Query 022435
Match_columns 297
No_of_seqs 155 out of 525
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 05:26:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022435.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022435hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y29a_ g.3.6.2 (A:) Huwentoxi 72.4 0.71 5.2E-05 25.1 1.3 16 59-75 8-23 (28)
2 d1x6aa2 g.39.1.3 (A:42-75) Lim 36.0 1.9 0.00014 25.0 -1.2 11 52-62 21-31 (34)
3 d1a7ia2 g.39.1.3 (A:36-67) Cys 34.0 2.1 0.00015 24.4 -1.3 11 53-63 19-29 (32)
4 d2bcgg2 c.3.1.3 (G:400-446) Gu 28.6 11 0.00081 23.3 1.4 18 71-88 23-41 (47)
5 d2v4jb1 d.58.1.5 (B:209-277) D 17.8 8.9 0.00065 25.7 -0.7 9 55-63 51-59 (69)
6 d2pg3a1 c.26.2.1 (A:1-230) Que 14.6 27 0.002 27.2 1.3 30 56-86 184-215 (230)
7 d1i26a_ g.3.6.3 (A:) PTU-1 {As 11.8 39 0.0028 18.6 1.0 12 58-72 10-21 (34)
8 d1r7ha_ c.47.1.1 (A:) Glutared 11.2 55 0.004 20.7 1.9 22 69-90 9-30 (74)
9 d1h75a_ c.47.1.1 (A:) Glutared 10.6 59 0.0043 20.8 1.9 22 69-90 9-30 (76)
10 d2dlqa2 g.37.1.1 (A:35-62) GLI 10.1 37 0.0027 18.1 0.5 8 56-63 6-13 (28)
No 1
>d1y29a_ g.3.6.2 (A:) Huwentoxin-X {Spider (Selenocosmia hainana) [TaxId: 209901]}
Probab=72.44 E-value=0.71 Score=25.12 Aligned_cols=16 Identities=44% Similarity=1.223 Sum_probs=12.1
Q ss_pred CCcCcCCCCCccccchH
Q 022435 59 SCYGAESSDEDCCNNCE 75 (297)
Q Consensus 59 sCYga~~~~~~CCntCe 75 (297)
+||||. .+..||-.|.
T Consensus 8 pcygat-qkipccgvcs 23 (28)
T d1y29a_ 8 PCYGAT-QKIPCCGVCS 23 (28)
T ss_dssp CCCTTC-CSCCBSSCBS
T ss_pred cccccc-ccccceeeec
Confidence 699995 5667998774
No 2
>d1x6aa2 g.39.1.3 (A:42-75) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.97 E-value=1.9 Score=24.96 Aligned_cols=11 Identities=45% Similarity=1.210 Sum_probs=8.4
Q ss_pred CCCCccCCCcC
Q 022435 52 HNETYCGSCYG 62 (297)
Q Consensus 52 ~~~~~CgsCYg 62 (297)
.+.-|||.||-
T Consensus 21 rskLYCG~Cy~ 31 (34)
T d1x6aa2 21 HATLYCGKCHN 31 (34)
T ss_dssp SSCEEEHHHHH
T ss_pred eceeeeecchh
Confidence 35679999984
No 3
>d1a7ia2 g.39.1.3 (A:36-67) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=33.95 E-value=2.1 Score=24.35 Aligned_cols=11 Identities=64% Similarity=1.488 Sum_probs=8.9
Q ss_pred CCCccCCCcCc
Q 022435 53 NETYCGSCYGA 63 (297)
Q Consensus 53 ~~~~CgsCYga 63 (297)
++-||-+|||-
T Consensus 19 ~eiYCKsCygk 29 (32)
T d1a7ia2 19 AEVYCKSCYGK 29 (32)
T ss_dssp TEEECSHHHHH
T ss_pred ceEEehhhccc
Confidence 35699999985
No 4
>d2bcgg2 c.3.1.3 (G:400-446) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.64 E-value=11 Score=23.31 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=13.5
Q ss_pred ccchHHHHHHHHhc-CCcC
Q 022435 71 CNNCEEVREAYRKK-GWAL 88 (297)
Q Consensus 71 CntCedV~~ay~~~-gw~~ 88 (297)
.-||+||++.|++- |-.+
T Consensus 23 Ett~~Dv~diY~ritG~~l 41 (47)
T d2bcgg2 23 ESMTDDVKDIYFRVTGHPL 41 (47)
T ss_dssp HHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHhhCCcc
Confidence 45899999999974 4433
