BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022438
(297 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata]
Length = 452
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/294 (98%), Positives = 291/294 (98%), Gaps = 1/294 (0%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDL 60
M KTLISSPPFVGTPLPSPSSSLSRHGLH LPNRRLASTRVRLSFQEIPPILSLDSSIDL
Sbjct: 1 MAKTLISSPPFVGTPLPSPSSSLSRHGLHPLPNRRLASTRVRLSFQEIPPILSLDSSIDL 60
Query: 61 NSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKD 120
NSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKD
Sbjct: 61 NSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKD 120
Query: 121 GIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER 180
GIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER
Sbjct: 121 GIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER 180
Query: 181 IQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPT 240
IQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPT
Sbjct: 181 IQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPT 240
Query: 241 TIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
TIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA ME+MKPPQ
Sbjct: 241 TIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA-MEIMKPPQ 293
>gi|449464930|ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Cucumis sativus]
gi|449524424|ref|XP_004169223.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Cucumis sativus]
Length = 453
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/296 (80%), Positives = 259/296 (87%), Gaps = 6/296 (2%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRH-GLHRLPNRRLASTRVRLSFQEIPPILSLDSSID 59
M KTLISS PFVG+ LPS LSRH LH LP+RR +TRV SF ++PP+ + SS+D
Sbjct: 1 MAKTLISSSPFVGSSLPS----LSRHLPLHTLPHRRHLTTRVNFSFHQLPPVHTFHSSLD 56
Query: 60 LNSVFSRTESLLYTLADAAVSLDSA-SGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
++ SRTE LLYTLADAAV++DS S A STS D A QKNGGWFGFIS+AME VLK+L
Sbjct: 57 FQAIVSRTEGLLYTLADAAVAVDSTLSAAATSTSPDTAVQKNGGWFGFISDAMEVVLKVL 116
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
K ++AVH+PYSYGFAIILLT+IVKVATFPLTK+QVESTLAMQNLQPKIKAIQQRYAGNQ
Sbjct: 117 KGSLEAVHIPYSYGFAIILLTIIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 176
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLYRQAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL G
Sbjct: 177 ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 236
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSG+GISWLLPFVDGHPPLGW DTAAYLVLPVLLV+SQY SMELMKPPQ
Sbjct: 237 PTTIAARQSGAGISWLLPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQ 292
>gi|225434998|ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 1
[Vitis vinifera]
Length = 455
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/296 (82%), Positives = 262/296 (88%), Gaps = 5/296 (1%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGL-HRLPNRRLASTRVRLSFQEIPPILSLDSS-I 58
M +TLISSPPF+G PLPS SS RHGL H LP+RRL STRV+ S ++PPI SLDSS I
Sbjct: 1 MARTLISSPPFIGKPLPSLSS---RHGLLHSLPHRRLISTRVKFSLHDLPPIHSLDSSSI 57
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D + SR ESLLYTLADAAVS D A+ G AS +AD A QKNGGWFGFISE ME VLK+L
Sbjct: 58 DFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVL 117
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
+DG+ AVHVPY+YGFAIILLTVIVK+AT+PLTKKQVESTLAMQNLQPKIKAIQ+RY GNQ
Sbjct: 118 EDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQ 177
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL G
Sbjct: 178 ERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 237
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSGSGISWL+PFVDGHPPLGW DTAAYLVLPVLLV+SQY SMELMKPPQ
Sbjct: 238 PTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQ 293
>gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]
gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa]
Length = 451
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/296 (79%), Positives = 257/296 (86%), Gaps = 9/296 (3%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRLPNRRLASTRVRLSFQE-IPPILS-LDSSI 58
M +TL+SSPPF+GTPLPS LSRH L NRR STR++LS + IPPI L SS+
Sbjct: 1 MARTLLSSPPFIGTPLPS----LSRHAL--TTNRRFISTRIKLSLHDNIPPIHHHLHSSV 54
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D N++ SR E LYTLADAAV++DSA+ +S +AD A QKNGGWFGFIS+ MEFVLK+L
Sbjct: 55 DFNTIISRAEGFLYTLADAAVAVDSAASTTSSDTADAA-QKNGGWFGFISDGMEFVLKVL 113
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +VHVPY+YGFAIILLT+ VKVAT PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ
Sbjct: 114 KDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 173
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLYRQAGVNPLAGC PTLATIPVWIGLYQALSNVANEG+LTEGFFWIPSL G
Sbjct: 174 ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGG 233
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSGSGISWL PFVDGHPPLGWHDTAAYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 234 PTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLIASQYVSMEIMKPPQ 289
>gi|356542455|ref|XP_003539682.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Glycine max]
Length = 450
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/296 (78%), Positives = 249/296 (84%), Gaps = 9/296 (3%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRLPNR-RLASTRVRLSFQEIPPILSLDSSID 59
M KTLISSP F+GTPLPS L RH LP+R R +T+V +S EIPPI SL SID
Sbjct: 1 MAKTLISSPSFIGTPLPS----LPRH---HLPHRTRFVTTKVHVSLHEIPPIQSLSHSID 53
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAASTSA-DGATQKNGGWFGFISEAMEFVLKIL 118
+ +R E LLYTLADAAV+ D A + S D A QK+GGWFGFISEAMEFVLK+L
Sbjct: 54 FAGIVTRAEGLLYTLADAAVAADPAVAADTAASTTDAAVQKSGGWFGFISEAMEFVLKVL 113
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ AVHVPY+YGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ RYAGNQ
Sbjct: 114 KDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQ 173
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL G
Sbjct: 174 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGG 233
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSG+GISWL PFVDGHPPLGW DTAAYLVLP+LLVVSQY SME+MKPPQ
Sbjct: 234 PTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQ 289
>gi|356539022|ref|XP_003537999.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Glycine max]
Length = 450
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/296 (77%), Positives = 250/296 (84%), Gaps = 9/296 (3%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRLPNR-RLASTRVRLSFQEIPPILSLDSSID 59
M KTLISS F+GTPLPS L RH LP+R RL +T+V +S EIPPI S+ +ID
Sbjct: 1 MAKTLISSQSFIGTPLPS----LPRH---HLPHRTRLVATKVLVSLHEIPPIHSISRNID 53
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAAST-SADGATQKNGGWFGFISEAMEFVLKIL 118
+ +R E LLYTLADAAV+ D A ++ + D A QK+GGWFGFISEAMEFVLK+L
Sbjct: 54 FAGIVTRAEGLLYTLADAAVAADPAVAADSAASTTDAAVQKSGGWFGFISEAMEFVLKVL 113
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ AVHVPY+YGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ RYAGNQ
Sbjct: 114 KDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQ 173
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL G
Sbjct: 174 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGG 233
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSG+GISWL PFVDGHPPLGW DTAAYLVLP+LLVVSQY SME+MKPPQ
Sbjct: 234 PTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQ 289
>gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
[Ricinus communis]
gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative
[Ricinus communis]
Length = 449
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/297 (79%), Positives = 257/297 (86%), Gaps = 13/297 (4%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHR--LPNRR-LASTRVRLSFQEIPPILSLDSS 57
M KTLISSP F+G PLPS SS RHGL LP+RR +++T+V+ S EIPPI LDS
Sbjct: 1 MAKTLISSPSFIGAPLPSSSS---RHGLQHSLLPSRRFISTTKVKFSLHEIPPITHLDS- 56
Query: 58 IDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKI 117
+D NS+ SR ESLLYTLADAAV++ +S + D A QKN GWFGFISE MEFVLK+
Sbjct: 57 VDFNSIVSRAESLLYTLADAAVAV------DSSAATDTAVQKNNGWFGFISEGMEFVLKV 110
Query: 118 LKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN 177
LKDG+ +VHVPYSYGFAIILLTVIVK+AT PLTK+QVESTLAMQNLQPKIKAIQQRYAGN
Sbjct: 111 LKDGLSSVHVPYSYGFAIILLTVIVKIATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGN 170
Query: 178 QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
QERIQLETSRLYRQAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL
Sbjct: 171 QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLG 230
Query: 238 GPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
GPTTIAARQSGSGISWL PFVDGHPPLGW+DTAAYLVLPVLLVVSQY SME+MKPPQ
Sbjct: 231 GPTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQ 287
>gi|15226968|ref|NP_180446.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|38372238|sp|Q8LBP4.2|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags:
Precursor
gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana]
gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 462
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/291 (73%), Positives = 238/291 (81%), Gaps = 16/291 (5%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ ++
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIA 252
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 253 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQ 303
>gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
lyrata]
gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
lyrata]
Length = 458
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/288 (75%), Positives = 238/288 (82%), Gaps = 14/288 (4%)
Query: 16 LPSPSSSLSRHGL------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSVFSRT 67
L PSSSL G +R N +L ST VR S EIPP LDSS+D+ ++ +R
Sbjct: 17 LIKPSSSLRHSGGGAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAILTRA 76
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADG-ATQKNGGWFGFISEAMEFVLKILKDGIDAVH 126
ESLLYT+ADAAV G + S D A QK+GGWFGFIS+ ME VLKILKDG+ AVH
Sbjct: 77 ESLLYTIADAAVV-----GADSVVSTDSSAVQKSGGWFGFISDGMELVLKILKDGLSAVH 131
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
VPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS
Sbjct: 132 VPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 191
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQ 246
RLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQ
Sbjct: 192 RLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQ 251
Query: 247 SGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
SGSGISWL PFVDGHPPLGW+DTAAYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 252 SGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIASQYVSMEIMKPPQ 299
>gi|38372402|sp|Q9FY06.2|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName:
Full=Post-floral-specific protein 1; Flags: Precursor
gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum]
Length = 442
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/298 (75%), Positives = 247/298 (82%), Gaps = 17/298 (5%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRL--PNRRLASTRVRLSFQEIPPILSLDSSI 58
M KTLISSP F+GTPLPS LHR PNR T+V+ SF ++PPI S+ S+
Sbjct: 1 MAKTLISSPSFLGTPLPS---------LHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSV 51
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
DL+ +F+R E LLYTLADA V+ A+ S D A QKNGGWFGFIS+ MEFVLK+L
Sbjct: 52 DLSGIFARAEGLLYTLADATVAA------DAAASTDVAAQKNGGWFGFISDGMEFVLKVL 105
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +VHVPYSYGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ+RYAGNQ
Sbjct: 106 KDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQ 165
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL G
Sbjct: 166 ERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGG 225
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
PT+IAARQSGSGISWL PFVDGHP LGW+DTAAYLVLPVLL+VSQY SME+MKPPQ
Sbjct: 226 PTSIAARQSGSGISWLFPFVDGHPLLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTN 283
>gi|30684018|ref|NP_850125.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 348
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/291 (73%), Positives = 238/291 (81%), Gaps = 16/291 (5%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ ++
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIA 252
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 253 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQ 303
>gi|186503883|ref|NP_001118405.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 342
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/291 (73%), Positives = 238/291 (81%), Gaps = 16/291 (5%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ ++
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIA 252
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 253 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQ 303
>gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 462
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/291 (73%), Positives = 237/291 (81%), Gaps = 16/291 (5%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ S+
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGSI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QA VNPLAGCLPTLATIPVWIGLYQALSN+ANEGL TEGFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNLANEGLFTEGFFWIPSLGGPTSIA 252
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 253 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQ 303
>gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa]
gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa]
Length = 446
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/296 (80%), Positives = 257/296 (86%), Gaps = 12/296 (4%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRLPNRRLASTRVRLSFQE-IPPILS-LDSSI 58
M +TL+SSPPF+ T LPS LSRH L NRR STR++LS + IPPI LDSSI
Sbjct: 1 MARTLLSSPPFIATSLPS----LSRHTL--TTNRRFISTRIKLSLHDNIPPIHHHLDSSI 54
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D NS+ SR E LYTLADAAV++DSA A++TS D A QK+GGWFGFIS+ MEFVLK+L
Sbjct: 55 DFNSIISRAEGFLYTLADAAVAVDSA---ASTTSTDTA-QKSGGWFGFISDGMEFVLKVL 110
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ AVHVPY+YGFAIILLTV VKVAT PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ
Sbjct: 111 KDGLSAVHVPYAYGFAIILLTVFVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 170
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLYRQAGVNPLAGC PTLATIPVWIGLYQALSNVANEG+LTEGFFWIPSL G
Sbjct: 171 ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGG 230
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSGSGISWL PFVDGHPPLGW+DTAAYLVLPVLLVVSQY SME+MKPPQ
Sbjct: 231 PTTIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPVLLVVSQYVSMEIMKPPQ 286
>gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum]
Length = 442
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/298 (74%), Positives = 245/298 (82%), Gaps = 17/298 (5%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRL--PNRRLASTRVRLSFQEIPPILSLDSSI 58
M KTLISSP F+GTPLPS LHR PNR T+V+ SF ++PPI S+ S+
Sbjct: 1 MAKTLISSPSFLGTPLPS---------LHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSV 51
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
DL+ +F+R E LLYTLADA V+ A+ S D A QKNGGWFGFIS+ MEFVLK+L
Sbjct: 52 DLSGIFARAEGLLYTLADATVAA------DAAASTDVAAQKNGGWFGFISDGMEFVLKVL 105
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
K G+ +VHVPYSYGFAIILLT IVK AT PLTK+QVESTLAMQN QPKIKAIQ+RYAGNQ
Sbjct: 106 KGGLSSVHVPYSYGFAIILLTGIVKAATLPLTKQQVESTLAMQNPQPKIKAIQERYAGNQ 165
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL G
Sbjct: 166 ERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGG 225
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
PT+IAARQSGSGISWL PFVDGHPPLGW+DTAAYLVLPVLL+VSQY SME+MKPPQ
Sbjct: 226 PTSIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTN 283
>gi|359478973|ref|XP_003632199.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 2
[Vitis vinifera]
Length = 425
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/296 (72%), Positives = 233/296 (78%), Gaps = 35/296 (11%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGL-HRLPNRRLASTRVRLSFQEIPPILSLDSS-I 58
M +TLISSPPF+G PLPS SS RHGL H LP+RRL STRV+ S ++PPI SLDSS I
Sbjct: 1 MARTLISSPPFIGKPLPSLSS---RHGLLHSLPHRRLISTRVKFSLHDLPPIHSLDSSSI 57
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D + SR ESLLYTLADAAVS D A+ G AS +AD A QKNGGWFGFISE ME VLK+L
Sbjct: 58 DFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVL 117
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
+DG+ AVHVPY+YGFAIILLTVIVK+AT+PLTKKQVESTLAMQNLQPKIKAIQ+RY GNQ
Sbjct: 118 EDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQ 177
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLY+QAGVNPLA GFFWIPSL G
Sbjct: 178 ERIQLETSRLYKQAGVNPLA------------------------------GFFWIPSLGG 207
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIAARQSGSGISWL+PFVDGHPPLGW DTAAYLVLPVLLV+SQY SMELMKPPQ
Sbjct: 208 PTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQ 263
>gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/225 (88%), Positives = 210/225 (93%)
Query: 70 LLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPY 129
LLYTLADAAVS D A+ G AS +AD A QKNGGWFGFISE ME VLK+L+DG+ AVHVPY
Sbjct: 65 LLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVLEDGLTAVHVPY 124
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YGFAIILLTVIVK+AT+PLTKKQVESTLAMQNLQPKIKAIQ+RY GNQERIQLETSRLY
Sbjct: 125 AYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQERIQLETSRLY 184
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQSGS
Sbjct: 185 KQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGS 244
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
GISWL+PFVDGHPPLGW DTAAYLVLPVLLV+SQY SMELMKPPQ
Sbjct: 245 GISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQ 289
>gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis]
Length = 471
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/288 (68%), Positives = 225/288 (78%), Gaps = 15/288 (5%)
Query: 15 PLPSPSSSLSRHGLHRL--PNR-----RLASTRVRLSFQEIPPILSLDSSIDLNSVFSRT 67
PL +S+SR P R R +VR S Q++PP LD+ +D+ + SR
Sbjct: 13 PLAHQRASISRPSYSSFLTPRRPLFESRRVKVKVRFSLQQLPPPDQLDAYVDIPRLVSRA 72
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E LLYTLADAAV A S S A + NG WFGFI++ +E LK+LKDG+ VHV
Sbjct: 73 EGLLYTLADAAV--------ATSDSVAPAQKTNGSWFGFIADGLEGFLKVLKDGLTTVHV 124
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
PY+YGFAII LTV+VK+ATFPLTKKQVESTLAMQNLQPKIKAIQ+RY G+QERIQLETSR
Sbjct: 125 PYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKGDQERIQLETSR 184
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+QAGVNPLAGCLPTLAT+PVWIGLYQALSNVANEGLLTEGFFWIPSL+GPTTIAARQ+
Sbjct: 185 LYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQN 244
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
G+GISWL PFVDG PPLGW DT AYLVLPVLLV SQY SM++M+ PQA
Sbjct: 245 GTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQA 292
>gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis]
Length = 471
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/288 (68%), Positives = 225/288 (78%), Gaps = 15/288 (5%)
Query: 15 PLPSPSSSLSRHGLHRL--PNR-----RLASTRVRLSFQEIPPILSLDSSIDLNSVFSRT 67
PL +S+SR P R R +VR S Q++PP LD+ +D+ + SR
Sbjct: 13 PLAHQRASISRPSYSSFFTPRRPLFESRRVKVKVRFSLQQLPPPDQLDAYVDIPRLVSRA 72
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E LLYTLADAAV A S S A + NG WFGFI++ +E LK+LKDG+ VHV
Sbjct: 73 EGLLYTLADAAV--------ATSDSVAPAQKTNGSWFGFIADGLEGFLKVLKDGLTTVHV 124
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
PY+YGFAII LTV+VK+ATFPLTKKQVESTLAMQNLQPKIKAIQ+RY G+QERIQLETSR
Sbjct: 125 PYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKGDQERIQLETSR 184
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+QAGVNPLAGCLPTLAT+PVWIGLYQALSNVANEGLLTEGFFWIPSL+GPTTIAARQ+
Sbjct: 185 LYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQN 244
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
G+GISWL PFVDG PPLGW DT AYLVLPVLLV SQY SM++M+ PQA
Sbjct: 245 GTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQA 292
>gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group]
gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group]
gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group]
Length = 459
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/280 (72%), Positives = 223/280 (79%), Gaps = 16/280 (5%)
Query: 22 SLSRHGLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSL 81
SL RHG RR ++ RVR S + I + +DL++ R E+ LYTLADAAV
Sbjct: 30 SLRRHG-----GRRASACRVRASLHGLDSI----AGLDLHAALERAEAALYTLADAAVVA 80
Query: 82 DSASGGAASTSAD-------GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFA 134
A+ G QKNGGWFGFISEA+E VLK+LKDG+ AVHVPYSYGFA
Sbjct: 81 ADAAAGGGGGGGGGGGEAAASVAQKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFA 140
Query: 135 IILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGV 194
IILLTVIVK AT PLTK+QVESTLAMQNLQP+IKAIQQRYAGNQERIQLET+RLY+QAGV
Sbjct: 141 IILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGV 200
Query: 195 NPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
NPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL
Sbjct: 201 NPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWL 260
Query: 255 LPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
LPFVDGHPPLGWHDT YLVLPVLLV SQ+ SME+MKPPQ
Sbjct: 261 LPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQ 300
>gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group]
Length = 459
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/280 (73%), Positives = 224/280 (80%), Gaps = 16/280 (5%)
Query: 22 SLSRHGLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSL 81
SL RHG RR ++ RVR S + I + +DL++ R E+ LYTLADAAV
Sbjct: 30 SLRRHG-----GRRASACRVRASLHGLDSI----AGLDLHAALERAEAALYTLADAAVVA 80
Query: 82 DSASGGAASTSADGAT-------QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFA 134
A+ G G QKNGGWFGFISEA+E VLK+LKDG+ AVHVPYSYGFA
Sbjct: 81 ADAAAGGGGGGGGGGGEAAAAVAQKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFA 140
Query: 135 IILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGV 194
IILLTVIVK AT PLTK+QVESTLAMQNLQP+IKAIQQRYAGNQERIQLET+RLY+QAGV
Sbjct: 141 IILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGV 200
Query: 195 NPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
NPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL
Sbjct: 201 NPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWL 260
Query: 255 LPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
LPFVDGHPPLGWHDT YLVLPVLLV SQ+ SME+MKPPQ
Sbjct: 261 LPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQ 300
>gi|357134175|ref|XP_003568693.1| PREDICTED: inner membrane protein ALBINO3, chloroplastic-like
[Brachypodium distachyon]
Length = 441
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/265 (74%), Positives = 219/265 (82%), Gaps = 7/265 (2%)
Query: 31 LPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
LP R A R R + + SLDS L++ R E+ LYTLADAAV +A
Sbjct: 25 LPPLRTAGHRGRAAGCAVRA--SLDSVGGLHAALERAEAALYTLADAAVVAGAAG----- 77
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
D A QK GGWFGFIS+AME VLK+LKDG+ AVHVPYSYGFAIILLT++VK AT PLT
Sbjct: 78 GDLDQAVQKKGGWFGFISDAMEVVLKVLKDGLSAVHVPYSYGFAIILLTIVVKAATLPLT 137
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
K+QVESTLAMQNLQP++KAIQQRYAGNQERIQLET+RLY+QAGVNPLAGCLPTLATIPVW
Sbjct: 138 KQQVESTLAMQNLQPQLKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCLPTLATIPVW 197
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL PFVDGHPP+GWHDT
Sbjct: 198 IGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTI 257
Query: 271 AYLVLPVLLVVSQYASMELMKPPQA 295
AYLVLPVLLV SQ+ SME+MKPPQ+
Sbjct: 258 AYLVLPVLLVASQFVSMEIMKPPQS 282
>gi|194702082|gb|ACF85125.1| unknown [Zea mays]
gi|414876324|tpg|DAA53455.1| TPA: inner membrane protein ALBINO3 [Zea mays]
Length = 455
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/198 (88%), Positives = 186/198 (93%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
QKN GWFGFISEA+E VLK+LKDG+ AVHVPYSYGFAIILLT+IVK AT PLTKKQVEST
Sbjct: 101 QKNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVEST 160
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LAMQNLQP+IKAIQQRYAGNQERIQLET+RLY+QAGVNPLAGC PTLATIPVWIGLYQAL
Sbjct: 161 LAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 220
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
SNVANEGLLTEGFFWIPSL GPTTIAARQSGSGI+WL PFVDGHPPLGWHDT YLVLPV
Sbjct: 221 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPV 280
Query: 278 LLVVSQYASMELMKPPQA 295
LLV SQY SME+MKPPQ+
Sbjct: 281 LLVASQYVSMEIMKPPQS 298
>gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group]
Length = 952
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/197 (89%), Positives = 187/197 (94%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
QKNGGWFGFISEA+E VLK+LKDG+ AVHVPYSYGFAIILLTVIVK AT PLTK+QVEST
Sbjct: 571 QKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVEST 630
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LAMQNLQP+IKAIQQRYAGNQERIQLET+RLY+QAGVNPLAGC PTLATIPVWIGLYQAL
Sbjct: 631 LAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 690
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
SNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWLLPFVDGHPPLGWHDT YLVLPV
Sbjct: 691 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLVLPV 750
Query: 278 LLVVSQYASMELMKPPQ 294
LLV SQ+ SME+MKPPQ
Sbjct: 751 LLVASQFVSMEIMKPPQ 767
>gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays]
gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays]
Length = 449
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 185/197 (93%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
KN GWFGFISEA+E VLK+LKDG+ AVHVPYSYGFAIILLT+IVK AT PLTKKQVESTL
Sbjct: 98 KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 157
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
AMQNLQP+IKAIQQRYAGNQERIQLET+RLY+QAGVNPLAGC PTLATIPVWIGLYQALS
Sbjct: 158 AMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALS 217
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVL 278
NVANEGLLTEGFFWIPSL GPTTIAARQSGSGI+WL PFVDGHPPLGWHDT YLVLPVL
Sbjct: 218 NVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVL 277
Query: 279 LVVSQYASMELMKPPQA 295
LV SQY SME+MKPPQ+
Sbjct: 278 LVASQYVSMEIMKPPQS 294
>gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays]
gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays]
gi|223974117|gb|ACN31246.1| unknown [Zea mays]
gi|413947415|gb|AFW80064.1| inner membrane protein ALBINO3 [Zea mays]
Length = 459
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/197 (88%), Positives = 186/197 (94%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
KNGGWFGFISEA+E VLK+LKDG+ AVHVPYSYGFAIILLT+IVK AT PLTKKQVEST+
Sbjct: 104 KNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTM 163
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
AMQNLQP++KAIQQRYAGNQERIQLET+RLYRQAGVNPLAGC PTLATIPVWIGLYQALS
Sbjct: 164 AMQNLQPQLKAIQQRYAGNQERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALS 223
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVL 278
NVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL PFVDGHPPLGW+DT YLVLPVL
Sbjct: 224 NVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVL 283
Query: 279 LVVSQYASMELMKPPQA 295
LV SQY SME+MKPPQ+
Sbjct: 284 LVASQYVSMEIMKPPQS 300
>gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/264 (74%), Positives = 218/264 (82%), Gaps = 8/264 (3%)
Query: 34 RRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSA 93
RR A RVR S LDS L++ R E+ LYTLADAAV ++ GAA
Sbjct: 34 RRAAGCRVRASLH------GLDSVGGLHAALERAEAALYTLADAAVVAADSAAGAAGGGE 87
Query: 94 DGA--TQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTK 151
D QK+GGWFGFIS+AME VLKILKDG+ AVHVPY+YGFAIILLT++VK AT PLTK
Sbjct: 88 DAGTAVQKSGGWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTK 147
Query: 152 KQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
+QVEST+AMQNLQP++KAIQ RYAGNQERIQLET+RLY+QAGVNPLAGCLPTLATIPVWI
Sbjct: 148 QQVESTMAMQNLQPQLKAIQARYAGNQERIQLETARLYKQAGVNPLAGCLPTLATIPVWI 207
Query: 212 GLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAA 271
GLYQALSNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL PFVDGHPP+GWHDT
Sbjct: 208 GLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTIC 267
Query: 272 YLVLPVLLVVSQYASMELMKPPQA 295
YLVLPVLLV SQ+ SME+MKPPQ+
Sbjct: 268 YLVLPVLLVASQFVSMEIMKPPQS 291
>gi|334184544|ref|NP_001189626.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 432
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 186/291 (63%), Positives = 209/291 (71%), Gaps = 46/291 (15%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ ++
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QAGVNPLA GFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQAGVNPLA------------------------------GFFWIPSLGGPTSIA 222
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQ
Sbjct: 223 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQ 273
>gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
Length = 313
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/231 (72%), Positives = 196/231 (84%), Gaps = 3/231 (1%)
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
+R E LYT+ADAAV+ D + G + T + WF ++ ME VLK+LKDG+
Sbjct: 1 LARVEGFLYTVADAAVATDVVTDGTSETVQQA---QQSDWFSGVTTVMEAVLKVLKDGLT 57
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
+ VPY+YGFAIILLTV+VKV TFPLTK Q EST++MQNLQPK+KAIQQRYAG+QERIQ+
Sbjct: 58 TLKVPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERIQM 117
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ET+RLY+QAGVNPLAGCLPTLAT+PVWIGLY+ALSNVANEGLL+EGFFWIPSL+GPTTIA
Sbjct: 118 ETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIA 177
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW DT AYLVLPVLL+ SQYASM++M+PPQ
Sbjct: 178 ARQSGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQ 228
>gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group]
Length = 533
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 207/264 (78%), Gaps = 11/264 (4%)
Query: 34 RRLASTRVRLSFQEIPPILSLDSSI---DLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
RR+A RV L P+ +L ++ +F R E+ LYT+ADAAVS AS
Sbjct: 35 RRVAPRRVVLR-----PVAALGGGGGFAEVGELFGRVEAFLYTVADAAVS---ASPEVVQ 86
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
G + G W I+ +ME VLK+LKDG+ A+HVPY YGFAIILLTV+VK ATFPLT
Sbjct: 87 GGGGGTKEAAGDWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLT 146
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KKQVES +AM++LQP++KAIQ+RYAG+QERIQLET+RLY+ +GV+PLAGCLPTL TIPVW
Sbjct: 147 KKQVESAIAMRSLQPQVKAIQERYAGDQERIQLETARLYKLSGVDPLAGCLPTLVTIPVW 206
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLY+ALSNVANEGLLTEGFFWIPSL+GPTTIAARQSG GISWL PF DGHPPLGW DT
Sbjct: 207 IGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTL 266
Query: 271 AYLVLPVLLVVSQYASMELMKPPQ 294
AYLVLPVLLV+SQY S ++M+PPQ
Sbjct: 267 AYLVLPVLLVISQYVSSQVMQPPQ 290
>gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
Length = 306
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/231 (73%), Positives = 196/231 (84%), Gaps = 3/231 (1%)
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
+R E LYT+ADAAV+ D + STS + WF ++ ME VLK+LKDG+
Sbjct: 1 LARVEGFLYTVADAAVATDVVTD---STSETVQQAQQSDWFSGVTTVMEAVLKVLKDGLT 57
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
+ VPY+YGFAIILLTV+VKV TFPLTK Q EST++MQNLQPK+KAIQQRYAG+QERIQ+
Sbjct: 58 TLKVPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERIQM 117
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ET+RLY+QAGVNPLAGCLPTLAT+PVWIGLY+ALSNVANEGLL+EGFFWIPSL+GPTTIA
Sbjct: 118 ETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIA 177
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
ARQSGSGISWL PFVDGHPPLGW DT AYLVLPVLL+ SQYASM++M+PPQ
Sbjct: 178 ARQSGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQ 228
>gi|343171890|gb|AEL98649.1| ALBINO3-like protein, partial [Silene latifolia]
Length = 458
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/235 (70%), Positives = 200/235 (85%), Gaps = 5/235 (2%)
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILK 119
+ +F R E +LYTLADAAV+ + + S ++NG W I+ +ME +LK+LK
Sbjct: 63 VKELFGRAEGILYTLADAAVNNTDVVDASNTVS-----KQNGDWLSGITSSMESILKVLK 117
Query: 120 DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQE 179
DG+ +VHVPYSYGFAIILLT++VK ATFPL+KKQVES +AM++LQP+IKAIQ+RYAG+QE
Sbjct: 118 DGLTSVHVPYSYGFAIILLTILVKAATFPLSKKQVESAMAMRSLQPQIKAIQKRYAGDQE 177
Query: 180 RIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RIQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+GP
Sbjct: 178 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGP 237
Query: 240 TTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
TT+AAR SGSGISWL PFVDGHPPLGW DTAAYLVLPVLL+VSQY S+++M+ Q
Sbjct: 238 TTVAARASGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLIVSQYISIQIMQSSQ 292
>gi|225424558|ref|XP_002282031.1| PREDICTED: ALBINO3-like protein 1, chloroplastic [Vitis vinifera]
gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 211/265 (79%), Gaps = 17/265 (6%)
Query: 31 LPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
LPNRR R F+ P S + + +F R E+LLYT+ADAAVS
Sbjct: 36 LPNRRSLGV-ARFGFR---PFHSDGADAVIGDLFGRVETLLYTIADAAVS---------- 81
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
++DG +++G W I+ ME VLK+LK G+ +HVPY+YGFAIILLTV+VK ATFPLT
Sbjct: 82 -ASDG--KQSGDWLSGITNYMETVLKVLKGGLSTLHVPYAYGFAIILLTVLVKAATFPLT 138
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KKQVES +AM++LQP+IKAIQQRYAG+QERIQLET+RLY+ AG+NPLAGCLPTLATIPVW
Sbjct: 139 KKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 198
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLY+ALSNVA+EGLLTEGFFWIPSLSGPTTIAARQ+GSGISWL PFVDGHPPLGW DT
Sbjct: 199 IGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTL 258
Query: 271 AYLVLPVLLVVSQYASMELMKPPQA 295
AYLVLP+LL+VSQY S+++M+ Q+
Sbjct: 259 AYLVLPMLLIVSQYISVQIMQSSQS 283
>gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group]
Length = 510
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 206/264 (78%), Gaps = 11/264 (4%)
Query: 34 RRLASTRVRLSFQEIPPILSLDSSI---DLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
RR+A RV L P+ +L ++ +F R E+ LYT+ADAAVS AS
Sbjct: 35 RRVAPRRVVLR-----PVAALGGGGGFAEVGELFGRVEAFLYTVADAAVS---ASPEVVQ 86
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
G + G W I+ +ME VLK+LKDG+ A+HVPY YGFAIILLTV+VK ATFPLT
Sbjct: 87 GGGGGTKEAAGDWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLT 146
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KKQVES +AM++LQP++KAIQ+RYAG+QERIQLET+RLY+ + V+PLAGCLPTL TIPVW
Sbjct: 147 KKQVESAIAMRSLQPQVKAIQERYAGDQERIQLETARLYKLSDVDPLAGCLPTLVTIPVW 206
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLY+ALSNVANEGLLTEGFFWIPSL+GPTTIAARQSG GISWL PF DGHPPLGW DT
Sbjct: 207 IGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTL 266
Query: 271 AYLVLPVLLVVSQYASMELMKPPQ 294
AYLVLPVLLV+SQY S ++M+PPQ
Sbjct: 267 AYLVLPVLLVISQYVSSQVMQPPQ 290
>gi|356569211|ref|XP_003552798.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
Length = 534
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/277 (65%), Positives = 216/277 (77%), Gaps = 16/277 (5%)
Query: 20 SSSLSRHGLHRLPNRRLASTRVRLSFQEIPPILSLDSSID--LNSVFSRTESLLYTLADA 77
S S +RH L R + T R FQ P L + L +F R E LLYT+ADA
Sbjct: 34 SGSTARHFL------RGSLTVARFGFQ--PGFLPEPDEAEGVLRELFGRAEGLLYTIADA 85
Query: 78 AVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIIL 137
AVS S+ AAST+A +++ W I+ ME VLK+LKDG+ A+HVPY+YGFAIIL
Sbjct: 86 AVS--SSDTVAASTTA----KQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIIL 139
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPL 197
LTV+VK ATFPLTKKQVES LAM+ LQP++KAIQQ+YAG+QERIQLET+RLY+ A +NPL
Sbjct: 140 LTVLVKAATFPLTKKQVESALAMRTLQPQVKAIQQQYAGDQERIQLETARLYKLANINPL 199
Query: 198 AGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPF 257
AGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+GSGISW+ PF
Sbjct: 200 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWIFPF 259
Query: 258 VDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
VDGHPPLGW DT AYLVLPVLL+VSQY S+++M+ Q
Sbjct: 260 VDGHPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQ 296
>gi|343171892|gb|AEL98650.1| ALBINO3-like protein, partial [Silene latifolia]
Length = 458
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/235 (70%), Positives = 199/235 (84%), Gaps = 5/235 (2%)
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILK 119
+ +F R E +LYTLADAAV+ + + S ++NG W I+ +ME +LK+LK
Sbjct: 63 VKELFGRAEGILYTLADAAVNNTDVVDASNTVS-----KQNGDWLSGITSSMESILKVLK 117
Query: 120 DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQE 179
DG+ +VHVPYSYGFAIILLTV+VK ATFPL+KKQVES +AM++LQP+IKAIQ+RYAG+QE
Sbjct: 118 DGLTSVHVPYSYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQKRYAGDQE 177
Query: 180 RIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RIQLET+R Y+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+GP
Sbjct: 178 RIQLETARSYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGP 237
Query: 240 TTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
TT+AAR SGSGISWL PFVDGHPPLGW DTAAYLVLPVLL+VSQY S+++M+ Q
Sbjct: 238 TTVAARASGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLIVSQYISIQIMQSSQ 292
>gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza
sativa Japonica Group]
gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 489
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 206/264 (78%), Gaps = 11/264 (4%)
Query: 34 RRLASTRVRLSFQEIPPILSLDSSI---DLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
RR+A RV L P+ +L ++ +F R E+ LYT+ADAAVS AS
Sbjct: 35 RRVAPRRVVLR-----PVAALGGGGGFAEVGELFGRVEAFLYTVADAAVS---ASPEVVQ 86
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
G + G W I+ +ME VLK+LKDG+ A+HVPY YGFAIILLTV+VK ATFPLT
Sbjct: 87 GGGGGTKEAAGDWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLT 146
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KKQVES +AM++LQP++KAIQ+RYAG+QERIQLET+RLY+ + V+PLAGCLPTL TIPVW
Sbjct: 147 KKQVESAIAMRSLQPQVKAIQERYAGDQERIQLETARLYKLSDVDPLAGCLPTLVTIPVW 206
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLY+ALSNVANEGLLTEGFFWIPSL+GPTTIAARQSG GISWL PF DGHPPLGW DT
Sbjct: 207 IGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTL 266
Query: 271 AYLVLPVLLVVSQYASMELMKPPQ 294
AYLVLPVLLV+SQY S ++M+PPQ
Sbjct: 267 AYLVLPVLLVISQYVSSQVMQPPQ 290
>gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/234 (73%), Positives = 192/234 (82%), Gaps = 7/234 (2%)
Query: 63 VFSRTESLLYTLADAAVSLDSASGGAASTSADGATQK-NGGWFGFISEAMEFVLKILKDG 121
+ +RTE L +TLADAAV+ D D QK +GGW G I+ +E L LKDG
Sbjct: 1 LLTRTEGLFFTLADAAVATDPGQ------VTDAVVQKQDGGWLGGITNTLELALTFLKDG 54
Query: 122 IDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERI 181
I + +PYSYGFAIILLTVIVK AT+PLTKKQVESTLAMQNLQPKIKAIQ RY G+QERI
Sbjct: 55 IAKIGLPYSYGFAIILLTVIVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQGDQERI 114
Query: 182 QLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTT 241
QLET+RLY+QAGVNPLAGCLPTLAT+PVWIGLY+ALSNVANEGLLTEGFFWIPSL+GPTT
Sbjct: 115 QLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTT 174
Query: 242 IAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
IAAR SGSGISWL PFVDG PPLGW DT AYLVLPVLL+ SQY SM++M+P A
Sbjct: 175 IAARSSGSGISWLFPFVDGAPPLGWGDTIAYLVLPVLLIGSQYVSMQIMQPATA 228
>gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa]
gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa]
Length = 292
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/233 (70%), Positives = 197/233 (84%), Gaps = 7/233 (3%)
Query: 63 VFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGI 122
+F R ES++YT+ADAAVS + D +T +N W I+ +E LK+LKDG+
Sbjct: 1 LFGRAESIVYTIADAAVS-------NSDQVVDSSTTQNSDWLSGITYGLESTLKVLKDGL 53
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQ 182
AVH+PY+YGFAIILLTV+VK ATFPL+KKQVES +AM++LQP+IKAIQQRYAG+QERIQ
Sbjct: 54 SAVHLPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQ 113
Query: 183 LETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
LET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+GPT I
Sbjct: 114 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTAI 173
Query: 243 AARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
A+RQ+GSGISWL PFVDGHPPLGW DT AYLVLPV+LVVSQY S+++M+ Q+
Sbjct: 174 ASRQNGSGISWLFPFVDGHPPLGWSDTVAYLVLPVMLVVSQYISVQIMQSSQS 226
>gi|414873899|tpg|DAA52456.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 495
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 196/238 (82%), Gaps = 6/238 (2%)
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D + R E+LLYT+ADAAVS + + +A G W I+ +ME VLK+L
Sbjct: 49 DAGDLLGRVEALLYTVADAAVSAEPVAAAGTKEAA------AGDWLSSITNSMETVLKVL 102
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ ++HVPYSYGFAIILLTV+VK ATFPLTKKQVES LAM++LQP++K IQ+RYAG+Q
Sbjct: 103 KDGLLSLHVPYSYGFAIILLTVLVKAATFPLTKKQVESALAMRSLQPQVKTIQERYAGDQ 162
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLET+RLY+ +GV+PLAGCLPTL TIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+G
Sbjct: 163 ERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 222
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
PTTIAA+Q+G GISWL PF DGHPPLGW DT AYLVLPVLLV+SQY S ++M+PPQ+
Sbjct: 223 PTTIAAQQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISSQVMQPPQSN 280
>gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa]
gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa]
Length = 281
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/233 (68%), Positives = 193/233 (82%), Gaps = 7/233 (3%)
Query: 63 VFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGI 122
+F R ES++YT+ADAAVS D +T++N W I+ +E LK+LKDG+
Sbjct: 1 LFGRAESIIYTIADAAVS-------NPEQVVDSSTKQNSDWLSGITSCLESTLKVLKDGL 53
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQ 182
A+HVPY+YGFAIILLTV+VK ATFPL+KKQVES +AM++LQP+IKA+QQ YAG+QERIQ
Sbjct: 54 SALHVPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAGDQERIQ 113
Query: 183 LETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
LET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+GPTTI
Sbjct: 114 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTI 173
Query: 243 AARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
A RQ+GSGISWL PFVDG PPLGW DT AYLVLP +LVV QY S+++M+ Q+
Sbjct: 174 AERQNGSGISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQYMSVQIMQSSQS 226
>gi|449450415|ref|XP_004142958.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 506
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 183/296 (61%), Positives = 220/296 (74%), Gaps = 20/296 (6%)
Query: 9 PPFVGTPLPS--PSSSLSRHGL------HRLPNRRLASTRVRLSFQEIPPILSLDSSID- 59
P FV + PS P+S+ HG+ H P R + R F+ P L + +
Sbjct: 9 PNFVFSSFPSRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFK--PEFLPDPDNAEG 66
Query: 60 -LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
+ +F + ES LYT+ADAAVS AS ++ WF I+ ME VLKIL
Sbjct: 67 FVRDLFGKAESFLYTIADAAVS--------ASPDNVTTVKQTDDWFTGITNYMESVLKIL 118
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +HVPY+YGFAIILLTV+VK ATFPLTKKQVES +AM++LQP++KA+QQRYAG+Q
Sbjct: 119 KDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQ 178
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+G
Sbjct: 179 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 238
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIA+RQ+GSGISWL PFVDGHPPLGW DT AYLVLPVLLVVSQY S+++M+ Q
Sbjct: 239 PTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQ 294
>gi|449494582|ref|XP_004159588.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 477
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/296 (61%), Positives = 220/296 (74%), Gaps = 20/296 (6%)
Query: 9 PPFVGTPLPS--PSSSLSRHGL------HRLPNRRLASTRVRLSFQEIPPILSLDSSID- 59
P FV + PS P+S+ HG+ H P R + R F+ P L + +
Sbjct: 9 PNFVFSSFPSRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFK--PEFLPDPDNAEG 66
Query: 60 -LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
+ +F + ES LYT+ADAAVS AS ++ WF I+ ME VLKIL
Sbjct: 67 FVRDLFGKAESFLYTIADAAVS--------ASPDNVTTVKQTDDWFTGITNYMESVLKIL 118
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +HVPY+YGFAIILLTV+VK ATFPLTKKQVES +AM++LQP++KA+QQRYAG+Q
Sbjct: 119 KDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQ 178
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+G
Sbjct: 179 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 238
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
PTTIA+RQ+GSGISWL PFVDGHPPLGW DT AYLVLPVLLVVSQY S+++M+ Q
Sbjct: 239 PTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQ 294
>gi|357114741|ref|XP_003559153.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Brachypodium
distachyon]
Length = 513
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/264 (65%), Positives = 206/264 (78%), Gaps = 10/264 (3%)
Query: 32 PNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAAST 91
P RR + VR P+ +L D+ +F R E+ LYT+ADAAV + + AA
Sbjct: 40 PARRGGAALVR-------PVAALGGGGDVGELFVRVEAFLYTVADAAVVAAAPAAEAAEG 92
Query: 92 SADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTK 151
A A W I+ +ME VLK+LKDG+ +H+PYSYGFAIILLTV++K ATFPLTK
Sbjct: 93 GAKEAAGD---WLSGITGSMETVLKVLKDGLSTLHIPYSYGFAIILLTVLIKGATFPLTK 149
Query: 152 KQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
KQVES LAM++LQP++KAIQ+RYAG+QERIQLET+RLY+ +GV+PLAGCLPTL TIPVWI
Sbjct: 150 KQVESALAMRSLQPQVKAIQERYAGDQERIQLETARLYKLSGVDPLAGCLPTLVTIPVWI 209
Query: 212 GLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAA 271
GLY+ALSNVANEGLLTEGFFWIPSL+GPTTIAARQSG GISWL PF DGHPPLGW DT A
Sbjct: 210 GLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLA 269
Query: 272 YLVLPVLLVVSQYASMELMKPPQA 295
YLVLPVLLV+SQY S ++M+P Q+
Sbjct: 270 YLVLPVLLVISQYVSAQIMQPSQS 293
>gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/196 (78%), Positives = 174/196 (88%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+++GGW G +S ++E L LKD I + +PYSYGFAIILLT++VK AT+PLTKKQVEST
Sbjct: 5 KQDGGWLGGVSNSLEIALTFLKDTIAKLGIPYSYGFAIILLTILVKAATYPLTKKQVEST 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LAMQNLQPKIKAIQ RY G+QERIQLET+RLY+QAGVNPLAGCLPTLAT+PVWIGLY+AL
Sbjct: 65 LAMQNLQPKIKAIQTRYQGDQERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRAL 124
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
SNVANEGLLTEGFFWIPSL+GPTTIAAR SGSGISWL PFVDG P LGW DT AYLVLPV
Sbjct: 125 SNVANEGLLTEGFFWIPSLAGPTTIAARSSGSGISWLFPFVDGAPSLGWADTIAYLVLPV 184
Query: 278 LLVVSQYASMELMKPP 293
LL+ SQY SM++M+PP
Sbjct: 185 LLIGSQYVSMQIMQPP 200
>gi|240254150|ref|NP_173858.5| ALBINO3-like protein 1 [Arabidopsis thaliana]
gi|223590242|sp|Q9FYL3.3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName:
Full=Arabidopsis thaliana envelope membrane integrase;
AltName: Full=Protein ALBINA 4; Short=Ath4; AltName:
Full=Protein ARTEMIS; Flags: Precursor
gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana]
gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
Length = 499
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 194/228 (85%), Gaps = 2/228 (0%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+LLYT+ADAAVS A T+ T ++ WF I+ ME +LK+LKDG+ VHV
Sbjct: 63 ENLLYTIADAAVSSSETFESVAGTTT--KTTQSNDWFSGIANYMETILKVLKDGLSTVHV 120
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
PYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+R
Sbjct: 121 PYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETAR 180
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+
Sbjct: 181 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQN 240
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
GSGISWL PF++GHPPLGW DT AYLVLP+LLV SQY S+++M+ Q+
Sbjct: 241 GSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQS 288
>gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana]
Length = 302
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/229 (70%), Positives = 194/229 (84%), Gaps = 2/229 (0%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+LLYT+ADAAVS A T+ T ++ WF I+ ME +LK+LKDG+ VHV
Sbjct: 63 ENLLYTIADAAVSSSETFESVAGTTTK--TTQSNDWFSGIANYMETILKVLKDGLSTVHV 120
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
PYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+R
Sbjct: 121 PYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETAR 180
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+
Sbjct: 181 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQN 240
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
GSGISWL PF++GHPPLGW DT AYLVLP+LLV SQY S+++M+ Q+
Sbjct: 241 GSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSN 289
>gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 512
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 194/238 (81%), Gaps = 4/238 (1%)
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D+ + R E+ LYT+ADAAV+ A A A A +G WF I+ +ME VLK+L
Sbjct: 59 DVGQLLGRVEAFLYTVADAAVAAAPA----AEGGAKDAAAASGDWFAGITGSMETVLKVL 114
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +HVPY YGFAIILLTV++K ATFPLTKKQVES LAM++LQP++KAIQ+R+AG+Q
