HG-GRLEHNETY------CGSCYGAESSDEDCCNNCEEVREAY 81
DG GA K KP HG G+++ + + C +C+G +D CN C
Sbjct: 149 DGSGAKKGSKPTTCGTCHGQGQVQMRQGFFAVQQACPTCHGRGKIIKDPCNKCHGEGRVE 208
Query: 82 RKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSG 141
+ K ++ P +D R GEG AG F PG + Q
Sbjct: 209 KSKTLSVKIPAGVDTGDRIRL-------SGEG-----------EAGEFGAPPGDLYVQVS 250
Query: 142 VHVHDILAFQRDSFNISHKI----NKLAFGEHFPGVVNPLDG---VRWTQETPSG-MYQY 193
V H I FQRD N+ ++ +K A G V LDG ++ ET +G M++
Sbjct: 251 VREHAI--FQRDGNNLYCEVPISFSKAALGGEIE--VPTLDGKVNLKIPTETQTGRMFRM 306
Query: 194 FIKVVPTVYTDVSGHTI 210
K V +V + G +
Sbjct: 307 RGKGVKSVRSHAVGDLL 323
>sp|Q32PA5|UBE2C_BOVIN Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1
Length = 179
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNET----Y 56
+D G LD+ D + D + ++ S Q +G P ID PL H L N T Y
Sbjct: 107 VDTQGNICLDILKDKWSALYDVR-TILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKY 165
Query: 57 CGSCYGAESSDED 69
Y + S +D
Sbjct: 166 LQETYSKQVSSQD 178
>sp|Q9D1C1|UBE2C_MOUSE Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2
SV=1
Length = 179
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 1 MDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPKIDKPLQRHGGRLEHNET----Y 56
+D G LD+ D + D + ++ S Q +G P ID PL H L N T Y
Sbjct: 107 VDTQGNICLDILKDKWSALYDVR-TILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKY 165
Query: 57 CGSCYGAESSDED 69
Y + S +D
Sbjct: 166 LQETYSKQVSSQD 178
>sp|B0TQC1|DNAJ_SHEHH Chaperone protein DnaJ OS=Shewanella halifaxensis (strain HAW-EB4)
GN=dnaJ PE=3 SV=1
Length = 376
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 30/162 (18%)
Query: 57 CGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNI 116
C +C+G +D CN C + K ++ P +D R GEG
Sbjct: 184 CPTCHGRGKIIKDPCNKCHGEGRVEKSKTLSVKIPAGVDTGDRIRL-------SGEG--- 233
Query: 117 YGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKI----NKLAFGEHFPG 172
AG + PG + Q V H I FQRD N+ ++ +K A G
Sbjct: 234 --------EAGEYGAPPGDLYVQVSVREHAI--FQRDGNNLYCEVPISFSKAALGGEIE- 282
Query: 173 VVNPLDG---VRWTQETPSG-MYQYFIKVVPTVYTDVSGHTI 210
V LDG ++ ET +G M++ K V +V + G +
Sbjct: 283 -VPTLDGKVNLKIPAETQTGRMFRMRGKGVKSVRSHAVGDLL 323
>sp|A8H759|DNAJ_SHEPA Chaperone protein DnaJ OS=Shewanella pealeana (strain ATCC 700345 /
ANG-SQ1) GN=dnaJ PE=3 SV=1
Length = 376
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 30/162 (18%)
Query: 57 CGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNI 116
C +C+G +D CN C + K ++ P +D R GEG
Sbjct: 184 CPTCHGRGKIIKDPCNKCHGEGRVEKSKTLSVKIPAGVDTGDRIRL-------SGEG--- 233
Query: 117 YGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKI----NKLAFGEHFPG 172
AG + PG + Q V H I FQRD N+ ++ +K A G
Sbjct: 234 --------EAGEYGAPPGDLYVQVSVREHAI--FQRDGNNLYCEVPISFSKAALGGEIE- 282
Query: 173 VVNPLDG---VRWTQETPSG-MYQYFIKVVPTVYTDVSGHTI 210
V LDG ++ ET +G M++ K V +V + G +
Sbjct: 283 -VPTLDGKVNLKIPAETQTGRMFRMRGKGVKSVRSHAVGDLL 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,969,291
Number of Sequences: 539616
Number of extensions: 5366406
Number of successful extensions: 11126
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 11042
Number of HSP's gapped (non-prelim): 45
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)