No 5
>d2v4jb1 d.58.1.5 (B:209-277) DsrB insert domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=17.84 E-value=8.9 Score=25.73 Aligned_cols=9 Identities=56% Similarity=1.615 Sum_probs=7.2
Q ss_pred CccCCCcCc
Q 022435 55 TYCGSCYGA 63 (297)
Q Consensus 55 ~~CgsCYga 63 (297)
-|||.||--
T Consensus 51 MyCGNCYT~ 59 (69)
T d2v4jb1 51 MYCGNCYTM 59 (69)
T ss_dssp CCCCHHHHH
T ss_pred eecCCcccc
Confidence 489999954
No 6
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=14.57 E-value=27 Score=27.18 Aligned_cols=30 Identities=17% Similarity=0.440 Sum_probs=21.4
Q ss_pred ccCCCcCcCCCCCcc--ccchHHHHHHHHhcCC
Q 022435 56 YCGSCYGAESSDEDC--CNNCEEVREAYRKKGW 86 (297)
Q Consensus 56 ~CgsCYga~~~~~~C--CntCedV~~ay~~~gw 86 (297)
..-|||-... ...| |.+|.+=+.|+.+.++
T Consensus 184 ~T~SCy~~~~-~~~CG~C~~C~~R~~af~~~~~ 215 (230)
T d2pg3a1 184 HTLTCYNGIK-GDGCGQCAACHLRANGLAQYQK 215 (230)
T ss_dssp HCCCCTTSCC-TTTTSCSHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCC-CCCCCCCHhHHHHHHHHHHhCC
Confidence 4678986543 2246 8999999999887554
No 7
>d1i26a_ g.3.6.3 (A:) PTU-1 {Assassin bug (Peirates turpis) [TaxId: 181095]}
Probab=11.84 E-value=39 Score=18.63 Aligned_cols=12 Identities=42% Similarity=1.517 Sum_probs=8.0
Q ss_pred CCCcCcCCCCCcccc
Q 022435 58 GSCYGAESSDEDCCN 72 (297)
Q Consensus 58 gsCYga~~~~~~CCn 72 (297)
.+|+|.. ..|||
T Consensus 10 apcfgtd---kpccn 21 (34)
T d1i26a_ 10 APCFGTD---KPCCN 21 (34)
T ss_dssp SCCTTTT---CCBSS
T ss_pred CCccCCC---CCCcC
Confidence 3688864 35887
No 8
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=11.17 E-value=55 Score=20.70 Aligned_cols=22 Identities=23% Similarity=0.594 Sum_probs=18.4
Q ss_pred ccccchHHHHHHHHhcCCcCCC
Q 022435 69 DCCNNCEEVREAYRKKGWALSN 90 (297)
Q Consensus 69 ~CCntCedV~~ay~~~gw~~~~ 90 (297)
..|.-|+.+++..+++|..+..
T Consensus 9 ~~C~~C~~ak~~L~~~~i~~~~ 30 (74)
T d1r7ha_ 9 PACVQCTATKKALDRAGLAYNT 30 (74)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEE
T ss_pred CCChhHHHHHHHHHHcCCceEE
Confidence 4677899999999999988753
No 9
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=10.56 E-value=59 Score=20.78 Aligned_cols=22 Identities=18% Similarity=0.607 Sum_probs=18.5
Q ss_pred ccccchHHHHHHHHhcCCcCCC
Q 022435 69 DCCNNCEEVREAYRKKGWALSN 90 (297)
Q Consensus 69 ~CCntCedV~~ay~~~gw~~~~ 90 (297)
..|.-|..+++...++|..+..
T Consensus 9 ~~C~~C~~ak~~L~~~~i~y~~ 30 (76)
T d1h75a_ 9 NDCVQCHATKRAMENRGFDFEM 30 (76)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEE
T ss_pred CCCccHHHHHHHHHhcCceeEE
Confidence 4688899999999999988743
No 10
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.11 E-value=37 Score=18.11 Aligned_cols=8 Identities=50% Similarity=1.231 Sum_probs=5.6
Q ss_pred ccCCCcCc
Q 022435 56 YCGSCYGA 63 (297)
Q Consensus 56 ~CgsCYga 63 (297)
.||.||=-
T Consensus 6 kcgkcyfr 13 (28)
T d2dlqa2 6 KCGKCYFR 13 (28)
T ss_dssp TTCCBCSS
T ss_pred cchhhhhh
Confidence 58888854
Done!