Sbjct: 115 KDGLSTLHVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRSLQPQVKAIQERHAGDQ 174
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLET+ LY+ +GV+PLAGCLPTL TIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+G
Sbjct: 175 ERIQLETAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVANEGLLTEGFFWIPSLAG 234
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
PTTIAAR+SG GISW+ PF DGHPPLGW DT AYLVLPVLLV+SQY S ++M+ Q+
Sbjct: 235 PTTIAARESGQGISWIFPFTDGHPPLGWPDTLAYLVLPVLLVISQYVSAQIMQSSQSN 292
>gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis]
gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis]
Length = 499
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/235 (68%), Positives = 197/235 (83%), Gaps = 6/235 (2%)
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILK 119
+ +F++ ESLLYT+ADAAVS + + + N W I+ ME VLK+L+
Sbjct: 70 IKDLFTKAESLLYTIADAAVS------SSDTINTTTKQTNNNDWLSGITSYMETVLKVLQ 123
Query: 120 DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQE 179
+G+ +HVPY+YGFAIILLTV+VK ATFPLTKKQVES +AM++LQP+IKAIQQ+YAGNQE
Sbjct: 124 NGLSGLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQE 183
Query: 180 RIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
+IQLET+RLY+ AG+NP AGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GP
Sbjct: 184 KIQLETARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 243
Query: 240 TTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
TT+AARQ+GSGISWL PFVDGHPPLGW+DT AYLVLPVLLVVSQY S+++M+ Q
Sbjct: 244 TTVAARQNGSGISWLFPFVDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQ 298
>gi|356540205|ref|XP_003538580.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
Length = 543
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/235 (72%), Positives = 199/235 (84%), Gaps = 1/235 (0%)
Query: 60 LNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILK 119
L +F R E LLYT+ADAAVS S+S ++ A Q N W I+ ME VLK+LK
Sbjct: 69 LRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSND-WLSGIANYMETVLKVLK 127
Query: 120 DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQE 179
DG+ A+HVPY+YGFAIILLTV+VK ATFPLTKKQVES+LAM+ LQP++KAIQQRYAG+QE
Sbjct: 128 DGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQRYAGDQE 187
Query: 180 RIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RIQLET+RLY+ A +NPLAGCLPTLATIPVWIGLY+ALS+VA+EGLLTEGFFWIPSL+GP
Sbjct: 188 RIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFWIPSLAGP 247
Query: 240 TTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
TT+AARQ+GSGISWL PFVDGHPPLGW DT AYLVLPVLLVVSQY S+++M+ Q
Sbjct: 248 TTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQ 302
>gi|357463169|ref|XP_003601866.1| Inner membrane protein ALBINO3 [Medicago truncatula]
gi|355490914|gb|AES72117.1| Inner membrane protein ALBINO3 [Medicago truncatula]
Length = 532
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/241 (66%), Positives = 196/241 (81%), Gaps = 6/241 (2%)
Query: 55 DSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFV 114
D+ L +F+R E LYT+ADAAVS S+ +T+A ++N WF I+ ME +
Sbjct: 63 DAEFVLRELFNRAEGFLYTIADAAVS--SSDIAITTTTA----KQNNDWFSGITNYMEII 116
Query: 115 LKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY 174
LK+LKDG+ +HVPY+YGFAII+LT++VKVATFPLT+KQVES +AM++LQP++KAIQ++Y
Sbjct: 117 LKVLKDGLSTLHVPYAYGFAIIMLTILVKVATFPLTRKQVESAMAMRSLQPQVKAIQKQY 176
Query: 175 AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 234
A +QERIQLET+RLY A +NPLAGCLP L T PVWIGLY+A SNVA+EGLL EGFFWIP
Sbjct: 177 ARDQERIQLETARLYTLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLNEGFFWIP 236
Query: 235 SLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
SLSGPTTIAARQ+GS ISWL PFVDGHPPLGW DT AYLVLPVLLVVSQY S+++M+ Q
Sbjct: 237 SLSGPTTIAARQNGSAISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIMQSSQ 296
Query: 295 A 295
A
Sbjct: 297 A 297
>gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera]
Length = 623
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/324 (54%), Positives = 211/324 (65%), Gaps = 77/324 (23%)
Query: 31 LPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAAS 90
LPNRR R F+ P S + + +F R E+LLYT+ADAAVS
Sbjct: 36 LPNRRSLGV-ARFGFR---PFHSDGADAVIGDLFGRVETLLYTIADAAVS---------- 81
Query: 91 TSADGATQKNGGWFGFISEAMEFVLK-ILKD---------------------GIDAVH-- 126
++DG +++G W I+ ME VLK +LK G+D +H
Sbjct: 82 -ASDG--KQSGDWLSGITNYMETVLKNVLKPWVDKLIWYEMPELSITQFRLFGLDVLHCM 138
Query: 127 ------------------------------------VPYSYGFAIILLTVIVKVATFPLT 150
VPY+YGFAIILLTV+VK ATFPLT
Sbjct: 139 TWKRQGYDTSRVCIVTIEKRKFCXLEVLKGGLSTLHVPYAYGFAIILLTVLVKAATFPLT 198
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KKQVES +AM++LQP+IKAIQQRYAG+QERIQLET+RLY+ AG+NPLAGCLPTLATIPVW
Sbjct: 199 KKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 258
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
IGLY+ALSNVA+EGLLTEGFFWIPSLSGPTTIAARQ+GSGISWL PFVDGHPPLGW DT
Sbjct: 259 IGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTL 318
Query: 271 AYLVLPVLLVVSQYASMELMKPPQ 294
AYLVLP+LL+VSQY S+++M+ Q
Sbjct: 319 AYLVLPMLLIVSQYISVQIMQSSQ 342
>gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana]
Length = 519
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/248 (64%), Positives = 194/248 (78%), Gaps = 22/248 (8%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+LLYT+ADAAVS A T+ T ++ WF I+ ME +LK+LKDG+ VHV
Sbjct: 63 ENLLYTIADAAVSSSETFESVAGTTT--KTTQSNDWFSGIANYMETILKVLKDGLSTVHV 120
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQV--------------------ESTLAMQNLQPKI 167
PYSYGFAIILLTV+VK ATFPLTKKQV ES +AM++L P+I
Sbjct: 121 PYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLVHVIELVVYSLQVESAMAMKSLTPQI 180
Query: 168 KAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLT 227
KAIQ+RYAG+QE+IQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLT
Sbjct: 181 KAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLT 240
Query: 228 EGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASM 287
EGFFWIPSL+GPTT+AARQ+GSGISWL PF++GHPPLGW DT AYLVLP+LLV SQY S+
Sbjct: 241 EGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSI 300
Query: 288 ELMKPPQA 295
++M+ Q+
Sbjct: 301 QIMQSSQS 308
>gi|384250016|gb|EIE23496.1| hypothetical protein COCSUDRAFT_15426 [Coccomyxa subellipsoidea
C-169]
Length = 332
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 179/220 (81%), Gaps = 3/220 (1%)
Query: 75 ADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFA 134
ADA VS +A A +A+ A Q++ GWFGF + E VLK+L G+D +HVPYSYGF+
Sbjct: 20 ADAIVSSATAVQSATDAAAE-AVQRDNGWFGFFTGPFETVLKVLDTGLDKLHVPYSYGFS 78
Query: 135 IILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG-NQERIQLETSRLYRQAG 193
IILLT+ VK TFPL+KKQVEST+A+Q LQP++K IQ++Y G + + Q+E ++LY++A
Sbjct: 79 IILLTIFVKALTFPLSKKQVESTVAIQALQPRVKEIQEKYKGRDPQEAQIEVAKLYQEAK 138
Query: 194 VNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISW 253
VNPLAGCLPTL T+PVWIGLY+ALSNVA+EGLL+EGFFWIPSL+GPTT+AA+++G+G SW
Sbjct: 139 VNPLAGCLPTLITLPVWIGLYRALSNVADEGLLSEGFFWIPSLAGPTTLAAQKAGAG-SW 197
Query: 254 LLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
L P V+G PP+GWHD +AYLVLPVLL+VSQY S +++ PP
Sbjct: 198 LFPLVNGAPPIGWHDASAYLVLPVLLIVSQYVSQKIISPP 237
>gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 162/197 (82%), Gaps = 7/197 (3%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAV---HVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+ GGW G I++ +E L +GID+V VPYSYGF+II+LTV+VK+ATFPL+KKQVE
Sbjct: 9 QKGGWLGPITDGLESAL----EGIDSVLDGRVPYSYGFSIIVLTVLVKLATFPLSKKQVE 64
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S++ MQ +QP+IK +Q YA + ER+Q+E +RLY++AG NPLAGCLP AT+PV+IGLY+
Sbjct: 65 SSMQMQAMQPRIKELQAMYANDPERLQMEQARLYKEAGFNPLAGCLPVFATLPVFIGLYR 124
Query: 216 ALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL 275
ALSN A+EGLLT+GF+WIPSL GPT+IA+R +GSG +WL PFVDGHPPLGWHDT AYLVL
Sbjct: 125 ALSNAASEGLLTDGFYWIPSLGGPTSIASRNAGSGFAWLWPFVDGHPPLGWHDTTAYLVL 184
Query: 276 PVLLVVSQYASMELMKP 292
PVLLV SQY S +++ P
Sbjct: 185 PVLLVASQYVSQQIVSP 201
>gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
Length = 480
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 155/198 (78%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
+ GGW G I++ +E +LK + G + VPYSYG+AI+ LTV+VKV TFPLTKKQVE +L
Sbjct: 110 QKGGWLGPITDLLESILKGIDSGFVGLGVPYSYGYAILALTVLVKVVTFPLTKKQVEGSL 169
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
MQ +QP++K +Q YA + ER+Q+ET+RLY++A NPLAGCLPT AT+PV+IGLY+ALS
Sbjct: 170 QMQAIQPRVKELQAMYANDPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALS 229
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVL 278
N A EG LT+GF+WIPSL GPT+I AR G+G +WL PFVDG PPLGWHDT AYLVLPVL
Sbjct: 230 NAAVEGELTDGFYWIPSLGGPTSIEARNDGNGFAWLFPFVDGAPPLGWHDTIAYLVLPVL 289
Query: 279 LVVSQYASMELMKPPQAR 296
LV SQ S ++M P Q +
Sbjct: 290 LVASQLISQKVMTPDQPK 307
>gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
Length = 483
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 163/199 (81%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
+ GGW G I++ +E L ++ G++ ++VPYSYG+AI++LTV+VK+ TFPLTKKQVE ++
Sbjct: 109 QKGGWLGPITDFLEASLGVIDQGLEGLNVPYSYGYAILVLTVVVKLVTFPLTKKQVEGSI 168
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
AMQ LQP++K +Q YA + ER+Q+ET+RLY++A NPLAGCLPT AT+PV+IGLY+ALS
Sbjct: 169 AMQALQPRVKELQAMYANDPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALS 228
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVL 278
N A EG+L +GF+WIPSL GPT+IAAR GSG SWL PFVDG PPLGWHDTAAYL LPVL
Sbjct: 229 NAATEGMLEDGFYWIPSLGGPTSIAARNDGSGFSWLWPFVDGAPPLGWHDTAAYLALPVL 288
Query: 279 LVVSQYASMELMKPPQARK 297
LVVSQ+AS ++M P Q +
Sbjct: 289 LVVSQFASQKIMTPDQGKD 307
>gi|223973321|gb|ACN30848.1| unknown [Zea mays]
gi|413947416|gb|AFW80065.1| hypothetical protein ZEAMMB73_868395 [Zea mays]
Length = 297
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 131/138 (94%)
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+AMQNLQP++KAIQQRYAGNQERIQLET+RLYRQAGVNPLAGC PTLATIPVWIGLYQAL
Sbjct: 1 MAMQNLQPQLKAIQQRYAGNQERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQAL 60
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
SNVANEGLLTEGFFWIPSL GPTTIAARQSG+GISWL PFVDGHPPLGW+DT YLVLPV
Sbjct: 61 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPV 120
Query: 278 LLVVSQYASMELMKPPQA 295
LLV SQY SME+MKPPQ+
Sbjct: 121 LLVASQYVSMEIMKPPQS 138
>gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis]
Length = 474
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 92 SADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTK 151
SA Q+ GGW +++ +E VL +LKD +D +HVPYSYG++IILLT+IVK+ T+PLTK
Sbjct: 95 SASPTDQRAGGWVAPLADVLEQVLYVLKDCLDLLHVPYSYGYSIILLTLIVKIVTYPLTK 154
Query: 152 KQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
+QVESTLA+Q L+P++ I+ R+ ++E+IQ ETS LY QAGVNPLAGCLPTLAT P++I
Sbjct: 155 QQVESTLAVQALKPRVDLIKDRFGDDKEKIQKETSILYEQAGVNPLAGCLPTLATTPIFI 214
Query: 212 GLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
GLY +L+NVANEGLL T+GF+WIPSL+GPTT+A RQSG G SWL P VDG P +GW
Sbjct: 215 GLYSSLTNVANEGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPLVDGAPAIGWDAAV 274
Query: 271 AYLVLPVLLVVSQYASM 287
AYL LPVLL++ QYAS+
Sbjct: 275 AYLTLPVLLILVQYASL 291
>gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
[Volvox carteri f. nagariensis]
gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
[Volvox carteri f. nagariensis]
Length = 413
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 156/198 (78%), Gaps = 5/198 (2%)
Query: 97 TQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVES 156
T +GG +++ VL+ L DG++ HVPYSYGFAII LTV+VK+ATFPLT+KQVES
Sbjct: 71 TLADGGPIDLLAQFFTSVLRTLDDGLENAHVPYSYGFAIITLTVLVKLATFPLTQKQVES 130
Query: 157 TLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA 216
TL++Q LQP++K +Q ++A + E +QLET+R+Y++AGVNPLAGCLPTLATIPV+IGLY A
Sbjct: 131 TLSLQALQPRVKELQAKHADDPETLQLETARMYKEAGVNPLAGCLPTLATIPVFIGLYNA 190
Query: 217 LSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLP 276
LSN A GLLTEGFFWIPSLSGPTTI G G+ WL PF DG PP+GW + AAYLV+P
Sbjct: 191 LSNAAKAGLLTEGFFWIPSLSGPTTI-----GGGLEWLFPFQDGAPPVGWANAAAYLVMP 245
Query: 277 VLLVVSQYASMELMKPPQ 294
VLLV SQYAS +++ Q
Sbjct: 246 VLLVASQYASQKIISTTQ 263
>gi|38372239|sp|Q8LKI3.1|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic;
Flags: Precursor
gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii]
Length = 422
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 156/194 (80%), Gaps = 5/194 (2%)
Query: 97 TQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVES 156
T GG +++ EFVL+ L +G+++ +PYSYGFAII LTV+VKVATFPLT+KQVES
Sbjct: 67 TLAEGGPIDVLAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVES 126
Query: 157 TLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA 216
TL++Q LQP++K +Q +YA + E +QLET+RLY++AGVNPLAGC PTLATIPV+IGLY A
Sbjct: 127 TLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNA 186
Query: 217 LSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLP 276
LSN A EGLLTEGFFWIPSL GPTTI G G+ WL+PF +G PP+GW + AAYLV+P
Sbjct: 187 LSNAAKEGLLTEGFFWIPSLGGPTTI-----GGGLEWLVPFENGAPPVGWANAAAYLVMP 241
Query: 277 VLLVVSQYASMELM 290
VLLV SQYAS +++
Sbjct: 242 VLLVASQYASQKII 255
>gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
Length = 470
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 167/239 (69%), Gaps = 38/239 (15%)
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGG-WFGFISEAMEFVLKI 117
D + R E+ LYT+ADAAVS T+ADG T++ G W I+ +ME VLK
Sbjct: 54 DAGDLLGRVEAFLYTVADAAVSAADP----VVTAADGGTKEAAGDWLSGITNSMETVLKN 109
Query: 118 LKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN 177
L +VES LAM++LQP++KAIQ+RYAG+
Sbjct: 110 LA---------------------------------KVESALAMRSLQPQVKAIQERYAGD 136
Query: 178 QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
QERIQLET+RLY+ +GV+PLAGCLPTL TIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+
Sbjct: 137 QERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLA 196
Query: 238 GPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
GPTTIAARQ+G GISWL PF DGHPPLGW DT AYLVLPVLLV+SQY S ++M+PPQ+
Sbjct: 197 GPTTIAARQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISTQVMQPPQSN 255
>gi|38372242|sp|Q8S339.1|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic;
Flags: Precursor
gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii]
Length = 495
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 165/208 (79%), Gaps = 2/208 (0%)
Query: 88 AASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A ++A A Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+
Sbjct: 98 AVDSAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTY 157
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATI 207
PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATI
Sbjct: 158 PLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATI 217
Query: 208 PVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLG 265
P++IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL P DG PP+G
Sbjct: 218 PIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIG 277
Query: 266 WHDTAAYLVLPVLLVVSQYASMELMKPP 293
W D AAYL LP+LLV QYAS + PP
Sbjct: 278 WEDAAAYLTLPLLLVAVQYASSSVTSPP 305
>gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii]
Length = 495
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 165/208 (79%), Gaps = 2/208 (0%)
Query: 88 AASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A ++A A Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+
Sbjct: 98 AVDSAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTY 157
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATI 207
PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATI
Sbjct: 158 PLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATI 217
Query: 208 PVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLG 265
P++IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL P DG PP+G
Sbjct: 218 PIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIG 277
Query: 266 WHDTAAYLVLPVLLVVSQYASMELMKPP 293
W D AAYL LP+LLV QYAS + PP
Sbjct: 278 WEDAAAYLTLPLLLVAVQYASSSVTSPP 305
>gi|414873898|tpg|DAA52455.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 458
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/238 (56%), Positives = 161/238 (67%), Gaps = 43/238 (18%)
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
D + R E+LLYT+ADAAVS + + +A G W I+ +ME VLK
Sbjct: 49 DAGDLLGRVEALLYTVADAAVSAEPVAAAGTKEAA------AGDWLSSITNSMETVLK-- 100
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
VES LAM++LQP++K IQ+RYAG+Q
Sbjct: 101 -----------------------------------VESALAMRSLQPQVKTIQERYAGDQ 125
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLET+RLY+ +GV+PLAGCLPTL TIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+G
Sbjct: 126 ERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 185
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
PTTIAA+Q+G GISWL PF DGHPPLGW DT AYLVLPVLLV+SQY S ++M+PPQ+
Sbjct: 186 PTTIAAQQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISSQVMQPPQSN 243
>gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale]
Length = 483
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
Q+ GGW +++A+E VL +L++G+D +HVPY+YG++IILLT+IVK+ T+PLTK+QVES
Sbjct: 102 QRAGGWVAPLADALEQVLYVLQEGLDKLHVPYTYGYSIILLTLIVKLLTYPLTKQQVESA 161
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+A+Q L+P+I I+ R+ +++++ ETS LY AGVNPLAGCLPTLATIP++IGLY +L
Sbjct: 162 MAVQALKPRIDLIKDRFGDDKDKVSKETSALYEAAGVNPLAGCLPTLATIPIFIGLYSSL 221
Query: 218 SNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLP 276
+NVAN G L EGF+WIPSL+GPTT+A RQSG G SWLLP VDG PP+GW + AAYL LP
Sbjct: 222 TNVANAGSLDAEGFYWIPSLAGPTTLAMRQSGLGTSWLLPLVDGAPPIGWPEAAAYLSLP 281
Query: 277 VLLVVSQYASMELMKPP 293
V LV QYAS L PP
Sbjct: 282 VALVAVQYASSALTSPP 298
>gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii]
Length = 493
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 164/206 (79%), Gaps = 2/206 (0%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
++A A Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+PL
Sbjct: 98 DSAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPL 157
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATIP+
Sbjct: 158 TKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPI 217
Query: 210 WIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLGWH 267
+IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL P DG PP+GW
Sbjct: 218 FIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWE 277
Query: 268 DTAAYLVLPVLLVVSQYASMELMKPP 293
D AAYL LP+LLV QYAS + PP
Sbjct: 278 DAAAYLTLPLLLVAVQYASSSVTSPP 303
>gi|424513249|emb|CCO66833.1| predicted protein [Bathycoccus prasinos]
Length = 510
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 167/237 (70%), Gaps = 15/237 (6%)
Query: 71 LYTLADAA---VSLDSASGGAASTSADGATQKN----GGWFGFISEAMEFVLKILKDGID 123
++ +ADAA ++L+ A A+ +K+ GGW G I+ A+E L +GID
Sbjct: 116 VFEVADAASAEMTLEQAPAVDATNKPPEKEKKSALQKGGWLGPITNALESTL----EGID 171
Query: 124 AVHVPY----SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQE 179
+ P SYGF+I+ LT++VK+ TFPLTKKQ+E ++ MQ LQPK+K +Q YA + E
Sbjct: 172 GILAPVAGTNSYGFSILALTLLVKLVTFPLTKKQIEGSVNMQALQPKVKELQAMYANDPE 231
Query: 180 RIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+Q+ET+RLY++A NPLAGCLPT AT+PV+IGLY+ALSN + EGLL +GF+WIPSL GP
Sbjct: 232 RLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALSNASVEGLLQDGFYWIPSLGGP 291
Query: 240 TTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
TI R G+G SWL P VDG PP+GWHD +YLVLPVLLV+SQ S ++M+P A+
Sbjct: 292 ATIEMRNDGAGFSWLFPLVDGAPPIGWHDALSYLVLPVLLVISQSVSQKIMQPESAK 348
>gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162, partial [Chlorella
variabilis]
Length = 423
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/180 (66%), Positives = 152/180 (84%), Gaps = 5/180 (2%)
Query: 115 LKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY 174
LK+L DG++ V VPYSYGFAIILLTV+VKVAT+PLTK+QVESTL+MQ +QP++K +Q +Y
Sbjct: 108 LKVLDDGLEKVGVPYSYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKY 167
Query: 175 AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 234
A + ER+Q+ET+++Y+ AGVNPLAGCLP+LATIPV+IGLY+ALSNVA+EGLLT+GFFWIP
Sbjct: 168 ANDPERLQVETAKMYQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIP 227
Query: 235 SLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
SL+GPTT+ G+ WL + DG P LG+ TAAYLVLP+LLVVSQ S +++ PPQ
Sbjct: 228 SLAGPTTV-----NGGLDWLFKWQDGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQ 282
>gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
Length = 455
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 166/218 (76%), Gaps = 3/218 (1%)
Query: 75 ADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFA 134
AD A L+ A + A G + GGW G I++A+E L+ + DG+ VPYSYG++
Sbjct: 82 ADKAGRLEIDYDDADALKAAGI--QKGGWLGPITDALEGALRGI-DGVLDGKVPYSYGYS 138
Query: 135 IILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGV 194
I+LLTV+VK+ATFPL+K+QVES++ MQ +QP+IK +Q YA + ER+QLE +RLYR+AG
Sbjct: 139 ILLLTVLVKLATFPLSKQQVESSIQMQAMQPRIKELQAMYANDPERLQLEQARLYREAGF 198
Query: 195 NPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
NPLAGCLP AT+PV+IGLY+ALSN A E LL +GF+WIPSL GPT+IAAR G+G +WL
Sbjct: 199 NPLAGCLPLFATLPVFIGLYRALSNAAAEHLLDDGFYWIPSLGGPTSIAARNDGNGFAWL 258
Query: 255 LPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKP 292
PFVDGHPPLGW++T YLVLPVLLVVSQ+ S ++ P
Sbjct: 259 WPFVDGHPPLGWYETGCYLVLPVLLVVSQFVSQTIISP 296
>gi|384252275|gb|EIE25751.1| hypothetical protein COCSUDRAFT_12888 [Coccomyxa subellipsoidea
C-169]
Length = 324
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 153/203 (75%), Gaps = 2/203 (0%)
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
SA A ++ GW IS + + L+ ++ G+D +HVPYSYG+AII+LTV K+ TFP T
Sbjct: 10 CSALQAAAQDDGWLAPISSGLNYSLQQIQTGLDQLHVPYSYGWAIIVLTVGTKILTFPFT 69
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
K VES LA+Q L+P I AI+++Y ++ IQ ETS LY +GVNP AGCLPTLATIP++
Sbjct: 70 K--VESALAVQKLKPTIDAIKRQYGEDKNSIQRETSALYEASGVNPAAGCLPTLATIPIF 127
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTA 270
GLY+ LSNVA+ GLLTEGF+WIPSLSGPT++AA+++G+G +WL PFVDG PP+GW D A
Sbjct: 128 WGLYRTLSNVASAGLLTEGFYWIPSLSGPTSLAAQRAGTGTAWLFPFVDGAPPVGWEDAA 187
Query: 271 AYLVLPVLLVVSQYASMELMKPP 293
YL LP+ LV +Q+AS ++ PP
Sbjct: 188 RYLALPIALVAAQFASSAVISPP 210
>gi|238478612|ref|NP_001154364.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
Length = 462
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 160/228 (70%), Gaps = 39/228 (17%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+LLYT+ADAAVS A T+ T ++ WF I+ ME +LK
Sbjct: 63 ENLLYTIADAAVSSSETFESVAGTTT--KTTQSNDWFSGIANYMETILK----------- 109
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
VES +AM++L P+IKAIQ+RYAG+QE+IQLET+R
Sbjct: 110 --------------------------VESAMAMKSLTPQIKAIQERYAGDQEKIQLETAR 143
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+
Sbjct: 144 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQN 203
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
GSGISWL PF++GHPPLGW DT AYLVLP+LLV SQY S+++M+ Q+
Sbjct: 204 GSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQS 251
>gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis]
Length = 455
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
+ GGW +S AME VL + +D +D +HVPY+YG++IILLT++VK+ T+PL K+QVES L
Sbjct: 105 RAGGWVAPLSNAMEQVLYVFRDALDELHVPYAYGYSIILLTLVVKILTYPLVKQQVESAL 164
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
A+Q L+P++ I+ R+ + E+I+ ETS LY QAGVNPLAGCLPTLATIPV+IGLY +L+
Sbjct: 165 AVQALKPRVDLIKDRFGDDTEKIRKETSVLYEQAGVNPLAGCLPTLATIPVFIGLYTSLT 224
Query: 219 NVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
NVAN GLL T+GF+WIPSL+GPTT+A RQSG G SWL PFVDG PP+GW A YLVLPV
Sbjct: 225 NVANGGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPFVDGAPPIGWGAAATYLVLPV 284
Query: 278 LLVVSQYASMELMKPP 293
LLV+ QY S L PP
Sbjct: 285 LLVLVQYVSSYLTNPP 300
>gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 372
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
+ Q++Q +++ + + +ERIQLET+RLY+ + V+PLAGCLPTL TIPVWIGLY+ALS
Sbjct: 18 SFQDMQ-LMRSFCSKCSVGKERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALS 76
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVL 278
NVANEGLLTEGFFWIPSL+GPTTIAARQSG GISWL PF DGHPPLGW DT AYLVLPVL
Sbjct: 77 NVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVL 136
Query: 279 LVVSQYASMELMKPPQ 294
LV+SQY S ++M+PPQ
Sbjct: 137 LVISQYVSSQVMQPPQ 152
>gi|449019683|dbj|BAM83085.1| chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon
merolae strain 10D]
Length = 488
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
QK G W GF+ +E ++ D + A+ VP SYGFAII LT+IVK TFPL KQ++ST
Sbjct: 185 QKAGLWNGFV-HLIETIITGTGDTLAALGVPGSYGFAIIFLTIIVKAITFPLNYKQMKST 243
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+AMQ L PK++ +Q RY N + + LET+RLY++A VNPL GCLP +PVWI LY+AL
Sbjct: 244 MAMQALAPKVRELQARYRDNPQLLNLETARLYQEAKVNPLTGCLPVFVQLPVWIALYRAL 303
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
N+A + L +GFFW+PSL GP RQ SWL PF +G PP+GWHD AYLVLP
Sbjct: 304 MNLAADNRLDQGFFWLPSLEGPV----RQGQGLSSWLFPFQNGAPPIGWHDAIAYLVLPC 359
Query: 278 LLVVSQYASMELM 290
LLVVSQ S +++
Sbjct: 360 LLVVSQSISQKIL 372
>gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis]
Length = 496
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 148/216 (68%), Gaps = 23/216 (10%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQ---- 153
+K+ GW + +E VL ++DG+ V VPYSYG++I+ LT ++K+ATFPLTKKQ
Sbjct: 134 KKDNGWLQPLVTGLETVLTFIEDGLVRVGVPYSYGWSIVALTALIKLATFPLTKKQARPG 193
Query: 154 --------------VESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAG 199
VES L +Q L+P+I AI+++Y N++ +Q ETS LY +AGV+PLAG
Sbjct: 194 PGPPAPFRPCLPPRVESALNVQRLKPQIDAIKEQYGDNKDAVQRETSALYEKAGVDPLAG 253
Query: 200 CLPTLATIPVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPFV 258
CLP+LATIP++IGLY++LS+ + + + F+WIPSL+GPT++AA+++GSG +WLLP V
Sbjct: 254 CLPSLATIPIFIGLYRSLSDFSTQQEAGSAAFYWIPSLAGPTSVAAQKAGSGTAWLLPLV 313
Query: 259 DGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
DG PP+GW + YL LPV L Y S ++ PPQ
Sbjct: 314 DGVPPIGWDLASRYLALPVAL----YISNAIITPPQ 345
>gi|452822623|gb|EME29641.1| preprotein translocase, Oxa1 family [Galdieria sulphuraria]
Length = 454
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
Query: 91 TSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLT 150
TSA KN G F A++ + + ++ +PY++GF+IIL T++VK+ TFPL
Sbjct: 115 TSATTEVAKNPGLFDSFVNAIQTSVTMFHGYLEGAGLPYAWGFSIILFTILVKLVTFPLN 174
Query: 151 KKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVW 210
KQ+ESTL+MQ LQPK+K +Q Y N + + +ET++LY+++ +NPLAGCLP L IPVW
Sbjct: 175 YKQMESTLSMQALQPKVKELQALYKDNPQLLNMETAKLYKESNINPLAGCLPVLVQIPVW 234
Query: 211 IGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGI-SWLLPFVDGHPPLGWHDT 269
I LY+AL N+A+ + EGFF++PSL GP + + G G+ +WL PF DG PP+GWHD
Sbjct: 235 IALYRALLNLASTDQIHEGFFFVPSLDGPVS----RVGQGLDTWLFPFRDGAPPIGWHDA 290
Query: 270 AAYLVLPVLLVVSQY 284
YL+LP +LVVSQ+
Sbjct: 291 ICYLILPTILVVSQF 305
>gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
Length = 264
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A Q+ GW +S+A+E +L ++ + + VPYS G AII++T++VK T+PLT+ QV
Sbjct: 11 APQRMEGWLAPVSDALEDLLFAIQGQLQGLGVPYSTGNAIIIVTILVKFVTYPLTRDQVV 70
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S+L M+NLQP+I AI+++Y +QER+ E +R+Y + GVNPLAGC P L T PV GLY+
Sbjct: 71 SSLNMKNLQPQIAAIREKYEDDQERMNKEINRVYEENGVNPLAGCGPALLTFPVLAGLYR 130
Query: 216 ALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLGWHDTAAYLV 274
A +N +G E +F++PSL+GPT +SWLLP D PP+GW + + YL+
Sbjct: 131 AFNNAGIDGAFDEAWFFLPSLAGPT------DARDLSWLLPLDSDYAPPIGWEEASLYLI 184
Query: 275 LPVLLVVSQYASMELMKPPQARK 297
PVL +SQ+ SME++KP + K
Sbjct: 185 FPVLTTISQFVSMEVLKPEETEK 207
>gi|297601977|ref|NP_001051873.2| Os03g0844700 [Oryza sativa Japonica Group]
gi|255675045|dbj|BAF13787.2| Os03g0844700, partial [Oryza sativa Japonica Group]
Length = 173
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSG 248
Y+ + V+PLAGCLPTL TIPVWIGLY+ALSNVANEGLLTEGFFWIPSL+GPTTIAARQSG
Sbjct: 1 YKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSG 60
Query: 249 SGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
GISWL PF DGHPPLGW DT AYLVLPVLLV+SQY S ++M+PPQ
Sbjct: 61 QGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQ 106
>gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
Length = 453
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 149/242 (61%), Gaps = 21/242 (8%)
Query: 71 LYTLADAAVSLDSASG-----------GAASTSADG---ATQKNGGWFGFISEAMEFVLK 116
++ ++D A+++D S A+ A G A Q+ GW +S A+E +L
Sbjct: 14 VFDVSDGAIAVDGGSSMRDAMMPVQAEERAAKIASGEIQAPQRMEGWLAPVSNALEDLLF 73
Query: 117 ILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG 176
+K + + VPY G AII++T++VK+ T+PLTK QV S+L M+NLQP+I AI+++Y
Sbjct: 74 TIKGQLLDLGVPYPTGNAIIIVTILVKMVTYPLTKDQVVSSLNMKNLQPQIAAIREKYED 133
Query: 177 NQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL 236
+QER+ E +R+Y + GVNPLAGC P L + PV GLY+A +N +G E +F++PSL
Sbjct: 134 DQERMNKEINRVYEENGVNPLAGCGPALLSFPVLAGLYRAFNNAGIDGAFDEPWFFLPSL 193
Query: 237 SGPTTIAARQSGSGISWLLPF-VDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
+GPT +SWLLP D PP+GW D + YL+ P++ +SQ+ SME++KP +
Sbjct: 194 AGPT------DARDLSWLLPLDADLAPPIGWDDASLYLLFPIMTTLSQFVSMEVLKPEED 247
Query: 296 RK 297
K
Sbjct: 248 EK 249
>gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 425
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)
Query: 62 SVFSRTESLLYTLADA--AVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILK 119
SVF + L DA ++S+ A A + D A + + GWFGF++ ++ +L+ +
Sbjct: 52 SVFHDLPQQMSLLQDAFSSISVADAVAATADVAQDVAAESDSGWFGFLTIPIKLLLQAIH 111
Query: 120 DGIDAVHV-PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
+ V + S+G AI+LLT+++KV TFPLTK Q+EST MQ +QP IK +Q +Y N
Sbjct: 112 SLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNP 171
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
E + + + Y+ +NPLAGCLP++ IPV+IGLY+A+ +A L E F ++P+L G
Sbjct: 172 EVMNQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRAVLELAQANKLDESFLFLPNLEG 231
Query: 239 PTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKP 292
PT A + GS W+L + DG P LGW DT A+L+LPV LV+SQY SMELM+P
Sbjct: 232 PTYGA--EPGSAADWILKGWTDGVPSLGWPDTIAFLILPVFLVISQYLSMELMQP 284
>gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 446
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 137/205 (66%), Gaps = 6/205 (2%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVP-YSYGFAIILLTVIVKVATFP 148
++SAD Q GWFGF++ +E +LK++ G+D++ + ++G +II +TV++K TFP
Sbjct: 100 ASSADPNAQN--GWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFP 157
Query: 149 LTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIP 208
LTK Q+EST MQ LQP IK++Q +Y N E + + + +Y+ VNPLAGC+P+L IP
Sbjct: 158 LTKSQLESTNKMQALQPTIKSLQAKYQSNPEVMNQKIAEVYQTNEVNPLAGCIPSLVQIP 217
Query: 209 VWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWH 267
V+IGLY+A+ N+A E L E F ++P+L GPT A GS WL +VDG P LGW
Sbjct: 218 VFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGS--DWLFKNWVDGVPGLGWE 275
Query: 268 DTAAYLVLPVLLVVSQYASMELMKP 292
DT A+L +PV L +SQ SM +M+P
Sbjct: 276 DTIAFLSIPVFLTISQVISMNMMQP 300
>gi|412988798|emb|CCO15389.1| predicted protein [Bathycoccus prasinos]
Length = 639
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 128/200 (64%), Gaps = 9/200 (4%)
Query: 101 GGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GG FG ++++ E +L ++D A+ +PY G +II+LT +VK+ TFPLTK QV S+L M
Sbjct: 206 GGVFGLLADSFEKLLLQIQDVEKALGIPYPVGNSIIILTALVKLVTFPLTKSQVVSSLNM 265
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+NLQP++ AI+++Y + ER+ E +R+Y + VNPLAGC P + T+PV+IGLY+A N
Sbjct: 266 KNLQPQVAAIKEKYEDDPERMNSEINRIYEENEVNPLAGCGPLILTLPVFIGLYRAFKNA 325
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGH-PPL--GWHDTAAYLVLPV 277
+G+ E + +IP+LSGP+ ISWL P D PPL GW YLV+P+
Sbjct: 326 GIDGVFDEPWLFIPNLSGPS------DAQDISWLWPLDDDFAPPLDGGWEAAWPYLVMPI 379
Query: 278 LLVVSQYASMELMKPPQARK 297
L +Q+ SM M+P + K
Sbjct: 380 LTTATQFYSMNAMQPKEEEK 399
>gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
siliculosus]
Length = 449
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 118 LKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN 177
L D + ++ VP +YG +II T+ VK TFPLT +Q+ ST MQ L PK+K +Q RYA N
Sbjct: 123 LHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANN 182
Query: 178 QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
E +LY+ VNPLAGCLP LA IP++I LY++L N+A E LTE F WIPSL
Sbjct: 183 PEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLE 242
Query: 238 GPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKP 292
GPT + +SW+ + DG P LGWHDT AY+ +P++LV++Q S +M+P
Sbjct: 243 GPTFDSPPT--EMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQP 295
>gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
Length = 511
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 98 QKNGGWFGFISEAME-FVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVES 156
Q+ G +S+ +E FVL + DA V Y G +II T +VK T+P TK QVES
Sbjct: 114 QRMEGILSPVSDLLEEFVLATQRYFSDA-GVRYPLGSSIIFTTFVVKALTYPFTKVQVES 172
Query: 157 TLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA 216
L MQNLQP++ A++++Y +QE++ +E +RLY V+PLAGC P L T+PV GLY+A
Sbjct: 173 ALNMQNLQPQVNAVREKYRDDQEQMNIEINRLYEDNQVSPLAGCGPLLLTLPVVWGLYRA 232
Query: 217 LSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGH-PPLGWHDTAAYLVL 275
+N + +G E +F+IPSL+GPT ++WLLP D + PPLGWHD + YLV+
Sbjct: 233 FNNASIDGSFDEPWFFIPSLAGPT------PDRSLAWLLPLDDNYQPPLGWHDASLYLVV 286
Query: 276 PVLLVVSQYASMELMKP 292
P+L V SQY SM ++ P
Sbjct: 287 PILTVASQYVSMSILSP 303
>gi|428165483|gb|EKX34476.1| hypothetical protein GUITHDRAFT_90472 [Guillardia theta CCMP2712]
Length = 328
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 97 TQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVES 156
T+ G FG + L L + +P ++G+AI T+ VK T+PL KQ+ S
Sbjct: 108 TEDKPGVFGSFVNLIVTCLTALHTAFKSAGIPGAWGYAIATFTIFVKAVTYPLNFKQMSS 167
Query: 157 TLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA 216
T+A+Q LQPK+KAIQ RYA + + + + LYR VNPLAGCLPTL IPV+IGLY++
Sbjct: 168 TIALQQLQPKVKAIQSRYANDPQTQNEKIAELYRTENVNPLAGCLPTLIQIPVFIGLYRS 227
Query: 217 LSNVANEGLLTEGFFWIPSLSGPTTIAARQSG---SGISWLLP-FVDGHPPLGWHDTAAY 272
+ +A + LL E F WIPSL GP ++G +WL + +GHP LGW T AY
Sbjct: 228 VLQLAQKDLLEESFLWIPSLQGPVGEYNAKTGLPIDATAWLFKGWTEGHPALGWDGTLAY 287
Query: 273 LVLPVLLVVSQYASMELMK 291
L LP++LV++Q S ++++
Sbjct: 288 LSLPIILVITQTLSQKILQ 306
>gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
siliculosus]
Length = 342
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 21/269 (7%)
Query: 33 NRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRT------ESLLYTLADAA-VSLDSAS 85
+RR AS+ + I P +N+V S +++ L+DAA V L+
Sbjct: 36 DRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLE--- 92
Query: 86 GGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVA 145
A A G N W FI ++ + + K + + S+G AI+ T+ VK
Sbjct: 93 --AVEEEAKGPNPFNM-WIEFIRSSVLGINEFYK----GIGIEQSFGLAIVTFTLGVKTL 145
Query: 146 TFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLA 205
PL Q++S+ M+ LQP +K I ++ N+E T+RLY + VNPL GCLP L
Sbjct: 146 LVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALL 205
Query: 206 TIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLG 265
PV+IGLY+A+ + + +EGF W+PSL GPT ++G GI WL FVDGHP LG
Sbjct: 206 QFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGPTF----ENGRGIGWLTTFVDGHPILG 261
Query: 266 WHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
WHDT Y+ +P +LV+SQ SM L+ PP
Sbjct: 262 WHDTLCYMSIPAILVLSQKLSMTLLTPPD 290
>gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens]
Length = 219
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AI+L T+++K TFPL +Q+EST MQ LQP IK IQ +YA + +++ + + LY
Sbjct: 5 SYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIMMAELY 64
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ +NPLAGCLP L IP++I LY++L ++A E LL E F WIP+L GP
Sbjct: 65 QENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVY-----GAQ 119
Query: 250 GISWLLPFVDGH---PPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
WL F + PPLGWHDT AYL LP LLVV+Q AS L++PP
Sbjct: 120 NADWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPP 166
>gi|422293337|gb|EKU20637.1| preprotein translocase subunit YidC [Nannochloropsis gaditana
CCMP526]
Length = 485
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 103 WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQN 162
W A+E + + + ++ + +YG +II TV+VK+ T PL KQ+EST MQ
Sbjct: 109 WLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQA 168
Query: 163 LQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
+QPK+K IQ +Y + Q + ++LY VNPLAGCLP L IP++I LY+AL+N+A
Sbjct: 169 IQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAA 228
Query: 223 EGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVS 282
L E F W+P+L GPT A G++WL + P LGWHDT A+L +P++L+VS
Sbjct: 229 ANELNEPFLWLPNLEGPTYGAG--PADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVS 286
Query: 283 QYASMELMKP 292
Q S ++++P
Sbjct: 287 QSISQQILQP 296
>gi|397614204|gb|EJK62657.1| hypothetical protein THAOC_16722 [Thalassiosira oceanica]
Length = 302
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 108/156 (69%), Gaps = 3/156 (1%)
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPL 197
+TV++K+ TFPLTK Q+EST MQ LQP IK +Q +Y N E + + + +Y+ VNPL
Sbjct: 1 MTVVIKLLTFPLTKSQLESTNKMQALQPTIKGLQAKYQSNPEVMNQKIAEVYQTNDVNPL 60
Query: 198 AGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP- 256
AGC+P+L IPV+IGLY+++ N+A E L E F ++P+L GPT A GS W+L
Sbjct: 61 AGCIPSLVQIPVFIGLYRSVLNLAKENALDEPFLFLPNLEGPTYGADPAHGS--DWILKN 118
Query: 257 FVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKP 292
+VDG P LGW DT A+L +P+ LV+SQ+ SM LM+P
Sbjct: 119 WVDGVPSLGWEDTIAFLSIPIFLVISQFVSMNLMQP 154
>gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens]
Length = 366
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 14/229 (6%)
Query: 73 TLADAAVSLDSASGGAASTSADGATQ-----KNGGWFGFISEAMEFVLKILKDGI-DAVH 126
+L DAA + D+++ ST A Q ++ W+ + ++ ++ L DGI D +
Sbjct: 5 SLVDAATAFDASA--FHSTLELAAIQGRTCVEDASWWCTVQNGVQGAIEGLHDGIHDGLG 62
Query: 127 VPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLET 185
+ S+G +IIL T ++ +PL EST + L+P + I+ RY +Q+ + L T
Sbjct: 63 IKQNSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLAT 122
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAAR 245
++LY NPLAGCLP +A IPV+I LY+++ N+A + + EGFF++P+L GPT
Sbjct: 123 AKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPT----Y 178
Query: 246 QSGSGISWLLP-FVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+G GI WL +VDG P LGWHDT A+L LPV LV++Q SM ++ PP
Sbjct: 179 DNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPP 227
>gi|422294128|gb|EKU21428.1| preprotein translocase subunit YidC, partial [Nannochloropsis
gaditana CCMP526]
Length = 236
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 2/175 (1%)
Query: 118 LKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN 177
+ + ++ + +YG +II TV+VK+ T PL KQ+EST MQ +QPK+K IQ +Y +
Sbjct: 1 MHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSD 60
Query: 178 QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
Q + ++LY VNPLAGCLP L IP++I LY+AL+N+A L E F W+P+L
Sbjct: 61 PTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLE 120
Query: 238 GPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKP 292
GPT A G++WL + P LGWHDT A+L +P++L+VSQ S ++++P
Sbjct: 121 GPTYGAG--PADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQP 173
>gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans]
Length = 440
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 114/194 (58%), Gaps = 6/194 (3%)
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+K+ G FG + + + + + + V V S G +I+L TV VK+ TFPL ++Q++ T
Sbjct: 120 EKSVGPFGQFVKLIAGTILFMSNSLQKVGVEQSIGLSIVLFTVFVKLLTFPLNEQQIKGT 179
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M +QPKIK IQ +Y + + + +Y + VNPLAG LP A IP++I LY+AL
Sbjct: 180 ERMGIIQPKIKEIQAKYKDDPNKSAEKLQSVYAENQVNPLAGLLPAFAQIPIFIALYRAL 239
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAYLVLP 276
N+A +G + + F W+P+L GPT G +WL F DG P GWHDTAAYL LP
Sbjct: 240 QNLATDGQMNQPFLWLPNLEGPTF-----GPIGTNWLFTGFHDGVPQYGWHDTAAYLSLP 294
Query: 277 VLLVVSQYASMELM 290
+ L+ SQ S L+
Sbjct: 295 IFLIFSQIVSQRLL 308
>gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 467
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 14/228 (6%)
Query: 71 LYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDA----VH 126
L T+ +A L A+G AA S DG GW+G + + L + I V
Sbjct: 82 LATVHSSAQVLADAAGTAAPPSDDG------GWWGAYIQLFKTTLNAVHSTIQGPLQNVG 135
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+ S+G +I + T IV+ PL+ +Q +S +++L+P + I+ +Y NQE T+
Sbjct: 136 IEQSWGVSIAIFTTIVRTLLVPLSIEQSKSAEYIKSLKPYVADIKAKYKNNQEAQNRATA 195
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQ 246
+LY A NPLAGC L +PV++GLY+ + +A +G+L E F WIPSL GP A
Sbjct: 196 KLYEDAQQNPLAGCFVALIQLPVFLGLYRGVRLLAMDGVLEEPFLWIPSLEGPV---APP 252
Query: 247 SGSGISWLLP-FVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ G+ WL+ +V+G P LGW T A+L++PV+LVV Q +M++++PP
Sbjct: 253 NFQGLDWLVQGWVNGAPALGWETTLAFLIMPVILVVLQSVTMQVLQPP 300
>gi|383761382|ref|YP_005440364.1| hypothetical protein CLDAP_04270 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381650|dbj|BAL98466.1| hypothetical protein CLDAP_04270 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 318
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 10/197 (5%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
AT G W F+ + +L L ++ + +PYS+G++IIL T+I+K+ TFPL Q+
Sbjct: 15 ATPPEGFWQTFVVWPLANILIGLDSMLEGMGIPYSWGWSIILFTLIIKIVTFPLNLSQIR 74
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
A + LQP + +Q++Y ++ER+ E +LY++AGVNPL+GCLP L +P+ GLY
Sbjct: 75 GMQAQKELQPLLAELQKKYGKDRERLAQEQMKLYKEAGVNPLSGCLPLLIQMPILFGLYA 134
Query: 216 ALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL 275
AL V L GFFWIP LS P G+SW+ D + AY VL
Sbjct: 135 ALVAVGPM-LKDSGFFWIPDLSFPNF------ELGLSWI---ADLWSAGEYGRLLAYFVL 184
Query: 276 PVLLVVSQYASMELMKP 292
PVLL+VSQ + M P
Sbjct: 185 PVLLIVSQIFMQKWMTP 201
>gi|428175891|gb|EKX44778.1| hypothetical protein GUITHDRAFT_87257 [Guillardia theta CCMP2712]
Length = 402
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++I + +++K T+PL K + MQ +QP+I I+++Y N + I + TS L+
Sbjct: 46 NYGWSITAIVLMIKALTYPLNYKVYAAQFEMQAIQPEIDKIKEQYKDNPDLINMRTSVLF 105
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
+ VNPLAGCLP L P++I LY+ L N+ + +L E F ++PSL GP
Sbjct: 106 AEKEVNPLAGCLPILIQFPIFIALYRTLLNLGKDRMLGEPFLFLPSLEGPVVAGLPTDYV 165
Query: 250 GIS----WLLP-FVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
G+ WLL + +G PPLGWHDT Y LP+L+VV+Q S + K Q K
Sbjct: 166 GVREDAPWLLQNWQNGAPPLGWHDTIIYCALPILIVVAQLVSTSITKAGQPAK 218
>gi|414873895|tpg|DAA52452.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 313
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 66/74 (89%)
Query: 223 EGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVS 282
+GLLTEGFFWIPSL+GPTTIAA+Q+G GISWL PF DGHPPLGW DT AYLVLPVLLV+S
Sbjct: 25 QGLLTEGFFWIPSLAGPTTIAAQQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVIS 84
Query: 283 QYASMELMKPPQAR 296
QY S ++M+PPQ+
Sbjct: 85 QYISSQVMQPPQSN 98
>gi|357058356|ref|ZP_09119210.1| hypothetical protein HMPREF9334_00927 [Selenomonas infelix ATCC
43532]
gi|355374209|gb|EHG21510.1| hypothetical protein HMPREF9334_00927 [Selenomonas infelix ATCC
43532]
Length = 224
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++KV T+PLT KQ++S AMQ +QPK+K IQ++Y N + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQIKSMKAMQEIQPKMKKIQEKYKSNPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+AGVNPLAGCLP L +P+ +G+Y AL N FFW+P++S P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPNMSEP 143
>gi|334127024|ref|ZP_08500960.1| stage III sporulation protein J [Centipeda periodontii DSM 2778]
gi|333390326|gb|EGK61466.1| stage III sporulation protein J [Centipeda periodontii DSM 2778]
Length = 224
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++KV T+PLT KQ++S AMQ +QPK+K IQ++Y N + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQIKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+AGVNPLAGCLP L +P+ +G+Y AL N FFW+P++S P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAAAFFWLPNMSEP 143
>gi|427406676|ref|ZP_18896881.1| YidC/Oxa1 family membrane protein insertase [Selenomonas sp. F0473]
gi|425708106|gb|EKU71147.1| YidC/Oxa1 family membrane protein insertase [Selenomonas sp. F0473]
Length = 225
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 77/110 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLTV++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y + +Q +T L+
Sbjct: 34 SYGFPIILLTVLIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R AGVNPLAGCLP L +P+ +G+Y AL N A E F W+P LS P
Sbjct: 94 RAAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWLPHLSAP 143
>gi|401564012|ref|ZP_10804935.1| 60Kd inner membrane protein [Selenomonas sp. FOBRC6]
gi|400189293|gb|EJO23399.1| 60Kd inner membrane protein [Selenomonas sp. FOBRC6]
Length = 223
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++KV T+PLT KQV+S AMQ +QPK+K IQ++Y N + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R++GVNPLAGCLP L +P+ +G+Y AL N FFW+P++S P
Sbjct: 94 RESGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAAAFFWLPNMSEP 143
>gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens]
Length = 196
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AI+L T+++K TFPL +Q+EST MQ LQP IK IQ +YA + +++ + + LY
Sbjct: 10 SYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIMMAELY 69
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ +NPLAGCLP L IP++I LY++L ++A E LL E F WIP+L GP
Sbjct: 70 QENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVY-----GAQ 124
Query: 250 GISWLLPF 257
WL F
Sbjct: 125 NADWLFKF 132
>gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
Length = 407
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 16/195 (8%)
Query: 112 EFVLKILKDGIDAVH------------VPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
E ++I K+G+ VH ++G +I L T V+ P + +Q +S+
Sbjct: 59 ESYIQIYKNGLAFVHDNIVDEPLRKLGFDQTWGVSIFLFTAGVRALLVPFSIQQSKSSEY 118
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ L+P + I+++Y ++ S+L+ A NPLAGC+ + A IP+++GLY++++
Sbjct: 119 MKALKPYQQKIKEKYT-DKNMQNRAISKLFEDAQANPLAGCVTSFAQIPIFLGLYRSVTR 177
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAYLVLPVL 278
+A EG L E F WIPSL GP T A + G WL +VDG PPL W T A+ V+PVL
Sbjct: 178 LAQEGRLDEPFLWIPSLQGPVT--AETNYRGTEWLTQGWVDGVPPLSWETTLAFCVMPVL 235
Query: 279 LVVSQYASMELMKPP 293
LV+ Q +M +++ P
Sbjct: 236 LVLGQSFTMNVLQQP 250
>gi|375086753|ref|ZP_09733151.1| YidC/Oxa1 family membrane protein insertase [Megamonas funiformis
YIT 11815]
gi|374564292|gb|EHR35591.1| YidC/Oxa1 family membrane protein insertase [Megamonas funiformis
YIT 11815]
Length = 226
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F I + +EF+L I D + V + SYG AII+LT+I+K+A +PLT KQV+S AMQ L
Sbjct: 8 FNPIVQLLEFILGIFHDFLSTVGLE-SYGVAIIVLTIIIKMAFYPLTVKQVKSMKAMQEL 66
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QPK+K +Q ++ + +R+Q E LY+ AGVNPLAGCLP LA +P+ + ++ AL ++
Sbjct: 67 QPKMKKLQDKFKNDPKRLQQEMGMLYKNAGVNPLAGCLPLLAQMPILMAMFYALQSIDYG 126
Query: 224 GLLTEGFFWIPSLSGP 239
G F WI +LS P
Sbjct: 127 G--DPTFLWIMNLSNP 140
>gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
Length = 222
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%), Gaps = 5/142 (3%)
Query: 102 GWFGFISEAME----FVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
G+FG I E +E VL+ L + DA + SYG AIILLT+++K+ +PLT KQV+S
Sbjct: 2 GFFGTIFEPIENLLHVVLQALYNVTDAAGIG-SYGVAIILLTILIKMMLYPLTVKQVKSM 60
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ L PK+K IQ++Y N + +Q + LY++AGVNPLAGCLP L +P+ +G+Y AL
Sbjct: 61 KAMQELSPKMKKIQEKYKDNPQVMQQKVGALYKEAGVNPLAGCLPLLIQMPILMGMYYAL 120
Query: 218 SNVANEGLLTEGFFWIPSLSGP 239
N + F W+P++S P
Sbjct: 121 YNFTYPTPESAAFLWLPNMSDP 142
>gi|397643408|gb|EJK75844.1| hypothetical protein THAOC_02424 [Thalassiosira oceanica]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 111/194 (57%), Gaps = 15/194 (7%)
Query: 112 EFVLKILKDGIDAVH-----------VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
E ++I K+G+ VH ++G +I L T V+ P + Q +ST
Sbjct: 48 EKYIQIYKNGLALVHDTIDGPLRDAGFTQTWGISIALFTAGVRALLIPFSISQNKSTEYS 107
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ L+P K I+++Y+ ++ S+LY A NPLAGC+ + A IP+++GLY++++ +
Sbjct: 108 KALKPYQKKIKEKYS-DKNMQNRAISKLYEDAEQNPLAGCITSFAQIPIFLGLYRSVTRL 166
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAYLVLPVLL 279
A E L E F WIPSL GP ++A + G+ WL + +G P +GW T +L++PV+L
Sbjct: 167 AAESRLDEPFLWIPSLEGP--VSAENNYRGMQWLTEGWSNGAPSMGWEGTLPFLIMPVVL 224
Query: 280 VVSQYASMELMKPP 293
V+ Q +M+L++ P
Sbjct: 225 VIMQSITMQLLQQP 238
>gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 223
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G F + M + +L D++ +P +YG AIILLTVI+K+ +PLTKKQ+ S +MQ
Sbjct: 2 GIFNSLVAGMSDFINMLYKLTDSIGIP-NYGLAIILLTVIIKMLLYPLTKKQMLSMRSMQ 60
Query: 162 NLQPKIKAIQQRYAGN--QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
LQPKIK +Q +Y G Q+ +Q +T LY++ +NP+AGCLP L +P+ I LY+AL N
Sbjct: 61 QLQPKIKELQNKYKGKDQQQIMQQKTMELYKEHNINPMAGCLPLLIQMPILIALYRALYN 120
Query: 220 VANEGLLTEGFFWIPSLSG 238
F W+P+LS
Sbjct: 121 FKYLNTAHANFLWVPNLSN 139
>gi|348025751|ref|YP_004765556.1| OxaA-like protein [Megasphaera elsdenii DSM 20460]
gi|341821805|emb|CCC72729.1| putative OxaA-like protein [Megasphaera elsdenii DSM 20460]
Length = 229
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 7/141 (4%)
Query: 105 GFISEAMEFVLKILKDGIDAVH-----VPY-SYGFAIILLTVIVKVATFPLTKKQVESTL 158
GF S M+ + I+ ++ + V Y SYG AII+LT+I+K+ PLT KQ+ S
Sbjct: 2 GFFSGIMDVLSGIMTTFMNYCYAFTQNVGYPSYGAAIIMLTLIIKLVLAPLTAKQIRSME 61
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
MQ LQPKIK +Q++Y GNQ+++Q E ++LYR+ GVNPL+GCLP L +P I ++ AL
Sbjct: 62 GMQTLQPKIKELQKKYKGNQKKMQEEMTKLYREMGVNPLSGCLPILIQMPFLIAIFYALR 121
Query: 219 NVANEGLLTEGFFWIPSLSGP 239
+ E F W+PSL P
Sbjct: 122 EYPYDPAF-ESFLWLPSLGQP 141
>gi|390562153|ref|ZP_10244398.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
gi|390173276|emb|CCF83699.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
Length = 350
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 91/132 (68%), Gaps = 5/132 (3%)
Query: 110 AMEFVLKILKDGID--AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKI 167
A + + ++ G+D AVH S G AII+ TV+VK PLT K V ST +MQ +QPKI
Sbjct: 3 AWHWFVNLIASGLDFLAVHTG-SAGLAIIVFTVLVKTVLLPLTVKSVRSTSSMQAIQPKI 61
Query: 168 KAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE--GL 225
K +Q+++AG++ ++Q E +LY++ G+NPL+GCLP + +P++ GLY A+ +++N+ GL
Sbjct: 62 KDLQKKHAGDRAKLQAEQMKLYQEHGINPLSGCLPMVLQMPIFFGLYYAIRHLSNDAVGL 121
Query: 226 LTEGFFWIPSLS 237
+ F W+PSL+
Sbjct: 122 WGQPFLWLPSLA 133
>gi|383755651|ref|YP_005434554.1| putative preprotein translocase YidC subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381367703|dbj|BAL84531.1| putative preprotein translocase YidC subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 225
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I + FVL+ L A SYG+AIILLT+IVK+A +PLT KQV+S AMQ L PK
Sbjct: 11 IESLLRFVLETLYAITSAAGFA-SYGWAIILLTIIVKMALYPLTVKQVKSMKAMQELSPK 69
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL 226
+K IQ++Y N + +Q + LY+ AGVNPLAGCLP L +P+ +G+Y +L N +
Sbjct: 70 MKKIQEKYKDNPQVMQQKIGALYKDAGVNPLAGCLPLLIQMPILMGMYYSLYNFSYPTPE 129
Query: 227 TEGFFWIPSLSGP 239
+ F W+ S+S P
Sbjct: 130 SAYFLWMTSMSEP 142
>gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium
succinatutens YIT 12067]
Length = 214
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
F++ ++ VL +L + ++V +P + G AI+L+T+I+K+ +PLT+KQ++ST AM +QP
Sbjct: 3 FLANIVQQVLTVLYNFTESVGIP-NLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQP 61
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS--NVANE 223
K+KA+Q++Y +++R+ +E + LY+ GVNPLAGCLP L +P+ IG++ + N A
Sbjct: 62 KMKALQEKYKDDKQRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYAAH 121
Query: 224 GLLTEGFFWIPSLS 237
+ F W+ +S
Sbjct: 122 PEIVTSFLWLADIS 135
>gi|339498652|ref|YP_004696687.1| membrane protein oxaA [Spirochaeta caldaria DSM 7334]
gi|338833001|gb|AEJ18179.1| Membrane protein oxaA [Spirochaeta caldaria DSM 7334]
Length = 605
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 20/157 (12%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT++VK+A FPLTKK EST+ MQ L PKIK IQ +Y N ++ E + LY
Sbjct: 382 NYGIAIILLTILVKLAMFPLTKKGSESTIRMQELAPKIKEIQDKYKDNPTKMNTEMAELY 441
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLSGPTTIAARQ 246
++ G NP+AGCLP L IP++ +Y +N + L F WIP LS P ++ +
Sbjct: 442 KKEGYNPMAGCLPMLLQIPIFFAMYNLFNNHFD---LRGAMFIPGWIPDLSLPESVFS-- 496
Query: 247 SGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
P+ P L W D +LP + +VSQ
Sbjct: 497 -------FAPY--KIPLLNWSDIR---LLPFIYLVSQ 521
>gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
Length = 312
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 112 EFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQ 171
+FV I V S G AIIL T+++K PLT K V ST AMQ LQPKI+ +Q
Sbjct: 6 QFVYAIEWGLARTAEVTGSAGLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPKIRELQ 65
Query: 172 QRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN--VANEGLLTEG 229
++Y +++R+ E +LY++ G+NP++GCLP L IPV+ GLY A+ N ++ G G
Sbjct: 66 KKYGQDRQRLSAEMMKLYQEHGINPMSGCLPMLLQIPVFFGLYFAIRNLSLSQVGAWAHG 125
Query: 230 FFWIPSLSGP 239
F WIP L+ P
Sbjct: 126 FLWIPDLAKP 135
>gi|333999779|ref|YP_004532391.1| inner membrane protein OxaA [Treponema primitia ZAS-2]
gi|333741513|gb|AEF87003.1| inner membrane protein OxaA [Treponema primitia ZAS-2]
Length = 600
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 88/158 (55%), Gaps = 23/158 (14%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT++VK FPLTKK ESTL MQ+L PKIK IQ +Y N +++ E LY
Sbjct: 373 NYGAAIILLTILVKAIMFPLTKKGSESTLRMQSLSPKIKEIQDKYKDNPQKMNAEMGELY 432
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF----WIPSLSGPTTIAAR 245
++ G NPL+GCLP + +P++ +Y N+ N G WIP LS P +I
Sbjct: 433 KKEGYNPLSGCLPMIIQLPIFFAMY----NLFNTHFDLRGAMFIPGWIPDLSLPESI--- 485
Query: 246 QSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
W +PF P LGW + VLP L V SQ
Sbjct: 486 -------WTMPF--KVPLLGWSNLR---VLPFLYVGSQ 511
>gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049898|ref|ZP_08542881.1| membrane protein insertase, YidC/Oxa1 family [Megasphaera sp. UPII
199-6]
gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333762027|gb|EGL39543.1| membrane protein insertase, YidC/Oxa1 family [Megasphaera sp. UPII
199-6]
Length = 223
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 126 HVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLE 184
H+ Y SYG AII+LT+I+K PLT KQ++S MQ +QPKIK +Q++Y GNQ+++Q E
Sbjct: 26 HIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQGMQVIQPKIKELQKKYKGNQKKLQEE 85
Query: 185 TSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
+LY++ GVNPL+GCLP + +P I ++ AL N + E F W+PSL P
Sbjct: 86 MRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRNYPYDPHF-ESFLWLPSLGSP 139
>gi|390559291|ref|ZP_10243639.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
gi|390174130|emb|CCF82932.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
Length = 320
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S G +II+ T+++K P T K V ST +MQ +QPKIK +Q++YAG++ +IQ E +LY
Sbjct: 24 SAGLSIIIFTILIKTVLLPFTIKSVRSTSSMQAMQPKIKELQKKYAGDKAKIQAEQMKLY 83
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE--GLLTEGFFWIPSLS 237
++ GVNP++GCLP L +P++ GLY A+ N++ GL T+ F W+PS++
Sbjct: 84 QEHGVNPVSGCLPMLVQVPIFFGLYYAIINLSRHGGGLWTQSFLWLPSMA 133
>gi|430741773|ref|YP_007200902.1| membrane protein insertase [Singulisphaera acidiphila DSM 18658]
gi|430013493|gb|AGA25207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
protein [Singulisphaera acidiphila DSM 18658]
Length = 752
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 16/164 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT++V++ FPL +KQ + MQ+LQP +K IQ++Y ++ER ET LY
Sbjct: 462 NYGIAIILLTLLVRMIMFPLGRKQALAAKKMQDLQPLLKEIQEKYKDDKERQTKETFALY 521
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ GVNP+ GCLP L +P+++GL+QAL+N + L F +I +L+ P +
Sbjct: 522 KKHGVNPVGGCLPALIQLPIFVGLWQALNNSVH--LRHASFLYIQNLAAPDML------- 572
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ PF G P LG + + +LP L+V +L PP
Sbjct: 573 ---FKFPFPGGLPLLGEY----FNLLPFLVVSLMLVQTKLFAPP 609
>gi|402303974|ref|ZP_10823053.1| putative stage III sporulation protein J [Selenomonas sp. FOBRC9]
gi|400375900|gb|EJP28793.1| putative stage III sporulation protein J [Selenomonas sp. FOBRC9]
Length = 225
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 78/110 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RQAGVNPLAGCLP L +P+ +G+Y AL N A E F WIP LS P
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAP 143
>gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399]
gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399]
Length = 225
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 78/110 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RQAGVNPLAGCLP L +P+ +G+Y AL N A E F WIP LS P
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAP 143
>gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
str. F0430]
Length = 225
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 78/110 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
RQAGVNPLAGCLP L +P+ +G+Y AL N A E F WIP LS P
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAP 143
>gi|421075119|ref|ZP_15536134.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
JBW45]
gi|392526561|gb|EIW49672.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
JBW45]
Length = 212
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
++ +L D ++ +P +YG AIIL+T+I+K+ +PLT KQV+ AMQ+LQPK+K +
Sbjct: 11 LQHILTFFYDMTASIGIP-NYGIAIILVTLIIKLLLYPLTVKQVKGMKAMQDLQPKMKEL 69
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q++Y GN E++ E + LY+++GVNPL+GCLP L +P+ +G++ A+ + + F
Sbjct: 70 QEKYKGNPEKLNKEMALLYKESGVNPLSGCLPLLVQMPILMGIFFAIRDYQYAQI--PSF 127
Query: 231 FWIPSLSGP 239
WI +LS P
Sbjct: 128 LWIANLSHP 136
>gi|392961588|ref|ZP_10327044.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
DSM 17108]
gi|421055502|ref|ZP_15518465.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B4]
gi|421060332|ref|ZP_15522827.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B3]
gi|421067272|ref|ZP_15528770.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A12]
gi|421072384|ref|ZP_15533495.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A11]
gi|392439885|gb|EIW17586.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B4]
gi|392446021|gb|EIW23323.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A11]
gi|392450040|gb|EIW27094.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A12]
gi|392453596|gb|EIW30468.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
DSM 17108]
gi|392457357|gb|EIW34033.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B3]
Length = 212
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
++ +L D ++ +P +YG AIIL+T+I+K+ +PLT KQV+ AMQ+LQPK+K +
Sbjct: 11 LQHILTFFYDMTASIGIP-NYGIAIILVTLIIKLLLYPLTVKQVKGMKAMQDLQPKMKEL 69
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q++Y GN E++ E + LY+++GVNPL+GCLP L +P+ +G++ A+ + + F
Sbjct: 70 QEKYKGNPEKLNKEMALLYKESGVNPLSGCLPLLVQMPILMGIFFAIRDYQYAQI--PSF 127
Query: 231 FWIPSLSGP 239
WI +LS P
Sbjct: 128 LWIANLSHP 136
>gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
Length = 699
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 24/212 (11%)
Query: 89 ASTSADGATQKNGGW--FGFISEAMEFV---LKILKDGIDAVHVPYSYGFAIILLTVIVK 143
A+ A T+ + GW F F+ + + + L +G+ A+ + +YG AIILLT+IV+
Sbjct: 399 AAVGAADVTEYHIGWNPFFFLEPLVRLLVIPMLALLNGLHALGI--NYGIAIILLTIIVR 456
Query: 144 VATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPT 203
PLT+KQ +S M+ +QPK+K +Q+++AG+ + ++ LY + G NPLAGC P
Sbjct: 457 TCLMPLTRKQAQSAQRMKEMQPKLKELQKKFAGDADGLRRAQLELYSKHGFNPLAGCWPV 516
Query: 204 LATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPP 263
L +P++ LY+ALS + L F WI +L+ P + + LPF P
Sbjct: 517 LLQMPIFFALYRALSVSVD--LRRASFLWIDNLAAPDAL----------FELPF--RVPF 562
Query: 264 LGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
LGW + + +LP+L ++ A +++ PP A
Sbjct: 563 LGWTE---FNLLPILTIILFVAQQKILMPPPA 591
>gi|414154095|ref|ZP_11410415.1| Membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454280|emb|CCO08319.1| Membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 230
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I M ++ L + + VP SY AIILLTVI+KVA +PL+KKQ+ S + MQ
Sbjct: 3 GWFDAIVNGMTALMNWLYELTVNIGVP-SYALAIILLTVIIKVALYPLSKKQMHSMVMMQ 61
Query: 162 NLQPKIKAIQQRYAGNQ-ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
L P+IKAIQ +Y + +Q + LY++ VNP+AGCLP L +P+ I LY+AL
Sbjct: 62 KLAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAF 121
Query: 221 ANEGLLTEGFFWIPSLS 237
+ FFW+ SLS
Sbjct: 122 PFKNPDHAHFFWVTSLS 138
>gi|374813176|ref|ZP_09716913.1| membrane protein insertase [Treponema primitia ZAS-1]
Length = 610
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 92/172 (53%), Gaps = 24/172 (13%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT++VKV FPLTKK ESTL MQ L PKIK +Q++Y N +++ E LY
Sbjct: 383 NYGVAIILLTLLVKVVMFPLTKKGTESTLRMQTLSPKIKELQEKYKDNPQKMNAEMGALY 442
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF----WIPSLSGPTTIAAR 245
++ G NPL+GCLP L P++ +Y N+ N G WIP LS P +I
Sbjct: 443 KKEGYNPLSGCLPMLVQFPIFFAMY----NLFNTHFDLRGAMFIPGWIPDLSLPESI--- 495
Query: 246 QSGSGISW-LLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
W PF P LGW + A LP + V SQ ++ + P +
Sbjct: 496 -------WSFAPF--QLPLLGWSNLRA---LPFIYVGSQLLYGKVTQTPDQK 535
>gi|403049497|ref|ZP_10903981.1| membrane protein insertase, partial [SAR86 cluster bacterium
SAR86D]
Length = 381
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FIS+ M + L ++ + +D S+ F+II+ T+++K+ FP+T K S M+
Sbjct: 180 GWFWFISQPMVWFLDLINEYVD------SWAFSIIIFTLLLKLVLFPVTAKGFVSMAGMR 233
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ PK+K IQ RY +++R E LY++ GVNPL GCLP LA +P +IG + AL +
Sbjct: 234 KIGPKMKDIQDRYKNDRQRASAEVMALYKKEGVNPLGGCLPVLAQMPFFIGFFFALREMV 293
Query: 222 NEGLLTEGFFWIPSLSGP 239
L F+WI LS P
Sbjct: 294 E--LRHASFYWISDLSIP 309
>gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
nigrificans DSM 574]
gi|333924893|ref|YP_004498473.1| YidC/Oxa1 family membrane protein insertase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
nigrificans DSM 574]
gi|333750454|gb|AEF95561.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 229
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF +I M ++ +L + VP SY AII+LTVI+K+A +PL+KKQ+ S + MQ
Sbjct: 3 GWFDYIKTGMTDLMNLLYGFTVQIGVP-SYALAIIILTVIIKMALYPLSKKQMRSMVMMQ 61
Query: 162 NLQPKIKAIQQRYAGNQ-ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
L P+IK IQ +Y G +++Q LY++ VNP+AGCLP L +P+ I LY+AL
Sbjct: 62 KLAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALYAF 121
Query: 221 ANEGLLTEGFFWIPSLS 237
+ F W+ SLS
Sbjct: 122 PFKNPAHAHFLWVESLS 138
>gi|403049342|ref|ZP_10903826.1| membrane protein insertase [SAR86 cluster bacterium SAR86D]
Length = 520
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FIS+ M + L ++ + +D S+ F+II+ T+++K+ FP+T K S M+
Sbjct: 305 GWFWFISQPMVWFLDLINEYVD------SWAFSIIIFTLLLKLVLFPVTAKGFVSMAGMR 358
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ PK+K IQ RY +++R E LY++ GVNPL GCLP LA +P +IG + AL +
Sbjct: 359 KIGPKMKDIQDRYKNDRQRASAEVMALYKKEGVNPLGGCLPVLAQMPFFIGFFFALREMV 418
Query: 222 NEGLLTEGFFWIPSLSGP 239
L F+WI LS P
Sbjct: 419 E--LRHASFYWISDLSIP 434
>gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 649
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG+AI++ ++ K+A +PL KKQ ES MQ L P+IK I ++YA + + Q +T LY
Sbjct: 421 NYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKLINEKYADDPKLKQEKTIELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NP+AGCLP L IP++I LY A S+ + L F WI LS P T+
Sbjct: 481 KKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVD--LWNSPFLWIKDLSEPDTVFTT---- 534
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
P L + T A +LP+++V +Q
Sbjct: 535 ------------PKLAFIGTLAINILPLIMVATQ 556
>gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
Length = 332
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S G ++I+ T+++K PLT K V ST AMQ +QPK+K +Q++Y +++R+ ET +LY
Sbjct: 24 SAGLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKELQKKYGKDRQRLSQETMKLY 83
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLT--EGFFWIPSLS 237
++ G+NP AGCLP L +P+ GLY+A+ +++ G T EGF W+PSL+
Sbjct: 84 QEHGINPAAGCLPMLLQLPILFGLYEAIRSLSQAGTGTWGEGFMWLPSLA 133
>gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 224
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ++QPK+K IQ++Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQDIQPKMKKIQEKYKHDPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+AGVNPLAGCLP L +P+ +G+Y AL N FFW+PS+S P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEP 143
>gi|333993181|ref|YP_004525794.1| inner membrane protein OxaA [Treponema azotonutricium ZAS-9]
gi|333735222|gb|AEF81171.1| inner membrane protein OxaA [Treponema azotonutricium ZAS-9]
Length = 615
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 18/156 (11%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIIL+T++VK+ FPLTKK EST+ MQ L PKIK IQ++Y N +++ E + Y
Sbjct: 386 NYGVAIILVTLLVKLIMFPLTKKGSESTMRMQTLSPKIKEIQEKYKDNPQKMNAEMAAFY 445
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN--EGLLTEGFFWIPSLSGPTTIAARQS 247
++ G NPL+GCLP + IP++ +Y +N + + G WIP LS P ++
Sbjct: 446 KKEGYNPLSGCLPMIIQIPIFFAMYNLFNNHFDLRGAMFIPG--WIPDLSLPESVY---- 499
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
+ + LPF LGW D +LP + V SQ
Sbjct: 500 -NFAPFKLPF------LGWSDIR---LLPFIYVGSQ 525
>gi|342218819|ref|ZP_08711422.1| stage III sporulation protein J family protein [Megasphaera sp.
UPII 135-E]
gi|341588766|gb|EGS32141.1| stage III sporulation protein J family protein [Megasphaera sp.
UPII 135-E]
Length = 223
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 126 HVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLE 184
H Y SYG AII+LTVI+K+ PLT KQ++S MQ +QPKIK +Q++Y GNQ+++Q E
Sbjct: 26 HAGYPSYGIAIIMLTVIIKLILSPLTAKQIKSMQGMQVIQPKIKELQKKYKGNQKKLQEE 85
Query: 185 TSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
+LY++ GVNPL+GCLP + +P I ++ AL + E F W+ SL P
Sbjct: 86 MRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRTYPYDPAF-ESFLWLSSLGAP 139
>gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
43531]
gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
43531]
Length = 224
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKSDPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+AGVNPLAGCLP L +P+ +G+Y AL N FFW+PS+S P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEP 143
>gi|378973468|ref|YP_005222074.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|378974534|ref|YP_005223142.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. Gauthier]
gi|378982443|ref|YP_005230750.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. CDC2]
gi|374677793|gb|AEZ58086.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|374678862|gb|AEZ59154.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. CDC2]
gi|374679931|gb|AEZ60222.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. Gauthier]
Length = 622
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+ +KV FPLTK+ + MQ LQP ++ IQ+RY GN ++I E ++LY
Sbjct: 416 NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLY 475
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+A NPL+GCLPTL +P+ +Y+ +N +WIP LS ++
Sbjct: 476 REAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLADSV------- 528
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
W LPF P W +LPVL VVSQ +L + P +
Sbjct: 529 ---WTLPF--ALPVTQWTQMR---MLPVLYVVSQIMFSKLTQVPHTEQ 568
>gi|338706895|ref|YP_004673663.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
paraluiscuniculi Cuniculi A]
gi|335344956|gb|AEH40872.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
paraluiscuniculi Cuniculi A]
Length = 622
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+ +KV FPLTK+ + MQ LQP ++ IQ+RY GN ++I E ++LY
Sbjct: 416 NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLY 475
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+A NPL+GCLPTL +P+ +Y+ +N +WIP LS ++
Sbjct: 476 REAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLADSV------- 528
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
W LPF P W +LPVL VVSQ +L + P +
Sbjct: 529 ---WTLPF--ALPVTQWTQMR---MLPVLYVVSQIMFSKLTQVPHTEQ 568
>gi|408792016|ref|ZP_11203626.1| 60Kd inner membrane protein [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408463426|gb|EKJ87151.1| 60Kd inner membrane protein [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 628
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 18/154 (11%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG+AI++ ++ K+A +PL KKQ ES MQ L P+IK I ++YA + + Q +T LY
Sbjct: 400 NYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKLINEKYADDPKLKQEKTVELY 459
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NP+AGCLP L IP++I LY A S+ + L F WI LS P T+
Sbjct: 460 KKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVD--LWNSPFLWIKDLSEPDTVYTT---- 513
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
P L + A +LP+++V +Q
Sbjct: 514 ------------PKLAFIGALAINILPLIMVATQ 535
>gi|378975591|ref|YP_005224201.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum DAL-1]
gi|384422438|ref|YP_005631797.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum
str. Chicago]
gi|38502857|sp|O66103.2|YIDC_TREPA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374680991|gb|AEZ61281.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum DAL-1]
Length = 622
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+ +KV FPLTK+ + MQ LQP ++ IQ+RY GN ++I E ++LY
Sbjct: 416 NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLY 475
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+A NPL+GCLPTL +P+ +Y+ +N +WIP LS ++
Sbjct: 476 REAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLADSV------- 528
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
W LPF P W +LPVL VVSQ +L + P +
Sbjct: 529 ---WTLPF--ALPVTQWTQMR---MLPVLYVVSQIMFSKLTQVPHTEQ 568
>gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
Length = 210
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 24/177 (13%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
F+S ++ V+ + + + P SYG AII++T+++K+ +PLTK+Q+ ST AM +QP
Sbjct: 3 FLSSFVQQVVSAIYEATRMIGEP-SYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQP 61
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
++K +Q RY ++ ++ E S+LY++ GVNPLAGCLP + +P+ IG++ + + EG
Sbjct: 62 RMKELQMRYRDDKMKLNEELSKLYKKEGVNPLAGCLPLVIQMPIMIGIFYGIRDFNYEG- 120
Query: 226 LTEGFFWIPSLSGP-------------TTIAARQS--------GSGISWLLPFVDGH 261
F W+ S+ P T I +RQS G + + +P G+
Sbjct: 121 -PSSFLWMQSIGQPDPYYILPILSALTTYIQSRQSMPPSDNPTGKVMLYFMPLFIGY 176
>gi|15639934|ref|NP_219385.1| inner membrane protein translocase component YidC [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema
pallidum subsp. pallidum SS14]
gi|408502795|ref|YP_006870239.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum str. Mexico A]
gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols]
gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14]
gi|408476158|gb|AFU66923.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum str. Mexico A]
Length = 665
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+ +KV FPLTK+ + MQ LQP ++ IQ+RY GN ++I E ++LY
Sbjct: 459 NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLY 518
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+A NPL+GCLPTL +P+ +Y+ +N +WIP LS ++
Sbjct: 519 REAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLADSV------- 571
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
W LPF P W +LPVL VVSQ +L + P +
Sbjct: 572 ---WTLPF--ALPVTQWTQMR---MLPVLYVVSQIMFSKLTQVPHTEQ 611
>gi|402574988|ref|YP_006624331.1| preprotein translocase subunit YidC [Desulfosporosinus meridiei DSM
13257]
gi|402256185|gb|AFQ46460.1| preprotein translocase subunit YidC [Desulfosporosinus meridiei DSM
13257]
Length = 224
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I EAM ++LKIL AV +PY YG AIILLT+++K FPLT KQ+ S +LQPK
Sbjct: 4 IVEAMTYLLKILYSFSTAVGLPY-YGVAIILLTMLIKTLIFPLTYKQMASMRKTVDLQPK 62
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
IKAIQ++Y N+E+ LY++ VNPL GCLP + +P++ LY AL
Sbjct: 63 IKAIQEKYKNNKEKANAAVMELYKEHNVNPLGGCLPIVVQLPIFWALYSAL 113
>gi|342214904|ref|ZP_08707574.1| 60Kd inner membrane protein [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590206|gb|EGS33452.1| 60Kd inner membrane protein [Veillonella sp. oral taxon 780 str.
F0422]
Length = 212
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIILLT+++K+ PLT+KQV+S M LQPK+KAIQ +Y N ++ Q E ++Y
Sbjct: 29 SYGIAIILLTIVIKLILAPLTQKQVQSMKGMAELQPKMKAIQDKYKDNPQKAQQEIMKMY 88
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ G+NPLAGCLP L +P I ++ AL + + F W+P+LS P I
Sbjct: 89 KELGINPLAGCLPLLVQMPFLIAIFYALQGYPYDPQYAQ-FLWLPNLSDPDPI 140
>gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile
QCD-23m63]
gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
Length = 235
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I + +LK++ + ++ YG +IIL T++VK+ PLT KQ +ST AMQ++QP+
Sbjct: 4 IGNFLGLILKVIFEFVN------HYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPR 57
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL 226
IK IQ++Y E+ E +LY +A +NPL+GCLP L P+ IGL+ L G+
Sbjct: 58 IKEIQEKYKNKPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVF 117
Query: 227 T---------EGFFWIPSLSGPTTIAARQSGS 249
GF WI SL+ P I A SG+
Sbjct: 118 ANKAAFLAADNGFLWIKSLTSPDYILAVFSGA 149
>gi|365838859|ref|ZP_09380116.1| stage III sporulation protein J family protein [Anaeroglobus
geminatus F0357]
gi|364566369|gb|EHM44061.1| stage III sporulation protein J family protein [Anaeroglobus
geminatus F0357]
Length = 217
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII+LTVI+K+ PLT KQ+ S MQ LQPKIK +Q++Y GNQ+++Q E S+LY
Sbjct: 26 SYGIAIIMLTVIIKLILSPLTAKQIRSMEGMQLLQPKIKELQKKYKGNQKKLQEEMSKLY 85
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++ GVNP +GCLP L +P + ++ AL + + + F W+ SL P
Sbjct: 86 KEMGVNPFSGCLPILIQMPFLVSIFYALRSYPYDP-AYQSFLWLSSLGEP 134
>gi|352685798|ref|YP_004897783.1| sporulation associated-membrane protein [Acidaminococcus intestini
RyC-MR95]
gi|350280453|gb|AEQ23643.1| sporulation associated-membrane protein [Acidaminococcus intestini
RyC-MR95]
Length = 203
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 23/153 (15%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII++T+++K+ +PLTK+Q+ ST AM +QP++K +Q RY ++ ++ E S+LY
Sbjct: 19 SYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKELQMRYRDDKMKLNEELSKLY 78
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP---------- 239
++ GVNPLAGCLP + +P+ IG++ + + EG F W+ S+ P
Sbjct: 79 KKEGVNPLAGCLPLVIQMPIMIGIFYGIRDFNYEG--PSSFLWMQSIGQPDPYYILPILS 136
Query: 240 ---TTIAARQS--------GSGISWLLPFVDGH 261
T I +RQS G + + +P G+
Sbjct: 137 ALTTYIQSRQSMPPSDNPTGKVMLYFMPLFIGY 169
>gi|126701305|ref|YP_001090202.1| sporulation membrane protein SpoIIIJ [Clostridium difficile 630]
gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile
QCD-66c26]
gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile
QCD-63q42]
gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC
43255]
gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile
QCD-76w55]
gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile
QCD-97b34]
gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile
QCD-37x79]
gi|260685220|ref|YP_003216505.1| sporulation membrane protein [Clostridium difficile CD196]
gi|260688879|ref|YP_003220013.1| sporulation membrane protein [Clostridium difficile R20291]
gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile
QCD-32g58]
gi|384362907|ref|YP_006200759.1| sporulation membrane protein [Clostridium difficile BI1]
gi|423082988|ref|ZP_17071570.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
002-P50-2011]
gi|423086512|ref|ZP_17074917.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
050-P50-2011]
gi|423088751|ref|ZP_17077125.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
70-100-2010]
gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile 630]
gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196]
gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile
R20291]
gi|357546716|gb|EHJ28625.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
050-P50-2011]
gi|357547067|gb|EHJ28966.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
002-P50-2011]
gi|357559157|gb|EHJ40617.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
70-100-2010]
Length = 235
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I + +LK++ + ++ YG +IIL T++VK+ PLT KQ +ST AMQ++QP+
Sbjct: 4 IGNFLGLILKVIFEFVN------HYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPR 57
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL 226
IK IQ++Y E+ E +LY +A +NPL+GCLP L P+ IGL+ L G+
Sbjct: 58 IKEIQEKYKNKPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVF 117
Query: 227 T---------EGFFWIPSLSGPTTIAARQSGS 249
GF WI SL+ P + A SG+
Sbjct: 118 ANKAAFLAADNGFLWIKSLTSPDYVLAVFSGA 149
>gi|269798910|ref|YP_003312810.1| hypothetical protein [Veillonella parvula DSM 2008]
gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM
2008]
Length = 221
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIILLT+++K PLT KQ++S AMQ LQP++K +Q +Y + ++Q E LY
Sbjct: 33 SYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAKLQAEMGALY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP---------- 239
++ GVNPLAGCLP L +P I +Y AL + + + F W+PSL P
Sbjct: 93 KEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQ-FLWLPSLGDPDPMYILPILS 151
Query: 240 ---TTIAARQSGSG 250
T + +RQ+ SG
Sbjct: 152 ALSTWVMSRQTSSG 165
>gi|429736483|ref|ZP_19270380.1| stage III sporulation protein J family protein [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429155005|gb|EKX97709.1| stage III sporulation protein J family protein [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 223
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYGF IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y N + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+AGVNPLAGCLP L +P+ +G+Y AL N FFW+P++S P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAATFFWLPNMSEP 143
>gi|338733328|ref|YP_004671801.1| inner membrane protein oxaA [Simkania negevensis Z]
gi|336482711|emb|CCB89310.1| inner membrane protein oxaA [Simkania negevensis Z]
Length = 806
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 24/197 (12%)
Query: 97 TQKNGGWFGFISEAM-EFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
TQ GWF FISE +F+ I+ H S+GF+IILLT+++++ +PL ++
Sbjct: 552 TQSFHGWFSFISEPFAKFLFLIMNFFYKITH---SWGFSIILLTIVLRIMMYPLNAWSIK 608
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S L +Q L PK+K IQ +Y + +R QLE +LY+Q NPL GCLP + +P IG++
Sbjct: 609 SNLKLQALSPKMKKIQDKYKKDPKRQQLEMMQLYKQHKANPLGGCLPLIIQMPFLIGMFD 668
Query: 216 ALSNVANEGLLTEGFF--WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL 273
L + + L F WI +L+ P + SW P P +G ++
Sbjct: 669 LLKSTFS--LRGASFIPGWIDNLTAPDVL--------FSWSYPI----PFIG----TSFH 710
Query: 274 VLPVLLVVSQYASMELM 290
+LP+LL V + +LM
Sbjct: 711 LLPILLGVVMFFQQKLM 727
>gi|338811366|ref|ZP_08623584.1| hypothetical protein ALO_04753 [Acetonema longum DSM 6540]
gi|337276656|gb|EGO65075.1| hypothetical protein ALO_04753 [Acetonema longum DSM 6540]
Length = 222
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F F+S+ M+ L + + +P SYG AIILLT+ +K+ +PLT KQV+S AM L
Sbjct: 3 FNFLSDIMKSALTFFYNLTVSAGIP-SYGLAIILLTIAIKMILYPLTVKQVKSMKAMSEL 61
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QPK+K +Q++Y N+E++ E LY++AGVNPLAGCLP L +P I ++ A+
Sbjct: 62 QPKMKELQEKYKDNKEKLGKEIGELYQKAGVNPLAGCLPLLVQMPFLIAIFFAIKEYNYV 121
Query: 224 GLLTEGFFWIPSLS 237
G F W+ +++
Sbjct: 122 G--DSSFLWLQNMA 133
>gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum
thermopropionicum SI]
gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum
thermopropionicum SI]
Length = 222
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F I M ++L L A +P SYG AIILLT+IVK+ +PL+ KQ++S LAMQ +
Sbjct: 4 FSSIVNGMTWLLNWLYQLTVAAGLP-SYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQQI 62
Query: 164 QPKIKAIQQRYAGNQ-ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
QPK+K IQ+++ +++Q LYR+ VNP AGCLP L +P+ I LY++L N
Sbjct: 63 QPKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNFPY 122
Query: 223 EGLLTEGFFWIPSLS 237
F W+P+LS
Sbjct: 123 INTAHAVFLWVPNLS 137
>gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ATCC 17745]
gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
6_1_27]
gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
3_1_44]
gi|417000073|ref|ZP_11940427.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ACS-068-V-Sch12]
gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ATCC 17745]
gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
3_1_44]
gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
6_1_27]
gi|333976319|gb|EGL77188.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ACS-068-V-Sch12]
Length = 221
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIILLT+++K PLT KQ++S AMQ LQP++K +Q +Y + ++Q E LY
Sbjct: 33 SYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAKLQAEMGALY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP---------- 239
++ GVNPLAGCLP L +P I +Y AL + + + F W+PSL P
Sbjct: 93 KEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQ-FLWLPSLGDPDPMYILPILS 151
Query: 240 ---TTIAARQSGSG 250
T + +RQ+ +G
Sbjct: 152 ALSTWVMSRQTSNG 165
>gi|429727424|ref|ZP_19262196.1| membrane protein insertase, YidC/Oxa1 family [Peptostreptococcus
anaerobius VPI 4330]
gi|429152582|gb|EKX95400.1| membrane protein insertase, YidC/Oxa1 family [Peptostreptococcus
anaerobius VPI 4330]
Length = 204
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
G I+ A+ VLK A+H SYG AIIL T++VK+ PL KQ +ST AM +
Sbjct: 2 GHIANALGLVLK-------AIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEI 54
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
PKIK IQ +Y E+ E S+LY+++ +NPL+GCLP L +P+ L+ +
Sbjct: 55 NPKIKEIQAKYKNKPEKQNEEISKLYKESDINPLSGCLPMLVQLPILFALFWVFRDPMKY 114
Query: 224 GLLTE---------GFFWIPSLSGPTTIAARQSG 248
G+ GF W+ SL+ P I A SG
Sbjct: 115 GVFETKQAFDAANVGFVWVKSLTKPDYILAILSG 148
>gi|399889384|ref|ZP_10775261.1| inner membrane protein translocase component YidC [Clostridium
arbusti SL206]
Length = 263
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+G +II+LT+I++V PL KQ++S+L M L P+IK +Q RY + +++Q ET +LY
Sbjct: 32 SFGLSIIVLTIIIRVILLPLNIKQIKSSLMMSKLGPEIKKLQARYKSDPQKLQQETMKLY 91
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NPL GCLP + P+ I LY + +G+ GF WI LS +++
Sbjct: 92 KEKGANPLGGCLPLIIQYPILIALYYVFYTLEIKGI---GFLWIHDLSKSASLS-----D 143
Query: 250 GISWLLPFVDG 260
SW+LP + G
Sbjct: 144 WTSWILPVISG 154
>gi|289422592|ref|ZP_06424435.1| 60 kDa inner membrane insertion protein [Peptostreptococcus
anaerobius 653-L]
gi|289157164|gb|EFD05786.1| 60 kDa inner membrane insertion protein [Peptostreptococcus
anaerobius 653-L]
Length = 230
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
G I+ A+ VLK A+H SYG AIIL T++VK+ PL KQ +ST AM +
Sbjct: 2 GHIANALGLVLK-------AIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEI 54
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
PKIK IQ +Y E+ E S+LY+++ +NPL+GCLP L +P+ L+ +
Sbjct: 55 NPKIKEIQAKYKNKPEKQNEEISKLYKESDINPLSGCLPMLVQLPILFALFWVFRDPMKY 114
Query: 224 GLLTE---------GFFWIPSLSGPTTIAARQSG 248
G+ GF W+ SL+ P I A SG
Sbjct: 115 GVFETKQAFDAANVGFVWVKSLTKPDYILAILSG 148
>gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens
MI-1]
gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I + M ++ L + P SY AIILLT+ +KV +PL+KKQ+ S + MQ
Sbjct: 3 GWFDAIVDGMTALMNWLYGFTVSFGFP-SYALAIILLTIFIKVVLYPLSKKQMHSMVMMQ 61
Query: 162 NLQPKIKAIQQRYAGNQ-ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
L P+IKAIQ +Y + +Q + LY++ VNP+AGCLP L +P+ I LY+AL
Sbjct: 62 KLAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAF 121
Query: 221 ANEGLLTEGFFWIPSLS 237
+ FFW+ SLS
Sbjct: 122 PFKNPDHAHFFWVESLS 138
>gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 268
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 69/93 (74%)
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+ +SYG +II+LTV+V++ PL+ KQ+ S MQ +QP+IK IQ++YA ++E++ E
Sbjct: 22 ITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRIKVIQEKYANDKEKMNQEIM 81
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
+LYR+ GVNP AGCLP L +P++I LY+AL N
Sbjct: 82 QLYRENGVNPAAGCLPLLVQLPIFILLYRALIN 114
>gi|41469652|gb|AAS07375.1| putative inner membrane protein (with alternative splicing) [Oryza
sativa Japonica Group]
Length = 185
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 34 RRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSA 93
RR+A RV L + + + ++ +F R E+ LYT+ADAAVS AS
Sbjct: 35 RRVAPRRVVL--RPVAALGGGGGFAEVGELFGRVEAFLYTVADAAVS---ASPEVVQGGG 89
Query: 94 DGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQ 153
G + G W I+ +ME VLK+LKDG+ A+HVPY YGFAIILLTV+VK ATFPLTKKQ
Sbjct: 90 GGTKEAAGDWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLTKKQ 149
>gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
str. F0412]
gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
str. F0412]
Length = 222
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 14/134 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIILLT+ +K PLT KQ++S AMQ LQP+++ +Q +Y + R+Q E LY
Sbjct: 33 SYGVAIILLTIFIKAILAPLTVKQIKSMKAMQELQPRMQELQNKYKNDPARLQAEMGALY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP---------- 239
++ GVNPLAGCLP L +P I ++ AL + + F W+PSL P
Sbjct: 93 KEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQ-FLWLPSLGEPDPMYILPVLS 151
Query: 240 ---TTIAARQSGSG 250
T I ++Q+GSG
Sbjct: 152 AASTWIMSKQTGSG 165
>gi|310644873|ref|YP_003949632.1| insertase [Paenibacillus polymyxa SC2]
gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus
polymyxa SC2]
gi|392305513|emb|CCI71876.1| Inner membrane protein OxaA [Paenibacillus polymyxa M1]
Length = 288
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 83 SASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYS--YGFAIILLTV 140
S AA S A NG W+ +V+ +D +S YG A+++L +
Sbjct: 25 SGCTQAAHNSYTTADLANGSWWQ------RYVVYWFSYALDTFAQWFSGEYGLAVLILVI 78
Query: 141 IVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGC 200
IV+ PLT KQV S+ AMQ +QP++K IQ +Y ER+Q ET +L+++ VNP+AGC
Sbjct: 79 IVRTIILPLTLKQVRSSRAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQENKVNPMAGC 138
Query: 201 LPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
LP L +P++I LY A+ N L F W+
Sbjct: 139 LPLLVQMPIFIALYNAI--YYNSALRDHDFLWL 169
>gi|307243391|ref|ZP_07525548.1| stage III sporulation protein J family protein [Peptostreptococcus
stomatis DSM 17678]
gi|306493201|gb|EFM65197.1| stage III sporulation protein J family protein [Peptostreptococcus
stomatis DSM 17678]
Length = 233
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG +II+ T+IVK+ PLT KQ +ST AM + PK+K IQ +Y E+ E S+LY
Sbjct: 21 NYGLSIIVFTIIVKMILMPLTVKQTKSTFAMSEINPKVKEIQAKYKNKPEKQNEEISKLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTE---------GFFWIPSLSGPT 240
+++G+NPL+GCLP L +P+ +GL+ + G+ F WI +LS P
Sbjct: 81 KESGINPLSGCLPILIQMPILMGLFYVFKDPVTHGVFASKAAMAAANGNFLWIKALSKPD 140
Query: 241 TIAARQSG 248
I A SG
Sbjct: 141 YILAVFSG 148
>gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
Length = 222
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 14/136 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIILLT+++K PLT KQ++S AMQ LQP++K +Q +Y + ++Q E LY
Sbjct: 33 SYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKELQDKYKNDPAKLQAEMGALY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP---------- 239
++ GVNPLAGCLP L +P I ++ AL + + F W+PSL P
Sbjct: 93 KEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQ-FLWLPSLGEPDPMYILPVLS 151
Query: 240 ---TTIAARQSGSGIS 252
T I ++Q+ SG S
Sbjct: 152 AASTWIMSKQTSSGAS 167
>gi|338175243|ref|YP_004652053.1| inner membrane protein oxaA [Parachlamydia acanthamoebae UV-7]
gi|336479601|emb|CCB86199.1| inner membrane protein oxaA [Parachlamydia acanthamoebae UV-7]
Length = 840
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A Q GWF FISE L IL +V S+ F+IILLTV ++V +PL +
Sbjct: 584 ACQSFHGWFSFISEPFAKFLFILMQFFHSVTG--SWAFSIILLTVALRVMLYPLNAWSTK 641
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S L MQ + P++KAIQ+R+ + ++ QLE LY++ GVNP++GCLP L +P IG++
Sbjct: 642 SMLRMQQIAPEVKAIQERHKKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLIGMFD 701
Query: 216 ALSNVANEGLLTEGFF--WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL 273
L + L F WI +L+ P + + Q+ LPF+ +
Sbjct: 702 LLKSTFE--LRGASFIPGWIDNLTAPDVLFSWQTP------LPFIGNQ----------FH 743
Query: 274 VLPVLLVVSQYASMELM 290
+LP+LL V + M
Sbjct: 744 LLPILLGVVMWLQQRFM 760
>gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 840
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A Q GWF FISE L IL +V S+ F+IILLTV ++V +PL +
Sbjct: 584 ACQSFHGWFSFISEPFAKFLFILMQFFHSVTG--SWAFSIILLTVALRVMLYPLNAWSTK 641
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S L MQ + P++KAIQ+R+ + ++ QLE LY++ GVNP++GCLP L +P IG++
Sbjct: 642 SMLRMQQIAPEVKAIQERHKKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLIGMFD 701
Query: 216 ALSNVANEGLLTEGFF--WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL 273
L + L F WI +L+ P + + Q+ LPF+ +
Sbjct: 702 LLKSTFE--LRGASFIPGWIDNLTAPDVLFSWQTP------LPFIGNQ----------FH 743
Query: 274 VLPVLLVVSQYASMELM 290
+LP+LL V + M
Sbjct: 744 LLPILLGVVMWLQQRFM 760
>gi|384110039|ref|ZP_10010882.1| membrane protein insertase, YidC/Oxa1 family [Treponema sp. JC4]
gi|383868405|gb|EID84061.1| membrane protein insertase, YidC/Oxa1 family [Treponema sp. JC4]
Length = 588
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 28/188 (14%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
++ GW ++ ++FV+++L V ++G II+LT+I+K+ FPL+K Q TL
Sbjct: 340 QSSGWLNWLEAILKFVMELL------YKVIPNWGVTIIVLTIILKILLFPLSKNQSMGTL 393
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
MQ +QP+++AIQ++Y +Q R+Q+E +LY++AG NP++GCLP L + +Y +
Sbjct: 394 KMQAIQPRMQAIQEKYKNDQTRMQMEVQKLYKEAGYNPVSGCLPMLFQFLILFAMYNLFN 453
Query: 219 NVANEGLLTEGFF---WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL 275
N F WIP LS ++ L F P LG +L
Sbjct: 454 NYFE---FRGAMFIPNWIPDLSVGDSVKT----------LNF--NIPALG----NQIRIL 494
Query: 276 PVLLVVSQ 283
PV+ V+SQ
Sbjct: 495 PVIYVISQ 502
>gi|374583857|ref|ZP_09656951.1| preprotein translocase subunit YidC [Desulfosporosinus youngiae DSM
17734]
gi|374419939|gb|EHQ92374.1| preprotein translocase subunit YidC [Desulfosporosinus youngiae DSM
17734]
Length = 224
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I E M+ +L IL + +V +PY YG AIILLT+++K FPLT KQ+ S +LQPK
Sbjct: 4 IVEGMKNLLDILYNLSSSVGLPY-YGVAIILLTMLIKTLIFPLTYKQMASMRKTVDLQPK 62
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
IKA+Q++Y N+E+ LY++ VNPL GCLP L +P++ LY AL N
Sbjct: 63 IKALQEKYKNNKEKANAAVMELYKEHNVNPLGGCLPILVQLPIFWALYSALLN 115
>gi|210624040|ref|ZP_03294157.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275]
gi|210153247|gb|EEA84253.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275]
Length = 235
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIIL T +VK+ PLT KQ +ST+AMQ + P++ IQ++Y N ER E LY
Sbjct: 22 SYGVAIILFTFLVKLLLMPLTIKQTKSTVAMQEITPRVNEIQEKYKNNPERQNKEIMELY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN------VANEGLLTEG---FFWIPSLSGPT 240
++A +NP+AGCLP L P+ IGL+ L + A++ + F W+ +L+ P
Sbjct: 82 QRANINPMAGCLPLLIQFPILIGLFNLLKDPVGLGAFASQAAFNQANGQFLWMQNLTNPD 141
Query: 241 TIAARQSGS 249
TI A SG+
Sbjct: 142 TILAILSGA 150
>gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter
fumaroxidans MPOB]
gi|166977422|sp|A0LLH3.1|YIDC_SYNFM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans
MPOB]
Length = 553
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 16/170 (9%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A+ + GWF FI++ + +VL +++G AIILLT+++K+ +PLT+K +
Sbjct: 332 ASAVDYGWFTFIAKPLVYVLDWF------YRYTHNWGVAIILLTIVIKILFWPLTQKSYQ 385
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S M+ +QPK+ I+++Y G++E++ E LYR VNP+ GCLP L IPV+ LY+
Sbjct: 386 SMQKMKKIQPKMTQIREKYKGDREKMNQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYR 445
Query: 216 ALSNVANEGLLTEGF-FWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPL 264
L+ L E F WI L+ P + I + +P++ G P L
Sbjct: 446 MLNGAVE--LRHEPFMLWIDDLTAPDRLP-------IGFDIPYLGGLPVL 486
>gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form
[Sphingomonas sp. S17]
gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form
[Sphingomonas sp. S17]
Length = 565
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIILLTV ++ FP+ ++Q S AM+ +QPK+KA+Q+RY ++ R+Q E LY
Sbjct: 356 NFGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKVRMQQEVMALY 415
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
+Q VNPLAGCLPTL IP++ LY+ L + E WI LS P + +
Sbjct: 416 KQEKVNPLAGCLPTLIQIPIFYALYKVLM-LTIEMRHQPFVAWIKDLSAPDPL----TPV 470
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ LLPF H A V+P+LL +S Y ++ P
Sbjct: 471 NLFGLLPFTPPH-------FIAIGVVPILLGISMYFQFKMNPQP 507
>gi|452992120|emb|CCQ96436.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
family) [Clostridium ultunense Esp]
Length = 230
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
+NG W F + ++L L + SYG AI+++T++V+ A PLT KQ +S+L
Sbjct: 11 RNGFWDAFFVYPLYWLLDFLAQNMWG-----SYGLAIVIMTLMVRFAILPLTVKQYKSSL 65
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
MQ +QP++ I+++Y N +++Q E +LY++ GVNP+AGCLP L P+ I Y A+S
Sbjct: 66 EMQKIQPEMMKIREKYKDNAQKMQEEMMKLYQKHGVNPMAGCLPLLIQAPILIAFYNAIS 125
Query: 219 NVANEGLLTEGFFWI 233
+E + F W+
Sbjct: 126 R--SEHIRESSFLWL 138
>gi|410666405|ref|YP_006918776.1| membrane protein OxaA [Thermacetogenium phaeum DSM 12270]
gi|409104152|gb|AFV10277.1| membrane protein OxaA [Thermacetogenium phaeum DSM 12270]
Length = 229
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIIL T+ VK+ FPLT+ Q+ S AMQ LQPKIK IQ+RY E+ Q +LY
Sbjct: 27 SYGLAIILFTIAVKIVLFPLTRLQMNSMRAMQELQPKIKEIQERYKNKPEKAQQAVMQLY 86
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL------LTE-GFFWIPSLSGPTTI 242
++ GVNP++GCLP L +P+ L+ +L + L LT+ GF WI +L P I
Sbjct: 87 KEKGVNPMSGCLPLLIQMPIIFALFSSLRLFFDPKLHPPYVDLTKAGFLWIENLGQPDPI 146
>gi|375311483|ref|ZP_09776738.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus sp.
Aloe-11]
gi|375076663|gb|EHS54916.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus sp.
Aloe-11]
Length = 288
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 83 SASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYS--YGFAIILLTV 140
S A S A NG W+ +V+ +D +S YG A+++L +
Sbjct: 25 SGCAPTAHNSYTTADLANGSWW------QRYVVYWFSYALDTFAQWFSGEYGLAVLILVI 78
Query: 141 IVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGC 200
IV+ PLT KQV S+ AMQ +QP++K IQ +Y ER+Q ET +L+++ VNP+AGC
Sbjct: 79 IVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQENKVNPMAGC 138
Query: 201 LPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
LP L +P++I LY A+ N L F W+
Sbjct: 139 LPLLVQMPIFIALYNAI--YYNSALRDHDFLWL 169
>gi|297570495|ref|YP_003691839.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio
alkaliphilus AHT2]
gi|296926410|gb|ADH87220.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio
alkaliphilus AHT2]
Length = 560
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 94 DGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQ 153
D A N GWF F++ ++L L + +YG AIIL+T+I+K A +PLT+K
Sbjct: 337 DLARAVNFGWFDFLARPTFYLLHFLYGLVG------NYGVAIILVTIIIKAAFWPLTQKG 390
Query: 154 VESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGL 213
++S MQ +QPK+ ++++Y +++R Q E +LY+ VNPL GCLP L IPV+ L
Sbjct: 391 LKSMKVMQKIQPKMTKLREKYKDDRQRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFAL 450
Query: 214 YQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
Y+ L + E WI LS P + G I WL
Sbjct: 451 YKVLLQ-SIELRHAPFMLWINDLSAPDRLYI---GFDIPWL 487
>gi|302336556|ref|YP_003801762.1| YidC/Oxa1 family membrane protein insertase [Spirochaeta
smaragdinae DSM 11293]
gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta
smaragdinae DSM 11293]
Length = 585
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 18/168 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIILLT++VKV FP+T K EST MQ LQPK+K IQ +Y N ++ E + LY
Sbjct: 376 NWGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPKMKEIQDKYRDNPNKMNQEMAELY 435
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF--WIPSLSGPTTIAARQS 247
++ VNP+ GCLP L +P++I +Y + + L F WI LS P ++ +
Sbjct: 436 KREKVNPMGGCLPMLLQMPMFIAMYGLFNKYFD--LRGSSFIPGWITDLSSPESVYS--- 490
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
PF P LGW D +LP+ V + S ++ + P +
Sbjct: 491 ------FAPF--KIPILGWSDIR---LLPMFFVATMILSSKMTQSPSS 527
>gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC
[Novosphingobium nitrogenifigens DSM 19370]
gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC
[Novosphingobium nitrogenifigens DSM 19370]
Length = 606
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L L H ++G AIILLT+IV+ FP+ ++Q S AM+
Sbjct: 352 GWFRWFEKPIFWLLDSL------FHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMR 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ+RY ++ R Q E LY++ GVNPLAGCLP IPV+ LY+ L V
Sbjct: 406 AIQPKMKAIQERYKDDKPRQQQEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVL--VL 463
Query: 222 NEGLLTEGF-FWIPSLSGP 239
+ + F WI LS P
Sbjct: 464 TIEMRHQPFALWIHDLSSP 482
>gi|403389392|ref|ZP_10931449.1| inner membrane protein translocase component YidC [Clostridium sp.
JC122]
Length = 239
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 42/190 (22%)
Query: 112 EFVLKILKDGIDAVH---------VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQN 162
EF + DA+H YSYG AII+ T++VKV PLT KQ S++ +
Sbjct: 3 EFFSVYFVNFFDAIHGMIQSVISNPNYSYGIAIIIFTIVVKVILLPLTIKQTRSSVKLAE 62
Query: 163 LQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
+QPK AIQ++Y + +R Q E +LY++ V+P++GCLP L P+ I L+ A S +
Sbjct: 63 VQPKTAAIQEKYKNDPQRAQQEILKLYKEENVSPMSGCLPLLIQYPIIIVLFYAFSTLNY 122
Query: 223 EGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVS 282
G GF WIP+L+ P Y +LPVL VS
Sbjct: 123 HG---AGFLWIPNLNQPD------------------------------PYFILPVLSGVS 149
Query: 283 QYASMELMKP 292
Y ++++P
Sbjct: 150 TYIMSKMLQP 159
>gi|335039143|ref|ZP_08532325.1| membrane protein insertase, YidC/Oxa1 family [Caldalkalibacillus
thermarum TA2.A1]
gi|334180953|gb|EGL83536.1| membrane protein insertase, YidC/Oxa1 family [Caldalkalibacillus
thermarum TA2.A1]
Length = 252
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPY--SYGFAIILLTVIVKVATFPLTKKQVEST 157
NG W F + + L ++ + P YG++I+++TV++++ T PL KQ++++
Sbjct: 31 NGIWDKFFVYPLSWALDYFAQLLNPTNNPALDRYGWSIVIVTVLIRLLTLPLMVKQLKTS 90
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
MQ LQP++ ++++Y +Q+R+Q E +L+++ VNPLAGCLP L +P+ I Y A+
Sbjct: 91 KVMQALQPEMVKLREKYQKDQQRLQQEMLKLFQKHNVNPLAGCLPVLVQMPILIAFYHAI 150
Query: 218 SNVANEGLLTEGFFWIPSLSGP 239
+ NE + + F W+P L P
Sbjct: 151 --MRNEHIASHPFLWLPDLGNP 170
>gi|374710120|ref|ZP_09714554.1| OxaA-like protein precursor [Sporolactobacillus inulinus CASD]
Length = 259
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 9/133 (6%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
GF S+ FVL + K I H+ + SYG AII+ T+IV++ PL KQV+S+ AMQ L
Sbjct: 34 GFWSQW--FVLPLSKFIISVAHLFWNSYGLAIIITTIIVRLVLLPLMAKQVKSSQAMQQL 91
Query: 164 QPKIKAIQQRYA----GNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
QPKIKA+Q++Y+ Q+++Q E +L+++ VNPLAGCLP L +P+ YQA+
Sbjct: 92 QPKIKALQEKYSSKDQNTQKKLQEEQMKLFQEHSVNPLAGCLPILIQMPILFAFYQAIMR 151
Query: 220 VANEGLLTEGFFW 232
+ + T+ F W
Sbjct: 152 TSE--IKTQSFLW 162
>gi|390454465|ref|ZP_10239993.1| membrane protein oxaA 1 [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 13/154 (8%)
Query: 85 SGGAASTSADGATQK---NGGWFGFISEAMEFVLKILKDGIDAVHVPYS--YGFAIILLT 139
SG A +T+ + T NG W+ +V+ +D +S YG A+++L
Sbjct: 25 SGCAPTTAHNSYTTADLANGSWW------QRYVVYWFSYALDTFAQWFSGEYGLAVLILV 78
Query: 140 VIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAG 199
+IV+ PLT KQV S+ AMQ +QP++K IQ +Y ER+Q ET +L+++ VNP+AG
Sbjct: 79 IIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQENKVNPMAG 138
Query: 200 CLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
CLP + +P++I LY A+ N L F W+
Sbjct: 139 CLPLVVQMPIFIALYNAI--YYNSALRDHDFLWL 170
>gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
owensensis OL]
gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
owensensis OL]
Length = 341
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N WF F++ + +LK++ D + H+P SYG A+ILLT+IV+ PL KQ+ S
Sbjct: 2 NPTWFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q+++Q E +LY++ G NP AGC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQN 121
>gi|402835644|ref|ZP_10884207.1| 60Kd inner membrane protein [Mogibacterium sp. CM50]
gi|402273926|gb|EJU23116.1| 60Kd inner membrane protein [Mogibacterium sp. CM50]
Length = 249
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 77/117 (65%), Gaps = 7/117 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG ++I+LTV+VK+ +PL KQ++ST +M LQPK+KA+Q++Y ++E++ E ++LY
Sbjct: 21 NYGISLIILTVLVKLILYPLYFKQIKSTASMSTLQPKMKALQEKYKNDKEKLNEEMTKLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN----VANEGLL---TEGFFWIPSLSGP 239
R+ NP+ GCLP L P+ +GL+ L N +A++ +L + F WI L P
Sbjct: 81 REEKFNPMGGCLPMLIQFPIIMGLFTLLRNPMKYIADDKMLFAVHQSFLWIKDLGQP 137
>gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
phagedenis F0421]
gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
phagedenis F0421]
Length = 609
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 21/171 (12%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+++K+ +PLTKK ++ MQ LQP+++ IQ +Y N +++ E ++ Y
Sbjct: 388 NWGVAIILVTLLIKLLFYPLTKKSFVASQRMQELQPQMQTIQAKYKNNPQKLNEEMAKFY 447
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLSGPTTIAARQ 246
++AG NPL+GCL L +P +Y+ +N F WIP LS +I
Sbjct: 448 KEAGYNPLSGCLTLLVQMPFLFAMYRLFNNYFE---FRGAMFIPHWIPDLSIGDSI---- 500
Query: 247 SGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQARK 297
W LPF P GW D +LP+L VVSQ ++ +PP +
Sbjct: 501 ------WKLPFT--VPFFGWTDLR---LLPILYVVSQIVFSKITQPPATEQ 540
>gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 296
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
YGFA+IL T+IVK PL KQ S MQ +QP++ +Q++Y N E++ ET +LY
Sbjct: 21 DYGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNNLQKKYKNNPEKLNAETMKLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVA-------NEGLLTEGFFWIPSLSGP 239
+ VNP+AGCLP L +P+ GL+ AL + A N L GF+WIP+L P
Sbjct: 81 KLYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNGNLSALRAGFYWIPNLGKP 137
>gi|392375991|ref|YP_003207824.1| Inner membrane protein oxaA [Candidatus Methylomirabilis oxyfera]
gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [Candidatus Methylomirabilis
oxyfera]
Length = 557
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF ++ +L+ L + +YG AIIL++V+ K+ PLT K + S AM+
Sbjct: 330 GWFDALARPALHLLRFLN------RISGNYGVAIILVSVLQKIVLHPLTAKSLRSMQAMK 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI AI +R N ++ Q E LY++ GVNPL GCLP L +P+++ LY ALS+
Sbjct: 384 ALQPKIAAISERNKNNPQKKQQEVMGLYKKHGVNPLGGCLPMLIQLPIFVALYNALSSSV 443
Query: 222 NEGLLTEGFFWIPSLSGPTTIAA 244
+ F WI LS P + A
Sbjct: 444 E--MWRAPFLWIKDLSQPDALFA 464
>gi|374321353|ref|YP_005074482.1| membrane protein oxaA 1 [Paenibacillus terrae HPL-003]
gi|357200362|gb|AET58259.1| membrane protein oxaA 1 precursor [Paenibacillus terrae HPL-003]
Length = 290
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 83 SASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYS--YGFAIILLTV 140
S A S A NG W+ +V+ +D +S YG A+++L +
Sbjct: 25 SGCTQTAHNSYTTADLANGSWW------QRYVVYWFSYALDTFAQWFSGEYGLAVLILVI 78
Query: 141 IVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGC 200
IV+ PLT KQV S+ AMQ +QP++K IQ +Y E++Q ET RL+++ VNP+AGC
Sbjct: 79 IVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPEKVQQETMRLFQENKVNPMAGC 138
Query: 201 LPTLATIPVWIGLYQALSNVANEGLLTEGFFW-----------IPSLSGPTTIAARQSGS 249
LP + +P++I LY A+ N L F W +P L+ TT
Sbjct: 139 LPLIVQMPIFIALYNAI--YYNSALRDHDFLWLQLGKPDHFFILPILAAITTFVQ----- 191
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQY 284
+W++ ++ P G Y V PVL++ Y
Sbjct: 192 --TWMMMKMNPTPQQGPMQFLLY-VYPVLILFMSY 223
>gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 349
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 73/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK++ D + ++P SYG AIILLT+IV+ PL KQ+ ST
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+I+ IQQ+Y G+Q ++Q E +LY++ G NP +GC P L IP+ LY N
Sbjct: 62 MAEVAPRIQEIQQKYKGDQRKMQEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQN 121
>gi|291285982|ref|YP_003502798.1| YidC/Oxa1 family membrane protein insertase [Denitrovibrio
acetiphilus DSM 12809]
gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio
acetiphilus DSM 12809]
Length = 509
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G F FI+ M LK LK VH +YG AIILLT+++K+ TFPLT+K + S M
Sbjct: 304 GIFSFIAIPM---LKFLKIIYSYVH---NYGVAIILLTLVIKILTFPLTQKSMVSMKKMS 357
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+LQPK+ I++++ G++E+ T LY+ GVNPL GCLP + IP++ LY+ L
Sbjct: 358 SLQPKMLEIKEKFKGDKEKTNAATMELYKNEGVNPLGGCLPMVLQIPIFFALYKTL 413
>gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 223
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 109 EAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIK 168
+A+ ++L L ++ +P SY AII+LT+++K+ +PL Q++S MQ LQPK++
Sbjct: 6 DAITWILNNLYLFTKSIGIP-SYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQ 64
Query: 169 AIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTE 228
IQ++Y + ++ Q LY++ GVNP++GCLP L +P+ I LY+AL N
Sbjct: 65 EIQKKYKNDPQKQQQALMELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHA 124
Query: 229 GFFWIPSLS 237
FFWI ++S
Sbjct: 125 KFFWIANIS 133
>gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 341
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK + D + H+P SYG AIILLT+IV+ PL KQ++ST
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q+++Q E +LY++ G NP GC P L IP+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQN 121
>gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
gi|422344240|ref|ZP_16425166.1| hypothetical protein HMPREF9432_01226 [Selenomonas noxia F0398]
gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
gi|355377559|gb|EHG24776.1| hypothetical protein HMPREF9432_01226 [Selenomonas noxia F0398]
Length = 224
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 78/110 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG+ IILLT+++K+ T+PLT KQV+S AMQ +QPK+K IQ++Y N + +Q +T L+
Sbjct: 34 SYGYPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R AGVNPLAGCLP L +P+ +G+Y AL N FFW+P++S P
Sbjct: 94 RNAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAAAAAFFWLPNMSEP 143
>gi|383789149|ref|YP_005473718.1| inner membrane protein OxaA [Caldisericum exile AZM16c01]
gi|381364786|dbj|BAL81615.1| inner membrane protein OxaA [Caldisericum exile AZM16c01]
Length = 378
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 25/217 (11%)
Query: 32 PNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAA-------VSLDSA 84
P STRV L ++I +D+ D F T YT +A V+ A
Sbjct: 80 PFELWKSTRVVL-LKDISKTSVIDAGKDATFTFYITS---YTEIEAKPYPIKFEVTYKDA 135
Query: 85 SGGAASTSADGATQ--KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIV 142
+G + + G++ F+ +E++ K+ K+ YG AII+LT+++
Sbjct: 136 NGKVITIDKEAILNITPTSGFYKFMRLIIEWINKVTKN----------YGLAIIVLTILI 185
Query: 143 KVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLP 202
K+AT PLT+ Q +ST +Q +QP++K IQ++Y N ++ Q E +LY++ GVN GCLP
Sbjct: 186 KLATHPLTRYQFKSTAKLQEIQPELKKIQEKYKDNPQKQQQEIVKLYKEKGVNMYGGCLP 245
Query: 203 TLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
L P+ I LY AL N A F W+ +L+ P
Sbjct: 246 VLIQWPLLIVLYGALMNYA--PFNNVRFLWLSNLNIP 280
>gi|325294818|ref|YP_004281332.1| membrane protein OxaA [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065266|gb|ADY73273.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 490
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 102 GWFGFISE-AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
G FGF+++ ++F L + + +P ++G II+LT+++K+ PLT K ES M
Sbjct: 284 GIFGFLAKPFLKFFLFLHQ------FIP-NWGLVIIVLTILIKIILHPLTHKSFESMKKM 336
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q L PK++ I+ +Y N +++ E +LY++AGVNP+ GCLP L IP++ LY+ N
Sbjct: 337 QELAPKLEEIKNKYKDNPQKLNEEMMKLYKEAGVNPMGGCLPILLQIPIFFALYEIFLNA 396
Query: 221 ANEGLLTEGFFWIPSLSGPTT 241
L F W+P LS P +
Sbjct: 397 VE--LKGASFLWVPDLSMPDS 415
>gi|406897224|gb|EKD41239.1| Membrane protein oxaA [uncultured bacterium]
Length = 544
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWFG I+ + ++L L+ V ++G AII LT IVK+ P+ KK +ES AMQ
Sbjct: 326 GWFGLIAVPLLWLLVSLE------KVLGNWGLAIIALTFIVKMILHPVNKKSMESMKAMQ 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
LQP++K IQQ+Y G++E++ +E +++ VNP+ GCLP + +P++I LY+ L N
Sbjct: 380 KLQPRMKEIQQKYKGDREKLNMEMMTMFKSHKVNPMGGCLPMILQMPIYIALYKVLWN 437
>gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
kronotskyensis 2002]
gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
kronotskyensis 2002]
Length = 341
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK + D + H+P SYG AIILLT+IV+ PL KQ++ST
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q+++Q E +LY++ G NP GC P L IP+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQN 121
>gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 575
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ ++LK++ G+ + G AI+ LTV++K FPL K S M+
Sbjct: 345 GWFYFLTKPFFYLLKMMNSGLG------NMGLAILALTVLIKGIMFPLANKSYASMSKMK 398
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP++KA+Q+R+ ++ R+Q E LY++ VNP++GCLP L IPV+ LY+ L VA
Sbjct: 399 LLQPQVKALQERFGDDKVRLQQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLF-VA 457
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E + WI LS PTTI
Sbjct: 458 IEMRHAPFYGWIKDLSAQDPTTI 480
>gi|397690139|ref|YP_006527393.1| preprotein translocase subunit YidC [Melioribacter roseus P3M]
gi|395811631|gb|AFN74380.1| Preprotein translocase subunit YidC [Melioribacter roseus P3M]
Length = 647
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YGF IILL++IVK A PLTK+ ++S MQ LQPKI ++++Y + +R+Q ET +LY
Sbjct: 388 NYGFVIILLSIIVKFALHPLTKQSMKSMKKMQLLQPKINELKEKYKDDPQRVQKETMKLY 447
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
G+NP+ GC P L +P+ I L+ +L NVA + WI +LS P I
Sbjct: 448 STYGINPMGGCFPMLLQMPILIALW-SLFNVAIDIRQQPFILWIDNLSAPDVI 499
>gi|344924338|ref|ZP_08777799.1| preprotein translocase subunit YidC [Candidatus Odyssella
thessalonicensis L13]
Length = 560
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 14/195 (7%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + +VL+ L + + G AI+LLTVI KVA FPL K S M+
Sbjct: 330 GWFYFLTKPLFYVLEYLNKILGNI------GLAILLLTVIFKVAMFPLANKSYRSMSRMK 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ ++QRY ++ ++ E LY++ +NP+AGCLP L PV+ LY+ L V
Sbjct: 384 ALQPKMEVLKQRYGADKMKLNQELMELYKKEKINPMAGCLPILIQAPVFFCLYKVLF-VT 442
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E + WI LS P S + LLPF PP A L++ V +++
Sbjct: 443 LEMRHAPFYGWIHDLSAPDPT----SVFNLFGLLPFT---PPSFLMIGAWPLIMGVTMLL 495
Query: 282 SQYASMELMKPPQAR 296
Q S + P QA+
Sbjct: 496 QQRLSPQPADPAQAK 510
>gi|334142729|ref|YP_004535937.1| preprotein translocase subunit YidC [Novosphingobium sp. PP1Y]
gi|333940761|emb|CCA94119.1| preprotein translocase subunit YidC [Novosphingobium sp. PP1Y]
Length = 586
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L + + ++G AIILLT+IV+ FP+ ++Q S AM+
Sbjct: 345 GWFRWFEKPIFWLL------VKLFSLVGNFGVAIILLTLIVRGIMFPIAQRQFASMAAMR 398
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KA+Q+RY ++++ Q E +LY++ GVNPLAGCLP IPV+ LY+ L +A
Sbjct: 399 AIQPKMKALQERYKDDKQKQQQEVMKLYKEEGVNPLAGCLPMFLQIPVFFALYKTLI-LA 457
Query: 222 NEGLLTEGFFWIPSLSGP 239
E WI LS P
Sbjct: 458 IEMRHQPFVLWIKDLSAP 475
>gi|359398647|ref|ZP_09191663.1| preprotein translocase subunit YidC [Novosphingobium
pentaromativorans US6-1]
gi|357599885|gb|EHJ61588.1| preprotein translocase subunit YidC [Novosphingobium
pentaromativorans US6-1]
Length = 586
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L + + ++G AIILLT+IV+ FP+ ++Q S AM+
Sbjct: 345 GWFRWFEKPIFWLL------VKLFSLVGNFGVAIILLTLIVRGIMFPIAQRQFASMAAMR 398
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KA+Q+RY ++++ Q E +LY++ GVNPLAGCLP IPV+ LY+ L +A
Sbjct: 399 AIQPKMKALQERYKDDKQKQQQEVMKLYKEEGVNPLAGCLPMFLQIPVFFALYKTLI-LA 457
Query: 222 NEGLLTEGFFWIPSLSGP 239
E WI LS P
Sbjct: 458 IEMRHQPFVLWIKDLSAP 475
>gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus
metalliredigens QYMF]
gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus
metalliredigens QYMF]
Length = 217
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 21/160 (13%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQ 164
F+++ + +LKI+ D I +YG AII+ TV+VK+A PLT KQ +S MQ +Q
Sbjct: 2 NFLTQPLGALLKIIFDVIG------NYGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEIQ 55
Query: 165 PKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG 224
P IK +Q+++ ++E++ ++ LY++ V+P GCLP L P+ IGL+ L + G
Sbjct: 56 PMIKELQEQHKDDKEQMNIKVMELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDYG 115
Query: 225 LLTE----GFFWIPSLSGPTTIAARQSGSGISWLLPFVDG 260
E GF WIP+L+ W+LP + G
Sbjct: 116 FTLEVIQAGFLWIPNLA-----------EADPWILPLLAG 144
>gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Starkeya novella DSM 506]
gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Starkeya novella DSM 506]
Length = 609
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 22/197 (11%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ + V+ + G+ ++G AI+++TV++K+ FPL K S M+
Sbjct: 358 GWFYFITKPLFLVIDWIYKGVG------NFGVAILIVTVMLKIVFFPLANKSYASMAKMK 411
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+I A+++RY ++ ++Q E +Y++ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 412 AVQPEITALRERYGDDRVKLQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLF-VT 470
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E F WI LS PTTI + L+P+ G P+ H +L+L P
Sbjct: 471 IEMRHAPFFGWIKDLSAPDPTTI------FNLFGLIPWDPGQVPVIGH----FLLLGVWP 520
Query: 277 VLLVVSQYASMELMKPP 293
+++ ++ +A M+L P
Sbjct: 521 IIMGITMWAQMKLNPAP 537
>gi|407796867|ref|ZP_11143818.1| OxaA-like protein precursor [Salimicrobium sp. MJ3]
gi|407018765|gb|EKE31486.1| OxaA-like protein precursor [Salimicrobium sp. MJ3]
Length = 255
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 11/151 (7%)
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVAT 146
G A + D + G W F+ + L D + SYG AII +T+I+++
Sbjct: 20 GCAQINQDVSADSTGFWNEFVVWPLSQTLLFFADFLSG-----SYGLAIITVTIIIRLVL 74
Query: 147 FPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLETSRLYRQAGVNPLAGCLP 202
PL KQ++S+ +MQ++QP+++ ++Q+Y A Q+++Q ET L++Q GVNPLAGCLP
Sbjct: 75 LPLNVKQLKSSKSMQDIQPQLQELRQKYSSKDAQTQQKLQQETMNLFQQNGVNPLAGCLP 134
Query: 203 TLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+ +P+ IG Y A+ + T F W+
Sbjct: 135 IIVQMPILIGFYHAIMRTPE--IQTHNFMWL 163
>gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
hydrothermalis 108]
gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
hydrothermalis 108]
Length = 341
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 73/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK++ D + H+P SYG A+ILLT+IV+ PL KQ++ST
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q+++Q E +LY++ G NP GC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQN 121
>gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
ATCC 35110]
gi|254772769|sp|B3QYV6.1|YIDC_CHLT3 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
ATCC 35110]
Length = 586
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 126 HVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLET 185
HV SYG IIL + +K+ T+PLT +S M LQP++KAIQ++Y N E++Q E
Sbjct: 366 HVD-SYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQYKDNPEKLQAEI 424
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAAR 245
S +YR+AGVNPL GCLPT+ +P+ ++ + L EGF W LS P +I
Sbjct: 425 SGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQEGFLWSNDLSVPDSILD- 481
Query: 246 QSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMEL 289
LPF P G H + V+P+L+ V+ + +L
Sbjct: 482 ---------LPF--SIPLYGDHVS----VIPILMGVAVFFQQKL 510
>gi|297622618|ref|YP_003704052.1| YidC/Oxa1 family membrane protein insertase [Truepera radiovictrix
DSM 17093]
gi|297163798|gb|ADI13509.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix
DSM 17093]
Length = 562
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+G AIILLT++ + +PL Q +S + MQ +QPK++ +Q++Y ++E++ ET +LY
Sbjct: 328 SWGLAIILLTLLFRALVWPLISAQTKSMVGMQKIQPKMQELQKKYKNDREKLTQETMKLY 387
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL 236
++AGVNP GCLP L +P++I L++ N EGF WIP L
Sbjct: 388 QEAGVNPAGGCLPILVQMPIFIILWRVFINFE----FNEGFLWIPDL 430
>gi|365873923|ref|ZP_09413456.1| membrane protein insertase, YidC/Oxa1 family [Thermanaerovibrio
velox DSM 12556]
gi|363984010|gb|EHM10217.1| membrane protein insertase, YidC/Oxa1 family [Thermanaerovibrio
velox DSM 12556]
Length = 267
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 66/90 (73%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG +IILLTV+V++ PL+ KQ+ S MQ +QP++K IQ++YA ++E++ E +LY
Sbjct: 25 SYGLSIILLTVVVRILLHPLSHKQMVSMQRMQKIQPRLKVIQEKYANDKEKMNQEMMQLY 84
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
++ GVNP AGCLP L +P++I LY+ L N
Sbjct: 85 KEHGVNPAAGCLPLLVQLPIFILLYRVLMN 114
>gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 300
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AI+LLT+++K+ PLT+ Q+ S M LQP+IKAIQ RY +++++Q + LY
Sbjct: 27 SYGIAIVLLTILIKIFLHPLTRIQMRSMAKMSQLQPEIKAIQDRYGKDKQQMQTKIMELY 86
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+AGCL L +P I LYQAL N GF W+ L
Sbjct: 87 KERKVNPMAGCLLLLVQLPFMIALYQALWNFDYVNPAHAGFLWVADLK 134
>gi|393198834|ref|YP_006460676.1| preprotein translocase subunit YidC [Solibacillus silvestris
StLB046]
gi|406667892|ref|ZP_11075643.1| Stage III sporulation protein J [Bacillus isronensis B3W22]
gi|327438165|dbj|BAK14530.1| preprotein translocase subunit YidC [Solibacillus silvestris
StLB046]
gi|405384299|gb|EKB43747.1| Stage III sporulation protein J [Bacillus isronensis B3W22]
Length = 260
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+++ NG W +I + +K+ D + +Y FAII++TVI+++ PLT KQV+
Sbjct: 29 SSESNGFWNEYIVWPLVSFIKLFADMFEGNAA--NYAFAIIIVTVIIRLIILPLTIKQVK 86
Query: 156 STLAMQNLQPKIKAIQQRY----AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
S+ MQ +QPK+K +Q +Y A Q++ Q E +L + +GVNPLAGCLP L +P+ I
Sbjct: 87 SSKKMQEMQPKLKELQAKYSSKDAATQQKYQQEMMQLMQTSGVNPLAGCLPILIQMPILI 146
Query: 212 GLYQALSNV-ANEGLLTEGFFWIPSLSGPTTIAARQSG 248
G Y A+S + A G F L+ P+ + A +G
Sbjct: 147 GFYHAISRMNATPDAFELGTFLAVPLAEPSIVFAVIAG 184
>gi|451980392|ref|ZP_21928787.1| putative Inner membrane protein oxaA [Nitrospina gracilis 3/211]
gi|451762432|emb|CCQ90018.1| putative Inner membrane protein oxaA [Nitrospina gracilis 3/211]
Length = 559
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 102 GWFGF-ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWFG + ++ +LK L D + +YG+AIILLT ++K+ FPLT K +S M
Sbjct: 350 GWFGNKFAFLVKPILKCLNYFYDLIG---NYGWAIILLTFVIKLIFFPLTHKSFKSMKGM 406
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
Q +QP +K +Q+RY +++++ E LYR+ VNPL GCLP L IPV+I LY AL
Sbjct: 407 QKIQPYVKVLQERYKDDRQKMNEEMIGLYRKHKVNPLGGCLPMLLQIPVFIALYHAL 463
>gi|357975435|ref|ZP_09139406.1| membrane protein insertase [Sphingomonas sp. KC8]
Length = 568
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 28/233 (12%)
Query: 65 SRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDA 124
+R+ S + A LD+ + D A + GWF + + + +VL L
Sbjct: 301 TRSTSHFFAGAKEVTVLDAYKKHQGFVNFDRAI--DWGWFIWFEKPIFYVLDWLFKQFG- 357
Query: 125 VHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLE 184
++G AIILLT IV+ FP+ +KQ S AM+ +QPK+K +Q R+ +++++Q E
Sbjct: 358 -----NFGVAIILLTCIVRGLMFPIAQKQFASMAAMRAVQPKMKELQDRHKDDKQKLQQE 412
Query: 185 TSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-WIPSLSGPTTIA 243
LY++ VNPLAGCLP L IP++ LY+ L + + + F WI LS P +
Sbjct: 413 LLALYQKEKVNPLAGCLPILLQIPIFYALYKVL--MLTIEMRHQPFIGWIKDLSAPDPMT 470
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLPVLLVVSQYASMELMKPP 293
L +D PP A+L VLP+LL ++ Y +L P
Sbjct: 471 PLN-------LFGLLDFTPP-------AFLAIGVLPILLGITMYLQFKLNPAP 509
>gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
paucivorans DSM 12260]
gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
paucivorans DSM 12260]
Length = 253
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 66/89 (74%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+SYG AIILLT+ V+V PL+ KQ+ S MQ +QP++K IQ++YAG++E++ E +L
Sbjct: 13 HSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYAGDKEKLNQEMMKL 72
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
Y++ GVNP AGC+P L +P++I LY+ L
Sbjct: 73 YKENGVNPAAGCMPLLVQLPIFILLYRVL 101
>gi|302341714|ref|YP_003806243.1| YidC/Oxa1 family membrane protein insertase [Desulfarculus baarsii
DSM 2075]
gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii
DSM 2075]
Length = 546
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ M L D ++ +YG AII++TV++K+ +PL K ES MQ
Sbjct: 329 GWFDVIAKPMLAGLNFFHDYVN------NYGVAIIIITVLIKLLFWPLQNKSYESMKKMQ 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+I I+++Y +++ + + +LY+ VNPL GCLP LA +PV+I Y+ L + +
Sbjct: 383 KLQPQIAKIREKYKDDKQEMNQQVMQLYKTYKVNPLGGCLPMLAQVPVFIAFYKVLGS-S 441
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFV-DGHPPL 264
E + WI LS P + I + +PFV DG P L
Sbjct: 442 IELRHAPFWLWINDLSAPDRLP-------IGFEIPFVGDGIPVL 478
>gi|302872912|ref|YP_003841548.1| YidC/Oxa1 family membrane protein insertase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
obsidiansis OB47]
Length = 341
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 72/120 (60%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK++ D + H+P SYG A+ILLT+IV+ PL KQ+ S
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q+++Q E +LY++ G NP AGC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQN 121
>gi|363892147|ref|ZP_09319318.1| YidC/Oxa1 family membrane protein insertase [Eubacteriaceae
bacterium CM2]
gi|402837210|ref|ZP_10885735.1| 60Kd inner membrane protein [Eubacteriaceae bacterium OBRC8]
gi|361964500|gb|EHL17533.1| YidC/Oxa1 family membrane protein insertase [Eubacteriaceae
bacterium CM2]
gi|402275327|gb|EJU24480.1| 60Kd inner membrane protein [Eubacteriaceae bacterium OBRC8]
Length = 255
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 23/162 (14%)
Query: 103 WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQN 162
WFG + LK+ D + +Y +IIL T++ K PLT Q+ S AM+
Sbjct: 7 WFGHL-------LKLFYD------MSNNYALSIILFTIVTKFILLPLTFSQMRSMNAMKT 53
Query: 163 LQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS---- 218
+QPK+ I ++Y GN ++ + S+LY++ GVNP AGCLP L P+ I +Y+ +
Sbjct: 54 IQPKVDEINKKYKGNPQKQSEKLSQLYKENGVNPAAGCLPLLIQFPILIAMYRVVREPIK 113
Query: 219 ----NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP 256
N L+ +GFFWI SL P IA + G + ++LP
Sbjct: 114 YVFLNETAYNLVDKGFFWIKSLEVPDVIAIQ--GINLPYILP 153
>gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
Length = 604
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 107 ISEAMEFVL-----KILKDGIDAVH--VPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
I + MEF L K+L G++ +H + SYG IIL+TV++K+ +PLT +S
Sbjct: 363 IDKVMEFGLFSPISKMLLLGMNWLHHRLSVSYGLTIILITVLIKIVFWPLTAFSTKSMKR 422
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQP+IKAIQ++Y +++ +T YR+ VNPL GCLP L IPV+ G + +
Sbjct: 423 MQALQPQIKAIQEKYKDEPQKVSQKTMEFYRKNKVNPLGGCLPALLQIPVFFGFFAMMRG 482
Query: 220 VANEGLLTEGFFWIPSLSGPTTI 242
L F W+ LS P TI
Sbjct: 483 AIE--LRGAHFLWMGDLSQPDTI 503
>gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC
[Magnetospirillum magneticum AMB-1]
gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum
AMB-1]
Length = 579
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 85 SGGAASTSADGATQKNG----------GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFA 134
+G + DG +K G GWF F+++ ++L++L + + G A
Sbjct: 327 TGAKQVSLLDGYAEKFGIDRFDLAIDFGWFYFLTKPFFYLLQMLHSALG------NMGLA 380
Query: 135 IILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGV 194
I+ LTVI+K+A FPL K + M+ LQPK++ +Q RYA ++ R+Q E LY+ V
Sbjct: 381 ILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQARYADDKMRLQQEMMALYKTEKV 440
Query: 195 NPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
NP++GCLP + IPV+ LY+ L V E + WI LS Q + I L
Sbjct: 441 NPVSGCLPIMVQIPVFFALYKVLF-VTIEMRHAPFYGWISDLSA-------QDPTNIFTL 492
Query: 255 LPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
+ PP +H L++ V + + Q + + P QA+
Sbjct: 493 FGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNPQPTDPVQAK 534
>gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC
[Borrelia turicatae 91E135]
gi|254772754|sp|A1QZM8.1|YIDC_BORT9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135]
Length = 545
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 23/181 (12%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
FI M+ +++I D I P ++G +II LT++V++ FPLT K +T + LQP
Sbjct: 322 FIQVPMQLIMQIFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQP 375
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
K+K IQ ++ + +R+ E +LYR+ GVNPL GCLP L +PV+ LY ++N
Sbjct: 376 KMKEIQVKFKNDPKRLNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNF----F 431
Query: 226 LTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA 285
L G +IP +I G I + G+ W D +LP +++++Q
Sbjct: 432 LLRGASFIPGWIDDLSI-----GDSIYYF-----GYKVFVWTDIR---ILPFIMMITQLL 478
Query: 286 S 286
S
Sbjct: 479 S 479
>gi|85374954|ref|YP_459016.1| preprotein translocase subunit YidC [Erythrobacter litoralis
HTCC2594]
gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594]
Length = 581
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L L D + ++G AIILLTVI++ FP+ +KQ S AM+
Sbjct: 341 GWFRWFEKPLLWLLNQLFDLVG------NFGVAIILLTVIIRGLLFPIAQKQFGSMAAMK 394
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ++Y ++++ Q E LY++ VNPLAGCLP L IP++ LY+ L +A
Sbjct: 395 AVQPKMKAIQEKYKDDKQKQQQEIMALYKEEKVNPLAGCLPLLIQIPIFFALYKVLI-LA 453
Query: 222 NEGLLTEGFFWIPSLSGP 239
E WI LS P
Sbjct: 454 IEMRHQPFALWIEDLSAP 471
>gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 403
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I+ ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 186 GWFTFIAKPMFEFLNFLHQYIE------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 239
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 240 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 298
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 299 IELKAAPWAFWIHDLS 314
>gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
Length = 537
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI++LT+IV+V FPLT K + S ++
Sbjct: 320 GWFTFIAKPMYVGLDFLFKHIG------NWGWAIVVLTLIVRVILFPLTYKSMISMNKLK 373
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 374 DLAPKMKEIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLFN-A 432
Query: 222 NEGLLTEGFFWIPSLSG 238
E FWI LS
Sbjct: 433 IELKDAPWIFWIQDLSA 449
>gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21]
gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21]
Length = 537
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI++LT+IV+V FPLT K + S ++
Sbjct: 320 GWFTFIAKPMYVGLDFLFKHIG------NWGWAIVVLTLIVRVILFPLTYKSMISMNKLK 373
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 374 DLAPKMKEIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLFN-A 432
Query: 222 NEGLLTEGFFWIPSLSG 238
E FWI LS
Sbjct: 433 IELKDAPWIFWIQDLSA 449
>gi|363890031|ref|ZP_09317378.1| hypothetical protein HMPREF9628_01820 [Eubacteriaceae bacterium
CM5]
gi|361966060|gb|EHL19004.1| hypothetical protein HMPREF9628_01820 [Eubacteriaceae bacterium
CM5]
Length = 253
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+Y +IIL T++ K PLT Q+ S AM+ +QPK+ I ++Y GN ++ + S+LY
Sbjct: 21 NYALSIILFTIVTKFILLPLTFSQMRSMNAMKTIQPKVDEINKKYKGNPQKQSEKLSQLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALS--------NVANEGLLTEGFFWIPSLSGPTT 241
++ GVNP AGCLP L P+ I +Y+ + N L+ +GFFWI SL P
Sbjct: 81 KENGVNPAAGCLPLLIQFPILIAMYRVVREPIKYVFLNETAYNLVDKGFFWIKSLEVPDV 140
Query: 242 IAARQSGSGISWLLP 256
IA + G + ++LP
Sbjct: 141 IAIQ--GINLPYILP 153
>gi|363894404|ref|ZP_09321490.1| hypothetical protein HMPREF9629_01816 [Eubacteriaceae bacterium
ACC19a]
gi|361962442|gb|EHL15570.1| hypothetical protein HMPREF9629_01816 [Eubacteriaceae bacterium
ACC19a]
Length = 252
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+Y +IIL T++ K PLT Q+ S AM+ +QPK+ I ++Y GN ++ + S+LY
Sbjct: 21 NYALSIILFTIVTKFILLPLTFSQMRSMNAMKTIQPKVDEINKKYKGNPQKQSEKLSQLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALS--------NVANEGLLTEGFFWIPSLSGPTT 241
++ GVNP AGCLP L P+ I +Y+ + N L+ +GFFWI SL P
Sbjct: 81 KENGVNPAAGCLPLLIQFPILIAMYRVVREPIKYVFLNETAYNLVDKGFFWIKSLEVPDV 140
Query: 242 IAARQSGSGISWLLP 256
IA + G + ++LP
Sbjct: 141 IAIQ--GINLPYILP 153
>gi|344997645|ref|YP_004799988.1| YidC/Oxa1 family membrane protein insertase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965864|gb|AEM75011.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
lactoaceticus 6A]
Length = 341
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK + D + H+P SYG A+ILLT+IV+ PL KQ++ST
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q ++Q E +LY++ G NP GC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQRKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQN 121
>gi|402814449|ref|ZP_10864043.1| membrane protein insertase YidC 2 [Paenibacillus alvei DSM 29]
gi|402508296|gb|EJW18817.1| membrane protein insertase YidC 2 [Paenibacillus alvei DSM 29]
Length = 257
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
YGFAI+LLTVIV++ PLT KQ+ S+ MQ LQP++ I++++ N ++ Q ET +L+
Sbjct: 68 EYGFAILLLTVIVRLCILPLTVKQMRSSKEMQKLQPQLAEIKKKHKDNPQKQQEETMKLF 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+Q VNPLAGCLP +PV+I LY A+ N + F W+
Sbjct: 128 QQHNVNPLAGCLPIFIQMPVFIALYNAIY--MNSAIREHTFLWL 169
>gi|406929761|gb|EKD65272.1| 60 kDa inner membrane insertion protein [uncultured bacterium]
Length = 270
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 25/156 (16%)
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+PY+ GF+I++LT+I++ A +PL Q+++ MQ L P + +++R+ G+ +RIQ ET
Sbjct: 28 IPYTLGFSIVILTIIIRFAMYPLMSTQIKAAKKMQELSPHLSKVKERHKGDAKRIQSETM 87
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLY---QALSNVANEGLLTE--------------- 228
RLY++ GVNP AGCLP L IPV LY Q S +++ +++E
Sbjct: 88 RLYKEHGVNPAAGCLPILIQIPVIWALYLVLQKFSALSSNSVVSEVNRIVYFDFLKIDKA 147
Query: 229 ---GFFWIPSLSGPTTIAARQSGSGIS-WLLPFVDG 260
FF +P P+T+ S G++ +L+PF G
Sbjct: 148 WDATFFGLPLGQNPSTLL---SSVGVAIFLIPFATG 180
>gi|424865582|ref|ZP_18289446.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
gi|400758591|gb|EJP72794.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
Length = 516
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FIS+ M + L ++ ++ ++ ++I++ T+++K+ FP+T K S M+
Sbjct: 302 GWFWFISQPMVWFLDLINTYLN------NWAYSIVVFTILLKLVLFPVTAKGFVSMGQMR 355
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ P +K +Q+RY +++R+ E LY++ VNPL GCLP LA +P +IG + AL +
Sbjct: 356 KVAPMMKDLQERYKDDKQRLSSEMMNLYKREKVNPLGGCLPVLAQVPFFIGFFFALREMV 415
Query: 222 NEGLLTEGFFWIPSLSGP 239
L FFWI LS P
Sbjct: 416 E--LRHASFFWISDLSIP 431
>gi|417318871|ref|ZP_12105431.1| hypothetical protein LM220_14040 [Listeria monocytogenes J1-220]
gi|328469001|gb|EGF39959.1| hypothetical protein LM220_14040 [Listeria monocytogenes J1-220]
Length = 268
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|284049399|ref|YP_003399738.1| YidC/Oxa1 family membrane protein insertase [Acidaminococcus
fermentans DSM 20731]
gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus
fermentans DSM 20731]
Length = 207
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII++T+++K+ PLT KQ+ ST AM +QPK+K +Q RY ++ + + S LY
Sbjct: 26 SYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKVTLNQKMSELY 85
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
+ GVNPLAGCLP L +P+ IG++ + + G F W+ S++ P
Sbjct: 86 KSEGVNPLAGCLPLLIQMPIMIGIFYGIRDFQYAG--PSSFLWMQSIADP 133
>gi|300024925|ref|YP_003757536.1| YidC/Oxa1 family membrane protein insertase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium
denitrificans ATCC 51888]
Length = 624
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 24/191 (12%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ + F L +G+ VH ++G I++LTV+VK A +PL KQ ES M+
Sbjct: 373 GWFYFITRPL-FRLMEFINGL--VH---NFGITILILTVLVKAAFYPLANKQYESMARMK 426
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ I+++Y + +R Q E LYR +NPLAGC P L IPV+ LY+ L V
Sbjct: 427 KLQPEMQRIKEQYKDDTQRQQKEIFELYRTQKINPLAGCWPILLQIPVFFALYKVLF-VT 485
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLPVL 278
+ F WI LS P S + LLPF D+ +L V P++
Sbjct: 486 IDMRHAPFFGWIHDLSAPDPT----SLFNLFGLLPF----------DSPTFLHIGVWPLI 531
Query: 279 LVVSQYASMEL 289
+ V+ + M+L
Sbjct: 532 MGVTMWMQMQL 542
>gi|149919109|ref|ZP_01907593.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica
SIR-1]
gi|149820039|gb|EDM79460.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica
SIR-1]
Length = 580
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 16/162 (9%)
Query: 81 LDSASGGAASTSADGATQKNGGWFGFISEAME-FVLKILKD--GIDAVHVPYSYGFAIIL 137
L++A G A + + D GWFG +SE + +L +L+ G+ V +G AII+
Sbjct: 338 LEAAEGIALTDAIDW------GWFGALSEYLGGMMLALLRYFYGLTGV-----WGVAIIM 386
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPL 197
LTV++K+ PLT KQ S M+ + P+++A++++Y +Q ++ E L+ + G +PL
Sbjct: 387 LTVVIKLTLLPLTIKQYRSMRKMKEINPEMQALREKYKDDQVKMNQEMQALFSRHGTSPL 446
Query: 198 AGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
+GC P L P+WI LY L V + L E F W+P L+ P
Sbjct: 447 SGCTPMLLQFPIWIALYAMLGAVVD--LYHESFLWLPDLTQP 486
>gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
Length = 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 33/183 (18%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S GFAIIL T++ ++ PLT K ++S+ MQ LQP +K +Q++Y + +++Q ET RLY
Sbjct: 24 SAGFAIILFTIVARIVILPLTIKSLQSSRKMQELQPHMKELQRKYGKDPQKLQEETMRLY 83
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN----------------VANEGLLTEGFFWI 233
R+ VNP+ GCLP L +P+++G+YQA+ N V NE + G
Sbjct: 84 REYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAEHAGSAMLRVLNEQGIAVGV--- 140
Query: 234 PSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
T+ Q WL P LG T Y +LP+L V+ Q ++LM P
Sbjct: 141 ----ASATLGQPQLAGSFLWL-------PDLG--KTDPYYILPILSVIFQLI-VQLMATP 186
Query: 294 QAR 296
+ +
Sbjct: 187 RVQ 189
>gi|374851299|dbj|BAL54263.1| preprotein translocase subunit YidC [uncultured planctomycete]
Length = 833
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 21/200 (10%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M +L I D ++ ++YG AI+LLTV+V++ FP+++KQ + MQ
Sbjct: 541 GWFWFVADPMTRLLHIFHD-----YIVFNYGLAIVLLTVVVRLLMFPISRKQALNAQKMQ 595
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS--- 218
LQP+IK IQ++Y QER + T L+RQ NP +GCL +P++IGLY+AL+
Sbjct: 596 ELQPEIKKIQEKYKDLQERNR-ATQELFRQHNYNPFSGCLVLFIQLPIFIGLYKALAIDV 654
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP--FVDGHPPLGWHDTAAYL-VL 275
+ L++E W +L+ P + S+L P F GH G Y +L
Sbjct: 655 ELRQAPLISESIRWCSNLAAPDMLF------DWSFLWPEWFNRGHGMFG---LGPYFNIL 705
Query: 276 PVLLVVSQYASMELMKPPQA 295
PVL + + M PP A
Sbjct: 706 PVLTIAIFLWQQKRMMPPPA 725
>gi|87198602|ref|YP_495859.1| inner membrane protein translocase component YidC [Novosphingobium
aromaticivorans DSM 12444]
gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans
DSM 12444]
Length = 600
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L + + ++G AIILLT+IV+ FP+ ++Q S AM+
Sbjct: 345 GWFRWFEKPIFWLLDSIFKKVG------NFGVAIILLTLIVRGVMFPIAQRQFASMAAMR 398
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+KAIQ+RY ++++ Q E LY++ VNPLAGCLP IPV+ LY+ L V
Sbjct: 399 ALQPKMKAIQERYKDDKQKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVL--VL 456
Query: 222 NEGLLTEGF-FWIPSLSGP 239
+ + F WI LS P
Sbjct: 457 TIEMRHQPFALWIKDLSAP 475
>gi|347526419|ref|YP_004833166.1| inner membrane protein OxaA [Sphingobium sp. SYK-6]
gi|345135100|dbj|BAK64709.1| inner membrane protein OxaA [Sphingobium sp. SYK-6]
Length = 574
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + ++L L I ++G AII LT IV+ FP+ ++Q S A
Sbjct: 339 DWGWFRWFEKPIFYLLDWLFRMIG------NFGVAIICLTFIVRGLMFPIAQRQFASMAA 392
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KAIQ+RY ++ + Q E LYR VNPLAGCLP IP++ LY+ L
Sbjct: 393 MRAIQPKMKAIQERYKDDKVKQQQEIMELYRSEKVNPLAGCLPIFLQIPIFFALYKVLM- 451
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+A E + WI LS P
Sbjct: 452 LAVEMRHQPFYLWIKDLSAP 471
>gi|345016445|ref|YP_004818799.1| YidC/Oxa1 family membrane protein insertase [Streptomyces
violaceusniger Tu 4113]
gi|344042794|gb|AEM88519.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
violaceusniger Tu 4113]
Length = 379
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 67/94 (71%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKL 92
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P +I LYQ L+++AN
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFISLYQVLNHIAN 126
>gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|386009635|ref|YP_005927913.1| membrane protein oxaA 1 [Listeria monocytogenes L99]
gi|386028262|ref|YP_005949038.1| hypothetical protein LMM7_2975 [Listeria monocytogenes M7]
gi|404409235|ref|YP_006691950.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2376]
gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99]
gi|336024843|gb|AEH93980.1| hypothetical protein LMM7_2975 [Listeria monocytogenes M7]
gi|404243384|emb|CBY64784.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2376]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|422810884|ref|ZP_16859295.1| membrane protein oxaA 1 precursor [Listeria monocytogenes FSL
J1-208]
gi|378751089|gb|EHY61680.1| membrane protein oxaA 1 precursor [Listeria monocytogenes FSL
J1-208]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|422407931|ref|ZP_16484892.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208]
gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208]
Length = 277
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 3 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 57
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 58 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 117
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 118 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 159
>gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2]
gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2]
Length = 551
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GW I++ + +VLK + ++YG +IILLT++VK+ +PLT K +S
Sbjct: 329 NFGWTDIIAKPLLYVLKFFDAYL------HNYGVSIILLTILVKILFWPLTHKSYKSMKE 382
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQP++ ++++Y G+++++ E LY+ VNP+ GCLP + IPV+ L++ L
Sbjct: 383 MQKLQPRMAKLREKYKGDKQKLNQEMMALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGA 442
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLG 265
E FWI LS P + S+ +PF+ PP G
Sbjct: 443 CI-ELRHAPFIFWINDLSAPDRLFH------FSFQIPFM--APPYG 479
>gi|422417425|ref|ZP_16494380.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067]
gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----SYAI 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKELQTKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|315286678|ref|ZP_07872171.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596]
gi|313630899|gb|EFR98590.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKELQTKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|365175443|ref|ZP_09362873.1| YidC/Oxa1 family membrane protein insertase [Synergistes sp.
3_1_syn1]
gi|363613007|gb|EHL64533.1| YidC/Oxa1 family membrane protein insertase [Synergistes sp.
3_1_syn1]
Length = 271
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 110 AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKA 169
A E +L IL+ H SYG AIILLT+ V++A +PL +KQ+ S MQ +QP +K
Sbjct: 8 ASELLLSILEFFYGITH---SYGLAIILLTIAVRIALYPLNQKQMLSMQHMQKIQPMLKV 64
Query: 170 IQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
IQ++YA ++E++ ET RLY++ VNP AGCLP + +P+ I L+ L
Sbjct: 65 IQEKYANDREKMNQETMRLYKEYKVNPAAGCLPLVVQLPILILLFNVL 112
>gi|333372845|ref|ZP_08464766.1| stage III sporulation protein J [Desmospora sp. 8437]
gi|332971199|gb|EGK10162.1| stage III sporulation protein J [Desmospora sp. 8437]
Length = 261
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVAT 146
G S + D + GF + F L+ L D + V S+G AI+ T+++++
Sbjct: 36 GGCSPNPDQMKPIDPKTAGFWEKYFVFPLQQLLDFFNDVLG--SWGLAILAATILIRLVV 93
Query: 147 FPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLAT 206
PLT KQ++S+ AMQ LQP++K +Q++Y NQ+++Q ET +L+++ VNPLAGCLP L
Sbjct: 94 LPLTLKQMKSSRAMQVLQPEMKKLQEKYKNNQQKLQEETMKLFQKHNVNPLAGCLPMLIQ 153
Query: 207 IPVWIGLYQAL 217
+P+ I YQA+
Sbjct: 154 LPILIAFYQAI 164
>gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003]
Length = 283
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|422420596|ref|ZP_16497549.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171]
gi|313640128|gb|EFS04745.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----SYAI 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKELQTKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 341
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N W F++ + +LK + D + H+P SYG A+ILLT+IV+ PL KQ++ST
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M + P+++ IQQ+Y +Q ++Q E +LY++ G NP GC P L P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQRKMQEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQN 121
>gi|418055469|ref|ZP_12693524.1| Membrane protein oxaA [Hyphomicrobium denitrificans 1NES1]
gi|353211051|gb|EHB76452.1| Membrane protein oxaA [Hyphomicrobium denitrificans 1NES1]
Length = 624
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ + F L +GI VH ++G I++LTV+VK A +PL KQ ES M+
Sbjct: 373 GWFYFITRPL-FRLMEFINGI--VH---NFGITILILTVLVKAAFYPLANKQYESMARMK 426
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ I+++Y + +R Q E LYR +NPLAGC P L IPV+ LY+ L V
Sbjct: 427 KLQPEMQRIKEQYKDDTQRQQKEIFELYRTQKINPLAGCWPVLLQIPVFFALYKVLF-VT 485
Query: 222 NEGLLTEGFFWIPSLSGP 239
+ F WI LS P
Sbjct: 486 IDMRHAPFFGWIHDLSAP 503
>gi|402825697|ref|ZP_10874961.1| membrane protein insertase [Sphingomonas sp. LH128]
gi|402260735|gb|EJU10834.1| membrane protein insertase [Sphingomonas sp. LH128]
Length = 587
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L L + ++G AIILLT+IV+ FP+ ++Q S AM+
Sbjct: 343 GWFRWFEKPIFWLLTKLFSLVG------NFGVAIILLTLIVRGMMFPVAQRQFASMAAMR 396
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ+RY ++++ Q E LY+Q VNPLAGCLP IPV+ LY+ L +A
Sbjct: 397 AIQPKMKAIQERYKDDKQKQQQEIMALYKQEKVNPLAGCLPMFLQIPVFFALYKTLI-LA 455
Query: 222 NEGLLTEGFFWIPSLSGP 239
E WI LS P
Sbjct: 456 IEMRHQPFVLWIKDLSAP 473
>gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515]
Length = 297
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|381166572|ref|ZP_09875786.1| Inner membrane protein oxaA [Phaeospirillum molischianum DSM 120]
gi|380684145|emb|CCG40598.1| Inner membrane protein oxaA [Phaeospirillum molischianum DSM 120]
Length = 573
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ ++L+IL + + G AI+ LTVI+K+A FPL K S M+
Sbjct: 347 GWFYFLTKPFFYMLQILHSALG------NMGLAILALTVILKLAMFPLANKSYVSMSKMK 400
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP ++A+Q R+ ++ R+Q E LY++ VNPL+GCLP L IPV+ LY+ L V
Sbjct: 401 KLQPAVQALQARFGEDKMRLQQEMMILYKKEKVNPLSGCLPVLVQIPVFFALYKVLF-VT 459
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E + WI LS PT I
Sbjct: 460 IEMRHAPFYGWIHDLSAQDPTNI 482
>gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
1336]
gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
1336]
Length = 528
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|222823561|ref|YP_002575135.1| inner membrane protein translocase component YidC [Campylobacter
lari RM2100]
gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100]
Length = 526
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 307 GWFTFIAKPMYEFLDFLHGYLG------NWGWAIVIMTLIVRIILFPLTYKSMISMNKLK 360
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ L LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 361 DLAPKMKEIRERYKGDPQKMNLHMMELYKKHGANPMSGCLPILIQIPIFFAIYRVLLN-A 419
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 420 IELKAAPWAFWITDLS 435
>gi|424865250|ref|ZP_18289119.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
gi|400758856|gb|EJP73056.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
Length = 496
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF F+S+ M ID ++ V ++G +I++ T+++K+ FP+T K +S AM
Sbjct: 289 GWFWFLSQPM-------VASIDFINGVVGNWGVSIVIFTILLKLLLFPVTGKGFKSMAAM 341
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ P++K +Q RY ++++I ET R+YR+ G NP+ GCLP +A +P ++ L+ L +
Sbjct: 342 RKAMPELKEVQDRYKNDRQKIGTETLRIYRKYGANPIGGCLPLIAQLPFFVALFFGLREM 401
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E + FFWI LS P
Sbjct: 402 V-ELRYSPFFFWIQDLSAP 419
>gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e]
gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194]
gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165]
gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503]
gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818]
gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262]
gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900]
gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175]
gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017]
gi|386045158|ref|YP_005963963.1| membrane protein OxaA [Listeria monocytogenes 10403S]
gi|386048586|ref|YP_005966918.1| spoJ protein [Listeria monocytogenes J0161]
gi|386051837|ref|YP_005969828.1| stage III sporulation protein J [Listeria monocytogenes FSL R2-561]
gi|386055032|ref|YP_005972590.1| OxaA-like protein [Listeria monocytogenes Finland 1998]
gi|386733555|ref|YP_006207051.1| hypothetical protein MUO_14335 [Listeria monocytogenes 07PF0776]
gi|404282426|ref|YP_006683324.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2755]
gi|404285363|ref|YP_006686260.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2372]
gi|404288238|ref|YP_006694824.1| membrane protein OxaA 1 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404412102|ref|YP_006697690.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC5850]
gi|404414929|ref|YP_006700516.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC7179]
gi|405751200|ref|YP_006674666.1| membrane protein OxaA 1 [Listeria monocytogenes ATCC 19117]
gi|405754075|ref|YP_006677540.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2378]
gi|405759919|ref|YP_006689195.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2479]
gi|406705593|ref|YP_006755947.1| membrane protein OxaA 1 precursor [Listeria monocytogenes L312]
gi|417314048|ref|ZP_12100754.1| hypothetical protein LM1816_03412 [Listeria monocytogenes J1816]
gi|424824603|ref|ZP_18249616.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A]
gi|38503109|sp|Q8Y3I2.1|YIDC2_LISMO RecName: Full=Membrane protein insertase YidC 2; AltName:
Full=Foldase YidC 2; AltName: Full=Membrane integrase
YidC 2; AltName: Full=Membrane protein YidC 2; Flags:
Precursor
gi|67461022|sp|Q71VQ8.1|YIDC1_LISMF RecName: Full=Membrane protein insertase YidC 1; AltName:
Full=Foldase YidC 1; AltName: Full=Membrane integrase
YidC 1; AltName: Full=Membrane protein YidC 1; Flags:
Precursor
gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e]
gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165]
gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503]
gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900]
gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262]
gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818]
gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194]
gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017]
gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes J1816]
gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A]
gi|345535577|gb|AEO05018.1| spoJ protein [Listeria monocytogenes J0161]
gi|345538392|gb|AEO07832.1| membrane protein oxaA 1 [Listeria monocytogenes 10403S]
gi|346425683|gb|AEO27208.1| stage III sporulation protein J [Listeria monocytogenes FSL R2-561]
gi|346647683|gb|AEO40308.1| OxaA-like protein [Listeria monocytogenes Finland 1998]
gi|384392313|gb|AFH81383.1| hypothetical protein MUO_14335 [Listeria monocytogenes 07PF0776]
gi|404220400|emb|CBY71764.1| membrane protein OxaA 1 precursor [Listeria monocytogenes ATCC
19117]
gi|404223275|emb|CBY74638.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2378]
gi|404229061|emb|CBY50466.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2755]
gi|404231928|emb|CBY53332.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC5850]
gi|404234865|emb|CBY56268.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2372]
gi|404237801|emb|CBY59203.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2479]
gi|404240628|emb|CBY62029.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC7179]
gi|404247167|emb|CBY05392.1| membrane protein OxaA 1 precursor [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|406362623|emb|CBY68896.1| membrane protein OxaA 1 precursor [Listeria monocytogenes L312]
gi|441472675|emb|CCQ22430.1| Membrane protein insertase YidC 2 [Listeria monocytogenes]
gi|441475826|emb|CCQ25580.1| Membrane protein insertase YidC 2 [Listeria monocytogenes N53-1]
Length = 287
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|171911028|ref|ZP_02926498.1| 60 kDa inner membrane insertion protein [Verrucomicrobium spinosum
DSM 4136]
Length = 618
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+S + F+L+ D + ++G AI+LLT+ V+ +P+ + + M
Sbjct: 354 GWFTFVSRGLVFLLRWFHD------LTGNWGVAIVLLTITVRSLLWPVQARSNATMKRMG 407
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
L PKIK +Q+++ + +++ E R+YR+ GVNPL GCLP L IP++ G Y L A
Sbjct: 408 LLAPKIKELQEKHKDDPQKVNTEMMRMYREYGVNPLGGCLPLLVQIPIFFGFYSVLRYAA 467
Query: 222 NEGLLTEGFF-WIPSLSGPTTI 242
L + FF WI LS P T+
Sbjct: 468 E--LRGQPFFGWIQDLSLPDTV 487
>gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
260.94]
gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81-176]
gi|419618021|ref|ZP_14151580.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 129-258]
gi|419669810|ref|ZP_14199577.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
260.94]
gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
81-176]
gi|380595853|gb|EIB16572.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 129-258]
gi|380646243|gb|EIB63221.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-11]
Length = 528
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|289436080|ref|YP_003465952.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172324|emb|CBH28870.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 287
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKELQTKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
Length = 278
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S G A+IL T+++K+A P+T + ST A++ +QP ++ +Q++Y +++R ET +LY
Sbjct: 24 SAGLAVILFTLLLKIALLPITVRTRRSTAALRAIQPALRELQEKYPDDRQRRSAETLKLY 83
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN--EGLLTEGFFWIPSLS 237
+Q G+NP AGCLPT+ IP +IGL A+ ++ +G TE F W+P L+
Sbjct: 84 QQHGINPAAGCLPTVIKIPFFIGLIAAIRELSRSGDGAWTESFLWLPDLA 133
>gi|441142562|ref|ZP_20962430.1| inner membrane protein translocase component YidC [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440622507|gb|ELQ85286.1| inner membrane protein translocase component YidC [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 395
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 66/93 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +LY
Sbjct: 34 AWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKLY 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
++ G NPL+ CLP LA P +I LYQ LS++AN
Sbjct: 94 KETGTNPLSSCLPILAQSPFFISLYQVLSHIAN 126
>gi|419648482|ref|ZP_14179821.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380626311|gb|EIB44788.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9217]
Length = 530
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
ATCC 35185]
gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
ATCC 35185]
Length = 222
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT+++KV +PLT KQV S MQ LQPK+K +Q++Y N + +Q + LY
Sbjct: 33 NYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNPQMMQQKIGELY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++AGVNPLAGCLP L +P+ +G++ AL A G T F W+ SLS P
Sbjct: 93 KEAGVNPLAGCLPLLIQMPILMGMFYALQGYAYSG--TPSFLWLASLSEP 140
>gi|402833257|ref|ZP_10881877.1| 60Kd inner membrane protein [Selenomonas sp. CM52]
gi|402281249|gb|EJU29940.1| 60Kd inner membrane protein [Selenomonas sp. CM52]
Length = 222
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIILLT+++KV +PLT KQV S MQ LQPK+K +Q++Y N + +Q + LY
Sbjct: 33 NYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNPQMMQQKIGELY 92
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++AGVNPLAGCLP L +P+ +G++ AL A G T F W+ SLS P
Sbjct: 93 KEAGVNPLAGCLPLLIQMPILMGMFYALQGYAYSG--TPSFLWLASLSEP 140
>gi|419641564|ref|ZP_14173454.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380616673|gb|EIB35864.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23357]
Length = 528
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|257792846|ref|YP_003183452.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM
2243]
gi|317489239|ref|ZP_07947756.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
1_3_56FAA]
gi|325832339|ref|ZP_08165338.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
gi|257476743|gb|ACV57063.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM
2243]
gi|316911640|gb|EFV33232.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
1_3_56FAA]
gi|325486175|gb|EGC88629.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
Length = 261
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 117 ILKDGI-DAVHVPYSY----GFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQ 171
+ KD I D +H Y + G AII++TVI ++ PL KQ +S+ MQ +QP ++ +Q
Sbjct: 4 VFKDWIFDIIHFFYDFCGDWGLAIIIVTVIFRILISPLMHKQTKSSFQMQKVQPLMQELQ 63
Query: 172 QRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE--GLLTEG 229
++YA +Q R+Q E +LY + NPLAGCLP L +P+++ L+Q LS + + G E
Sbjct: 64 RKYADDQPRLQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGSRTSGTTYEF 123
Query: 230 FFWIPSL 236
+ +PSL
Sbjct: 124 YNLVPSL 130
>gi|419659632|ref|ZP_14190155.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-979]
gi|380639003|gb|EIB56519.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-979]
Length = 530
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|419652478|ref|ZP_14183554.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-894]
gi|419694835|ref|ZP_14222783.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380629272|gb|EIB47542.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-894]
gi|380669198|gb|EIB84489.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 530
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|419642903|ref|ZP_14174677.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380623657|gb|EIB42353.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni ATCC 33560]
Length = 530
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|419683507|ref|ZP_14212201.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1213]
gi|380658511|gb|EIB74522.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1213]
Length = 530
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81116]
gi|384441579|ref|YP_005657882.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1]
gi|415744757|ref|ZP_11474704.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|419636028|ref|ZP_14168311.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 55037]
gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni
81116]
gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1]
gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|380610973|gb|EIB30539.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 55037]
Length = 530
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|57237786|ref|YP_179034.1| inner membrane protein translocase component YidC [Campylobacter
jejuni RM1221]
gi|384443312|ref|YP_005659564.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp.
jejuni S3]
gi|419620291|ref|ZP_14153734.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51494]
gi|419626880|ref|ZP_14159799.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23263]
gi|419633730|ref|ZP_14166157.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23269]
gi|419645142|ref|ZP_14176703.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|419646150|ref|ZP_14177625.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 53161]
gi|419653642|ref|ZP_14184608.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-872]
gi|419655024|ref|ZP_14185888.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658648|ref|ZP_14189261.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-1]
gi|419664520|ref|ZP_14194658.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-4]
gi|419666001|ref|ZP_14196052.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419667017|ref|ZP_14197001.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-10]
gi|419670968|ref|ZP_14200647.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-14]
gi|419672771|ref|ZP_14202258.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51037]
gi|419678286|ref|ZP_14207347.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87459]
gi|419686144|ref|ZP_14214583.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1798]
gi|419696308|ref|ZP_14224171.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23210]
gi|424846383|ref|ZP_18270978.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni NW]
gi|424849180|ref|ZP_18273645.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
D2600]
gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221]
gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp.
jejuni S3]
gi|356486026|gb|EHI16012.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni NW]
gi|356487549|gb|EHI17493.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
D2600]
gi|380600728|gb|EIB21055.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51494]
gi|380607717|gb|EIB27568.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23263]
gi|380611254|gb|EIB30810.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23269]
gi|380620857|gb|EIB39708.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|380624149|gb|EIB42814.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 53161]
gi|380632308|gb|EIB50406.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-872]
gi|380633128|gb|EIB51134.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-1]
gi|380637743|gb|EIB55354.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-988]
gi|380640788|gb|EIB58230.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-4]
gi|380642097|gb|EIB59385.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380646729|gb|EIB63680.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649974|gb|EIB66639.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-14]
gi|380655035|gb|EIB71368.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51037]
gi|380661070|gb|EIB76991.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87459]
gi|380665226|gb|EIB80803.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1798]
gi|380674728|gb|EIB89652.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23210]
Length = 530
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|374998020|ref|YP_004973519.1| preprotein translocase subunit YidC [Desulfosporosinus orientis DSM
765]
gi|357216386|gb|AET71004.1| preprotein translocase subunit YidC [Desulfosporosinus orientis DSM
765]
Length = 224
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I E M ++L IL + + + +YG AIILLT+++K FPLT KQ+ S +LQPK
Sbjct: 4 IVEGMTYLLNILYNLSSTIGLA-NYGVAIILLTILIKTLIFPLTYKQMASMRKTVDLQPK 62
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
IKAIQ++Y N+E+ LY++ VNPL GCLP + +P++ LY AL +
Sbjct: 63 IKAIQEKYKNNKEKANAAVMELYKEHQVNPLGGCLPIVVQLPIFWALYSALRH 115
>gi|406878357|gb|EKD27280.1| OxaA [uncultured bacterium]
Length = 537
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 126 HVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLET 185
++ ++YG AIIL+T++ K+ T+PLTKK + S MQ LQP ++ ++++Y + ++Q ET
Sbjct: 342 NLTHNYGIAIILMTLVFKIVTYPLTKKAMVSMKNMQKLQPYVEQLKKQYKDDPMQMQKET 401
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW-IPSLSGPTTI 242
LY++ VNPL GCLP L +P++I YQA+SN L FW I L+ P I
Sbjct: 402 MLLYKKHQVNPLQGCLPLLIQMPIFIAFYQAISNSVE---LQGAAFWIIKDLAAPDKI 456
>gi|404494833|ref|YP_006718939.1| preprotein translocase subunit YidC [Pelobacter carbinolicus DSM
2380]
gi|77546816|gb|ABA90378.1| preprotein translocase subunit YidC [Pelobacter carbinolicus DSM
2380]
Length = 542
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+F ++ + VLK + + +YG AIILLTV +KV +PLT K +S MQ
Sbjct: 331 GFFDMLARPLLSVLKFCHKNLIS-----NYGVAIILLTVFIKVLFWPLTHKSYKSMRDMQ 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ ++++Y ++ER+ E LYR+ VNP+ GCLP A IPV+ LY+ L +
Sbjct: 386 KLQPEMQRLREKYKKDKERMNREIMELYRKNRVNPMGGCLPMFAQIPVFFALYKVL--LG 443
Query: 222 NEGLLTEGF-FWIPSLSG 238
+ L E F FWI L+
Sbjct: 444 SIALRHEPFIFWIQDLAA 461
>gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562577|ref|YP_002344356.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|317511993|ref|ZP_07969249.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|384448210|ref|YP_005656261.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni IA3902]
gi|403055700|ref|YP_006633105.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407942353|ref|YP_006857995.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
PT14]
gi|419650629|ref|ZP_14181843.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419662216|ref|ZP_14192522.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-831]
gi|419676025|ref|ZP_14205273.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 110-21]
gi|419676640|ref|ZP_14205807.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87330]
gi|419680753|ref|ZP_14209607.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 140-16]
gi|419691020|ref|ZP_14219205.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1893]
gi|419691589|ref|ZP_14219704.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1928]
gi|38503224|sp|Q9PNX7.1|YIDC_CAMJE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|380628231|gb|EIB46556.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380638642|gb|EIB56181.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-831]
gi|380650911|gb|EIB67511.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 110-21]
gi|380655844|gb|EIB72140.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87330]
gi|380659747|gb|EIB75714.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 140-16]
gi|380667871|gb|EIB83273.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1893]
gi|380671987|gb|EIB87175.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1928]
gi|401781352|emb|CCK67055.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407906191|gb|AFU43020.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
PT14]
Length = 528
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|392406969|ref|YP_006443577.1| membrane protein insertase [Anaerobaculum mobile DSM 13181]
gi|390620105|gb|AFM21252.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
protein [Anaerobaculum mobile DSM 13181]
Length = 274
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 67/93 (72%)
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+ +SYG AIILLT++V+V +PL+ KQ+ S MQ +QP++K +Q++Y +++++ E
Sbjct: 22 ISHSYGVAIILLTILVRVLLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKDDKQKLNQEVM 81
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
+LYR+ GVNP AGCLP L +P+ I L++ + N
Sbjct: 82 KLYREYGVNPAAGCLPLLVQLPILILLFKVIMN 114
>gi|424715685|ref|YP_007016400.1| Membrane protein insertase YidC 2 [Listeria monocytogenes serotype
4b str. LL195]
gi|424014869|emb|CCO65409.1| Membrane protein insertase YidC 2 [Listeria monocytogenes serotype
4b str. LL195]
Length = 293
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 19 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 73
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 74 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 133
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 134 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 175
>gi|419626127|ref|ZP_14159125.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|419688772|ref|ZP_14217088.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1854]
gi|380603741|gb|EIB23808.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380664881|gb|EIB80468.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1854]
Length = 530
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|419623405|ref|ZP_14156533.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419630066|ref|ZP_14162772.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 60004]
gi|419637547|ref|ZP_14169710.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639128|ref|ZP_14171165.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 86605]
gi|380600927|gb|EIB21250.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380606367|gb|EIB26282.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 60004]
gi|380615151|gb|EIB34432.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380617129|gb|EIB36311.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 86605]
Length = 530
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|347550157|ref|YP_004856485.1| putative SpoIIIJ protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346983228|emb|CBW87282.1| Putative SpoIIIJ protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 287
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G S++ G W +I + +V+ D +Y
Sbjct: 13 IASLVIGLMTVLTGCGSSTDPITKDSTGFWSQYIVYPLSWVITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMVKQLKSQKAMTSLQPKIKELQTKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S E + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISR--TEAIKTDTFLWM 169
>gi|94263631|ref|ZP_01287440.1| 60 kDa inner membrane insertion protein [delta proteobacterium
MLMS-1]
gi|93455936|gb|EAT06091.1| 60 kDa inner membrane insertion protein [delta proteobacterium
MLMS-1]
Length = 559
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF F++ +VL + +YG AII++T+++K+ +PLT K ++S
Sbjct: 342 NFGWFDFLARPAFYVLSFFHGMVG------NYGLAIIMVTILIKILFWPLTHKGLKSMKV 395
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ +QP++ +++++ +++R Q E +LY+ VNPL GCLP L IPV+ LY+ L
Sbjct: 396 MQKIQPRMAKLREKFKDDKQRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQ 455
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 254
+ E WI LS P + G I WL
Sbjct: 456 -SVELRHAPFMLWINDLSAPDRLYI---GFDIPWL 486
>gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
414]
gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
414]
Length = 454
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 237 GWFTFIAKPMFEFLDFLHQYIG------NWGWAIVVMTLIVRIVLFPLTYKSMISMNKLK 290
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 291 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 349
Query: 222 NEGLLTEGFFWIPSLS 237
E FW+ LS
Sbjct: 350 IELKAAPWAFWVHDLS 365
>gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. NAP1]
gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. NAP1]
Length = 595
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L+ L + ++G AIILLTVI++ FP+ +KQ S M+
Sbjct: 346 GWFEWFEKPLLWLLRTLNGLVG------NFGVAIILLTVIIRGLLFPIAQKQFASMAQMK 399
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ+RY +++ Q + LY++ VNPLAGCLP L IP++ LY+ L +A
Sbjct: 400 AVQPKMKAIQERYKDDKQTQQQKIMELYKEEKVNPLAGCLPLLIQIPIFFALYKVLY-LA 458
Query: 222 NEGLLTEGFFWIPSLSGP 239
E + E F ++ LS P
Sbjct: 459 IE-MRHEPFLYMSDLSAP 475
>gi|313891402|ref|ZP_07825018.1| putative stage III sporulation protein J [Dialister microaerophilus
UPII 345-E]
gi|313120177|gb|EFR43353.1| putative stage III sporulation protein J [Dialister microaerophilus
UPII 345-E]
Length = 266
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQ 164
G+++E M F L+ + P SYG AII LTVI+KV PL KQ++S MQ +Q
Sbjct: 14 GYLAEIMRFCLQFCYGITQDLGYP-SYGIAIIALTVIIKVILLPLAIKQIKSMKGMQEVQ 72
Query: 165 PKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG 224
P++ AIQ++Y ++ R E RLY + GV+PL+GCLP L +P I ++ AL +
Sbjct: 73 PQLAAIQKKYKNDKMRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAIFYALQGFPYDP 132
Query: 225 LLTEGFFWIPSLSGP 239
F W+ SL+ P
Sbjct: 133 -NHASFLWLESLAVP 146
>gi|164686450|ref|ZP_02210478.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM
16795]
gi|164604461|gb|EDQ97926.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
bartlettii DSM 16795]
Length = 254
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 125 VHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLE 184
V++ Y ++II+ T++V++ PL KQ++ST AMQ++QPK++ IQ++Y E+ Q E
Sbjct: 17 VNIVGDYAWSIIIFTILVRLCLMPLMIKQIKSTKAMQDIQPKMQEIQEKYKNKPEKQQEE 76
Query: 185 TSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL---------TEGFFWIPS 235
+LY+ A +NP+AGCLP +P+ +GL+ L + G+ GF WI S
Sbjct: 77 LMKLYKDAKINPMAGCLPMFIQLPILMGLFALLRDPVAHGVFATEAAYHAANHGFLWIAS 136
Query: 236 LS 237
+S
Sbjct: 137 VS 138
>gi|338741686|ref|YP_004678648.1| transmembrane protein, OxaA-like, preprotein translocase component
[Hyphomicrobium sp. MC1]
gi|337762249|emb|CCB68084.1| transmembrane protein, OxaA-like, preprotein translocase component
[Hyphomicrobium sp. MC1]
Length = 630
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF FI+ + F L + +G+ VH ++G I++LTVIVK A +PL KQ ES
Sbjct: 373 DWGWFYFITRPL-FSLMEMINGV--VH---NFGITILVLTVIVKAAFYPLASKQYESMAR 426
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QP+++ I+++Y + +R Q E LYR +NPLAGC P L IPV+ LY+ L
Sbjct: 427 MKKMQPEMQRIKEQYKDDPQRQQKEIFDLYRTQKINPLAGCWPILLQIPVFFALYKVLF- 485
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V + F WI LS P
Sbjct: 486 VTIDMRHAPFFGWIHDLSAP 505
>gi|415729978|ref|ZP_11472737.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315928320|gb|EFV07635.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 500
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
VL426]
gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
VL426]
Length = 541
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ V ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQS------VVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|419698323|ref|ZP_14226038.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380675319|gb|EIB90227.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23211]
Length = 530
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPLAFWIHDLS 441
>gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 [Paenibacillus polymyxa E681]
gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681]
Length = 288
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 83 SASGGAASTSADGATQKNGG-WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVI 141
S A S A NG W ++ + L YG A+++L +I
Sbjct: 25 SGCAQTAHNSYTTADLANGSFWQRYVVYWFSYALDTFAQWFSG-----EYGLAVLILVII 79
Query: 142 VKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCL 201
V+ PLT KQV S+ AMQ +QP++K IQ +Y E++Q ET +L+++ VNP+AGCL
Sbjct: 80 VRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPEKVQQETMKLFQENKVNPMAGCL 139
Query: 202 PTLATIPVWIGLYQALSNVANEGLLTEGFFW-----------IPSLSGPTTIAARQSGSG 250
P + +P++I LY A+ N L F W +P L+ TT
Sbjct: 140 PLVVQMPIFIALYNAI--YYNSALRDHDFLWLQLGKPDHLFILPILAAITTFVQ------ 191
Query: 251 ISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQY 284
+W++ ++ P G Y V PVL++ Y
Sbjct: 192 -TWMMMKMNPTPQQGPMQFLLY-VYPVLILFMSY 223
>gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653]
gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653]
Length = 378
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 67/95 (70%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ+++T MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYKSDKQRQSEEMMKL 92
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
Y++ G NPL+ CLP LA P +I LYQ L+++AN
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFIALYQVLNHIANN 127
>gi|392389448|ref|YP_006426051.1| membrane protein insertase [Ornithobacterium rhinotracheale DSM
15997]
gi|390520526|gb|AFL96257.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 604
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG--NQERIQLETSR 187
YG+ I LLT++VK+ T P+ KQ + + M+ L+P ++AI ++Y G NQ + Q ET
Sbjct: 354 KYGWVIALLTIVVKLITSPIMYKQYKQSAMMRVLKPDMEAINEKYKGPENQMKRQQETMN 413
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LYR AGVNPLAGCLP L IP++ L+ NV L +GF W L+ +I
Sbjct: 414 LYRTAGVNPLAGCLPALLQIPIFYALFNFFPNVIQ--LRGKGFLWADDLTAYDSIMH--- 468
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
LPF P G H + L+ V +V+ S +M+ P+
Sbjct: 469 -------LPF--NIPFYGNHVSLFALMYVVTMVIYFKFSGNMMQTPK 506
>gi|424657894|ref|ZP_18095168.1| inner membrane protein oxaA [Vibrio cholerae HE-16]
gi|408057322|gb|EKG92174.1| inner membrane protein oxaA [Vibrio cholerae HE-16]
Length = 541
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ V ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQS------VVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|374988135|ref|YP_004963630.1| putative inner membrane protein translocase component YidC
[Streptomyces bingchenggensis BCW-1]
gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC
[Streptomyces bingchenggensis BCW-1]
Length = 387
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ+++T MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYKSDRQRQSEEMMKL 92
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Y++ G NPL+ CLP LA P +I LYQ L+++AN T GF
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFISLYQVLNHIANN--RTVGF 132
>gi|424589279|ref|ZP_18028743.1| inner membrane protein oxaA [Vibrio cholerae CP1037(10)]
gi|408037997|gb|EKG74357.1| inner membrane protein oxaA [Vibrio cholerae CP1037(10)]
Length = 541
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|329121491|ref|ZP_08250115.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM
19965]
gi|327469406|gb|EGF14876.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM
19965]
Length = 266
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQ 164
G+++E M F L+ + P SYG AII LTVI+KV PL KQ++S MQ +Q
Sbjct: 14 GYLAEIMRFCLQFCYGITQDLGYP-SYGIAIIALTVIIKVILLPLAIKQIKSMKGMQEVQ 72
Query: 165 PKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG 224
P++ AIQ++Y ++ R E RLY + GV+PL+GCLP L +P I ++ AL +
Sbjct: 73 PQLAAIQKKYKNDKMRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAIFYALQGFPYDP 132
Query: 225 LLTEGFFWIPSLSGP 239
F W+ SL+ P
Sbjct: 133 NHV-SFLWLESLAVP 146
>gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum
V4]
gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum
V4]
Length = 592
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG IIL T+++K +PL K + AMQ L PK+K +Q RY +++Q E +LY
Sbjct: 381 NYGLDIILFTLLLKGIFWPLQSKANRNMKAMQALSPKLKELQARYKDQPDKMQAEMMKLY 440
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
R+ GVNPL GCLP L IP++IG Y L L + F WI L+ P TI
Sbjct: 441 REYGVNPLGGCLPMLVQIPIFIGFYTMLQGSVE--LRNQSFLWIRDLTKPDTI 491
>gi|419834945|ref|ZP_14358395.1| inner membrane protein oxaA [Vibrio cholerae HC-46B1]
gi|422908520|ref|ZP_16943212.1| inner membrane protein oxaA [Vibrio cholerae HE-09]
gi|423733284|ref|ZP_17706523.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-41B1]
gi|424007585|ref|ZP_17750547.1| inner membrane protein oxaA [Vibrio cholerae HC-44C1]
gi|341640450|gb|EGS65039.1| inner membrane protein oxaA [Vibrio cholerae HE-09]
gi|408632750|gb|EKL05185.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-41B1]
gi|408859673|gb|EKL99328.1| inner membrane protein oxaA [Vibrio cholerae HC-46B1]
gi|408868335|gb|EKM07671.1| inner membrane protein oxaA [Vibrio cholerae HC-44C1]
Length = 541
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|421352773|ref|ZP_15803113.1| inner membrane protein oxaA [Vibrio cholerae HE-45]
gi|395956921|gb|EJH67510.1| inner membrane protein oxaA [Vibrio cholerae HE-45]
Length = 541
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 530
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLYQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385]
gi|429885488|ref|ZP_19367074.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae PS15]
gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385]
gi|429227710|gb|EKY33698.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae PS15]
Length = 541
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|295697833|ref|YP_003591071.1| YidC/Oxa1 family membrane protein insertase [Kyrpidia tusciae DSM
2912]
gi|295413435|gb|ADG07927.1| membrane protein insertase, YidC/Oxa1 family [Kyrpidia tusciae DSM
2912]
Length = 246
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 41/218 (18%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAV-HVPYSYG 132
L AA+ L +G + + + ++ W F+ DGID + YG
Sbjct: 8 LFGAAMVLLVVTGCSVAPTTVAPVDRSTWWGAFVGW--------FSDGIDLFARWTHDYG 59
Query: 133 FAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQA 192
AI+++T+++++ T PL +Q++ + MQ +QP+ + ++Q+Y N+E++ E +L++Q
Sbjct: 60 IAILVVTILIRLITLPLWLRQMKYSKVMQEMQPQFQKLRQKYGDNKEKLNEEMVKLFQQT 119
Query: 193 GVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGIS 252
GVNPL+GCLPTL +P+ LYQA+ +N L F
Sbjct: 120 GVNPLSGCLPTLIQLPILWALYQAIR--SNAMLQAHEFL--------------------- 156
Query: 253 WLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELM 290
G PLG D Y +LPVL V+ Y ++M
Sbjct: 157 -------GIWPLGQPD--HYFILPVLAAVTTYIQSKMM 185
>gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus
cellulolyticus 11B]
gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus
cellulolyticus 11B]
Length = 315
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +++LLTVIV++ FPL KQV S AM L PK+K +Q +Y ++ER+ ET LY
Sbjct: 34 TWGLSVVLLTVIVRILLFPLFVKQVRSQRAMTELAPKLKELQAKYKNDRERLGTETMALY 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG 224
R+ GVNP GCLP LA PV+ L+ L V++ G
Sbjct: 94 REHGVNPFMGCLPILAQAPVFYALFHVLRYVSDHG 128
>gi|389797479|ref|ZP_10200520.1| preprotein translocase subunit YidC [Rhodanobacter sp. 116-2]
gi|388447111|gb|EIM03124.1| preprotein translocase subunit YidC [Rhodanobacter sp. 116-2]
Length = 578
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 38 STRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGAT 97
S R + + P LS+ S L S +S LY + ++D+ + G T
Sbjct: 311 SAHPRYLIRTVGPALSVASGQSLTS-----QSRLYVGPNKQGTMDAIAPGLDLTI----- 360
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+ G F I+ M +VL V ++G AIILL +++K ++ LT Q S+
Sbjct: 361 --DYGMFKIIAVPMHWVLSQFH------AVSRNWGVAIILLVLLIKGLSWKLTAIQYRSS 412
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQP+++A+++RY +++++Q LY++ VNP+ GCLP L T+PV+ GLY L
Sbjct: 413 ARMRKLQPRVQALKERYGDDKQKMQTAMMELYKKEKVNPMGGCLPVLITLPVFYGLYFVL 472
Query: 218 SNVANEGLLTEGFFWIPSLSGPT-----TIAARQSGSGISWLLPFVDGHPPLGWHDTAAY 272
+ L F WIP LS P I G WL P G P
Sbjct: 473 MDSLE--LRHAAFLWIPDLSAPDPFYILPIIYALVMLGTQWLNPVAAGMDPT---QAKMM 527
Query: 273 LVLPVLLVV 281
V+P+L V
Sbjct: 528 KVMPLLFTV 536
>gi|421341620|ref|ZP_15792031.1| inner membrane protein oxaA [Vibrio cholerae HC-43B1]
gi|395948248|gb|EJH58901.1| inner membrane protein oxaA [Vibrio cholerae HC-43B1]
Length = 482
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 270 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 323
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 324 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 381
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 382 SVELRHSPFFGWIHDLSA 399
>gi|354582053|ref|ZP_09000956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus lactis
154]
gi|353200670|gb|EHB66130.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus lactis
154]
Length = 292
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
Query: 78 AVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIIL 137
AV++ S A + KNGG F + + + D A YG ++++
Sbjct: 20 AVAVISGCAPGADQTRSIEDLKNGG---FWQSNVVYYFTLALDTF-ATWFNGEYGLSVLV 75
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPL 197
+ +IV+ PLT KQV S+ AMQ +QP+++ I+++Y N E++Q+ET +L+++ VNP+
Sbjct: 76 MVLIVRTLILPLTLKQVRSSKAMQAIQPEVQKIREKYKDNPEKMQMETMKLFQENKVNPM 135
Query: 198 AGCLPTLATIPVWIGLYQALSNVANEGLLTEG-FFWI 233
AGCLP L +P++I LY + + GLL E F W+
Sbjct: 136 AGCLPLLVQMPIFIALYHS---IYYNGLLREHEFLWM 169
>gi|422921250|ref|ZP_16954499.1| inner membrane protein oxaA [Vibrio cholerae BJG-01]
gi|341649439|gb|EGS73415.1| inner membrane protein oxaA [Vibrio cholerae BJG-01]
Length = 541
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|339446360|ref|YP_004712364.1| preprotein translocase subunit YidC [Eggerthella sp. YY7918]
gi|338906112|dbj|BAK45963.1| preprotein translocase subunit YidC [Eggerthella sp. YY7918]
Length = 261
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 117 ILKDGI-DAVHVPYSY----GFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQ 171
+ KD I D + Y + G AII++TVI ++ PL KQ +ST MQ +QP I+ IQ
Sbjct: 4 VFKDWIFDVIQFFYGFCGDWGLAIIIVTVIFRILISPLMHKQTKSTYGMQKVQPLIQEIQ 63
Query: 172 QRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN--EGLLTEG 229
++YA + R+Q E +LY + NPLAGCLP L +P++I L+Q LS + + +G E
Sbjct: 64 RKYADDPPRLQEEMQKLYAEVKFNPLAGCLPMLLQMPIFIALFQVLSEMGSRTQGTTYEF 123
Query: 230 FFWIPSL-SGPTTIAARQSGSGISWLL 255
+ +PSL P+ A+ G+ + +L+
Sbjct: 124 YNLVPSLVMRPSEAFAQGFGTFVPYLI 150
>gi|317154269|ref|YP_004122317.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
aespoeensis Aspo-2]
gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
aespoeensis Aspo-2]
Length = 554
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + L D + ++YG AIILLT+++K+ +PL+++ S M+
Sbjct: 335 GWFDFLAKPLLIGLNFFYDYV------HNYGIAIILLTIVIKLIFWPLSQRSYASMEQMK 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP ++ ++++Y +++R+ ET LY+ VNP+ GCLP + IPV+ GLY+AL
Sbjct: 389 KLQPMVQKLREKYGDDKQRLNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKAL 444
>gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
Length = 482
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 270 GWLWFIAKPLHWLLSVIQNFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 323
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 324 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 381
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 382 SVELRHSPFFGWIHDLSA 399
>gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. SD-21]
gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. SD-21]
Length = 579
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 84/138 (60%), Gaps = 8/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + ++LK + + ++G AII+LT+IV+ FP+ +KQ S AM+
Sbjct: 335 GWFRWFEKPFLWLLK------NIFALVGNFGVAIIILTIIVRGLMFPIAQKQFASMAAMK 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+K +Q+R+ ++ + Q E +L+++ VNPLAGCLP + IP++ LY+ L +A
Sbjct: 389 AIQPKMKKLQERHKDDKVKQQQEMQKLFKEEQVNPLAGCLPLILQIPIFFALYKVLY-LA 447
Query: 222 NEGLLTEGFFWIPSLSGP 239
E + + F WI LS P
Sbjct: 448 IE-MRHQNFLWIEDLSAP 464
>gi|220933190|ref|YP_002510098.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H
168]
gi|219994500|gb|ACL71103.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H
168]
Length = 217
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 32/180 (17%)
Query: 105 GFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQ 164
G+++E M L +L + + ++YG AII+LT+ +K+ +PLT KQ +S AMQ+LQ
Sbjct: 2 GWLTEIMTDTLILLNNWV------HNYGLAIIILTIFIKLLLYPLTAKQTKSMKAMQDLQ 55
Query: 165 PKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN-- 222
P++K IQ++Y N+E+ Q E +LY++ VNP AGC P + + + L++A+S + +
Sbjct: 56 PEMKKIQEKYKDNKEKQQEEMMKLYQEHNVNPAAGCFPMILQLFIIWPLFRAISGLKDIM 115
Query: 223 ---------EGLLTEGFFWIPSLS----------GPTTIAARQSGSG-----ISWLLPFV 258
G LTEG P ++ G T + + +G+ I W++PF+
Sbjct: 116 APEEATFLWIGNLTEGSLATPDITLIIINVIAMIGQTYLTQKWTGNNSQNNAIMWVMPFI 175
>gi|83591337|ref|YP_431346.1| protein translocase subunit yidC [Moorella thermoacetica ATCC
39073]
gi|83574251|gb|ABC20803.1| protein translocase subunit yidC [Moorella thermoacetica ATCC
39073]
Length = 225
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
F+S++++F+ I K A+ +P +YG AIIL T+ VKV +PLT +Q+ S +Q LQP
Sbjct: 7 FLSQSIQFLYNITK----AIGIP-NYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQP 61
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG- 224
KI+ +Q++Y N ++ Q LY++ VNPL GCLP L +P+ L+ +L + N
Sbjct: 62 KIQELQKKYKSNPQKAQQAMMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPAL 121
Query: 225 -----LLTEGFFWIPSLSGP 239
L F WI +L P
Sbjct: 122 NPTVNLAHANFLWISNLGQP 141
>gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum
magnetotacticum MS-1]
Length = 578
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 14/195 (7%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ ++L++L + + G AI+ LTVI+K+A FPL K + M+
Sbjct: 353 GWFYFLTKPFFYLLQMLHSALG------NMGLAILALTVILKLAMFPLANKSYVAMGKMK 406
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +Q RYA ++ R+Q E LY+ VNP++GCLP + IPV+ LY+ L V
Sbjct: 407 KLQPKVQELQARYADDKMRLQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLF-VT 465
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E + WI LS Q + I L + PP H L++ + + +
Sbjct: 466 IEMRHAPFYGWISDLSA-------QDPTNIFTLFGLIPWTPPHIMHLGVWPLIMGITMYL 518
Query: 282 SQYASMELMKPPQAR 296
Q + + P QA+
Sbjct: 519 QQKLNPQPTDPVQAK 533
>gi|383460053|ref|YP_005374042.1| inner membrane protein [Corallococcus coralloides DSM 2259]
gi|380733713|gb|AFE09715.1| inner membrane protein [Corallococcus coralloides DSM 2259]
Length = 606
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 7/118 (5%)
Query: 104 FGFISEAMEFVLKILK--DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
FG + + +L I+K GI ++G AIILLTV+VK+A PLT + + S A++
Sbjct: 377 FGIWAVVCKLLLAIMKFFHGIVG-----NWGVAIILLTVVVKLALLPLTYRSMVSMEAVK 431
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
LQPK++ I++++A ++ER LE +LY++A VNPL GCLP L +PVWI L+ +L N
Sbjct: 432 VLQPKMEEIRKKFADDKERQNLEIMKLYQEAKVNPLGGCLPLLIQMPVWIALFTSLRN 489
>gi|452852122|ref|YP_007493806.1| Inner membrane protein oxaA [Desulfovibrio piezophilus]
gi|451895776|emb|CCH48655.1| Inner membrane protein oxaA [Desulfovibrio piezophilus]
Length = 555
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 6/118 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF F+++ M L D + +YG AIILLT+++K+ +PL++K S
Sbjct: 333 NFGWFDFLAKPMLIGLNFFYDYVG------NYGVAIILLTLVIKLIFWPLSQKSYGSMEQ 386
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQP + ++++Y +++R+ ET LY+ VNP+ GCLP + IPV+ GLY+AL
Sbjct: 387 MKKLQPMVAKLREKYGDDKQRLNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKAL 444
>gi|385800983|ref|YP_005837387.1| YidC/Oxa1 family membrane protein insertase [Halanaerobium
praevalens DSM 2228]
gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium
praevalens DSM 2228]
Length = 216
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AII+ T+++K+A +PLT KQ S MQ +QP++K IQ +Y ++E+ Q E +LY
Sbjct: 22 NYGSAIIIFTLLIKIALYPLTAKQTRSMREMQEIQPEMKKIQNKYEDDKEKQQEEMMKLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ GVNP AGCLP + + + I LY+ + + ++ + +E F WI +++
Sbjct: 82 QEHGVNPAAGCLPMIVQMAILIPLYRTIFALGDK-MASEAFLWIGTIT 128
>gi|419632262|ref|ZP_14164816.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419684444|ref|ZP_14213043.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1577]
gi|380609168|gb|EIB28862.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380667022|gb|EIB82505.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1577]
Length = 530
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMYMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|419622826|ref|ZP_14156045.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380598388|gb|EIB18799.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 530
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI+ +T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFLHQYIG------NWGWAIVAMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
Length = 267
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SY II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET
Sbjct: 44 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 103
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
RLY++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 104 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 149
>gi|409349180|ref|ZP_11232710.1| Membrane protein oxaA [Lactobacillus equicursoris CIP 110162]
gi|407878368|emb|CCK84768.1| Membrane protein oxaA [Lactobacillus equicursoris CIP 110162]
Length = 291
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG+AI++ TVI++V PL Q+ ST MQ++QP++KA+Q++Y+G+ + ++ ET
Sbjct: 71 SYGWAIVIFTVIIRVILLPLNAMQINSTKKMQDVQPELKALQEKYSGSDLETKTKLNEET 130
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+LY++AGVNP AGCLP L +PV LYQA+
Sbjct: 131 QKLYKEAGVNPYAGCLPMLIQLPVMWALYQAI 162
>gi|442325062|ref|YP_007365083.1| hypothetical protein MYSTI_08133 [Myxococcus stipitatus DSM 14675]
gi|441492704|gb|AGC49399.1| hypothetical protein MYSTI_08133 [Myxococcus stipitatus DSM 14675]
Length = 605
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 9/130 (6%)
Query: 104 FGFISEAMEFVLKILK--DGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
FG + + +L I+K G+ ++G AIILLTV+VK+ PLT + + S ++
Sbjct: 378 FGIWAVICKLLLTIMKFFHGLTG-----NWGVAIILLTVVVKMVLLPLTYRSMVSMEEVK 432
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ I+++YA N+E+ LE +LY++A VNPL GCLP L +PVWI L+ AL N
Sbjct: 433 KLQPRMEEIRKKYADNREQQNLEIMKLYQEAKVNPLGGCLPLLIQMPVWIALFTALRNSF 492
Query: 222 NEGLLTEGFF 231
+ L E FF
Sbjct: 493 D--LYGEPFF 500
>gi|408409785|ref|ZP_11181063.1| Membrane protein oxaA [Lactobacillus sp. 66c]
gi|407876026|emb|CCK82869.1| Membrane protein oxaA [Lactobacillus sp. 66c]
Length = 291
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG+AI++ TVI++V PL Q+ ST MQ++QP++KA+Q++Y+G+ + ++ ET
Sbjct: 71 SYGWAIVIFTVIIRVILLPLNAMQINSTKKMQDVQPELKALQEKYSGSDLETKTKLNEET 130
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+LY++AGVNP AGCLP L +PV LYQA+
Sbjct: 131 QKLYKEAGVNPYAGCLPMLIQLPVMWALYQAI 162
>gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC
[Campylobacter fetus subsp. fetus 82-40]
gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus
82-40]
Length = 531
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L L + I ++GFAI+ LT+++++ FPLT K + S ++
Sbjct: 312 GWFTFIAKPMFLLLSWLHNYIG------NWGFAIVALTIVIRIVLFPLTYKGMVSMNKLK 365
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K IQ +Y G+ ++ LY++ G NP+ GCLP L IP++ +Y+ L N A
Sbjct: 366 DLAPKMKEIQAKYKGDPSKLNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLN-A 424
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI L+
Sbjct: 425 IELKGAPWIFWIKDLA 440
>gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
ATCC 49242]
gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
ATCC 49242]
Length = 591
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
Query: 100 NGGWFGFISEAM----EFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+ GWF FI+ M +F+ ++L + +G AI+ +TVIVK A PL K +
Sbjct: 344 DWGWFYFITRPMFRLIDFLYRVLGN----------FGLAILAVTVIVKAAFLPLANKSYK 393
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S M+ +QPKIK ++++Y ++ + +E LY++ VNP +GCLP L IPV+ LY+
Sbjct: 394 SIAKMKEIQPKIKELKEKYGDDKHKFNMEQMELYKREKVNPASGCLPVLLQIPVFFSLYK 453
Query: 216 ALSNVANEGLLTEGFFWIPSLSGP 239
L V E F WI LS P
Sbjct: 454 VLV-VTIEMRHAPFFGWIKDLSAP 476
>gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
Length = 541
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG--PTTIAARQSGSGI 251
+ L FF WI LS P I Q G+ +
Sbjct: 441 SVELRHSPFFGWIHDLSAQDPYYILPLQMGASM 473
>gi|421858596|ref|ZP_16290861.1| preprotein translocase [Paenibacillus popilliae ATCC 14706]
gi|410831892|dbj|GAC41298.1| preprotein translocase [Paenibacillus popilliae ATCC 14706]
Length = 239
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
YG AI+LLT+IV+ PLT KQ+ S+ MQ LQPK+ I+++Y N ++ Q ET +L+
Sbjct: 50 EYGLAILLLTIIVRSLILPLTVKQMRSSKEMQKLQPKLNEIKKKYGDNPQKQQEETMKLF 109
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+Q VNPLAGCLP + +PV+I LY ++ N + F W+
Sbjct: 110 QQHNVNPLAGCLPMIIQMPVFIALYNSI--YMNSEIREHTFLWL 151
>gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei
269.97]
Length = 530
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L I ++G+AI+++T+IV++ FPLT K + S ++
Sbjct: 313 GWFTFIAKPMFEFLNFFHQYIG------NWGWAIVVMTLIVRIILFPLTYKSMISMNKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 367 DLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 425
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 426 IELKAAPWAFWIHDLS 441
>gi|261884151|ref|ZP_06008190.1| putative inner membrane protein translocase component YidC
[Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 146
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L L + I ++GFAI+ LT+++++ FPLT K + S ++
Sbjct: 8 GWFTFIAKPMFLLLSWLHNYIG------NWGFAIVALTIVIRIVLFPLTYKGMVSMNKLK 61
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K IQ +Y G+ ++ LY++ G NP+ GCLP L IP++ +Y+ L N A
Sbjct: 62 DLAPKMKEIQAKYKGDPSKLNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLN-A 120
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI L+
Sbjct: 121 IELKGAPWIFWIKDLA 136
>gi|313672991|ref|YP_004051102.1| membrane protein insertase, yidc/oxa1 family [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939747|gb|ADR18939.1| membrane protein insertase, YidC/Oxa1 family [Calditerrivibrio
nitroreducens DSM 19672]
Length = 504
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ M LK I +YG AII+LT+IVK+ T+PLT K + S MQ
Sbjct: 300 GWFKFLAVPM------LKFMIFIYSFTKNYGVAIIILTIIVKLLTYPLTIKSMTSMKKMQ 353
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+QPK+ I++++ + +++ LYR+ GVNP+ GCLP + IP++ LY+AL
Sbjct: 354 QIQPKLMEIKEKFKNDPQKMNTAMMELYRKHGVNPMGGCLPMIIQIPIFFALYKAL 409
>gi|417822169|ref|ZP_12468771.1| inner membrane protein oxaA [Vibrio cholerae HE48]
gi|340049782|gb|EGR10694.1| inner membrane protein oxaA [Vibrio cholerae HE48]
Length = 541
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|422305402|ref|ZP_16392607.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1035(8)]
gi|408629028|gb|EKL01742.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1035(8)]
Length = 541
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|410458113|ref|ZP_11311876.1| OxaA-like protein precursor [Bacillus azotoformans LMG 9581]
gi|409931741|gb|EKN68717.1| OxaA-like protein precursor [Bacillus azotoformans LMG 9581]
Length = 255
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 83/130 (63%), Gaps = 13/130 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG +II++T+I+++A PL KQ +++ AMQ +QP++K +QQ+YA Q+++Q ET
Sbjct: 58 NYGLSIIVVTIIIRLAILPLMIKQTQNSKAMQAIQPELKELQQKYASKDPKTQQKLQQET 117
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL---SNVANEGLL------TEGFFWIPSL 236
L+++ GVNPLAGC P + +P+ IG Y A+ + +AN L + F+ +P +
Sbjct: 118 MALFQRHGVNPLAGCFPLVIQMPILIGFYHAIMRTAEIANHSFLWFDLGDKDPFYILPLI 177
Query: 237 SGPTTIAARQ 246
+G TT ++
Sbjct: 178 AGLTTFLQQK 187
>gi|405756983|ref|YP_006680447.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2540]
gi|404226183|emb|CBY77545.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2540]
Length = 287
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + V+K + SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVYPLSAVIKWFSELFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + + F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTA--AIKGDTFLWM 169
>gi|254991919|ref|ZP_05274109.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-064]
Length = 287
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + V+K + SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVYPLSAVIKWFSELFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + + F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTA--AIKGDTFLWM 169
>gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
Length = 541
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|383318450|ref|YP_005379292.1| preprotein translocase subunit YidC [Frateuria aurantia DSM 6220]
gi|379045554|gb|AFC87610.1| preprotein translocase subunit YidC [Frateuria aurantia DSM 6220]
Length = 559
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 45/196 (22%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + ++L L+ + ++G AIILL +++K A + LT Q S M+
Sbjct: 344 GWFTLIAQPLHWLLSKLE------ALCGNWGLAIILLVLVIKAAIWKLTALQFYSAARMR 397
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP++ A+++RY ++ ++Q LY++ VNP+AGCLP L T PV+IGLY+ LS
Sbjct: 398 KLQPRVDALKERYGDDKMKMQQAMMDLYKKEKVNPMAGCLPVLITFPVFIGLYRVLSE-- 455
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ RQ+ P GW HD + Y +LP
Sbjct: 456 -------------------SVELRQA--------------PFYGWIHDLSVQDPYFILPA 482
Query: 278 LLVVSQYASMELMKPP 293
L V+ A+ L PP
Sbjct: 483 LYVLVMLATQWLTPPP 498
>gi|452963741|gb|EME68800.1| membrane protein insertase [Magnetospirillum sp. SO-1]
Length = 577
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 14/195 (7%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ ++L++L + + G AI+ LTV++K+A FPL K + M+
Sbjct: 352 GWFYFLTKPFFYLLQMLHTALG------NMGLAILALTVVLKLAMFPLANKSYMAMGKMK 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ +Q RYA ++ R+Q E LY+ VNP++GCLP L IPV+ LY+ L V
Sbjct: 406 KLQPRVQELQARYADDKMRLQQEMMALYKAEKVNPVSGCLPILIQIPVFFALYKVLF-VT 464
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E + WI LS Q + I LL + PP H L++ V + +
Sbjct: 465 IEMRHAPFYGWISDLSA-------QDPTNIFTLLGLIPWTPPSFMHLGIWPLIMGVTMWL 517
Query: 282 SQYASMELMKPPQAR 296
Q + + P QA+
Sbjct: 518 QQKLNPQPTDPVQAK 532
>gi|407775415|ref|ZP_11122709.1| putative inner membrane protein translocase component YidC
[Thalassospira profundimaris WP0211]
gi|407281422|gb|EKF06984.1| putative inner membrane protein translocase component YidC
[Thalassospira profundimaris WP0211]
Length = 568
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+ L+ A LD+ + T+ D A + GWF F+++ L+ L H+
Sbjct: 312 ETRLFAGAKEVTLLDTYAEDYGITNFDLAI--DFGWFYFLTKPFFLFLQYL------YHL 363
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
++G +I+++TVI+K FPL K +S AM+ LQP+I +++++ +++R Q E
Sbjct: 364 VGNFGVSILIITVIIKAIMFPLANKSYKSMSAMKKLQPQITEMREKFKDDRQRQQQEMMA 423
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
LY++ +NP +GCLP + IPV+ LY+ L V+ E F WI LS P
Sbjct: 424 LYKREKINPASGCLPIVVQIPVFFALYKVLF-VSIEMRHAPFFGWIQDLSAP 474
>gi|419539368|ref|ZP_14078701.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 90-3]
gi|419547631|ref|ZP_14086325.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2680]
gi|419551313|ref|ZP_14089768.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2688]
gi|419557821|ref|ZP_14095718.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 80352]
gi|419577728|ref|ZP_14114273.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 59-2]
gi|419596948|ref|ZP_14131940.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23341]
gi|419598708|ref|ZP_14133585.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23342]
gi|380515207|gb|EIA41385.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 90-3]
gi|380520222|gb|EIA46111.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2680]
gi|380528688|gb|EIA53925.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2688]
gi|380541115|gb|EIA65394.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 80352]
gi|380556590|gb|EIA79836.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 59-2]
gi|380574686|gb|EIA96781.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23341]
gi|380576933|gb|EIA98978.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23342]
Length = 531
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|419537409|ref|ZP_14076852.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 111-3]
gi|419540817|ref|ZP_14080048.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z163]
gi|419543079|ref|ZP_14082176.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2548]
gi|419553439|ref|ZP_14091682.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2692]
gi|419614765|ref|ZP_14148536.1| putative inner membrane protein translocase component YidC
[Campylobacter coli H56]
gi|419616675|ref|ZP_14150318.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z156]
gi|380514789|gb|EIA40992.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 111-3]
gi|380515963|gb|EIA42107.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z163]
gi|380521096|gb|EIA46844.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2548]
gi|380528776|gb|EIA54001.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2692]
gi|380592331|gb|EIB13237.1| putative inner membrane protein translocase component YidC
[Campylobacter coli H56]
gi|380595256|gb|EIB16002.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z156]
Length = 531
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|384412415|ref|YP_005621780.1| YidC/Oxa1 family membrane protein insertase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|335932789|gb|AEH63329.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 579
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY ++ R++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E WI LS P
Sbjct: 448 VTIESRHQPFILWIKDLSAP 467
>gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
Length = 482
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 270 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 323
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 324 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 381
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 382 SVELRHSPFFGWIHDLSA 399
>gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
gi|419544910|ref|ZP_14083850.1| membrane protein insertase [Campylobacter coli 2553]
gi|419548433|ref|ZP_14087057.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2685]
gi|419556151|ref|ZP_14094143.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 84-2]
gi|419561384|ref|ZP_14098995.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 86119]
gi|419563407|ref|ZP_14100854.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1091]
gi|419564815|ref|ZP_14102183.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1098]
gi|419566990|ref|ZP_14104231.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1148]
gi|419567882|ref|ZP_14105033.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1417]
gi|419573961|ref|ZP_14110742.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1891]
gi|419576125|ref|ZP_14112791.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1909]
gi|419579968|ref|ZP_14116354.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1948]
gi|419582014|ref|ZP_14118288.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1957]
gi|419583662|ref|ZP_14119835.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1961]
gi|419585902|ref|ZP_14121940.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 202/04]
gi|419591599|ref|ZP_14126944.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 37/05]
gi|419592908|ref|ZP_14128147.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9854]
gi|419603611|ref|ZP_14138149.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 151-9]
gi|419606738|ref|ZP_14141094.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9860]
gi|419610008|ref|ZP_14144082.1| membrane protein insertase [Campylobacter coli H8]
gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
gi|380524615|gb|EIA50215.1| membrane protein insertase [Campylobacter coli 2553]
gi|380527448|gb|EIA52828.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2685]
gi|380535094|gb|EIA59828.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 84-2]
gi|380535690|gb|EIA60377.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 86119]
gi|380538187|gb|EIA62699.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1091]
gi|380541278|gb|EIA65549.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1098]
gi|380544884|gb|EIA68888.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1148]
gi|380547085|gb|EIA71015.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1417]
gi|380550475|gb|EIA74133.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1891]
gi|380551727|gb|EIA75308.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1909]
gi|380555792|gb|EIA79083.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1948]
gi|380557269|gb|EIA80487.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1957]
gi|380561246|gb|EIA84194.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 202/04]
gi|380562376|gb|EIA85247.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1961]
gi|380567874|gb|EIA90368.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 37/05]
gi|380571582|gb|EIA93960.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9854]
gi|380578286|gb|EIB00144.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 151-9]
gi|380586606|gb|EIB07893.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9860]
gi|380591060|gb|EIB12057.1| membrane protein insertase [Campylobacter coli H8]
Length = 531
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|416115074|ref|ZP_11593942.1| Inner membrane protein translocase component YidC2C [Campylobacter
concisus UNSWCD]
gi|384577866|gb|EIF07140.1| Inner membrane protein translocase component YidC2C [Campylobacter
concisus UNSWCD]
Length = 518
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 302 GWFTFIAKPMFAFLNFLHNYIG------NWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLK 355
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
L PK+K IQ +Y +++++Q+ LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 356 ELAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLN 413
>gi|365152937|ref|ZP_09349383.1| YidC/Oxa1 family membrane protein insertase [Campylobacter sp.
10_1_50]
gi|363652644|gb|EHL91677.1| YidC/Oxa1 family membrane protein insertase [Campylobacter sp.
10_1_50]
Length = 518
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 302 GWFTFIAKPMFAFLNFLHNYIG------NWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLK 355
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
L PK+K IQ +Y +++++Q+ LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 356 ELAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLN 413
>gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20]
gi|419595811|ref|ZP_14130903.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23336]
gi|419601125|ref|ZP_14135852.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23344]
gi|419613129|ref|ZP_14146985.1| membrane protein insertase [Campylobacter coli H9]
gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20]
gi|380572834|gb|EIA95012.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23336]
gi|380582159|gb|EIB03846.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23344]
gi|380588555|gb|EIB09667.1| membrane protein insertase [Campylobacter coli H9]
Length = 531
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|157164729|ref|YP_001466647.1| inner membrane protein translocase component YidC [Campylobacter
concisus 13826]
gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826]
Length = 517
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 302 GWFTFIAKPMFAFLNFLHNYIG------NWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLK 355
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
L PK+K IQ +Y +++++Q+ LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 356 ELAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLN 413
>gi|419605470|ref|ZP_14139905.1| membrane protein insertase [Campylobacter coli LMG 9853]
gi|380578117|gb|EIA99993.1| membrane protein insertase [Campylobacter coli LMG 9853]
Length = 531
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC
[Borrelia hermsii DAH]
gi|254772751|sp|B2S0E5.1|YIDC_BORHD RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH]
Length = 545
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
FI M+ +++I + I P ++G +I+ LT++V++ FPLT K +T + LQP
Sbjct: 322 FIQVPMQLIMQIFYNVI-----P-NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQP 375
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
K+K IQ ++ + +R+ E +LYR+ GVNPL GC P L +PV+ LY ++N
Sbjct: 376 KMKEIQVKFKNDPKRLNEEMGKLYREEGVNPLGGCFPILLQLPVFFALYGLVNNF----F 431
Query: 226 LTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA 285
L G +IP +I G I + G+ W D +LP +++V+Q
Sbjct: 432 LLRGASFIPGWIDDLSI-----GDSIYYF-----GYKVFMWTDIR---ILPFIMMVTQLI 478
Query: 286 S 286
S
Sbjct: 479 S 479
>gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 579
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 31/208 (14%)
Query: 55 DSSIDLNSVFSRTESLLYTLADAAVS-LDSASGGAASTSAD---GATQK----------- 99
+ I +++ F R+ S + AD V+ + A+G ASTS D GA +
Sbjct: 268 NQKIAIDTDF-RSSSNHHYQADFTVAPVMVAAGKTASTSVDVFAGAKEVRVLDRYRDQLH 326
Query: 100 --------NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTK 151
+ GWF I + + L L +HV +YG AIIL+ ++ FP+
Sbjct: 327 LPHFDKAIDWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIAN 380
Query: 152 KQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
KQ S +M+ LQPK++A+++RY ++ R++ E LY++ VNP AGCLP P++I
Sbjct: 381 KQYASMASMRRLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFI 440
Query: 212 GLYQALSNVANEGLLTEGFFWIPSLSGP 239
LY+ L V E WI LS P
Sbjct: 441 ALYKTLL-VTIESRHQPFILWIKDLSAP 467
>gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
DSM 684]
gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
DSM 684]
Length = 527
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YGF+IILLTVI+K+ +PLT+K S AMQ +QP++K ++++Y ++E + + LY
Sbjct: 345 NYGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGNDRESLNRKMMELY 404
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
R+ VNPL GCLP L IPV+ LY+ L E FWI LS
Sbjct: 405 REHRVNPLGGCLPMLVQIPVFFALYKVLLGTI-ELRHAPFIFWITDLS 451
>gi|56552522|ref|YP_163361.1| inner membrane protein translocase component YidC [Zymomonas
mobilis subsp. mobilis ZM4]
gi|59803051|sp|Q9RNL5.2|YIDC_ZYMMO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 579
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY ++ R++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E WI LS P
Sbjct: 448 VTIESRHQPFILWIKDLSAP 467
>gi|330470829|ref|YP_004408572.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
AB-18-032]
gi|328813800|gb|AEB47972.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
AB-18-032]
Length = 325
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L DA+ VP +S+ AII L V V+V FP+ KQ++S
Sbjct: 6 WIYYAISWILLAWHSAWDAIGVPETAVLGTNWSWILAIIFLVVTVRVILFPIFVKQIKSQ 65
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQP++KA+Q+++ G++E +Q E LYR+ NPL GCLP IPV++GL+ L
Sbjct: 66 RAMQALQPQVKALQEKHKGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVL 125
Query: 218 SNV 220
+
Sbjct: 126 RRL 128
>gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 579
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY ++ R++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E WI LS P
Sbjct: 448 VTIESRHQPFILWIKDLSAP 467
>gi|423743514|ref|ZP_17710872.1| membrane protein insertase, YidC/Oxa1 family, partial [Vibrio
cholerae HC-50A2]
gi|408645768|gb|EKL17405.1| membrane protein insertase, YidC/Oxa1 family, partial [Vibrio
cholerae HC-50A2]
Length = 464
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|398784329|ref|ZP_10547593.1| inner membrane protein translocase component YidC [Streptomyces
auratus AGR0001]
gi|396995252|gb|EJJ06270.1| inner membrane protein translocase component YidC [Streptomyces
auratus AGR0001]
Length = 383
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +LY
Sbjct: 34 AWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKLY 93
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
++ G NPL+ CLP LA P +I LYQ LS++A
Sbjct: 94 KETGTNPLSSCLPILAQSPFFISLYQVLSHIAQ 126
>gi|159040588|ref|YP_001539841.1| 60 kDa inner membrane insertion protein [Salinispora arenicola
CNS-205]
gi|157919423|gb|ABW00851.1| 60 kDa inner membrane insertion protein [Salinispora arenicola
CNS-205]
Length = 338
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L + DA+ VP +++ AII L V V+V FP+ KQ++S
Sbjct: 5 WIYYAISWILLLWHQAWDAIGVPDGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQ 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQP++KA+Q+++ G++E +Q E LYR+ NPL GCLP IPV++GL+ L
Sbjct: 65 RAMQALQPQVKALQEKHKGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVL 124
Query: 218 SNV 220
+
Sbjct: 125 RRL 127
>gi|419589526|ref|ZP_14125317.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 317/04]
gi|380567166|gb|EIA89705.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 317/04]
Length = 531
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L + I ++G+AI+++ +I+++ FPLT K + S ++
Sbjct: 317 GWFTFIAKPMFEFLNFLHNHIG------NWGWAIVIMVLIIRIILFPLTYKSMISMNKLK 370
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +++RY G+ +++ + LY++ G NP++GCLP L IP++ +Y+ L N A
Sbjct: 371 DLAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-A 429
Query: 222 NEGLLTEGFFWIPSLS 237
E FWI LS
Sbjct: 430 IELKAAPWAFWIHDLS 445
>gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
Length = 568
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 24/193 (12%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + I ++G AII LT +V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEKPIFALLHWLFEHIG------NFGVAIICLTFVVRAIMFPIAQRQFSSMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK+KA+Q+++ +++++Q++ LY+Q VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRALQPKMKALQEKHKDDKQQLQMKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVLM- 446
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLP 276
+ E WI LS P + I L +D PP A+L VL
Sbjct: 447 LTIEMRHQPFVLWIKDLSAPDPLH-------ILNLFGLLDFTPP-------AFLGIGVLA 492
Query: 277 VLLVVSQYASMEL 289
+LL +S Y +L
Sbjct: 493 LLLGISMYFQFKL 505
>gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|259515682|sp|B8DP11.1|YIDC_DESVM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 539
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF I+ + +L+ + +YG AIILLTV++K+ +PL+ K +S
Sbjct: 326 NLGWFSIIARPLVDMLEFFHKYVG------NYGVAIILLTVVIKLVFWPLSHKSYKSMEQ 379
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP ++ +++++ ++E++ E RLY+ VNP GCLP L IPV+ GLYQAL N
Sbjct: 380 MKKLQPMLQKLREKHGDDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLN 439
>gi|15640036|ref|NP_062588.1| inner membrane protein translocase component YidC [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
gi|147674272|ref|YP_001218407.1| inner membrane protein translocase component YidC [Vibrio cholerae
O395]
gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
gi|227080241|ref|YP_002808792.1| putative inner membrane protein translocase component YidC [Vibrio
cholerae M66-2]
gi|227116543|ref|YP_002818439.1| putative Inner membrane protein [Vibrio cholerae O395]
gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae
MJ-1236]
gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10]
gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757]
gi|360036771|ref|YP_004938534.1| hypothetical protein Vch1786_I2407 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379739911|ref|YP_005331880.1| membrane protein insertase [Vibrio cholerae IEC224]
gi|417811087|ref|ZP_12457755.1| inner membrane protein oxaA [Vibrio cholerae HC-49A2]
gi|417814839|ref|ZP_12461483.1| inner membrane protein oxaA [Vibrio cholerae HCUF01]
gi|417818606|ref|ZP_12465228.1| inner membrane protein oxaA [Vibrio cholerae HE39]
gi|418330716|ref|ZP_12941683.1| inner membrane protein oxaA [Vibrio cholerae HC-06A1]
gi|418339179|ref|ZP_12948071.1| inner membrane protein oxaA [Vibrio cholerae HC-23A1]
gi|418342249|ref|ZP_12949070.1| inner membrane protein oxaA [Vibrio cholerae HC-28A1]
gi|418347430|ref|ZP_12952172.1| inner membrane protein oxaA [Vibrio cholerae HC-43A1]
gi|418356634|ref|ZP_12959350.1| inner membrane protein oxaA [Vibrio cholerae HC-61A1]
gi|419824480|ref|ZP_14347993.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1033(6)]
gi|419827709|ref|ZP_14351204.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-1A2]
gi|419831332|ref|ZP_14354807.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-61A2]
gi|421315259|ref|ZP_15765835.1| inner membrane protein oxaA [Vibrio cholerae CP1032(5)]
gi|421318807|ref|ZP_15769371.1| inner membrane protein oxaA [Vibrio cholerae CP1038(11)]
gi|421322860|ref|ZP_15773395.1| inner membrane protein oxaA [Vibrio cholerae CP1041(14)]
gi|421326312|ref|ZP_15776833.1| inner membrane protein oxaA [Vibrio cholerae CP1042(15)]
gi|421330237|ref|ZP_15780725.1| inner membrane protein oxaA [Vibrio cholerae CP1046(19)]
gi|421333929|ref|ZP_15784403.1| inner membrane protein oxaA [Vibrio cholerae CP1048(21)]
gi|421337745|ref|ZP_15788189.1| inner membrane protein oxaA [Vibrio cholerae HC-20A2]
gi|421345265|ref|ZP_15795655.1| inner membrane protein oxaA [Vibrio cholerae HC-46A1]
gi|421348886|ref|ZP_15799257.1| inner membrane protein oxaA [Vibrio cholerae HE-25]
gi|422890031|ref|ZP_16932490.1| inner membrane protein oxaA [Vibrio cholerae HC-40A1]
gi|422900603|ref|ZP_16936239.1| inner membrane protein oxaA [Vibrio cholerae HC-48A1]
gi|422905001|ref|ZP_16939887.1| inner membrane protein oxaA [Vibrio cholerae HC-70A1]
gi|422911749|ref|ZP_16946298.1| inner membrane protein oxaA [Vibrio cholerae HFU-02]
gi|422915736|ref|ZP_16950101.1| inner membrane protein oxaA [Vibrio cholerae HC-02A1]
gi|422924215|ref|ZP_16957284.1| inner membrane protein oxaA [Vibrio cholerae HC-38A1]
gi|423143281|ref|ZP_17130915.1| inner membrane protein oxaA [Vibrio cholerae HC-19A1]
gi|423148261|ref|ZP_17135638.1| inner membrane protein oxaA [Vibrio cholerae HC-21A1]
gi|423152050|ref|ZP_17139280.1| inner membrane protein oxaA [Vibrio cholerae HC-22A1]
gi|423154841|ref|ZP_17141992.1| inner membrane protein oxaA [Vibrio cholerae HC-32A1]
gi|423158705|ref|ZP_17145691.1| inner membrane protein oxaA [Vibrio cholerae HC-33A2]
gi|423163368|ref|ZP_17150183.1| inner membrane protein oxaA [Vibrio cholerae HC-48B2]
gi|423729371|ref|ZP_17702721.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-17A1]
gi|423810644|ref|ZP_17714690.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-55C2]
gi|423844882|ref|ZP_17718428.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-59A1]
gi|423876914|ref|ZP_17722095.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-60A1]
gi|423887676|ref|ZP_17724938.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-62A1]
gi|423920146|ref|ZP_17729551.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-77A1]
gi|423961696|ref|ZP_17735802.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-40]
gi|423986053|ref|ZP_17739358.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-46]
gi|423994669|ref|ZP_17739433.1| inner membrane protein oxaA [Vibrio cholerae HC-02C1]
gi|424000551|ref|ZP_17743660.1| inner membrane protein oxaA [Vibrio cholerae HC-17A2]
gi|424007527|ref|ZP_17750491.1| inner membrane protein oxaA [Vibrio cholerae HC-37A1]
gi|424011951|ref|ZP_17754716.1| inner membrane protein oxaA [Vibrio cholerae HC-55B2]
gi|424017963|ref|ZP_17757781.1| inner membrane protein oxaA [Vibrio cholerae HC-59B1]
gi|424022514|ref|ZP_17762196.1| inner membrane protein oxaA [Vibrio cholerae HC-62B1]
gi|424025533|ref|ZP_17765169.1| inner membrane protein oxaA [Vibrio cholerae HC-69A1]
gi|424584905|ref|ZP_18024516.1| inner membrane protein oxaA [Vibrio cholerae CP1030(3)]
gi|424593531|ref|ZP_18032889.1| inner membrane protein oxaA [Vibrio cholerae CP1040(13)]
gi|424597460|ref|ZP_18036676.1| inner membrane protein oxaA [Vibrio Cholerae CP1044(17)]
gi|424600237|ref|ZP_18039410.1| inner membrane protein oxaA [Vibrio cholerae CP1047(20)]
gi|424605136|ref|ZP_18044122.1| inner membrane protein oxaA [Vibrio cholerae CP1050(23)]
gi|424608862|ref|ZP_18047739.1| inner membrane protein oxaA [Vibrio cholerae HC-39A1]
gi|424611767|ref|ZP_18050594.1| inner membrane protein oxaA [Vibrio cholerae HC-41A1]
gi|424615658|ref|ZP_18054368.1| inner membrane protein oxaA [Vibrio cholerae HC-42A1]
gi|424620404|ref|ZP_18058951.1| inner membrane protein oxaA [Vibrio cholerae HC-47A1]
gi|424623344|ref|ZP_18061836.1| inner membrane protein oxaA [Vibrio cholerae HC-50A1]
gi|424627913|ref|ZP_18066240.1| inner membrane protein oxaA [Vibrio cholerae HC-51A1]
gi|424631861|ref|ZP_18069999.1| inner membrane protein oxaA [Vibrio cholerae HC-52A1]
gi|424634950|ref|ZP_18072986.1| inner membrane protein oxaA [Vibrio cholerae HC-55A1]
gi|424638775|ref|ZP_18076687.1| inner membrane protein oxaA [Vibrio cholerae HC-56A1]
gi|424643225|ref|ZP_18081000.1| inner membrane protein oxaA [Vibrio cholerae HC-56A2]
gi|424647029|ref|ZP_18084723.1| inner membrane protein oxaA [Vibrio cholerae HC-57A1]
gi|424651156|ref|ZP_18088697.1| inner membrane protein oxaA [Vibrio cholerae HC-57A2]
gi|424655109|ref|ZP_18092426.1| inner membrane protein oxaA [Vibrio cholerae HC-81A2]
gi|440712070|ref|ZP_20892696.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 4260B]
gi|443502062|ref|ZP_21069071.1| inner membrane protein oxaA [Vibrio cholerae HC-64A1]
gi|443505961|ref|ZP_21072777.1| inner membrane protein oxaA [Vibrio cholerae HC-65A1]
gi|443509799|ref|ZP_21076490.1| inner membrane protein oxaA [Vibrio cholerae HC-67A1]
gi|443513639|ref|ZP_21080201.1| inner membrane protein oxaA [Vibrio cholerae HC-68A1]
gi|443517447|ref|ZP_21083890.1| inner membrane protein oxaA [Vibrio cholerae HC-71A1]
gi|443522033|ref|ZP_21088300.1| inner membrane protein oxaA [Vibrio cholerae HC-72A2]
gi|443525901|ref|ZP_21092008.1| inner membrane protein oxaA [Vibrio cholerae HC-78A1]
gi|443528967|ref|ZP_21094990.1| inner membrane protein oxaA [Vibrio cholerae HC-7A1]
gi|443536492|ref|ZP_21102354.1| inner membrane protein oxaA [Vibrio cholerae HC-80A1]
gi|443536530|ref|ZP_21102390.1| inner membrane protein oxaA [Vibrio cholerae HC-81A1]
gi|449054680|ref|ZP_21733348.1| Inner membrane protein translocase component YidC [Vibrio cholerae
O1 str. Inaba G4222]
gi|38503195|sp|Q9KVY4.1|YIDC_VIBCH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|172047497|sp|A5F484.1|YIDC_VIBC3 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|254778170|sp|C3LP77.1|YIDC_VIBCM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395]
gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2]
gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395]
gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236]
gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10]
gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757]
gi|340044214|gb|EGR05167.1| inner membrane protein oxaA [Vibrio cholerae HE39]
gi|340046011|gb|EGR06946.1| inner membrane protein oxaA [Vibrio cholerae HCUF01]
gi|340046197|gb|EGR07128.1| inner membrane protein oxaA [Vibrio cholerae HC-49A2]
gi|341627209|gb|EGS52533.1| inner membrane protein oxaA [Vibrio cholerae HC-70A1]
gi|341628613|gb|EGS53838.1| inner membrane protein oxaA [Vibrio cholerae HC-48A1]
gi|341628899|gb|EGS54087.1| inner membrane protein oxaA [Vibrio cholerae HC-40A1]
gi|341642097|gb|EGS66584.1| inner membrane protein oxaA [Vibrio cholerae HC-02A1]
gi|341642172|gb|EGS66657.1| inner membrane protein oxaA [Vibrio cholerae HFU-02]
gi|341649404|gb|EGS73381.1| inner membrane protein oxaA [Vibrio cholerae HC-38A1]
gi|356423350|gb|EHH76802.1| inner membrane protein oxaA [Vibrio cholerae HC-06A1]
gi|356424006|gb|EHH77428.1| inner membrane protein oxaA [Vibrio cholerae HC-21A1]
gi|356428047|gb|EHH81277.1| inner membrane protein oxaA [Vibrio cholerae HC-19A1]
gi|356428732|gb|EHH81953.1| inner membrane protein oxaA [Vibrio cholerae HC-23A1]
gi|356436199|gb|EHH89319.1| inner membrane protein oxaA [Vibrio cholerae HC-22A1]
gi|356439148|gb|EHH92137.1| inner membrane protein oxaA [Vibrio cholerae HC-28A1]
gi|356446870|gb|EHH99661.1| inner membrane protein oxaA [Vibrio cholerae HC-32A1]
gi|356448862|gb|EHI01623.1| inner membrane protein oxaA [Vibrio cholerae HC-43A1]
gi|356450806|gb|EHI03516.1| inner membrane protein oxaA [Vibrio cholerae HC-61A1]
gi|356451432|gb|EHI04117.1| inner membrane protein oxaA [Vibrio cholerae HC-33A2]
gi|356456882|gb|EHI09459.1| inner membrane protein oxaA [Vibrio cholerae HC-48B2]
gi|356647925|gb|AET27980.1| conserved hypothetical protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793421|gb|AFC56892.1| membrane protein insertase [Vibrio cholerae IEC224]
gi|395924223|gb|EJH35029.1| inner membrane protein oxaA [Vibrio cholerae CP1032(5)]
gi|395925444|gb|EJH36242.1| inner membrane protein oxaA [Vibrio cholerae CP1041(14)]
gi|395926560|gb|EJH37338.1| inner membrane protein oxaA [Vibrio cholerae CP1038(11)]
gi|395936036|gb|EJH46766.1| inner membrane protein oxaA [Vibrio cholerae CP1042(15)]
gi|395936412|gb|EJH47136.1| inner membrane protein oxaA [Vibrio cholerae CP1046(19)]
gi|395938292|gb|EJH48986.1| inner membrane protein oxaA [Vibrio cholerae CP1048(21)]
gi|395948283|gb|EJH58934.1| inner membrane protein oxaA [Vibrio cholerae HC-20A2]
gi|395948875|gb|EJH59510.1| inner membrane protein oxaA [Vibrio cholerae HC-46A1]
gi|395957079|gb|EJH67664.1| inner membrane protein oxaA [Vibrio cholerae HE-25]
gi|395965473|gb|EJH75642.1| inner membrane protein oxaA [Vibrio cholerae HC-56A2]
gi|395965622|gb|EJH75785.1| inner membrane protein oxaA [Vibrio cholerae HC-57A2]
gi|395967929|gb|EJH77953.1| inner membrane protein oxaA [Vibrio cholerae HC-42A1]
gi|395977676|gb|EJH87080.1| inner membrane protein oxaA [Vibrio cholerae HC-47A1]
gi|395979787|gb|EJH89112.1| inner membrane protein oxaA [Vibrio cholerae CP1030(3)]
gi|395980191|gb|EJH89480.1| inner membrane protein oxaA [Vibrio cholerae CP1047(20)]
gi|408011488|gb|EKG49298.1| inner membrane protein oxaA [Vibrio cholerae HC-39A1]
gi|408017771|gb|EKG55253.1| inner membrane protein oxaA [Vibrio cholerae HC-50A1]
gi|408018668|gb|EKG56101.1| inner membrane protein oxaA [Vibrio cholerae HC-41A1]
gi|408023486|gb|EKG60648.1| inner membrane protein oxaA [Vibrio cholerae HC-52A1]
gi|408028488|gb|EKG65378.1| inner membrane protein oxaA [Vibrio cholerae HC-56A1]
gi|408028747|gb|EKG65609.1| inner membrane protein oxaA [Vibrio cholerae HC-55A1]
gi|408038743|gb|EKG75070.1| inner membrane protein oxaA [Vibrio cholerae HC-57A1]
gi|408038990|gb|EKG75299.1| inner membrane protein oxaA [Vibrio cholerae CP1040(13)]
gi|408046104|gb|EKG81820.1| inner membrane protein oxaA [Vibrio Cholerae CP1044(17)]
gi|408047875|gb|EKG83372.1| inner membrane protein oxaA [Vibrio cholerae CP1050(23)]
gi|408058358|gb|EKG93161.1| inner membrane protein oxaA [Vibrio cholerae HC-81A2]
gi|408060077|gb|EKG94792.1| inner membrane protein oxaA [Vibrio cholerae HC-51A1]
gi|408613010|gb|EKK86341.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1033(6)]
gi|408624720|gb|EKK97658.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-1A2]
gi|408629181|gb|EKL01890.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-17A1]
gi|408637474|gb|EKL09522.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-55C2]
gi|408645357|gb|EKL17012.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-60A1]
gi|408646456|gb|EKL18056.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-59A1]
gi|408652829|gb|EKL24020.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-61A2]
gi|408654862|gb|EKL25989.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-40]
gi|408661052|gb|EKL32046.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-77A1]
gi|408661808|gb|EKL32787.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-62A1]
gi|408662841|gb|EKL33746.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-46]
gi|408843791|gb|EKL83941.1| inner membrane protein oxaA [Vibrio cholerae HC-37A1]
gi|408850918|gb|EKL90859.1| inner membrane protein oxaA [Vibrio cholerae HC-17A2]
gi|408855747|gb|EKL95443.1| inner membrane protein oxaA [Vibrio cholerae HC-02C1]
gi|408863166|gb|EKM02658.1| inner membrane protein oxaA [Vibrio cholerae HC-55B2]
gi|408871774|gb|EKM11002.1| inner membrane protein oxaA [Vibrio cholerae HC-59B1]
gi|408876563|gb|EKM15676.1| inner membrane protein oxaA [Vibrio cholerae HC-62B1]
gi|408882521|gb|EKM21336.1| inner membrane protein oxaA [Vibrio cholerae HC-69A1]
gi|439972315|gb|ELP48610.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 4260B]
gi|443433545|gb|ELS76046.1| inner membrane protein oxaA [Vibrio cholerae HC-64A1]
gi|443437374|gb|ELS83465.1| inner membrane protein oxaA [Vibrio cholerae HC-65A1]
gi|443441214|gb|ELS90876.1| inner membrane protein oxaA [Vibrio cholerae HC-67A1]
gi|443445030|gb|ELS98281.1| inner membrane protein oxaA [Vibrio cholerae HC-68A1]
gi|443448864|gb|ELT05473.1| inner membrane protein oxaA [Vibrio cholerae HC-71A1]
gi|443451926|gb|ELT12163.1| inner membrane protein oxaA [Vibrio cholerae HC-72A2]
gi|443455709|gb|ELT19469.1| inner membrane protein oxaA [Vibrio cholerae HC-78A1]
gi|443460230|gb|ELT27618.1| inner membrane protein oxaA [Vibrio cholerae HC-7A1]
gi|443460347|gb|ELT31436.1| inner membrane protein oxaA [Vibrio cholerae HC-80A1]
gi|443467777|gb|ELT42431.1| inner membrane protein oxaA [Vibrio cholerae HC-81A1]
gi|448265826|gb|EMB03059.1| Inner membrane protein translocase component YidC [Vibrio cholerae
O1 str. Inaba G4222]
Length = 541
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|312144701|ref|YP_003996147.1| YidC/Oxa1 family membrane protein insertase [Halanaerobium
hydrogeniformans]
gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium
hydrogeniformans]
Length = 216
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AI++ T+I+K+ +PLT KQ S MQ +QP++K IQ +Y ++E+ Q E +LY
Sbjct: 22 NYGLAIVIFTLIIKIVLYPLTAKQTRSMREMQEIQPEMKKIQNKYEDDKEKQQEEMMKLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
+ GVNP AGC P + + + I LY+ + + ++ + E F WI +++
Sbjct: 82 KDHGVNPAAGCFPMIVQMAILIPLYRTIFTLGDQ-MANEAFLWIGTIT 128
>gi|384423365|ref|YP_005632723.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae LMA3984-4]
gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae LMA3984-4]
Length = 541
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|423101134|ref|ZP_17088838.1| stage III sporulation protein J [Listeria innocua ATCC 33091]
gi|370792249|gb|EHN60126.1| stage III sporulation protein J [Listeria innocua ATCC 33091]
Length = 287
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + +V+ D +Y
Sbjct: 13 IASLVIGLVAVLSGCGYSTDPITSESTGFWSHYIVFPLSWVITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
Length = 510
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 298 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 351
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 352 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 409
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 410 SVELRHSPFFGWIHDLSA 427
>gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
DSM 43183]
gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
DSM 43183]
Length = 351
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYS---YGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F ++ E + + + ++ G+ + P S + +IILLTV +++ FPL KQ+ ++ M
Sbjct: 2 FDWLYEIVAWFIVLIHKGLGTIVDPDSGLAWAGSIILLTVFLRLLMFPLFVKQIHASRKM 61
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q L P+I+A++++Y +++R+ E R+Y++ G NPLAGCLP L +PV+IGL+Q L+ +
Sbjct: 62 QELSPQIQALRKKYKHDKQRLNQEVMRVYQENGANPLAGCLPLLVQMPVFIGLFQVLNGI 121
Query: 221 --ANEG 224
A EG
Sbjct: 122 SKAKEG 127
>gi|337293464|emb|CCB91453.1| Inner membrane protein oxaA [Waddlia chondrophila 2032/99]
Length = 822
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 24/198 (12%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+Q GWF FIS L +L H+ S+G +IILLT+ ++V +PL +
Sbjct: 563 GSQTFHGWFSFISAPFSKFLFVLMKFFH--HLTGSWGISIILLTIALRVMLYPLNAWSTK 620
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S L MQ LQP+++AIQ+++ + ++ QLE + LY GVNP++GC P L +P IG++
Sbjct: 621 SMLKMQQLQPEVQAIQEKHKKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFD 680
Query: 216 ALSNVANEGLLTEGFF--WIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAY 272
L + L F WI +L+ P + SW P F G+ +
Sbjct: 681 LLKSTFE--LRGAPFIPGWIDNLAAPDVL--------FSWKTPIFFIGN---------QF 721
Query: 273 LVLPVLLVVSQYASMELM 290
+LP+LL V + M
Sbjct: 722 HLLPILLGVVMFIQQRTM 739
>gi|406920071|gb|EKD58200.1| hypothetical protein ACD_57C00004G0010 [uncultured bacterium]
Length = 274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 76/117 (64%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
F++ + +L L ++A+++P + GFAIILLTVIV++ +PLT Q++S+ M L+P
Sbjct: 7 FLTTPILNLLVALYKALNAIYLPGALGFAIILLTVIVRMILWPLTTSQLKSSQKMAALKP 66
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
+ I+ + ++ R Q E ++LY++ GVNPLAGCLP L IPV+I LY L +
Sbjct: 67 HLDRIKAEHGHDKVRHQQEVNKLYKEHGVNPLAGCLPLLLQIPVFIALYNVLLKIVQ 123
>gi|319789453|ref|YP_004151086.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio
ammonificans HB-1]
gi|317113955|gb|ADU96445.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio
ammonificans HB-1]
Length = 490
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 102 GWFGFISE-AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
G FGF+++ ++F L + K VP ++G IIL +I+K+ PL K S M
Sbjct: 285 GIFGFLAKPLLKFFLFLHK------FVP-NWGLDIILFVLIIKILLHPLAHKSYVSMKKM 337
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q L PK++ +++RY + +++Q ET +LY++ GVNP +GCLP L IP++ LY+ N
Sbjct: 338 QELAPKLEELKKRYGNDPQKLQEETMKLYQEMGVNPASGCLPMLLQIPIFFALYEIFLNA 397
Query: 221 ANEGLLTEGFFWIPSLSGP 239
L F WIP LS P
Sbjct: 398 VE--LKGASFLWIPDLSQP 414
>gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia
chondrophila WSU 86-1044]
gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia
chondrophila WSU 86-1044]
Length = 822
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 24/198 (12%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+Q GWF FIS L +L H+ S+G +IILLT+ ++V +PL +
Sbjct: 563 GSQTFHGWFSFISAPFSKFLFVLMKFFH--HLTGSWGISIILLTIALRVMLYPLNAWSTK 620
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S L MQ LQP+++AIQ+++ + ++ QLE + LY GVNP++GC P L +P IG++
Sbjct: 621 SMLKMQQLQPEVQAIQEKHKKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFD 680
Query: 216 ALSNVANEGLLTEGFF--WIPSLSGPTTIAARQSGSGISWLLP-FVDGHPPLGWHDTAAY 272
L + L F WI +L+ P + SW P F G+ +
Sbjct: 681 LLKSTFE--LRGAPFIPGWIDNLAAPDVL--------FSWKTPIFFIGN---------QF 721
Query: 273 LVLPVLLVVSQYASMELM 290
+LP+LL V + M
Sbjct: 722 HLLPILLGVVMFIQQRTM 739
>gi|330835990|ref|YP_004410631.1| membrane protein OxaA [Sphaerochaeta coccoides DSM 17374]
gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Sphaerochaeta coccoides DSM 17374]
Length = 604
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 40/196 (20%)
Query: 103 WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQN 162
W G++ ++ VL++ I +YG AIILLT++ +V PL KK + ST M
Sbjct: 355 WLGWLETILKGVLQLFYKVIP------NYGVAIILLTLLTRVLMHPLNKKSMASTARMSA 408
Query: 163 LQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
L P++ ++++YA N +++ T+ LYR+ +NPL GCLP L P+ I LY
Sbjct: 409 LSPQMDELRKKYADNPQKLNEATAALYRKEKINPLGGCLPMLLQFPIMIALY-------- 460
Query: 223 EGLLTEGFF---------WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL 273
GLL + F WIP LS P T+ S+ LPF+ H
Sbjct: 461 -GLLNKHFELRGAMFIPGWIPDLSVPDTVLT------FSFNLPFLGNQ----LH------ 503
Query: 274 VLPVLLVVSQYASMEL 289
+LP+L S SM+L
Sbjct: 504 ILPILYATSMIFSMKL 519
>gi|408679377|ref|YP_006879204.1| Inner membrane protein translocase component YidC, long form
[Streptomyces venezuelae ATCC 10712]
gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form
[Streptomyces venezuelae ATCC 10712]
Length = 441
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L V++++ PL KQ++ST M
Sbjct: 8 FSFITTPVSWVIVQFHKVYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LS++
Sbjct: 68 QALQPKMKAIQERYKSDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSSI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|122282297|sp|Q04W30.1|YIDC_LEPBJ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|122282754|sp|Q04XE2.1|YIDC_LEPBL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 622
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ ES MQ L P++K I +++A + + Q +T LY
Sbjct: 417 NYGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 476
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 477 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 527
>gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris BisB18]
gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris
BisB18]
Length = 632
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L H+ ++G AI+L+TVI+K+ PL K S M+
Sbjct: 380 GWFYFITKPMFVALDFF------FHLVGNFGIAILLVTVIIKLLFLPLANKSYASMAKMK 433
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A+++R+ ++ + Q E +YR+ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 434 AIQPQLAALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VT 492
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---PVL 278
E + WI LS P + + LL F H P+ H YLVL P++
Sbjct: 493 IEMRHAPFYGWIHDLSAPDPT----NLFNLFGLLAFDPTHVPVIGH----YLVLGAWPIV 544
Query: 279 LVVSQYASMELMKPP 293
+ ++ + M+L P
Sbjct: 545 MGITMWVQMKLNPTP 559
>gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM
2379]
gi|166975879|sp|A1AV44.1|YIDC_PELPD RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379]
Length = 542
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 22/195 (11%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + LK + +YG AII++T+I+K FPLT K +S MQ
Sbjct: 326 GWFTVIAKPLLYTLKYFYRYVG------NYGVAIIIITIILKALFFPLTHKSYKSMKDMQ 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP + A++++Y ++E + LYR VNPL GCLP L IPV+ LY+AL +
Sbjct: 380 KIQPMMAALKEKYKDDREGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALM-FS 438
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E +FWI LSGP + + G LPFV G P L++ + +
Sbjct: 439 IELRHAPFYFWITDLSGPDNLFGQMLG------LPFVIGPLP---------LLMGATMFI 483
Query: 282 SQYASMELMKPPQAR 296
Q + M P QA+
Sbjct: 484 QQKMTPSTMDPMQAK 498
>gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|254772748|sp|B2IDV5.1|YIDC_BEII9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 604
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 16/194 (8%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+F FI+ M ++L + V ++G AI+ +TV+VK FPL + S M+
Sbjct: 356 GYFYFITRPMFWILHTI------YQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMK 409
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A+++RYA ++ + Q E LY++ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 410 AIQPQMLALRERYADDKVKQQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLF-VT 468
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E F WI LS PT I + LLPF H P+ H A + P+++
Sbjct: 469 IEMRQAPFFGWIRDLSAPDPTNIF------NLFGLLPFDPTHLPMIGH-FLAIGIWPLIM 521
Query: 280 VVSQYASMELMKPP 293
VS + M++ P
Sbjct: 522 GVSMFFQMKMNPEP 535
>gi|421095104|ref|ZP_15555817.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200801926]
gi|410361814|gb|EKP12854.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200801926]
gi|456888373|gb|EMF99356.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200701203]
Length = 622
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ ES MQ L P++K I +++A + + Q +T LY
Sbjct: 417 NYGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 476
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 477 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 527
>gi|357419552|ref|YP_004932544.1| YidC/Oxa1 family membrane protein insertase [Thermovirga lienii DSM
17291]
gi|355397018|gb|AER66447.1| membrane protein insertase, YidC/Oxa1 family [Thermovirga lienii
DSM 17291]
Length = 260
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+SYG AII+LT++V+V +PL+ KQ+ S MQ LQP++K +Q++Y ++E + E RL
Sbjct: 24 HSYGLAIIILTLLVRVLLYPLSHKQMVSMQKMQKLQPRLKVLQEKYKDDKETLNKEIMRL 83
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG------PTTI 242
Y++ VNP AGCLP L +P+ I L++ L N+ G G SL G + +
Sbjct: 84 YKENNVNPAAGCLPLLVQLPILILLFRVLMNLDLGGATFLGI----SLEGSVLSTMASAV 139
Query: 243 AARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
A GI L + +P G + YL VLL+V
Sbjct: 140 GASADKIGIGALFSAIAANPA-GLLNVQMYLGNLVLLLV 177
>gi|156741411|ref|YP_001431540.1| hypothetical protein Rcas_1427 [Roseiflexus castenholzii DSM 13941]
gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii
DSM 13941]
Length = 345
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 24/177 (13%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S G AIIL T++ ++ PLT K ++S+ MQ LQP +K +Q++Y + +++Q ET RLY
Sbjct: 24 SAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPHMKELQRKYGKDPQKLQEETMRLY 83
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNV--------ANEGLL----TEGFFWIPSLS 237
R+ VNP+ GCLP L +P+++G+YQA+ N+ A +L +G + S +
Sbjct: 84 REYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAEHAGSAMLRVLNEQGIAF--STA 141
Query: 238 GPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQ 294
T+ Q WL P LG T Y +LP+L V+ Q ++LM P+
Sbjct: 142 TTATLGQPQLAGSFLWL-------PDLG--KTDPYYILPILSVIFQLI-VQLMATPR 188
>gi|418738410|ref|ZP_13294805.1| 60Kd inner membrane protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410745903|gb|EKQ98811.1| 60Kd inner membrane protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 622
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ ES MQ L P++K I +++A + + Q +T LY
Sbjct: 417 NYGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 476
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 477 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 527
>gi|397677337|ref|YP_006518875.1| membrane protein OxaA [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|395398026|gb|AFN57353.1| Membrane protein oxaA [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 579
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY + R++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDDARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E WI LS P
Sbjct: 448 VTIESRHQPFILWIKDLSAP 467
>gi|449144918|ref|ZP_21775729.1| putative Inner membrane protein [Vibrio mimicus CAIM 602]
gi|449079438|gb|EMB50361.1| putative Inner membrane protein [Vibrio mimicus CAIM 602]
Length = 541
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
Y412MC10]
gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
Y412MC10]
gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
Length = 296
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 66 RTESLLYTLADAAVSLDSASGGAASTSADGATQKNGG-WFGFISEAMEFVLKILKDGIDA 124
R + L T AV++ S A + KNGG W + + L +
Sbjct: 8 RGKWFLLTAVILAVAVISGCAPGADQTRTIEDLKNGGFWQSNVVYYFTWALDTFATWFNG 67
Query: 125 VHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLE 184
YG +++++ +IV+ PLT KQV S+ AMQ +QP+I+ I+++Y E++Q+E
Sbjct: 68 -----EYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKVQME 122
Query: 185 TSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
T +L+++ VNP+AGCLP + +P++I LY ++ N L F W+
Sbjct: 123 TMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIY--YNNLLRDHEFLWL 169
>gi|312113264|ref|YP_004010860.1| YidC/Oxa1 family membrane protein insertase [Rhodomicrobium
vannielii ATCC 17100]
gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium
vannielii ATCC 17100]
Length = 711
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + F+L L +HV ++G AI+L TV+VKV FPL K + ++
Sbjct: 364 GWFPFLTQPLYFLLNWL-----YLHVG-NFGIAILLTTVLVKVLFFPLANKSYSAMNKLK 417
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP++K IQ+R+ +++R Q LY++ VNP AGCLP L IPV+ LY+ L V+
Sbjct: 418 MLQPEMKKIQERFKDDKQRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLL-VS 476
Query: 222 NEGLLTEGFFWIPSLSGP 239
E + WI LS P
Sbjct: 477 IEMRHAPFYGWIHDLSAP 494
>gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
Length = 521
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 21/167 (12%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +IIL+T+++KV FPLTKK EST MQ +QPKI+ +Q +Y G +++ E ++LY
Sbjct: 312 NWGVSIILVTILIKVIFFPLTKKSSESTQQMQKMQPKIQELQAKYKGKPQKLNEEMAKLY 371
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLSGPTTIAARQ 246
++AG NPL+GCLP L +P+ +Y+ +N F WIP LS +I
Sbjct: 372 KEAGYNPLSGCLPLLIQLPILFAMYRLFNNYFE---FRGAMFIPHWIPDLSVGDSI---- 424
Query: 247 SGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
L F P LGW D +LP++ V+SQ ++ + P
Sbjct: 425 --------LQFPSPIPFLGWTDLR---ILPIVYVISQMVFGKITQTP 460
>gi|253573861|ref|ZP_04851203.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846338|gb|EES74344.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 280
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 33/210 (15%)
Query: 89 ASTSADGATQKNGGWF-GFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A+T+AD T NG W+ + L + + +YG AI+++ +IV+
Sbjct: 16 ATTTADMRT--NGSWWTSNVVYYFSLALDTFAEWFNG-----AYGIAILIMVLIVRTLIL 68
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATI 207
PLT KQV+S+ AMQ +QP+++ I+++Y N E+ Q ET +L+++ VNP+AGC P L +
Sbjct: 69 PLTLKQVKSSKAMQAIQPQLQKIREQYKDNPEKQQQETMKLFQEHKVNPMAGCFPLLIQM 128
Query: 208 PVWIGLYQALSNVANEGLLTEGFFW-----------IPSLSGPTTIAARQSGSGISWLLP 256
PV+I LY ++ N + F W +P+++ TT + S ++
Sbjct: 129 PVFIALYNSI--YYNSAIREHSFLWLQLGEPDKLFILPAIAAITTFIQTKMMSSMN---- 182
Query: 257 FVDGHPPLGWHDTAAYL--VLPVLLVVSQY 284
P G A++ V P+L+ V Y
Sbjct: 183 ------PQGMQGPMAFMMWVYPILIFVMAY 206
>gi|418720317|ref|ZP_13279515.1| 60Kd inner membrane protein [Leptospira borgpetersenii str. UI
09149]
gi|410743295|gb|EKQ92038.1| 60Kd inner membrane protein [Leptospira borgpetersenii str. UI
09149]
Length = 622
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ ES MQ L P++K I +++A + + Q +T LY
Sbjct: 417 NYGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 476
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 477 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 527
>gi|352080699|ref|ZP_08951638.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Rhodanobacter sp. 2APBS1]
gi|351683980|gb|EHA67056.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Rhodanobacter sp. 2APBS1]
Length = 578
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 38 STRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGAT 97
S R + + P LS+ L S +S LY + ++D+ + G T
Sbjct: 311 SAHPRYLIRTVGPALSVAPGQSLTS-----QSRLYVGPNKQGTMDAIAPGLDLTI----- 360
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+ G F I+ M +VL V ++G AIILL +++K ++ LT Q S+
Sbjct: 361 --DYGMFKIIAVPMHWVLSQFH------AVTRNWGVAIILLVLLIKGLSWKLTAIQYRSS 412
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQP+++A+++RY +++++Q LY++ VNP+ GCLP L T+PV+ GLY L
Sbjct: 413 ARMRKLQPRVQALKERYGDDKQKMQTAMMELYKKEKVNPMGGCLPVLITLPVFYGLYFVL 472
Query: 218 SNVANEGLLTEGFFWIPSLSGPT-----TIAARQSGSGISWLLPFVDGHPPLGWHDTAAY 272
+ L F WIP LS P I G WL P G P T A
Sbjct: 473 MDSLE--LRHAAFLWIPDLSAPDPFYILPIIYALVMLGTQWLNPVAAGMDP-----TQAK 525
Query: 273 L--VLPVLLVV 281
+ V+P+L V
Sbjct: 526 MMKVMPLLFTV 536
>gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 540
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query: 89 ASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFP 148
A+T+ + + GW FI+ + +L + + ++G AI++LT IV+ A +P
Sbjct: 314 AATAKNLNLTVDYGWLWFIASPLHKLLSFIHSIVG------NWGVAIMVLTFIVRGAMYP 367
Query: 149 LTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIP 208
LTK Q S M+ LQPK++A+++R+ +++R+ E LYR+ VNPL GCLP L +P
Sbjct: 368 LTKAQYTSMAKMRMLQPKLQAMRERFGDDRQRLSQEMMELYRKEKVNPLGGCLPILVQMP 427
Query: 209 VWIGLYQALSNVANEGLLTEGFF-WIPSLSG 238
++I LY AL + + L FF WI LS
Sbjct: 428 IFIALYWAL--MESVELRHAPFFGWIHDLSA 456
>gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW]
gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 602
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + L +L + ++G AI++ TV++++A FPL KQ ++ M+
Sbjct: 369 GWFYFLTKPFFYGLDLLGQALG------NFGIAILVFTVLLRLAFFPLANKQYKAFAKMK 422
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++++ + T LY+Q VNPL+GCLP L IPV+ LY+ L V
Sbjct: 423 LLQPKMEELRKRHGDDRQKLSMATMELYKQEKVNPLSGCLPILLQIPVFFALYKVLF-VT 481
Query: 222 NEGLLTEGFFWIPSLSGP 239
E + WI LS P
Sbjct: 482 IEMRHAPFYGWITDLSAP 499
>gi|392427888|ref|YP_006468882.1| preprotein translocase subunit YidC [Desulfosporosinus acidiphilus
SJ4]
gi|391357851|gb|AFM43550.1| preprotein translocase subunit YidC [Desulfosporosinus acidiphilus
SJ4]
Length = 224
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 107 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPK 166
I + M ++L I + A+ +P +YG AIILLT+++K +PLT KQ+ S +LQPK
Sbjct: 4 IVQWMTYLLNIFYNLSSALGLP-NYGVAIILLTILIKTIIYPLTYKQMASMRKTVDLQPK 62
Query: 167 IKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
IKAIQ ++ ++E+ E LY++ VNP+ GCLP + +P++ GLY L N
Sbjct: 63 IKAIQAKHKNDKEKANAEIMELYKEHQVNPMGGCLPIVIQLPIFWGLYSTLRN 115
>gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
V453]
gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
V453]
Length = 296
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 66 RTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAV 125
R + L T AV++ S A + KNGG F + + + D A
Sbjct: 8 RGKWFLLTAVILAVAVISGCAPGADQTRTIEDLKNGG---FWQSNVVYYFTLALDTF-AT 63
Query: 126 HVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLET 185
YG +++++ +IV+ PLT KQV S+ AMQ +QP+I+ I+++Y E++Q+ET
Sbjct: 64 WFNGEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKVQMET 123
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+L+++ VNP+AGCLP + +P++I LY ++ N L F W+
Sbjct: 124 MKLFQENKVNPMAGCLPLIVQMPIFIALYHSIY--YNNLLRDHEFLWL 169
>gi|297618524|ref|YP_003703683.1| YidC/Oxa1 family membrane protein insertase [Syntrophothermus
lipocalidus DSM 12680]
gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus
lipocalidus DSM 12680]
Length = 259
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
A+ +P +YGFAIIL+T+ +K+ +PLT KQ++S MQ LQP++K +Q+RY + +R+Q
Sbjct: 22 AIGLP-NYGFAIILVTIAIKLLLYPLTHKQMKSMRKMQELQPRLKLLQERYKEDPQRMQK 80
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
E LY++ GV+PL+GCLP L +P+ + Y+AL + F W+P+LS P
Sbjct: 81 EVFDLYKEHGVSPLSGCLPLLIQLPILVAFYRALYQLKYTVPAHAAFLWVPTLSKP 136
>gi|410610864|ref|ZP_11321969.1| inner membrane protein oxaA [Glaciecola psychrophila 170]
gi|410169575|dbj|GAC35858.1| inner membrane protein oxaA [Glaciecola psychrophila 170]
Length = 544
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GFAIIL+T++VK A +PLTKKQ ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 354 NWGFAIILITIVVKGAMYPLTKKQYESMAKMRALKPKMDALKERYGDDKQKMQKAMMEMY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 414 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLSA 461
>gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
gi|424810934|ref|ZP_18236268.1| inner membrane protein, 60 kDa [Vibrio mimicus SX-4]
gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
gi|342321945|gb|EGU17741.1| inner membrane protein, 60 kDa [Vibrio mimicus SX-4]
Length = 541
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|392310440|ref|ZP_10272974.1| preprotein translocase subunit YidC [Pseudoalteromonas citrea NCIMB
1889]
Length = 546
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++G AII +T++VK A +PLTK Q S M+
Sbjct: 332 GWLFFISQPLFILLKFLYGLIG------NWGLAIIAITILVKSALYPLTKAQYTSMAKMR 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++RY ++++ T LYR+ VNP+ GCLP L +P+++ L+ +
Sbjct: 386 MLQPKMQALKERYGDDRQKFGQATMELYRKEKVNPMGGCLPLLLQMPIFLALFYVFLE-S 444
Query: 222 NEGLLTEGFFWIPSLSG 238
E E FW+ LS
Sbjct: 445 TELRHAEFMFWLTDLSA 461
>gi|302870728|ref|YP_003839365.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
aurantiaca ATCC 27029]
gi|315506965|ref|YP_004085852.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp.
L5]
gi|302573587|gb|ADL49789.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
aurantiaca ATCC 27029]
gi|315413584|gb|ADU11701.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp.
L5]
Length = 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L DA+ VP +++ AI+ L V V+V FP+ KQ++S
Sbjct: 6 WIYYAISWILLTWHSAWDAIGVPVGAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQ 65
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQPK+K +Q+++ G++E +Q E LYR+ NPL GCLP IPV++GL+ L
Sbjct: 66 RAMQALQPKVKELQEKHKGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHTL 125
Query: 218 SNVA--NEGLLTEGF 230
++ N+G G+
Sbjct: 126 RRLSPDNQGKTLYGW 140
>gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
Length = 541
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
Length = 541
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
Length = 541
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC
[Campylobacter hominis ATCC BAA-381]
gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381]
Length = 532
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FIS+ M LK L + ++G+AI+++T+IV+ +PL+ K + S M+
Sbjct: 312 GWFTFISKPMFGFLKWLHNYTG------NWGWAIVIMTLIVRAILYPLSYKGMLSMNKMK 365
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +Q RY G+ +++Q LY++ VNP+ GCLP L +P++ +Y+ L N A
Sbjct: 366 DLAPKMKELQARYKGDPKKLQTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLN-A 424
Query: 222 NEGLLTEGFFWIPSLS 237
E E FWI LS
Sbjct: 425 IELKGAEWAFWIHDLS 440
>gi|374605468|ref|ZP_09678395.1| hypothetical protein PDENDC454_20842 [Paenibacillus dendritiformis
C454]
gi|374388919|gb|EHQ60314.1| hypothetical protein PDENDC454_20842 [Paenibacillus dendritiformis
C454]
Length = 257
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
YG AI+LLT+IV+ PLT KQ+ S+ MQ LQPK+ ++++Y N ++ Q ET +L+
Sbjct: 68 EYGLAILLLTIIVRSLILPLTVKQMRSSKEMQKLQPKLAELKKKYGDNPQKQQEETMKLF 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+Q VNPLAGCLP + +PV+I LY ++ N + F W+
Sbjct: 128 QQHNVNPLAGCLPMIVQMPVFIALYNSI--YLNSEIREHTFLWL 169
>gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
Length = 539
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHWLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
Length = 541
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHSPFFGWIHDLSA 458
>gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22]
gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22]
Length = 421
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ AV P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHTVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANEGLL 226
AN +
Sbjct: 128 ANNDTI 133
>gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 609
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ M L L I ++G AI+ +TV++K+ FPL K +S M+
Sbjct: 364 GWFYFITRPMFHALDWLYSVIG------NFGVAILAVTVVLKLIFFPLANKSYKSMARMK 417
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
N+QPKI +++R+ ++++ Q E R+YR+ +NP AGC P L IPV+ LY+ L V
Sbjct: 418 NMQPKIMEMRERFKDDKQKQQQEMMRIYREEKINPAAGCWPILIQIPVFFALYKVLY-VT 476
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI L+ P
Sbjct: 477 IEMRHAPFFGWIQDLAAP 494
>gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC
[Sphingomonas wittichii RW1]
gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1]
Length = 577
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 128/289 (44%), Gaps = 48/289 (16%)
Query: 32 PNRRLASTRVRLSFQEIPPILSL--DSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAA 89
P R AST L F + + +L DS +++ F T +Y ++ +L A G A
Sbjct: 244 PGIRFASTGGWLGFGDKYWLTALVPDSKASVDAGFLSTAPQVYQAVESGRALVIAPGQAG 303
Query: 90 STSA------------DGATQKNG----------GWFGFISEAMEFVLKILKDGIDAVHV 127
S S D G GWF + + + +VL +
Sbjct: 304 SVSQRFFAGAKEVALLDRYENDQGVPLFSRAIDWGWFRVLEKPIFWVLD------QVFKL 357
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
++G AII+LT +V+ FP+ +KQ S M+ +QPK+K +Q+R ++ R+Q E +
Sbjct: 358 VGNFGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKPRLQQELLK 417
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY++ VNPLAGCLP L IPV+ LY+ L V E WI LS P +
Sbjct: 418 LYQEEKVNPLAGCLPILVQIPVFYALYKVLM-VTIEMRHQPFVLWIRDLSAPDPLHVLN- 475
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYL---VLPVLLVVSQYASMELMKPP 293
L +D PP A+L VL +LL VS + +L P
Sbjct: 476 ------LFGLLDFTPP-------AFLGIGVLALLLGVSMWLQFKLNPQP 511
>gi|312897432|ref|ZP_07756856.1| putative OxaA-like protein [Megasphaera micronuciformis F0359]
gi|310621493|gb|EFQ05029.1| putative OxaA-like protein [Megasphaera micronuciformis F0359]
Length = 217
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII+LT+I+K+ PLT KQ+ S MQ LQPKIK +Q++Y GNQ+++Q E S+LY
Sbjct: 26 SYGIAIIMLTIIIKLVLSPLTAKQIRSMEGMQLLQPKIKELQKKYKGNQKKMQEEMSKLY 85
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
R+ GVNPL+GCLP L +P + ++ AL + + E F W+ SL P
Sbjct: 86 REMGVNPLSGCLPILIQMPFLVSIFYALRSYPYDP-AYESFLWLSSLGQP 134
>gi|347731633|ref|ZP_08864725.1| 60Kd inner membrane family protein [Desulfovibrio sp. A2]
gi|347519583|gb|EGY26736.1| 60Kd inner membrane family protein [Desulfovibrio sp. A2]
Length = 536
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF I+ + +L + +YG AIILLTV++K+ +PL+ K +S
Sbjct: 323 NLGWFSIIARPLVDLLVFFNKYVG------NYGVAIILLTVVIKLVFWPLSHKSYKSMEQ 376
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP ++ +++++ ++E++ E RLY+ VNP GCLP L IPV+ GLYQAL N
Sbjct: 377 MKKLQPMLQKLREKHGDDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLN 436
>gi|424783443|ref|ZP_18210279.1| Inner membrane protein translocase component YidC, long form
[Campylobacter showae CSUNSWCD]
gi|421958674|gb|EKU10290.1| Inner membrane protein translocase component YidC, long form
[Campylobacter showae CSUNSWCD]
Length = 520
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L +L I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 306 GWFTFIAKPMFVFLNLLYSYIG------NWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLK 359
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +Q +Y G+ +++ + LY++ G NP+ GCLP L IP++ +Y+ L N A
Sbjct: 360 DLAPKVKELQAKYKGDPQKLNMHMMELYKKNGANPMGGCLPILMQIPIFFAIYRVLLN-A 418
Query: 222 NEGLLTEGFFWIPSLS 237
E WI LS
Sbjct: 419 IELKAAPWILWIHDLS 434
>gi|254384778|ref|ZP_05000115.1| inner membrane protein [Streptomyces sp. Mg1]
gi|194343660|gb|EDX24626.1| inner membrane protein [Streptomyces sp. Mg1]
Length = 367
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 101 GGWFGFISEAMEFVLKILKDGIDAV---HVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
G F FI+ + +V+ A+ +++G +I+ L +++++ PL KQ+++T
Sbjct: 5 AGLFSFITTPVSWVIVQFHSVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKAT 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
MQ LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L
Sbjct: 65 RGMQALQPKMKAIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVL 124
Query: 218 SNVAN 222
S +AN
Sbjct: 125 SAIAN 129
>gi|255028899|ref|ZP_05300850.1| SpoIIIJ protein [Listeria monocytogenes LO28]
Length = 160
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + + + D SY
Sbjct: 13 IASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGG-----SYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM NLQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
++ VNP+ GCLP L +P+ +G YQA+S A
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE 160
>gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC
[Sphingopyxis alaskensis RB2256]
gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis
RB2256]
Length = 584
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF F + +L L + + ++G AI+ LT+I+++ FP+ +Q S
Sbjct: 351 DWGWFEFFEVPIFKLLHWLFEKVG------NFGLAIMALTLIIRLLMFPIANRQFSSMAQ 404
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q+RY ++ R+Q E +LY+ +NPLAGCLP + IP++ LY+ L
Sbjct: 405 MRVVQPKMKALQERYKDDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLM- 463
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+A E WI LS P
Sbjct: 464 LAIEMRHQPFILWIKDLSAP 483
>gi|256827813|ref|YP_003151772.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM
15641]
gi|256583956|gb|ACU95090.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM
15641]
Length = 257
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+G AI+ +T+I ++ +PL +KQ++S+ MQ +QP +K IQ +YA +Q+R+Q E ++Y
Sbjct: 22 DWGMAIVTVTIIFRLLVYPLMQKQIKSSFQMQKVQPLLKEIQTKYADDQQRMQEEMQKIY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVA--NEGLLTEGFFWIPSLSGPTTIAARQS 247
+A NP+AGCLP +P++I L+Q L + +G + + +P L+ + A
Sbjct: 82 AEAKFNPIAGCLPIFLQMPIFIALFQVLQEMTTRTQGSTYQFYHLVPDLTLSPSSAF--- 138
Query: 248 GSGISWLLPFV 258
G G+ +P++
Sbjct: 139 GQGVLTFIPYI 149
>gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC
[Nitrobacter sp. Nb-311A]
gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC
[Nitrobacter sp. Nb-311A]
Length = 614
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF FI++ M L HV ++G AI+++TV++K+ FPL + S
Sbjct: 357 DWGWFYFITKPMFLALDFF------FHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAK 410
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QP+I A++++Y ++ ++Q E +Y++ +NP++GCLP L IPV+ LY+ L
Sbjct: 411 MKAVQPQITALKEQYPDDRMKLQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLF- 469
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E F WI LS P
Sbjct: 470 VTIEMRHAPFFAWIKDLSAP 489
>gi|402773364|ref|YP_006592901.1| Membrane protein OxaA [Methylocystis sp. SC2]
gi|401775384|emb|CCJ08250.1| Membrane protein OxaA [Methylocystis sp. SC2]
Length = 593
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 100 NGGWFGFISEAM----EFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+ GWF FI+ M +F+ K+L + +G AI+ +TVIVK+A PL K +
Sbjct: 346 DWGWFYFITRPMFRLIDFLYKLLGN----------FGLAILAVTVIVKLAFLPLANKSYQ 395
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S M+ +QP+IK ++++Y ++ + +E L+++ VNP +GCLP + IPV+ LY+
Sbjct: 396 SIAKMKAIQPRIKELKEKYGDDKHKFNMEQMELFKREKVNPASGCLPVIVQIPVFFSLYK 455
Query: 216 ALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL 275
L V E F WI LS P + +LPF H + YL L
Sbjct: 456 VLV-VTIEMRHAPFFGWIKDLSAPDPTNV----FNLFGVLPFDPTHVAI----FGPYLAL 506
Query: 276 ---PVLLVVSQYASMELMKPP 293
P+L+ VS + M++ P
Sbjct: 507 GVWPLLMGVSMWLQMKMNPEP 527
>gi|325107204|ref|YP_004268272.1| membrane protein oxaA [Planctomyces brasiliensis DSM 5305]
gi|324967472|gb|ADY58250.1| Membrane protein oxaA [Planctomyces brasiliensis DSM 5305]
Length = 680
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 105/196 (53%), Gaps = 25/196 (12%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWFG IS+ M L I+ + +++PY G AI++LTVIV+ A +P+++K + M+
Sbjct: 387 GWFGAISKLM---LAIMNFFHNTLYLPY--GLAIVMLTVIVRGAMYPISRKHALAAKKMK 441
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+I+ I+++Y ++E++ + +++G +GCLP L +P++IGLYQAL
Sbjct: 442 EMQPRIEEIRKKYENDKEKLAKAQMEIMKESGF--FSGCLPMLLQLPIFIGLYQAL--YV 497
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
+ L F WI +L+ P + + + LPF+ + +LP+L V
Sbjct: 498 SVDLRMAEFLWINNLAAPDRLFQ------MPFSLPFLGND----------FNLLPMLTVA 541
Query: 282 SQYASMELMKPPQARK 297
++ PP A +
Sbjct: 542 LFVMQQKMFAPPPANE 557
>gi|163791581|ref|ZP_02185983.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7]
gi|159873159|gb|EDP67261.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7]
Length = 275
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG II+ T+I+++ P+ Q +ST M LQP++K +Q +YA Q +++ ET
Sbjct: 58 SYGVGIIIFTLIIRLILLPVMHGQTKSTRKMAELQPQLKELQTKYASKDTDTQNKLKEET 117
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
S+LY +AGVNP+AGCLP L +PV I +YQA+S E L T F W+
Sbjct: 118 SKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISR--TEVLKTGNFLWM 163
>gi|328958800|ref|YP_004376186.1| OxaA-like protein [Carnobacterium sp. 17-4]
gi|328675124|gb|AEB31170.1| OxaA-like protein precursor [Carnobacterium sp. 17-4]
Length = 267
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG II+ T+I+++ P+ Q +ST M LQP++K +Q +YA Q +++ ET
Sbjct: 49 SYGVGIIVFTLIIRLILLPVMHGQTKSTRKMSELQPQLKELQTKYASKDTDTQSKLKEET 108
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
S+LY +AGVNP+AGCLP L +PV I +YQA+S E L T F W+
Sbjct: 109 SKLYSEAGVNPVAGCLPLLIQMPVLIAMYQAISR--TEVLKTGNFLWM 154
>gi|343493271|ref|ZP_08731599.1| membrane protein insertase [Vibrio nigripulchritudo ATCC 27043]
gi|342826358|gb|EGU60791.1| membrane protein insertase [Vibrio nigripulchritudo ATCC 27043]
Length = 542
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ V ++G AI++LT IV+ A +PLTK Q S M+
Sbjct: 330 GWLWFIAKPLHWLLSAIQG------VVVNWGLAIMVLTFIVRGAMYPLTKAQYTSMAKMR 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL
Sbjct: 384 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESV 443
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 444 E--LRHSPFFGWITDLSA 459
>gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
Length = 544
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 18/192 (9%)
Query: 82 DSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVI 141
+ A+ S SA G + + W I M+ V+++ D I P ++G +II LT++
Sbjct: 301 NDANTFGLSDSAFGMSVEKSLW-HLIQVPMQIVMQVFYDVI-----P-NWGLSIIFLTIV 353
Query: 142 VKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCL 201
V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCL
Sbjct: 354 VRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCL 413
Query: 202 PTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW---- 253
P + +P++ LY ++N+ LL F WI LS G + +SW
Sbjct: 414 PVILQLPIFFALYSLVNNLF---LLRGANFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIR 470
Query: 254 LLPFVDGHPPLG 265
+LPF+ LG
Sbjct: 471 ILPFIMMFTQLG 482
>gi|117927031|ref|YP_867648.1| protein translocase subunit yidC [Magnetococcus marinus MC-1]
gi|166975874|sp|A0LE49.1|YIDC_MAGSM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|117610787|gb|ABK46242.1| protein translocase subunit yidC [Magnetococcus marinus MC-1]
Length = 556
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++E + VL V ++YG AIILLT+ +K+ FPL K S AM+
Sbjct: 348 GWFHFLAEPLVKVLNFFNS------VVHNYGVAIILLTLAIKLLFFPLANKSYRSMNAMK 401
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+ +++ + ++ ++ +LY+ VNPL GCLP L IPV+ LY+ L ++
Sbjct: 402 KLQPKIEELKKLHGSDRNKMNEAMMKLYQTHKVNPLGGCLPILVQIPVFFALYKVLF-LS 460
Query: 222 NEGLLTEGFFWIPSLSG 238
E WIP LS
Sbjct: 461 VEMRHAPFMLWIPDLSA 477
>gi|381210636|ref|ZP_09917707.1| stage III sporulation protein J [Lentibacillus sp. Grbi]
Length = 254
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
SYG +II++TVIV++ PL KQ++S+ AMQ +QP++K +QQ+Y A Q+++Q ET
Sbjct: 58 SYGLSIIIVTVIVRLILLPLNVKQLKSSKAMQEIQPELKELQQKYSSKDANTQQKLQQET 117
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+L+++ GVNPLAGCLP +P+ I +Y A+
Sbjct: 118 MQLFQKHGVNPLAGCLPIFVQMPILIAMYHAI 149
>gi|384915630|ref|ZP_10015842.1| Inner membrane protein oxaA [Methylacidiphilum fumariolicum SolV]
gi|384526933|emb|CCG91713.1| Inner membrane protein oxaA [Methylacidiphilum fumariolicum SolV]
Length = 591
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG IIL T+++K +PL + AMQ L PK+K +Q RY +++Q E +LY
Sbjct: 381 NYGLDIILFTLLLKGIFWPLQSSANRNMKAMQALSPKLKELQARYKDQPDKMQAEMMKLY 440
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
R+ GVNPL GCLP L +P++IG Y L L + F WI L+ P T+
Sbjct: 441 REYGVNPLGGCLPMLVQVPIFIGFYTMLQGSVE--LRNQSFLWIKDLTQPDTV 491
>gi|375264035|ref|YP_005021478.1| membrane protein insertase [Vibrio sp. EJY3]
gi|369839360|gb|AEX20504.1| membrane protein insertase [Vibrio sp. EJY3]
Length = 540
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AIILLT +V+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHWLLSMIHGFVS------NWGVAIILLTFVVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFISLYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLS 237
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLS 456
>gi|422411250|ref|ZP_16488209.1| stage III sporulation protein J [Listeria innocua FSL S4-378]
gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378]
Length = 287
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D +Y
Sbjct: 13 IASLVIGLVAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM 169
>gi|295106384|emb|CBL03927.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Gordonibacter pamelaeae 7-10-1-b]
Length = 256
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+G AII++TVI +V PL KQ +S+ MQ +QP +K IQ +YA + +R Q E +LY
Sbjct: 22 DWGLAIIIVTVIFRVLISPLMHKQTKSSFQMQKVQPLMKEIQTKYADDPQRQQEEMQKLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVA--NEGLLTEGFFWIPSL-SGPTTIAARQ 246
+ NPLAGCLP L +P+++ L+Q LS + EG E + +PSL P+ A+
Sbjct: 82 AEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGARTEGSTYEFYNLVPSLVERPSEAFAQG 141
Query: 247 SGSGISWLLPFV 258
G+ + +L+ V
Sbjct: 142 FGTFVPYLILMV 153
>gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium
HF0500_27H16]
Length = 653
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G+AII++T+++K+ +PLT K S MQ +QP +K IQ +Y +++Q E ++L
Sbjct: 436 HNWGWAIIIMTILIKLLFWPLTAKSASSMKRMQTIQPLMKEIQAKYKDKPQKMQQEVAKL 495
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSG 248
+R+ VNP AGCLP L +P+++GL+ L + A L FFW+ LS P +
Sbjct: 496 FRENKVNPAAGCLPILIQMPIFLGLFFMLRSAAE--LRFAEFFWVSDLSQPERM------ 547
Query: 249 SGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMEL 289
W + P LG + + +LP+L+ ++ + M +
Sbjct: 548 --FHWGVQI----PILGEY----FNLLPILMGITMFYQMRM 578
>gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10]
gi|122316769|sp|Q0ASI6.1|YIDC_MARMM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10]
Length = 592
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GW F++ ++L +L+ + +G AI+ LT++VK+ FPL + S
Sbjct: 342 NWGWLWFLTRPFVWLLTMLEGALG------QFGLAILALTLMVKIVMFPLANRAYASMAK 395
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+ I++RY +Q++ Q LY+ +NPLAGCLP L IP++ LYQ L N
Sbjct: 396 MKAVQPKMAEIKERYGADQQKQQQALMELYKTEKINPLAGCLPILPQIPIFFALYQTLFN 455
Query: 220 VANEGLLTEGFFWIPSLSG--PTTI 242
A E F WI LS PT I
Sbjct: 456 -AIEMRHAPFFGWIRDLSAADPTNI 479
>gi|399058336|ref|ZP_10744512.1| membrane protein insertase, YidC/Oxa1 family, partial
[Novosphingobium sp. AP12]
gi|398040994|gb|EJL34079.1| membrane protein insertase, YidC/Oxa1 family, partial
[Novosphingobium sp. AP12]
Length = 420
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + ++L + + ++G AIILLT IV+ FP+ ++ S A
Sbjct: 170 DWGWFRWFEKPIFWLL------VKLFSLVGNFGVAIILLTAIVRGIMFPVAQRGFASMAA 223
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q+RY ++++ Q E LY++ GVNP+AGCLP IPV+ LY+ L
Sbjct: 224 MRAIQPKMKALQERYKDDKQKQQQEIMALYKKEGVNPMAGCLPMFLQIPVFFALYKTLI- 282
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+A E WI LS P
Sbjct: 283 LAIEMRHQPFVLWIKDLSAP 302
>gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
gi|254772750|sp|B5RLZ9.1|YIDC_BORDL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
Length = 545
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E S+LY
Sbjct: 340 NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMSKLY 399
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+ GVNP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 400 REEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GD 450
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYAS 286
I + G+ W D +LP +++++Q S
Sbjct: 451 SIYYF-----GYKVFAWTDIR---ILPFIMMITQLLS 479
>gi|389818756|ref|ZP_10208931.1| membrane protein oxaA 1 [Planococcus antarcticus DSM 14505]
gi|388463666|gb|EIM06013.1| membrane protein oxaA 1 [Planococcus antarcticus DSM 14505]
Length = 259
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVAT 146
G + Q G W FI + + KD + +YGF II +T+I+++
Sbjct: 20 GCTEFDQPISDQSEGFWNEFIVWPLVSTITFFKDLLG------TYGFGIIAVTIIIRLVM 73
Query: 147 FPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLETSRLYRQAGVNPLAGCLP 202
PL KQ +S+ MQ +QP++ ++++Y A Q++ Q E L+++ GVNP+AGCLP
Sbjct: 74 LPLMIKQTKSSKRMQEVQPELVKLKEQYKSKDAVTQQKYQKEMMALFQEKGVNPMAGCLP 133
Query: 203 TLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSG 248
L +PV IG Y A+S + + + G F+I L+ P+ I A +G
Sbjct: 134 VLIQMPVLIGFYHAISRMNSTPEIDLGAFFIFPLAEPSIILAVIAG 179
>gi|320104138|ref|YP_004179729.1| YidC/Oxa1 family membrane protein insertase [Isosphaera pallida
ATCC 43644]
gi|319751420|gb|ADV63180.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida
ATCC 43644]
Length = 748
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 27/177 (15%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYA--------GNQERI 181
+YG AIIL+T +++ FPL++KQ MQ+LQP IK IQ + A +E++
Sbjct: 443 NYGVAIILMTCFIRLCLFPLSRKQAVMAKKMQDLQPLIKEIQDKIAKGRNLMDLSQEEKL 502
Query: 182 QL--ETSRLYRQAGVNPL-AGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
QL ET LY + VNP+ AGCLP L +PV +GL+QAL+ + L F +I +L+
Sbjct: 503 QLQQETWALYGRHKVNPISAGCLPALIQLPVMVGLWQALNQSVD--LRNATFLYIDNLAA 560
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQA 295
P +A G W LPF+ + + +LP+L V M+L PP A
Sbjct: 561 PDMLARFPFG----WDLPFLGPY----------FNLLPILAVGLTLVQMKLFSPPPA 603
>gi|295111773|emb|CBL28523.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Synergistetes bacterium SGP1]
Length = 259
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%)
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
V S+G AIILLTVIV++A PLT+KQ+ S MQ LQP+IK +Q +Y ++E + E
Sbjct: 10 VTNSWGLAIILLTVIVRIAMHPLTQKQMVSMQRMQKLQPRIKVLQNKYGDDKETLNREMM 69
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
LY++ ++P AGCLP L +P++I LY+ L N
Sbjct: 70 ALYKEEKISPAAGCLPLLIQLPIFILLYRVLYN 102
>gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
gi|38503017|sp|Q8EKU1.1|YIDC_OCEIH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC; Flags:
Precursor
gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
Length = 252
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 131 YGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLETS 186
YG AII++T+ V++ PL KQ++S+ AMQ +QPK++ IQ++Y A Q+++Q ET
Sbjct: 59 YGLAIIIVTLFVRLLLMPLNVKQIKSSKAMQEIQPKLQEIQKKYTSKDANTQQKLQQETM 118
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW 232
L+++ GVNPLAGCLP L +P+++ +Y A+ + + T F W
Sbjct: 119 ELFQKNGVNPLAGCLPILVQMPIFVAMYHAI--MRTPEISTHSFLW 162
>gi|393770890|ref|ZP_10359366.1| preprotein translocase subunit YidC [Novosphingobium sp. Rr 2-17]
gi|392723546|gb|EIZ80935.1| preprotein translocase subunit YidC [Novosphingobium sp. Rr 2-17]
Length = 613
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L L + ++G AIILLT IV+ FP+ ++ +S +M+
Sbjct: 366 GWFRWFEKPIFWLLTSL------FKLVGNFGVAIILLTAIVRGMMFPVAQRGFKSMASMR 419
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ+RY ++ R Q E LY+ VNP+AGCLP + IPV+ LY+ L +A
Sbjct: 420 AIQPKMKAIQERYKEDKARQQQEIMALYKSEKVNPMAGCLPMVLQIPVFFALYKTLM-LA 478
Query: 222 NEGLLTEGFFWIPSLSGP 239
E FWI LS P
Sbjct: 479 IEMRHQPFVFWIKDLSAP 496
>gi|379713097|ref|YP_005301435.1| membrane protein insertase [Rickettsia massiliae str. AZT80]
gi|376333743|gb|AFB30975.1| membrane protein insertase [Rickettsia massiliae str. AZT80]
Length = 560
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + D + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPLFYAMNFFYDYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E T + WI LS PTTI + LLPF PP A +++ + +
Sbjct: 451 IEMRQTPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E P QA+
Sbjct: 502 FLQQKMSPEPADPMQAQ 518
>gi|398819156|ref|ZP_10577717.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Bradyrhizobium sp. YR681]
gi|398230159|gb|EJN16220.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Bradyrhizobium sp. YR681]
Length = 613
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 366 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 418
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 419 KSVQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 477
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---PV 277
E F WI LS P + L+PF PL H YL L P+
Sbjct: 478 TIEMRHAPFFGWIKDLSAPDPTNLFT----LFGLIPFDPTTIPLFGH----YLALGIWPI 529
Query: 278 LLVVSQYASMELMKPP 293
++ ++ + M+L P
Sbjct: 530 IMGITMWFQMKLNPTP 545
>gi|386859672|ref|YP_006272378.1| Inner membrane protein oxaA [Borrelia crocidurae str. Achema]
gi|384934553|gb|AFI31226.1| Inner membrane protein oxaA [Borrelia crocidurae str. Achema]
Length = 545
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E S+LY
Sbjct: 340 NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMSKLY 399
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+ GVNP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 400 REEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GD 450
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYAS 286
I + G+ W D +LP +++++Q S
Sbjct: 451 SIYYF-----GYKVFAWTDIR---ILPFIMMITQLLS 479
>gi|78357437|ref|YP_388886.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
alaskensis G20]
gi|123552065|sp|Q30YQ5.1|YIDC_DESDG RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|78219842|gb|ABB39191.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
alaskensis G20]
Length = 536
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF F+++ + LK +YG AII+LT++VK+ +PL++K +S
Sbjct: 323 NYGWFTFLAKPLVSGLKFF------YSYAGNYGVAIIILTILVKLLFWPLSQKSYKSMEQ 376
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP ++ I+++Y +++R+ E LY+ VNP GCLP L IPV++GLYQ L N
Sbjct: 377 MKKLQPMVQKIKEKYGDDRQRMNQEVMELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLN 436
>gi|455791724|gb|EMF43521.1| 60Kd inner membrane protein [Leptospira interrogans serovar Lora
str. TE 1992]
gi|456824286|gb|EMF72723.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 770
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 317 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 376
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 377 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 427
>gi|406988836|gb|EKE08707.1| hypothetical protein ACD_17C00036G0001 [uncultured bacterium]
Length = 616
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FIS+ L L ++ S+ +IILLT+ ++ +PL + S + Q
Sbjct: 378 GWFSFISQPFSKFLFYLMSLFHSISR--SWAVSIILLTIALRAMMYPLNAWSIRSGIKTQ 435
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV- 220
L PK+KAI+ +Y + + ++ET LYRQ GVNPL GCLP L T+P +G++ L +
Sbjct: 436 ELAPKVKAIENKYKKDPAKTKIETMNLYRQEGVNPLTGCLPLLLTMPFLLGMFYLLKSSF 495
Query: 221 -ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
L G WI LS P + SW P W + LP+L+
Sbjct: 496 PLRGALFIPG--WIDDLSAPDVL--------FSWGQPL--------WFIGNEFHFLPILM 537
Query: 280 VVSQY 284
++ Y
Sbjct: 538 GLTMY 542
>gi|297193299|ref|ZP_06910697.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486]
gi|197718384|gb|EDY62292.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486]
Length = 432
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +++ A+ P +++G +I+ L +++++ PL KQ++ST M
Sbjct: 8 FSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LS +
Sbjct: 68 QALQPKMKAIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSKI 127
Query: 221 A--NE-GLLTE 228
A NE G+L +
Sbjct: 128 ASGNEIGVLNQ 138
>gi|381184754|ref|ZP_09893279.1| hypothetical protein KKC_15094 [Listeriaceae bacterium TTU M1-001]
gi|380315374|gb|EIA18945.1| hypothetical protein KKC_15094 [Listeriaceae bacterium TTU M1-001]
Length = 287
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 12/170 (7%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A V L + G ++ G W +I + +++ D +Y
Sbjct: 13 IAGLVVLLMAVLSGCGYSTEPITKDSTGFWSHYIVFPLSWIITWFADLFGG-----NYAM 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S M N+QPK+K +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQIKSQKEMMNVQPKLKELQAKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++ +NP+ GCLP L +P+ IG YQA+S A + T+ F W+ +L P
Sbjct: 128 QEHNINPMMGCLPLLIQMPILIGFYQAISRTAE--IKTDTFLWM-TLGNP 174
>gi|399048549|ref|ZP_10740034.1| membrane protein insertase, YidC/Oxa1 family [Brevibacillus sp.
CF112]
gi|398053611|gb|EJL45785.1| membrane protein insertase, YidC/Oxa1 family [Brevibacillus sp.
CF112]
Length = 252
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 85 SGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKV 144
SG +T+ G W ++ + +++K A+ + +YGF I++ TVI+++
Sbjct: 19 SGCNPATAEPIGPDATGFWDKYLVYPLSWLIKE-----SALVLGDNYGFGILVATVIIRL 73
Query: 145 ATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTL 204
PL KQ++S+ MQ LQP+++ I+++Y + ++ Q ET ++++ GVNPLAGCLP L
Sbjct: 74 IVLPLMVKQIKSSKKMQELQPEMQKIREKYKNDPQKAQQETMAVFQKNGVNPLAGCLPML 133
Query: 205 ATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+P+ I Y A+ + E + T+ F W+
Sbjct: 134 VQMPILIAFYHAI--IRTEEIKTQTFLWL 160
>gi|453054316|gb|EMF01769.1| inner membrane protein translocase component YidC [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 378
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ+++T MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYKSDRQRQSEEMMKL 92
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA--------NEGLL 226
Y++ G NPL+ CLP LA P +I LYQ L+++A NE LL
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFISLYQVLNHIAQGKTVGFINEDLL 138
>gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. 56601]
gi|386072636|ref|YP_005986953.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. IPAV]
gi|417784835|ref|ZP_12432540.1| 60Kd inner membrane protein [Leptospira interrogans str. C10069]
gi|418669847|ref|ZP_13231221.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418730731|ref|ZP_13289207.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12758]
gi|421122952|ref|ZP_15583234.1| 60Kd inner membrane protein [Leptospira interrogans str. Brem 329]
gi|38502900|sp|P97041.2|YIDC_LEPIN RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. 56601]
gi|353456425|gb|AER00970.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. IPAV]
gi|409951624|gb|EKO06138.1| 60Kd inner membrane protein [Leptospira interrogans str. C10069]
gi|410343696|gb|EKO94891.1| 60Kd inner membrane protein [Leptospira interrogans str. Brem 329]
gi|410754137|gb|EKR15792.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410774293|gb|EKR54301.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12758]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|294505868|ref|YP_003569926.1| Inner membrane protein oxaA [Salinibacter ruber M8]
gi|294342196|emb|CBH22974.1| Inner membrane protein oxaA [Salinibacter ruber M8]
Length = 654
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 131 YGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYR 190
YG +IL+ V++K +PLTK S M+ LQPK++ I+ +Y E+ Q E +LYR
Sbjct: 417 YGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKYDDEPEKQQEEMMQLYR 476
Query: 191 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
+ GVNPL GCLP P+ I LYQ + L E F W LS P I
Sbjct: 477 ETGVNPLGGCLPMFLQYPILISLYQFIPKSIQ--LRQESFLWAADLSAPDKI 526
>gi|83816022|ref|YP_444208.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855]
gi|83757416|gb|ABC45529.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855]
Length = 665
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 131 YGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYR 190
YG +IL+ V++K +PLTK S M+ LQPK++ I+ +Y E+ Q E +LYR
Sbjct: 428 YGVIVILMAVLIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKYDDEPEKQQEEMMQLYR 487
Query: 191 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
+ GVNPL GCLP P+ I LYQ + L E F W LS P I
Sbjct: 488 ETGVNPLGGCLPMFLQYPILISLYQFIPKSIQ--LRQESFLWAADLSAPDKI 537
>gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262]
gi|38503122|sp|Q926Q5.1|YIDC2_LISIN RecName: Full=Membrane protein insertase YidC 2; AltName:
Full=Foldase YidC 2; AltName: Full=Membrane integrase
YidC 2; AltName: Full=Membrane protein YidC 2; Flags:
Precursor
gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D +Y
Sbjct: 13 IASLVIGLVAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|456987467|gb|EMG22770.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 523
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 317 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 376
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 377 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 427
>gi|418693674|ref|ZP_13254724.1| 60Kd inner membrane protein [Leptospira kirschneri str. H1]
gi|421106860|ref|ZP_15567424.1| 60Kd inner membrane protein [Leptospira kirschneri str. H2]
gi|409958700|gb|EKO17591.1| 60Kd inner membrane protein [Leptospira kirschneri str. H1]
gi|410008326|gb|EKO62001.1| 60Kd inner membrane protein [Leptospira kirschneri str. H2]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417763055|ref|ZP_12411038.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000624]
gi|417774543|ref|ZP_12422407.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000621]
gi|418672149|ref|ZP_13233491.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000623]
gi|421087784|ref|ZP_15548620.1| 60Kd inner membrane protein [Leptospira santarosai str. HAI1594]
gi|421104233|ref|ZP_15564828.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|73921529|sp|Q72VY8.1|YIDC_LEPIC RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans]
gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans]
gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409941111|gb|EKN86745.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000624]
gi|410365685|gb|EKP21078.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430033|gb|EKP74408.1| 60Kd inner membrane protein [Leptospira santarosai str. HAI1594]
gi|410575385|gb|EKQ38403.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000621]
gi|410580753|gb|EKQ48572.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000623]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|417768054|ref|ZP_12415989.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400349499|gb|EJP01792.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|410938908|ref|ZP_11370748.1| 60Kd inner membrane protein [Leptospira noguchii str. 2006001870]
gi|410786109|gb|EKR75060.1| 60Kd inner membrane protein [Leptospira noguchii str. 2006001870]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|418678579|ref|ZP_13239853.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418684455|ref|ZP_13245640.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740496|ref|ZP_13296873.1| 60Kd inner membrane protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|421088358|ref|ZP_15549183.1| 60Kd inner membrane protein [Leptospira kirschneri str. 200802841]
gi|421129789|ref|ZP_15589989.1| 60Kd inner membrane protein [Leptospira kirschneri str. 2008720114]
gi|400321769|gb|EJO69629.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410002989|gb|EKO53438.1| 60Kd inner membrane protein [Leptospira kirschneri str. 200802841]
gi|410359164|gb|EKP06273.1| 60Kd inner membrane protein [Leptospira kirschneri str. 2008720114]
gi|410741154|gb|EKQ85867.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751873|gb|EKR08849.1| 60Kd inner membrane protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 627
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 421 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 480
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 481 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 531
>gi|422414427|ref|ZP_16491384.1| stage III sporulation protein J [Listeria innocua FSL J1-023]
gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ G W +I + +V+ D +Y
Sbjct: 13 IASLVIGLVAVLSGCGYSTDPITKDSTGFWSHYIVFPLSWVITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q++Y+ ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
69.14]
gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
69.14]
Length = 540
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHTLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|427429274|ref|ZP_18919309.1| Inner membrane protein translocase component YidC, long form
[Caenispirillum salinarum AK4]
gi|425880467|gb|EKV29163.1| Inner membrane protein translocase component YidC, long form
[Caenispirillum salinarum AK4]
Length = 585
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ +VL L + ++G AI++ TV +K+A FPL K ++ M+
Sbjct: 360 GWFYFLTKPFFYVLNWLHGLVG------NFGIAILVFTVFIKLAMFPLANKSYKAMSKMK 413
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+K +Q+R+ ++ R+ E LY++ NP++GCLP + IPV+ LY+ L V
Sbjct: 414 KLQPKMKELQERFGDDRTRLNQEMMALYKREKANPVSGCLPIVVQIPVFFALYKVLF-VT 472
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E + WI LS P S + LLP+ PP + VLP+++ V
Sbjct: 473 LEMRHAPFYGWIHDLSAPDPT----SIFNLFGLLPYT---PP----EFLMIGVLPLIMGV 521
Query: 282 SQYASMELMKPP 293
+ Y +L P
Sbjct: 522 TMYLQQKLNPAP 533
>gi|433543006|ref|ZP_20499421.1| membrane protein OxaA precursor [Brevibacillus agri BAB-2500]
gi|432185680|gb|ELK43166.1| membrane protein OxaA precursor [Brevibacillus agri BAB-2500]
Length = 240
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 85 SGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKV 144
SG +T+ G W ++ + +++K A+ + +YGF I++ TVI+++
Sbjct: 7 SGCNPATAEPIGPDATGFWDKYLVYPLSWLIKE-----SALVLGDNYGFGILVATVIIRL 61
Query: 145 ATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTL 204
PL KQ++S+ MQ LQP+++ I+++Y + ++ Q ET ++++ GVNPLAGCLP L
Sbjct: 62 IVLPLMVKQIKSSKKMQELQPEMQKIREKYKNDPQKAQQETMAVFQKNGVNPLAGCLPML 121
Query: 205 ATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+P+ I Y A+ + E + T+ F W+
Sbjct: 122 VQMPILIAFYHAI--IRTEEIKTQTFLWL 148
>gi|390166045|ref|ZP_10218315.1| membrane protein insertase [Sphingobium indicum B90A]
gi|389591109|gb|EIM69087.1| membrane protein insertase [Sphingobium indicum B90A]
Length = 567
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 24/193 (12%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + I ++G AII LT +V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEKPIFALLHWLFEHIG------NFGVAIICLTFVVRGLMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y ++ R+Q E LY++ VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKMKALQEKYKDDKPRLQQEMMELYKREKVNPLAGCLPIFIQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLP 276
+ E WI LS P + + LLPF PP A+L VL
Sbjct: 447 LTIEMRHQPFVLWIKDLSAPDPLHI----VNLFGLLPFT---PP-------AFLGIGVLA 492
Query: 277 VLLVVSQYASMEL 289
+LL +S Y +L
Sbjct: 493 LLLGISMYFQFKL 505
>gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
Length = 567
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 24/193 (12%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + I ++G AII LT +V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEKPIFALLHWLFEHIG------NFGVAIICLTFVVRGLMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y ++ R+Q E LY++ VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKMKALQEKYKDDKPRLQQEMMELYKREKVNPLAGCLPIFIQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLP 276
+ E WI LS P + + LLPF PP A+L VL
Sbjct: 447 LTIEMRHQPFVLWIKDLSAPDPLHI----VNLFGLLPFT---PP-------AFLGIGVLA 492
Query: 277 VLLVVSQYASMEL 289
+LL +S Y +L
Sbjct: 493 LLLGISMYFQFKL 505
>gi|410453617|ref|ZP_11307565.1| OxaA-like protein precursor [Bacillus bataviensis LMG 21833]
gi|409932972|gb|EKN69920.1| OxaA-like protein precursor [Bacillus bataviensis LMG 21833]
Length = 257
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 20/174 (11%)
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV-PYSYGFAIILLTVIVKVA 145
G + ++ G W +I + +V+K + H+ SYG ++I++T+++++A
Sbjct: 20 GCSEIKKPITSESTGFWNEYIVYPLSWVIK------EGAHLLGGSYGLSLIVVTILIRLA 73
Query: 146 TFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLYRQAGVNPLAGCL 201
PL KQ S+ AMQ LQP++KA++++Y+ Q+++Q ET L+ + GVNP+AGC
Sbjct: 74 ILPLMIKQTRSSKAMQALQPEMKALREKYSSKDQKTQQKLQQETMALFSKHGVNPMAGCF 133
Query: 202 PTLATIPVWIGLYQALS---NVANEGLL------TEGFFWIPSLSGPTTIAARQ 246
P + +P+ IG Y A+S +A + L + +F +P ++G TT ++
Sbjct: 134 PLIVQMPILIGFYHAISRTREIAQDSFLWFDLGEKDPYFILPIIAGVTTFIQQK 187
>gi|197333980|ref|YP_002154775.1| inner membrane protein translocase component YidC [Vibrio fischeri
MJ11]
gi|423684740|ref|ZP_17659548.1| membrane protein insertase [Vibrio fischeri SR5]
gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11]
gi|371495787|gb|EHN71381.1| membrane protein insertase [Vibrio fischeri SR5]
Length = 541
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L ++ + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIASPLHKLLSFIQ------GIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALME-S 441
Query: 222 NEGLLTEGFFWIPSLSG 238
E T F WI LS
Sbjct: 442 VELRHTPFFGWITDLSA 458
>gi|456968186|gb|EMG09421.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 664
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 211 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 270
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 271 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 321
>gi|59710610|ref|YP_203386.1| inner membrane protein translocase component YidC [Vibrio fischeri
ES114]
gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio
fischeri ES114]
Length = 541
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L ++ + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIASPLHKLLSFIQ------GIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 383 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALME-S 441
Query: 222 NEGLLTEGFFWIPSLSG 238
E T F WI LS
Sbjct: 442 VELRHTPFFGWITDLSA 458
>gi|407770846|ref|ZP_11118212.1| membrane protein insertase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286229|gb|EKF11719.1| membrane protein insertase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 571
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVH 126
+E+ L+ A LD + T+ D A + GWF F+++ L+ L H
Sbjct: 314 SETRLFAGAKEVSLLDQYANDYGITNFDLAI--DFGWFYFLTKPFFLFLQWLN------H 365
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+ ++G +I++ TV+VK +PL K +S AM+ LQP+I +++++ +++R Q E
Sbjct: 366 LVGNFGVSILIFTVLVKAVMYPLANKSYKSMSAMKKLQPQITKMREQFKDDRQRQQQEMM 425
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-WIPSLSGP 239
LY++ +NP +GCLP + IPV+ LY+ L N + FF WI LS P
Sbjct: 426 ALYKREKINPASGCLPIVVQIPVFFALYKVL--FVNIEMRHAPFFGWIQDLSAP 477
>gi|418689236|ref|ZP_13250358.1| 60Kd inner membrane protein [Leptospira interrogans str. FPW2026]
gi|418698457|ref|ZP_13259434.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418705458|ref|ZP_13266323.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|421115749|ref|ZP_15576148.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421124342|ref|ZP_15584599.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133637|ref|ZP_15593783.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400361381|gb|EJP17347.1| 60Kd inner membrane protein [Leptospira interrogans str. FPW2026]
gi|410012682|gb|EKO70774.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410022082|gb|EKO88861.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410437473|gb|EKP86572.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410762600|gb|EKR28761.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410765309|gb|EKR36011.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 424 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 483
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 484 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 534
>gi|418713075|ref|ZP_13273802.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 08452]
gi|410790158|gb|EKR83852.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 08452]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 424 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 483
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 484 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 534
>gi|417781805|ref|ZP_12429541.1| 60Kd inner membrane protein [Leptospira weilii str. 2006001853]
gi|410777991|gb|EKR62633.1| 60Kd inner membrane protein [Leptospira weilii str. 2006001853]
Length = 623
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 418 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKARQQKTMELY 477
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 478 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 528
>gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925]
gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925]
Length = 220
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 16/138 (11%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG II+LT+I+++ FPL KQ++S + M +QP++K +Q++Y + +R Q E +LY
Sbjct: 16 SYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKYKNDPQRQQQEMMKLY 75
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ GVNPL GCLP L P+ I L+ +N++ PS+ T + +
Sbjct: 76 KEYGVNPLGGCLPLLVQWPILIALFYVFNNLSKIE---------PSIVNVTFLGVKLMEP 126
Query: 250 GI-------SWLLPFVDG 260
I +W+LP V
Sbjct: 127 AILKPEYWYTWILPIVSA 144
>gi|417771775|ref|ZP_12419667.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418683831|ref|ZP_13245026.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400324580|gb|EJO76874.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409946188|gb|EKN96200.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455666466|gb|EMF31884.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 424 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 483
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 484 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 534
>gi|376298007|ref|YP_005169237.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
desulfuricans ND132]
gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
desulfuricans ND132]
Length = 555
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 6/124 (4%)
Query: 94 DGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQ 153
D A N GWF F+++ + L + +YG AII+LTVI+K+ +PL++K
Sbjct: 327 DLADAVNFGWFDFLAKPLLVGLNFFYGFVG------NYGVAIIILTVIIKLIFWPLSQKS 380
Query: 154 VESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGL 213
S M+ LQP + ++++Y +++R+ ET LY+ VNP+ GCLP + IPV+ GL
Sbjct: 381 YGSMEKMKKLQPMVAKLREKYGDDKQRLNQETMALYKTYKVNPMGGCLPMVVQIPVFFGL 440
Query: 214 YQAL 217
Y+AL
Sbjct: 441 YKAL 444
>gi|116874193|ref|YP_850974.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116743071|emb|CAK22195.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 287
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
+A + L + G ++ ++ G W +I + +++ D +Y
Sbjct: 13 IASLVIGLVAVLSGCGYSTDPITSESTGFWSHYIVFPLSWLITWFSDLFGG-----NYAV 67
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
II++T+++++ PL KQ++S AM +LQPKIK +Q +YA ++++Q ET RLY
Sbjct: 68 GIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQVKYASKDNETKQKLQQETMRLY 127
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
++ VNP+ GCLP L +P+ +G YQA+S A + T+ F W+
Sbjct: 128 QENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM 169
>gi|37678187|ref|NP_932796.1| inner membrane protein translocase component YidC [Vibrio
vulnificus YJ016]
gi|61214266|sp|Q7MQK5.1|YIDC_VIBVY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016]
Length = 539
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 436
>gi|418727008|ref|ZP_13285607.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12621]
gi|409959755|gb|EKO23521.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12621]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 424 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 483
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 484 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 534
>gi|27364440|ref|NP_759968.1| insertase [Vibrio vulnificus CMCP6]
gi|38503001|sp|Q8DDI2.1|YIDC_VIBVU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6]
Length = 539
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 436
>gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74]
gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74]
Length = 434
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 103 WFGFISEAMEFVL---KILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
WF FI+ + +V+ L I +++G +I+ L +I+++ PL KQ+++T A
Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQP++K IQ+RY +++R E +LY+++G NPLA CLP L P + LY L
Sbjct: 67 MQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHVLDG 126
Query: 220 VANE 223
+A+
Sbjct: 127 IASN 130
>gi|385816609|ref|YP_005853000.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126646|gb|ADY85976.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 289
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSAD--GATQKNGGWFG--FISEAMEFVLKILKDGI 122
T+ LL LA V SG A T+ + + W+ + +FVL I K
Sbjct: 10 TKRLLAVLALVTVFALVLSGCATQTTQKPTQISHNSSNWWDAWVVYYLSQFVLWIAKVCG 69
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----Q 178
SYG+AII+ TVI++V PL Q+ ST MQ +QP++KA+Q++Y+ +
Sbjct: 70 G------SYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETR 123
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
++ ET +LY++AGVNP AGCLP + +PV LYQA+
Sbjct: 124 NKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAI 162
>gi|104774817|ref|YP_619797.1| hypothetical protein Ldb2216 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514946|ref|YP_813852.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|418030565|ref|ZP_12669054.1| hypothetical protein LDBUL1632_01848 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418036031|ref|ZP_12674466.1| hypothetical protein LDBUL1519_01166 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103423898|emb|CAI98940.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116094261|gb|ABJ59414.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|354686908|gb|EHE87032.1| hypothetical protein LDBUL1632_01848 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354688881|gb|EHE88903.1| hypothetical protein LDBUL1519_01166 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 289
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSAD--GATQKNGGWFG--FISEAMEFVLKILKDGI 122
T+ LL LA V SG A T+ + + W+ + +FVL I K
Sbjct: 10 TKRLLAVLALVTVFALVLSGCATQTTQKPTQISHNSSNWWDAWVVYYLSQFVLWIAKVCG 69
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----Q 178
SYG+AII+ TVI++V PL Q+ ST MQ +QP++KA+Q++Y+ +
Sbjct: 70 G------SYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETR 123
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
++ ET +LY++AGVNP AGCLP + +PV LYQA+
Sbjct: 124 NKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAI 162
>gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form
[Vibrio vulnificus MO6-24/O]
gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form
[Vibrio vulnificus MO6-24/O]
Length = 539
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ V ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHWLLSVIQS------VVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 436
>gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
Length = 520
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L +L I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 306 GWFTFIAKPMFAFLNLLYGYIG------NWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLK 359
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +Q +Y G+ +++ + LY++ G NP+ GCLP L IP++ +Y+ L N A
Sbjct: 360 DLAPKVKELQAKYKGDPQKLNMHMMELYKKNGANPMGGCLPILMQIPIFFAIYRVLLN-A 418
Query: 222 NEGLLTEGFFWIPSLS 237
E WI LS
Sbjct: 419 IELKAAPWILWIHDLS 434
>gi|418707772|ref|ZP_13268592.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772193|gb|EKR47387.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 630
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 424 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY 483
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 484 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 534
>gi|359409461|ref|ZP_09201929.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356676214|gb|EHI48567.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 582
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 23/229 (10%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
++ L++ A SLD + + D A + GWF F+++ + + L V
Sbjct: 319 QTYLFSGAKKVTSLDRYAEELNIANFDLAI--DFGWFYFLTKPFFYAISWL------FGV 370
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
++G AII T+IV++ FPL K +S M++L PKI+ ++ Y +++R+ E
Sbjct: 371 FGNFGLAIIGFTIIVRLLLFPLANKSYKSMAKMRHLAPKIQKMRADYGDDKQRLNKEMME 430
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG--PTTIAAR 245
LY++ VNP AGCLP L IPV+ LY+ L V+ E F WI LS PT+I
Sbjct: 431 LYKREKVNPAAGCLPILLQIPVFFALYKVLY-VSIEMRHAPFFGWIQDLSAIDPTSIF-- 487
Query: 246 QSGSGISWLLPF-VDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ LLP+ VD P + + P+L+ +S M L PP
Sbjct: 488 ----NLFGLLPYSVDFMPQF-----LSIGIWPILMGISMAVQMRLNPPP 527
>gi|393721374|ref|ZP_10341301.1| membrane protein insertase [Sphingomonas echinoides ATCC 14820]
Length = 585
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + L L I ++G AIILLTV ++ FP+ ++Q S AM+
Sbjct: 353 GWFEIVEKPIFKYLDWLFRMIG------NFGVAIILLTVTIRTLIFPVAQRQFASMAAMK 406
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+KAIQ++Y ++ R Q E LY+ VNPLAGCLPTL IP+ LY+ L +
Sbjct: 407 AIQPKMKAIQEKYKDDKARAQQEVMALYKAEKVNPLAGCLPTLIQIPIMYSLYKVL--LL 464
Query: 222 NEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280
+ + F WI LS P + + LP A V+PVLL
Sbjct: 465 TIEMRHQPFVGWIHDLSAPDPATILNMFGYLPYHLP-----------SFLAIGVVPVLLG 513
Query: 281 VSQYASMELMKPP 293
VS + +L P
Sbjct: 514 VSMFFQFKLNPAP 526
>gi|374572322|ref|ZP_09645418.1| membrane protein insertase, YidC/Oxa1 family protein
[Bradyrhizobium sp. WSM471]
gi|374420643|gb|EHR00176.1| membrane protein insertase, YidC/Oxa1 family protein
[Bradyrhizobium sp. WSM471]
Length = 615
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 368 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 420
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 421 KSVQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 479
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 480 TIEMRHAPFFGWIKDLSAP 498
>gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio
shilonii AK1]
gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio
shilonii AK1]
Length = 540
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHTLLSFIQG------IVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHSPFFGWIHDLSA 457
>gi|357390826|ref|YP_004905667.1| putative OxaA family protein [Kitasatospora setae KM-6054]
gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054]
Length = 397
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 66/94 (70%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+++ V++++ PL KQ+++T AMQ +QPK+KAIQ+RY +++R E +LY
Sbjct: 35 AWGLSIVMMVVVIRICLIPLFVKQIKATRAMQAIQPKMKAIQERYKNDKQRQSEEMMKLY 94
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
++AG NP + CLP L P + LY L+++AN+
Sbjct: 95 KEAGTNPFSSCLPILVQAPFFTALYGVLASIAND 128
>gi|404252906|ref|ZP_10956874.1| membrane protein insertase [Sphingomonas sp. PAMC 26621]
Length = 589
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIILLTV ++ FP+ ++Q S AM+ LQPK+KAIQ++Y ++ R Q E LY
Sbjct: 375 NFGVAIILLTVTIRTLIFPVAQRQFASMAAMKALQPKMKAIQEKYKDDKARQQQEVMALY 434
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-WIPSLSGPTTIAARQSG 248
+ VNPLAGCLPTL IP+ LY+ L + + + F WI LS P
Sbjct: 435 KTEKVNPLAGCLPTLIQIPIMYSLYKVL--LLTIEMRHQPFVGWIHDLSAPDP------- 485
Query: 249 SGISWLLPFVDGH-PPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ I L ++ H PP A ++PVLL VS + +L P
Sbjct: 486 ATILNLFGYLPYHLPPF-----LAIGIVPVLLGVSMFFQFKLNPAP 526
>gi|386398879|ref|ZP_10083657.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Bradyrhizobium sp. WSM1253]
gi|385739505|gb|EIG59701.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Bradyrhizobium sp. WSM1253]
Length = 615
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 368 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 420
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 421 KSVQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 479
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 480 TIEMRHAPFFGWIKDLSAP 498
>gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
Length = 608
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF F+++ M + + L H ++G AI+L+TVI+K+ FPL K S
Sbjct: 359 DWGWFYFLTKPMFYAIDFL------FHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSK 412
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QP++ I+++YA ++++ Q LY++ +NPLAGCLP L IPV+ LY+ L
Sbjct: 413 MKLVQPQMTEIREKYADDRQKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLF- 471
Query: 220 VANEGLLTEGFFWIPSLSGP 239
V E F WI LS P
Sbjct: 472 VTIEMRHAPFFGWIQDLSAP 491
>gi|395771384|ref|ZP_10451899.1| inner membrane protein translocase component YidC [Streptomyces
acidiscabies 84-104]
Length = 428
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHKVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY+ G NPL+ CLP LA P + LY LS +
Sbjct: 68 QTLQPEMKKIQERYKNDRQRQSEEMMKLYKDTGTNPLSSCLPILAQSPFFFALYHVLSAI 127
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSG-SGISWLLPFVDGH---PPLGWHDTAAYLVLP 276
A+ I ++ +ARQ+ G + F DG LG H T +V
Sbjct: 128 ASGKT-------IGVINNDLLASARQAHIFGAPLAVKFTDGASKVEALGAHITDVRVVTA 180
Query: 277 VLLVV 281
+++V+
Sbjct: 181 IMIVL 185
>gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C]
gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C]
Length = 368
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY L+++AN
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLASIAN 129
>gi|420520271|ref|ZP_15018706.1| inner membrane protein oxaA [Helicobacter pylori Hp H-5b]
gi|393124667|gb|EJC25134.1| inner membrane protein oxaA [Helicobacter pylori Hp H-5b]
Length = 547
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
Length = 415
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 11/134 (8%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +++ A+ P +++G +I+ L V++++ PL KQ++S M
Sbjct: 8 FSFITTLVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LSN+
Sbjct: 68 QALQPKMKAIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSNI 127
Query: 221 A--------NEGLL 226
A NE LL
Sbjct: 128 ASGKTVGVINESLL 141
>gi|406990625|gb|EKE10263.1| hypothetical protein ACD_16C00059G0010 [uncultured bacterium]
Length = 568
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 18/207 (8%)
Query: 38 STRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGAT 97
+T + +Q P L+ +I++ F +L L D T D A
Sbjct: 278 NTFITAQYQRDPLTLAPGQTIEVTDYFFAGAKILNLL-------DGYEETIGMTHFDLAV 330
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+ GWF F+++ + + L+ LK + ++G AI+ LTVI+K+ FPL K ES
Sbjct: 331 --DFGWFYFLTKPIFYALEFLKGLLG------NFGLAILGLTVIIKLIFFPLANKSYESM 382
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQP+I+ ++RY ++ ++ + +Y++ VNP+AGCLP + IPV+ LY+ L
Sbjct: 383 AKMKALQPEIEKTRERYKEDRLKMNEKVMEIYKKEKVNPMAGCLPMIIQIPVFFALYKVL 442
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTI 242
V+ E + WI LS PTTI
Sbjct: 443 F-VSIEMRHAPFYGWIHDLSAPDPTTI 468
>gi|395492518|ref|ZP_10424097.1| membrane protein insertase [Sphingomonas sp. PAMC 26617]
Length = 589
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIILLTV ++ FP+ ++Q S AM+ LQPK+KAIQ++Y ++ R Q E LY
Sbjct: 375 NFGVAIILLTVTIRTLIFPVAQRQFASMAAMKALQPKMKAIQEKYKDDKARQQQEVMALY 434
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-WIPSLSGPTTIAARQSG 248
+ VNPLAGCLPTL IP+ LY+ L + + + F WI LS P
Sbjct: 435 KTEKVNPLAGCLPTLIQIPIMYSLYKVL--LLTIEMRHQPFVGWIHDLSAPDP------- 485
Query: 249 SGISWLLPFVDGH-PPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
+ I L ++ H PP A ++PVLL VS + +L P
Sbjct: 486 ATILNLFGYLPYHLPPF-----LAIGIVPVLLGVSMFFQFKLNPAP 526
>gi|374314440|ref|YP_005060869.1| preprotein translocase, membrane component [Serratia symbiotica
str. 'Cinara cedri']
gi|363988666|gb|AEW44857.1| preprotein translocase, membrane component [Serratia symbiotica
str. 'Cinara cedri']
Length = 546
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK + I ++G +II++T IV+ +PLTK Q S M+
Sbjct: 329 GWLWFISQPLLKLLKFIHGFIS------NWGVSIIIITFIVRGIMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI AI++R N++RI E LY+ VNPL GCLP + +P+++ LY L N
Sbjct: 383 MLQPKIHAIRERIGDNKQRISQEMIALYKSEQVNPLGGCLPLIIQMPIFLALYYMLMNSV 442
Query: 222 NEGLLTEGFFWIPSLSG 238
E FWI LS
Sbjct: 443 -ELRHAPFVFWIHDLSA 458
>gi|420503505|ref|ZP_15002039.1| membrane protein oxaA [Helicobacter pylori Hp P-41]
gi|393149601|gb|EJC49911.1| membrane protein oxaA [Helicobacter pylori Hp P-41]
Length = 547
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|417949541|ref|ZP_12592675.1| membrane protein insertase [Vibrio splendidus ATCC 33789]
gi|342808050|gb|EGU43220.1| membrane protein insertase [Vibrio splendidus ATCC 33789]
Length = 540
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHTLLSFIQGFVS------NWGVAIIILTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 382 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWITDLSA 457
>gi|441505625|ref|ZP_20987607.1| Inner membrane protein translocase component YidC, long form
[Photobacterium sp. AK15]
gi|441426708|gb|ELR64188.1| Inner membrane protein translocase component YidC, long form
[Photobacterium sp. AK15]
Length = 537
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L ++ + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 325 GWLWFIASPLHTLLSFIQG------IVVNWGVAIIILTFIVRGAMYPLTKAQYTSMAKMR 378
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY +L
Sbjct: 379 MLQPKLQAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPILVQMPIFIALYWSLMESV 438
Query: 222 NEGLLTEGFFWIPSLS 237
E T F WI LS
Sbjct: 439 -ELRHTPFFGWIHDLS 453
>gi|410629480|ref|ZP_11340180.1| inner membrane protein oxaA [Glaciecola arctica BSs20135]
gi|410150965|dbj|GAC17047.1| inner membrane protein oxaA [Glaciecola arctica BSs20135]
Length = 545
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTKKQ ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 355 NWGFSIILITIVVKGAMYPLTKKQYESMAKMRALKPKMDALKERYGDDKQKMQKAMMEMY 414
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 415 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLS 461
>gi|383648018|ref|ZP_09958424.1| membrane protein insertase [Sphingomonas elodea ATCC 31461]
Length = 572
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + L L + ++G AIILLT+ ++ FP+ +KQ S
Sbjct: 332 DWGWFEIIERPIFTYLSWLFKLVG------NFGVAIILLTITIRGLLFPIAQKQFASMAK 385
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KAIQ+RY +++R Q E +LY+ VNPLAGC P L IP+ LY+ L
Sbjct: 386 MRQVQPKMKAIQERYKDDKQRQQQEIMQLYKTEKVNPLAGCAPMLLQIPIMFALYKVLL- 444
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
+ E WI LS P + I L ++ PP A V+PVLL
Sbjct: 445 LTIEMRHQPFMLWIKDLSAP-------DPATILNLFGYLHFTPP----SFLAIGVVPVLL 493
Query: 280 VVSQYASMELMKPP 293
+S + M + P
Sbjct: 494 GISMFFQMRMNPAP 507
>gi|386390050|ref|ZP_10074846.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
paraphrohaemolyticus HK411]
gi|385693734|gb|EIG24366.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
paraphrohaemolyticus HK411]
Length = 543
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AIIL+T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTTIQKAVS------NWGIAIILVTIVVKSILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P++I LY
Sbjct: 382 MLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC
[Streptomyces clavuligerus ATCC 27064]
gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 415
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 11/134 (8%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +++ A+ P +++G +I+ L V++++ PL KQ++S M
Sbjct: 8 FSFITTPVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LSN+
Sbjct: 68 QALQPKMKAIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSNI 127
Query: 221 A--------NEGLL 226
A NE LL
Sbjct: 128 ASGKTVGVINESLL 141
>gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
gi|375129462|ref|YP_004991558.1| inner membrane protein translocase component YidC [Vibrio furnissii
NCTC 11218]
gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC
[Vibrio furnissii NCTC 11218]
Length = 540
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHWLLSVIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY+ VNPL GCLP +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKTEKVNPLGGCLPIFLQMPIFISLYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|398332199|ref|ZP_10516904.1| preprotein translocase, YidC subunit [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 623
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 418 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKVRQQKTMELY 477
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 478 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 528
>gi|350568565|ref|ZP_08936963.1| membrane protein OxaA [Propionibacterium avidum ATCC 25577]
gi|348660808|gb|EGY77504.1| membrane protein OxaA [Propionibacterium avidum ATCC 25577]
Length = 359
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AII LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIICLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALS----NVANEGLLTEGFFWIPSLSGPTTIAAR 245
R+ GVNP A CLP L +P+++ L++ L +A TE + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDGASRGIARGHFFTENPGLMESLQHAKFFGAE 170
Query: 246 QSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP DG G A +++ +++ Y ++LM+ PP++
Sbjct: 171 LAGR----FLPMNDG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|420489553|ref|ZP_14988145.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11]
gi|420523494|ref|ZP_15021912.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11b]
gi|393104974|gb|EJC05525.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11]
gi|393125843|gb|EJC26295.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11b]
Length = 547
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|387772178|ref|ZP_10128136.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
parahaemolyticus HK385]
gi|386907699|gb|EIJ72403.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
parahaemolyticus HK385]
Length = 543
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++G AIIL+T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTTIQKAVS------NWGIAIILVTIVVKSILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P++I LY
Sbjct: 382 MLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|420449514|ref|ZP_14948383.1| inner membrane protein oxaA [Helicobacter pylori Hp H-44]
gi|393062314|gb|EJB63169.1| inner membrane protein oxaA [Helicobacter pylori Hp H-44]
Length = 547
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|421099121|ref|ZP_15559781.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200901122]
gi|410797855|gb|EKR99954.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200901122]
Length = 623
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ S MQ L P++K I +++A + + Q +T LY
Sbjct: 418 NYGWSIIIFAILFKLVFYPLNQKQANSMKKMQELSPQLKTINEKFANDSKVRQQKTMELY 477
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 478 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 528
>gi|407069490|ref|ZP_11100328.1| membrane protein insertase [Vibrio cyclitrophicus ZF14]
Length = 539
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHTLLSFIQ------GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 381 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWITDLSA 456
>gi|300811989|ref|ZP_07092445.1| putative stage III sporulation protein J [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|313124785|ref|YP_004035044.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|300497015|gb|EFK32081.1| putative stage III sporulation protein J [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|312281348|gb|ADQ62067.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 289
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSADGA--TQKNGGWFG--FISEAMEFVLKILKDGI 122
T+ LL LA V SG A T+ + + W+ + +FVL I K
Sbjct: 10 TKRLLAALALVTVFALVLSGCATQTTQKPTPISHNSSNWWDAWVVYYLSQFVLWIAKVCG 69
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----Q 178
SYG+AII+ TVI++V PL Q+ ST MQ +QP++KA+Q++Y+ +
Sbjct: 70 G------SYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETR 123
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
++ ET +LY++AGVNP AGCLP + +PV LYQA+
Sbjct: 124 NKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAI 162
>gi|365860758|ref|ZP_09400553.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. W007]
gi|364009915|gb|EHM30860.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. W007]
Length = 421
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS++A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIAS 129
>gi|456860899|gb|EMF79609.1| 60Kd inner membrane protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 498
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 293 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKVRQQKTMELY 352
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 353 KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI 403
>gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio
sp. MED222]
gi|218708091|ref|YP_002415712.1| inner membrane protein translocase component YidC [Vibrio
splendidus LGP32]
gi|254778171|sp|B7VGH7.1|YIDC_VIBSL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio
sp. MED222]
gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32]
Length = 539
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHTLLSFIQ------GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 381 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWITDLSA 456
>gi|420491549|ref|ZP_14990127.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13]
gi|420525417|ref|ZP_15023822.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13b]
gi|393104762|gb|EJC05316.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13]
gi|393130223|gb|EJC30653.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13b]
Length = 549
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|420419404|ref|ZP_14918494.1| inner membrane protein oxaA [Helicobacter pylori NQ4076]
gi|393031310|gb|EJB32382.1| inner membrane protein oxaA [Helicobacter pylori NQ4076]
Length = 547
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form
[Streptomyces griseoaurantiacus M045]
gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form
[Streptomyces griseoaurantiacus M045]
Length = 443
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 102 GWFGFISEAMEFVL---KILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
G+F FI+ + +V+ + I +++G +I+ L +++++ PL KQ+++T
Sbjct: 6 GFFSFITTPVSWVIVQFHTVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATR 65
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
AMQ LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+
Sbjct: 66 AMQTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLN 125
Query: 219 NVA 221
+A
Sbjct: 126 GIA 128
>gi|254230607|ref|ZP_04923966.1| inner membrane protein OxaA [Vibrio sp. Ex25]
gi|262392790|ref|YP_003284644.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25]
gi|151936867|gb|EDN55766.1| inner membrane protein OxaA [Vibrio sp. Ex25]
gi|262336384|gb|ACY50179.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25]
Length = 540
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHMLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESV 441
Query: 222 NEGLLTEGFF-WIPSLS 237
L FF WI LS
Sbjct: 442 E--LRHSPFFGWIHDLS 456
>gi|451972212|ref|ZP_21925423.1| inner membrane protein, 60 kDa [Vibrio alginolyticus E0666]
gi|451931877|gb|EMD79560.1| inner membrane protein, 60 kDa [Vibrio alginolyticus E0666]
Length = 540
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHMLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLS 237
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLS 456
>gi|269965283|ref|ZP_06179404.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B]
gi|269830084|gb|EEZ84312.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B]
Length = 540
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHMLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESV 441
Query: 222 NEGLLTEGFF-WIPSLS 237
L FF WI LS
Sbjct: 442 E--LRHSPFFGWIHDLS 456
>gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 421
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ AV P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANE---GLLTE 228
A+ G++ E
Sbjct: 128 ASNDTIGVINE 138
>gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein [Heliobacterium
modesticaldum Ice1]
gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor
[Heliobacterium modesticaldum Ice1]
Length = 222
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AIIL+T+++K+ +PL+ KQ++S M L PK KA+Q++Y + ++ Q +LY
Sbjct: 27 SYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAPKQKALQEKYKKDPQKAQEAMMQLY 86
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++ GVNPL+GCLP L P+ I Y L F W+ +LS P
Sbjct: 87 KEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLNEAHATFLWVANLSAP 136
>gi|411003714|ref|ZP_11380043.1| inner membrane protein translocase component YidC [Streptomyces
globisporus C-1027]
Length = 421
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS++A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIAS 129
>gi|420452823|ref|ZP_14951664.1| inner membrane protein oxaA [Helicobacter pylori Hp A-6]
gi|393066636|gb|EJB67455.1| inner membrane protein oxaA [Helicobacter pylori Hp A-6]
Length = 547
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC
[Bermanella marisrubri]
gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC
[Oceanobacter sp. RED65]
Length = 538
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW ++++ + ++L+++ D + ++G+AII+LT++VK+A FPL+ S M+
Sbjct: 327 GWLWWVAQPLFWLLQLMHD------IAGNWGWAIIMLTILVKLAFFPLSAASYRSMANMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+ PK+ AI+++YA N+E++ E LY++ +NPL GCLP L +PV+I LY L
Sbjct: 381 RVAPKLTAIKEQYADNREQLSKEMMNLYKKEKINPLGGCLPILVQMPVFIALYWVL 436
>gi|91228357|ref|ZP_01262285.1| putative inner membrane protein translocase component YidC [Vibrio
alginolyticus 12G01]
gi|91188117|gb|EAS74421.1| putative inner membrane protein translocase component YidC [Vibrio
alginolyticus 12G01]
Length = 227
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S
Sbjct: 13 DYGWLWFIAKPLHMLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAK 66
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 67 MRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALME 126
Query: 220 VANEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 127 SVE--LRHSPFFGWIHDLSA 144
>gi|239989134|ref|ZP_04709798.1| putative inner membrane protein translocase component YidC
[Streptomyces roseosporus NRRL 11379]
gi|291446136|ref|ZP_06585526.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998]
gi|291349083|gb|EFE75987.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998]
Length = 421
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS++A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIAS 129
>gi|374308910|ref|YP_005055341.1| stage III sporulation protein J [Filifactor alocis ATCC 35896]
gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896]
Length = 243
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
V +YG AII T+IVK+A PLT Q +S + M +QP I+ IQ++Y ++++ T+
Sbjct: 9 VTQNYGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKDKQKQAELTT 68
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN-----VANEGLLT---EGFFWIPSLSG 238
+LY++ GVNP+ GCLP L +P+ L++AL N +E L F W+ +LS
Sbjct: 69 QLYKEHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLFQVADTSFLWLKNLSS 128
Query: 239 PTTIAARQSGSGISWLLPFV 258
P I G ++ P V
Sbjct: 129 PDIITI--GGFAFPFIFPIV 146
>gi|154250755|ref|YP_001411579.1| 60 kDa inner membrane insertion protein [Parvibaculum
lavamentivorans DS-1]
gi|154154705|gb|ABS61922.1| 60 kDa inner membrane insertion protein [Parvibaculum
lavamentivorans DS-1]
Length = 609
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M L + A+HV ++G AI+++TV++K+ +PL K + M+
Sbjct: 361 GWFWFLTQPMFDALHFI-----ALHVG-NFGIAILVITVLIKLVFYPLANKSYVAMSKMK 414
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ +++RY ++ + Q E LY++ VNPLAGCLP L IPV+ LY+ L V
Sbjct: 415 KLQPEMEKLRERYKDDKLKQQQEIMELYKKEKVNPLAGCLPVLIQIPVFFALYKVLF-VT 473
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 474 IEMRHAPFFGWINDLSAP 491
>gi|384227471|ref|YP_005619216.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538411|gb|AEO08388.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 536
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW F+S+ + +L IL + + ++GF+IIL+T I+K T+PLTK Q S L M+
Sbjct: 327 GWLWFLSQPLFKLLTILHNVVG------NWGFSIILITFIMKAVTYPLTKAQYVSMLKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKIK I+++++ +++RI E LY++ +NPL G LP +P+++ LY L
Sbjct: 381 ALQPKIKEIKEKFSNDKQRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYML 436
>gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon
kondoi)]
Length = 537
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW F+S+ + +L IL + + ++GF+IIL+T I+K T+PLTK Q S L M+
Sbjct: 328 GWLWFLSQPLFKLLTILHNVVG------NWGFSIILITFIMKAVTYPLTKAQYVSMLKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKIK I+++++ +++RI E LY++ +NPL G LP +P+++ LY L
Sbjct: 382 ALQPKIKEIKEKFSNDKQRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYML 437
>gi|383774848|ref|YP_005453917.1| inner membrane protein OxaA [Bradyrhizobium sp. S23321]
gi|381362975|dbj|BAL79805.1| inner membrane protein OxaA [Bradyrhizobium sp. S23321]
Length = 616
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 20/196 (10%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 369 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 421
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP++ A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 422 KSVQPQLAALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 480
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---PV 277
E F WI LS P + L+PF PL H YL L P+
Sbjct: 481 TIEMRHAPFFGWIKDLSAPDPTNLFT----LFGLIPFDPTTLPLFGH----YLALGIWPI 532
Query: 278 LLVVSQYASMELMKPP 293
++ ++ + M+L P
Sbjct: 533 IMGITMWFQMKLNPTP 548
>gi|260893979|ref|YP_003240076.1| YidC/Oxa1 family membrane protein insertase [Ammonifex degensii
KC4]
gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii
KC4]
Length = 231
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 33/195 (16%)
Query: 101 GGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
G FG + M +L+ L A+ VP +YG AII+LT++V++ FPL +Q+ S +A+
Sbjct: 2 GELFGKLVTGMATLLEWLYKVTVAIGVP-NYGLAIIMLTILVRLVLFPLNYRQMRSVVAL 60
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q L PKIK +Q+RY + +++Q + LYR+ VNP+AGCLP L +P+ I LY+AL +
Sbjct: 61 QQLHPKIKELQERYKQDPQKLQQKLMELYREHNVNPMAGCLPLLIQLPILIALYRALLSF 120
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280
F W+PSLS T Y +LPVL
Sbjct: 121 PYTVAEHARFLWVPSLS------------------------------HTDPYFILPVLAG 150
Query: 281 VSQYASMELMKPPQA 295
V+ Y M++ PQA
Sbjct: 151 VTTYWQMKI--TPQA 163
>gi|420431183|ref|ZP_14930204.1| inner membrane protein oxaA [Helicobacter pylori Hp A-20]
gi|393044174|gb|EJB45168.1| inner membrane protein oxaA [Helicobacter pylori Hp A-20]
Length = 547
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
Length = 539
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHSLLSLIQGLVS------NWGIAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|326778144|ref|ZP_08237409.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces griseus
XylebKG-1]
gi|326658477|gb|EGE43323.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces griseus
XylebKG-1]
Length = 419
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS++A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIAS 129
>gi|429203892|ref|ZP_19195199.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces ipomoeae
91-03]
gi|428660573|gb|EKX60122.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces ipomoeae
91-03]
Length = 427
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAV---HVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ AV +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHKVYGAVFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANEGLL 226
AN +
Sbjct: 128 ANNDTI 133
>gi|386811365|ref|ZP_10098591.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386406089|dbj|GAB61472.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 565
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 9/142 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GW IS+A+ L +AVH V +YG +II+LT+++K+ FPLTKK S M
Sbjct: 337 GWLNAISKALLAFL-------NAVHRVLPNYGLSIIVLTILIKMILFPLTKKSQVSMFRM 389
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP I ++++Y +++R+ E L+++ G NP++GCLP + +PV+ L++ L +
Sbjct: 390 QQLQPMINQLKEKYKHDKQRMGKEQMLLFKKYGANPMSGCLPMVLQLPVFFALFRTL-QL 448
Query: 221 ANEGLLTEGFFWIPSLSGPTTI 242
+ E WI LS P T+
Sbjct: 449 SFEMRQAPFVLWINDLSRPDTL 470
>gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
6068]
gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
6068]
Length = 841
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 113 FVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQ 172
F+L+ + + I ++ +P +YG AIILLTVIV+ A P++ KQ +S MQ L P++ I++
Sbjct: 579 FILRSVLETIYSI-IP-NYGIAIILLTVIVRSAMIPVSLKQAKSAAMMQQLAPEMAKIKE 636
Query: 173 RYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS-NVA-NEGLLTEGF 230
+YA N E+ LY + NP GCLP +PV+IGLY+ LS ++ + L G
Sbjct: 637 KYADNMEKQSQAIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVDIELRDAALFPGI 696
Query: 231 FWIPSLSGPTT-------IAARQSGSGISWLLPFVDGHP 262
W +L+GP + + WL PF + P
Sbjct: 697 AWASNLAGPDKLFYWKDYVFSMMGDEANGWLGPFFNVFP 735
>gi|422844743|ref|ZP_16891453.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|325685110|gb|EGD27241.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 289
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSADGA--TQKNGGWFG--FISEAMEFVLKILKDGI 122
T+ LL LA V SG A T+ + + W+ + +FVL I K
Sbjct: 10 TKRLLAALALVTVFALVLSGCATQTTQKPMPISHNSSNWWDAWVVYYLSQFVLWIAKVCG 69
Query: 123 DAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----Q 178
SYG+AII+ TVI++V PL Q+ ST MQ +QP++KA+Q++Y+ +
Sbjct: 70 G------SYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEIQPELKALQEKYSSKDLETR 123
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
++ ET +LY++AGVNP AGCLP + +PV LYQA+
Sbjct: 124 NKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAI 162
>gi|182437489|ref|YP_001825208.1| inner membrane protein translocase component YidC [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178466005|dbj|BAG20525.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 419
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS++A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIAS 129
>gi|420473239|ref|ZP_14971917.1| inner membrane protein oxaA [Helicobacter pylori Hp H-19]
gi|393090367|gb|EJB91000.1| inner membrane protein oxaA [Helicobacter pylori Hp H-19]
Length = 550
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|92119160|ref|YP_578889.1| inner membrane protein translocase component YidC [Nitrobacter
hamburgensis X14]
gi|122416784|sp|Q1QH68.1|YIDC_NITHX RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14]
Length = 609
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L HV ++G AI+ +TV++K FPL + S M+
Sbjct: 356 GWFYFITKPMFLALDFF------FHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMK 409
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+I A+++R+ ++ ++Q E +Y++ +NP++GCLP + IPV+ LY+ L V
Sbjct: 410 AVQPQIAALKERFPDDKMKLQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLF-VT 468
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 469 IEMRHAPFFAWIKDLSAP 486
>gi|410462412|ref|ZP_11315993.1| membrane protein insertase (YidC/Oxa1) [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409984453|gb|EKO40761.1| membrane protein insertase (YidC/Oxa1) [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 532
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + +L D + +YG AIILLTV++K+ +PL++K +S M+
Sbjct: 320 GWFDFVAKPLIKLLHFFYDYVG------NYGVAIILLTVLIKLIFWPLSQKSYKSMDQMK 373
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + ++++Y +++++ E +LY+ VNP GCLP + IPV+ GLYQAL
Sbjct: 374 KLQPLLTQLREKYKDDRQKMNEEMMQLYKTYKVNPAGGCLPMIVQIPVFFGLYQAL 429
>gi|420464463|ref|ZP_14963234.1| inner membrane protein oxaA [Helicobacter pylori Hp H-4]
gi|393077692|gb|EJB78439.1| inner membrane protein oxaA [Helicobacter pylori Hp H-4]
Length = 545
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|440703099|ref|ZP_20884050.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
turgidiscabies Car8]
gi|440275401|gb|ELP63828.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
turgidiscabies Car8]
Length = 427
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ++ST AM
Sbjct: 8 FSFITTPVSWVIVQFHKVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 A 221
A
Sbjct: 128 A 128
>gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
Length = 428
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ++ST AM
Sbjct: 8 FSFITTPVSWVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 A 221
A
Sbjct: 128 A 128
>gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 544
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L + + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIASPLHKLLSFIHSIVG------NWGIAIIVLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 382 MLQPKIQAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLS 237
+ L FF WI LS
Sbjct: 440 SVELRHAPFFGWIHDLS 456
>gi|410448149|ref|ZP_11302235.1| 60Kd inner membrane protein [Leptospira sp. Fiocruz LV3954]
gi|410018048|gb|EKO80094.1| 60Kd inner membrane protein [Leptospira sp. Fiocruz LV3954]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|456877055|gb|EMF92100.1| 60Kd inner membrane protein [Leptospira santarosai str. ST188]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|334346494|ref|YP_004555046.1| membrane protein OxaA [Sphingobium chlorophenolicum L-1]
gi|334103116|gb|AEG50540.1| Membrane protein oxaA [Sphingobium chlorophenolicum L-1]
Length = 567
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 24/193 (12%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + I ++G AII LT +V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEKPIFALLHWLFEHIG------NFGVAIICLTFVVRGLMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y ++ ++Q E LY++ VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKMKALQEKYKDDKPKLQQEMMELYKREKVNPLAGCLPIFIQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLP 276
+ E WI LS P + + LLPF PP A+L VL
Sbjct: 447 LTIEMRHQPFVLWIKDLSAPDPLHILN----LFGLLPFT---PP-------AFLGIGVLA 492
Query: 277 VLLVVSQYASMEL 289
+LL +S Y +L
Sbjct: 493 LLLGISMYFQFKL 505
>gi|406891007|gb|EKD36747.1| hypothetical protein ACD_75C01388G0002 [uncultured bacterium]
Length = 501
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF I++ ++L +L D +YG AIIL+TV+ K A +P+++K ++S
Sbjct: 277 NFGWFDVIAKPTLWLLNLLYDYCR------NYGIAIILVTVLFKAAFWPISQKGMKSMKN 330
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQPK+ I+++Y + R+ E LY+ VNPL GCLP + IPV+ LY+ L
Sbjct: 331 MQKLQPKMVKIKEKYKSDPTRMNQEVMSLYKTYKVNPLGGCLPMVLQIPVFFALYKVLLQ 390
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL---LPFVDGHPPL 264
+ E WI LS P + WL +P++ G P L
Sbjct: 391 -SIELRHAPFMLWISDLSAPDRL----------WLGIDIPYLGGLPVL 427
>gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis
excentricus CB 48]
gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis
excentricus CB 48]
Length = 658
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 19/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G F F + M FVL L + ++G AI+ LTV+VK+ FPL K ES M+
Sbjct: 358 GMFWFFTRPMFFVLDFLFKYVG------NFGLAILGLTVLVKLIFFPLAHKSYESMTKMK 411
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP+++ +++++ GN +++Q+E LY++ VNP++GCLP +PV+ LY+ L V
Sbjct: 412 MLQPQVEELKKKHEGNPQQMQIEMMGLYQKEKVNPMSGCLPIFVQMPVFYALYKVLF-VT 470
Query: 222 NEGLLTEGFFWIPSLS--GPTTIAARQSGSGISWLLPFVDGHPPL--GWHDTAAYL-VLP 276
E F WI LS PTT+ + LLP+ P+ G T+ ++ +LP
Sbjct: 471 IEMRHAPFFGWIQDLSDKDPTTM------FNLFGLLPYDPAALPVIGGLMATSLHIGILP 524
Query: 277 VLLVVSQYASMELMKPP 293
+L S + S + M PP
Sbjct: 525 LLYGASMWLS-QSMNPP 540
>gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori HPKX_438_AG0C1]
Length = 546
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|421110839|ref|ZP_15571328.1| 60Kd inner membrane protein [Leptospira santarosai str. JET]
gi|410803744|gb|EKS09873.1| 60Kd inner membrane protein [Leptospira santarosai str. JET]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|421722381|ref|ZP_16161644.1| inner membrane protein oxaA [Helicobacter pylori R055a]
gi|407222838|gb|EKE92635.1| inner membrane protein oxaA [Helicobacter pylori R055a]
Length = 549
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 353 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 413 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 471
Query: 248 GSGISW 253
G+ + W
Sbjct: 472 GASMYW 477
>gi|422002746|ref|ZP_16349981.1| preprotein translocase, YidC subunit [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417258491|gb|EKT87878.1| preprotein translocase, YidC subunit [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|443287907|ref|ZP_21027002.1| cytoplasmic insertase into membrane protein, Sec system
[Micromonospora lupini str. Lupac 08]
gi|385881994|emb|CCH22095.1| cytoplasmic insertase into membrane protein, Sec system
[Micromonospora lupini str. Lupac 08]
Length = 330
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L DA+ VP +++ AI+ L V V+V FP+ KQ++S
Sbjct: 5 WIYFAISWILLTWHSAWDAIGVPVDAVIGTNFAWILAIVFLVVSVRVILFPVFVKQIKSQ 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQPK+K +Q+++ G++E +Q E LYR+ NPL GCLP IPV++GL+ L
Sbjct: 65 RAMQALQPKVKELQEKHKGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVL 124
Query: 218 SNV 220
+
Sbjct: 125 RRL 127
>gi|418746189|ref|ZP_13302520.1| 60Kd inner membrane protein [Leptospira santarosai str. CBC379]
gi|418752899|ref|ZP_13309155.1| 60Kd inner membrane protein [Leptospira santarosai str. MOR084]
gi|409966582|gb|EKO34423.1| 60Kd inner membrane protein [Leptospira santarosai str. MOR084]
gi|410793020|gb|EKR90944.1| 60Kd inner membrane protein [Leptospira santarosai str. CBC379]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|389810733|ref|ZP_10205998.1| membrane protein insertase [Rhodanobacter thiooxydans LCS2]
gi|388440593|gb|EIL96955.1| membrane protein insertase [Rhodanobacter thiooxydans LCS2]
Length = 578
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 38 STRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGAT 97
S R + + P LS+ L S +S LY + ++D+ + G T
Sbjct: 311 SAHPRYLIRTVGPALSVAPGQSLTS-----QSRLYVGPNKQGTMDAVAPGLDLTI----- 360
Query: 98 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
+ G F I+ M +VL + ++G AIILL +++K ++ LT Q S+
Sbjct: 361 --DYGMFKIIAVPMHWVLSQFH------AITKNWGVAIILLVLLIKGLSWKLTAIQYRSS 412
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQP+++A+++RY +++++Q+ LY++ VNP+ GCLP L T+PV+ GL+ L
Sbjct: 413 ARMRKLQPRVQALKERYGDDKQKMQMAMMELYKKEKVNPMGGCLPVLITLPVFYGLFFVL 472
Query: 218 SNVANEGLLTEGFFWIPSLSGPT-----TIAARQSGSGISWLLPFVDGHPPLGWHDTAAY 272
L F WIP LS P I G WL P G P T A
Sbjct: 473 EYSLE--LRHAPFLWIPDLSAPDPFYILPIIYALVMLGTQWLNPVAAGMDP-----TQAK 525
Query: 273 L--VLPVLLVV 281
+ V+P+L V
Sbjct: 526 MMKVMPLLFTV 536
>gi|359684451|ref|ZP_09254452.1| preprotein translocase, YidC subunit [Leptospira santarosai str.
2000030832]
Length = 620
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG++II+ ++ K+ +PL +KQ +S MQ L P++K I +++A + + Q +T LY
Sbjct: 415 NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELY 474
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
++ VNP+ GCLP + IP++I LY A S+ + L F W+ LS P I
Sbjct: 475 KKNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI 525
>gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78]
gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78]
Length = 447
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 103 WFGFISEAMEFVL---KILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
WF FI+ + +V+ L I +++G +I+ L +I+++ PL KQ+++T A
Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQP++K IQ+RY +++R E +LY+++G NPL+ CLP L P + LY L
Sbjct: 67 MQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVLDG 126
Query: 220 VANE 223
+A+
Sbjct: 127 IASN 130
>gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC
[Borrelia burgdorferi 80a]
gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
Length = 544
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
OhILAs]
gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
OhILAs]
Length = 220
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 21/140 (15%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG +IIL T++ K+ T PLT KQ +S MQ +QPK+K +Q++Y + E++ ++T LY
Sbjct: 21 NYGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKKLQEKYKNDPEQLNIKTMELY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQAL---------SNVANEGLLTEGFFWIPSLSGPT 240
++ V+P GCLP L P+ IGL+ A+ S A E + T F W+P+L
Sbjct: 81 KEHNVSPFGGCLPLLIQFPIIIGLFAAVREPGTYVFGSQAAYEAINT-SFLWLPNL---- 135
Query: 241 TIAARQSGSGISWLLPFVDG 260
T+A W+LP + G
Sbjct: 136 TVAD-------PWILPILAG 148
>gi|15646059|ref|NP_208241.1| inner membrane protein translocase component YidC [Helicobacter
pylori 26695]
gi|410024688|ref|YP_006893941.1| membrane protein insertase [Helicobacter pylori Rif1]
gi|410502453|ref|YP_006936980.1| membrane protein insertase [Helicobacter pylori Rif2]
gi|410682972|ref|YP_006935374.1| membrane protein insertase [Helicobacter pylori 26695]
gi|38502836|sp|O25989.1|YIDC_HELPY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695]
gi|409894613|gb|AFV42671.1| membrane protein insertase [Helicobacter pylori 26695]
gi|409896345|gb|AFV44267.1| membrane protein insertase [Helicobacter pylori Rif1]
gi|409898004|gb|AFV45858.1| membrane protein insertase [Helicobacter pylori Rif2]
Length = 547
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 351 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 410
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 411 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 469
Query: 248 GSGISW 253
G+ + W
Sbjct: 470 GASMYW 475
>gi|157737856|ref|YP_001490540.1| inner membrane protein translocase component YidC [Arcobacter
butzleri RM4018]
gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018]
Length = 533
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L+ L+ I ++G+ I+ LT++VKV +PL+ K + S ++
Sbjct: 321 GWFTFIAKPMFVLLQFLQSYIG------NWGWTIVALTILVKVVLYPLSYKGMVSMQKLK 374
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K IQ +Y ++++ + LY++ G NP+ GCLP + IP++ +Y+ L N A
Sbjct: 375 DLAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLIN-A 433
Query: 222 NEGLLTEGFFWIPSLSG 238
E E FWI L+
Sbjct: 434 IELKGAEWIFWIHDLAA 450
>gi|456387105|gb|EMF52618.1| hypothetical protein SBD_5694 [Streptomyces bottropensis ATCC
25435]
Length = 426
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 66/98 (67%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL 226
Y++ G NPL+ CLP LA P + LY L+++AN +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTI 133
>gi|238061909|ref|ZP_04606618.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149]
gi|237883720|gb|EEP72548.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149]
Length = 327
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L DA+ VP +++ AI+ L V V+V FP+ KQ++S
Sbjct: 6 WIYYAISWILLTWHSAWDAIGVPVDAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQ 65
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQP++K +Q+++ G++E +Q E LYR+ NPL GCLP IPV++GL+ L
Sbjct: 66 RAMQALQPRVKELQEKHKGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVL 125
Query: 218 SNV 220
+
Sbjct: 126 RRL 128
>gi|145301204|ref|YP_001144045.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362530|ref|ZP_12963160.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|166975848|sp|A4STS5.1|YIDC_AERS4 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|142853976|gb|ABO92297.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686223|gb|EHI50830.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 548
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + + +++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFQGFV------HNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R++ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKLAALKERFSDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|15603927|ref|NP_220442.1| inner membrane protein translocase component YidC [Rickettsia
prowazekii str. Madrid E]
gi|383486903|ref|YP_005404583.1| membrane protein insertase [Rickettsia prowazekii str. GvV257]
gi|383487477|ref|YP_005405156.1| membrane protein insertase [Rickettsia prowazekii str. Chernikova]
gi|383488323|ref|YP_005406001.1| membrane protein insertase [Rickettsia prowazekii str. Katsinyian]
gi|383489167|ref|YP_005406844.1| membrane protein insertase [Rickettsia prowazekii str. Dachau]
gi|383499301|ref|YP_005412662.1| membrane protein insertase [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500142|ref|YP_005413502.1| membrane protein insertase [Rickettsia prowazekii str. RpGvF24]
gi|386081881|ref|YP_005998458.1| Preprotein translocase subunit YidC [Rickettsia prowazekii str.
Rp22]
gi|38503265|sp|Q9ZE97.1|YIDC_RICPR RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii str.
Madrid E]
gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii str.
Rp22]
gi|380757268|gb|AFE52505.1| membrane protein insertase [Rickettsia prowazekii str. GvV257]
gi|380757839|gb|AFE53075.1| membrane protein insertase [Rickettsia prowazekii str. RpGvF24]
gi|380760356|gb|AFE48878.1| membrane protein insertase [Rickettsia prowazekii str. Chernikova]
gi|380761202|gb|AFE49723.1| membrane protein insertase [Rickettsia prowazekii str. Katsinyian]
gi|380762047|gb|AFE50567.1| membrane protein insertase [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762890|gb|AFE51409.1| membrane protein insertase [Rickettsia prowazekii str. Dachau]
Length = 560
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGISILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYNNDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E F WI LS PTTI + LLPF PP A +++ + +
Sbjct: 451 IEMRQAPFFGWIKDLSSPDPTTIF------NLFGLLPFA---PPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S EL P QA+
Sbjct: 502 FLHQKMSPELADPIQAQ 518
>gi|420469713|ref|ZP_14968424.1| inner membrane protein oxaA [Helicobacter pylori Hp H-11]
gi|393086759|gb|EJB87429.1| inner membrane protein oxaA [Helicobacter pylori Hp H-11]
Length = 548
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
Length = 646
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M +VL L I + G AII LT+++KV FPL K S M+
Sbjct: 347 GWFFFLTKPMFWVLHNLNALIG------NMGLAIIGLTLVLKVIVFPLAYKSYVSMARMK 400
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP+I+A+++R +++++Q+E +LY++ VNP AGCLP L IP++ LY+ +
Sbjct: 401 ELQPEIEAMKERVGDDKQKVQVEMMKLYKEKKVNPAAGCLPVLIQIPIFFSLYKVI 456
>gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. SA3_actG]
gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. SA3_actF]
Length = 447
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 103 WFGFISEAMEFVL---KILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
WF FI+ + +V+ L I +++G +I+ L +I+++ PL KQ+++T A
Sbjct: 7 WFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKATRA 66
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQP++K IQ+RY +++R E +LY+++G NPL+ CLP L P + LY L
Sbjct: 67 MQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVLDG 126
Query: 220 VANE 223
+A+
Sbjct: 127 IASN 130
>gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
Length = 544
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor
sp. SB155-2]
gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 528
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 75/118 (63%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+F FI++ M K + H+ ++G+AI++LT+I+++ FPLT K + S ++
Sbjct: 313 GFFTFIAKPM------FKALLALYHLIGNWGWAIVVLTIIIRIILFPLTLKGMLSMQKLK 366
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
+L PKIK +QQ+Y G+ +++ +LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 367 DLAPKIKELQQKYKGDPQKLNAHMMQLYKKHGANPMGGCLPMLLQIPVFFAIYRVLLN 424
>gi|386746866|ref|YP_006220083.1| membrane protein insertase [Helicobacter pylori HUP-B14]
gi|384553115|gb|AFI08063.1| membrane protein insertase [Helicobacter pylori HUP-B14]
Length = 548
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKNSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
Length = 539
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHTLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWITDLSA 456
>gi|38502849|sp|O51398.1|YIDC_BORBU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
Length = 544
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|419417260|ref|ZP_13957728.1| membrane protein insertase [Helicobacter pylori P79]
gi|384373429|gb|EIE28917.1| membrane protein insertase [Helicobacter pylori P79]
Length = 547
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 351 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 410
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 411 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 469
Query: 248 GSGISW 253
G+ + W
Sbjct: 470 GASMYW 475
>gi|420444468|ref|ZP_14943389.1| membrane protein oxaA [Helicobacter pylori Hp H-41]
gi|393058448|gb|EJB59339.1| membrane protein oxaA [Helicobacter pylori Hp H-41]
Length = 547
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|383637349|ref|ZP_09950755.1| putative inner membrane protein translocase component YidC
[Streptomyces chartreusis NRRL 12338]
Length = 424
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANEGLL 226
A+ +
Sbjct: 128 ASNDTI 133
>gi|336122803|ref|YP_004564851.1| 60 kDa inner membrane protein [Vibrio anguillarum 775]
gi|335340526|gb|AEH31809.1| 60 kDa inner membrane protein [Vibrio anguillarum 775]
Length = 540
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHMLLSFIQSFVS------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP +P++I LY +L +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIFLQMPIFIALYWSL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
gi|387827350|ref|YP_005806632.1| inner membrane protein OxaA [Borrelia burgdorferi N40]
gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40]
Length = 544
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|406912965|gb|EKD52464.1| 60 kDa inner membrane insertion protein [uncultured bacterium]
Length = 565
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I+ + ++ L I S+G II LT IVK+ P KK ++S AMQ
Sbjct: 342 GWFSIIAVLILKLMSFLHRFIP------SWGLTIITLTFIVKMLLHPFNKKSMQSMKAMQ 395
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
NLQPK+ I+++Y ++++ ET +L+R VNP+ GCLP L PV+I LY+ L N
Sbjct: 396 NLQPKLNEIKKKYGDDKQKQNEETMQLFRTHKVNPMGGCLPMLLQFPVYIALYKVLWN 453
>gi|302559670|ref|ZP_07312012.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000]
gi|302477288|gb|EFL40381.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000]
Length = 424
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ AV P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANEGLL 226
A+ +
Sbjct: 128 ASNDTI 133
>gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
Length = 544
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
gi|254772749|sp|B7J208.1|YIDC_BORBZ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
Length = 544
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|323487690|ref|ZP_08092948.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2]
gi|323398424|gb|EGA91212.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2]
Length = 259
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
+YGF II +T+I+++ PL KQ +S+ MQ +QP++ ++++Y A Q++ Q E
Sbjct: 57 TYGFGIIAVTIIIRLVMLPLMVKQTKSSKRMQEVQPELVKLKEKYKSKDAVTQQKYQKEM 116
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAAR 245
L+++ GVNP+AGCLP + +PV IG Y A+S + N + G F I L+ P+ I A
Sbjct: 117 MALFQEKGVNPMAGCLPVVIQMPVLIGFYHAISRMNNTPEIDLGSFLIFPLAEPSIILAV 176
Query: 246 QSG 248
+G
Sbjct: 177 IAG 179
>gi|15612408|ref|NP_224061.1| inner membrane protein translocase component YidC [Helicobacter
pylori J99]
gi|38503266|sp|Q9ZJG8.1|YIDC_HELPJ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99]
Length = 549
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|389784092|ref|ZP_10195289.1| membrane protein insertase [Rhodanobacter spathiphylli B39]
gi|388433849|gb|EIL90808.1| membrane protein insertase [Rhodanobacter spathiphylli B39]
Length = 575
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 15/173 (8%)
Query: 67 TESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVH 126
+ES LY + ++D+ + G T + G F I+ M +VL
Sbjct: 332 SESRLYVGPNRQGTMDAIAPGLDLTI-------DYGMFKIIAVPMHWVLSQFH------A 378
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+ ++G AIILL +++K ++ LT Q S+ M+ LQP+++A+++RY +++++Q
Sbjct: 379 ITKNWGVAIILLVLLIKGLSWKLTAIQYRSSARMRKLQPRVQALKERYGDDKQKMQTAMM 438
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
LY++ VNP+ GCLP L T+PV+ GLY L L F WIP LS P
Sbjct: 439 ELYKKEKVNPMGGCLPVLITMPVFYGLYFVLEYSLE--LHHSPFLWIPDLSAP 489
>gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
KIST612]
gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
KIST612]
Length = 307
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG A+IL T++VK PL KQ +S MQ LQP+++ +Q++Y N E++ ET +LY
Sbjct: 21 NYGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQKLQKKYKNNPEKLNQETMKLY 80
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN----VANEG---LLTEGFFWIPSLSGP 239
+ V+P+AGCLP L +P+ L+ AL + V G +++ F WIP L P
Sbjct: 81 KLYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNGDVSAISQQFLWIPDLGNP 137
>gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC
[Campylobacter curvus 525.92]
gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92]
Length = 518
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 304 GWFTFIAKPMFAFLDFLHKYIG------NWGWAIVVLTLVIRIILFPLTYKGMLSMNKLK 357
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
L PK+K IQ +Y G+ +++ LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 358 ELAPKVKEIQAKYKGDPQKLNTHMMELYKKNGANPMGGCLPILLQIPVFFAIYRVLLN 415
>gi|365540375|ref|ZP_09365550.1| membrane protein insertase [Vibrio ordalii ATCC 33509]
Length = 540
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHMLLSFIQSFVS------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP +P++I LY +L +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIFLQMPIFIALYWSL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|260890876|ref|ZP_05902139.1| stage III sporulation protein J [Leptotrichia hofstadii F0254]
gi|260859429|gb|EEX73929.1| stage III sporulation protein J [Leptotrichia hofstadii F0254]
Length = 228
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
Query: 107 ISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
I ++FV+ +L +A++ V +YG AII++T+++++ FPL KQ ++ M+ LQP
Sbjct: 4 IQALVDFVVHVL----NAIYGVVGNYGVAIIIVTILMRIIVFPLALKQEKAMKKMKELQP 59
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+++ I+++Y N + Q +T+ LYR++G NPLAGCLP L +PV++ LY A S A
Sbjct: 60 ELEKIKEKYKDNPQEYQRKTAELYRESGANPLAGCLPLLIQMPVFVALYWAFSGNA 115
>gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
Length = 544
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|402548074|ref|ZP_10844938.1| membrane protein insertase, YidC/Oxa1 family [Campylobacter sp.
FOBRC14]
gi|401015561|gb|EJP74339.1| membrane protein insertase, YidC/Oxa1 family [Campylobacter sp.
FOBRC14]
Length = 518
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L L I ++G+AI++LT+++++ FPLT K + S ++
Sbjct: 304 GWFTFIAKPMFAFLDFLHKYIG------NWGWAIVVLTLVIRIILFPLTYKGMLSMNKLK 357
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
L PK+K IQ +Y G+ +++ LY++ G NP+ GCLP L IPV+ +Y+ L N
Sbjct: 358 ELAPKVKEIQAKYKGDPQKLNTHMMELYKKNGANPMGGCLPILLQIPVFFAIYRVLLN 415
>gi|332800544|ref|YP_004462043.1| YidC/Oxa1 family membrane protein insertase [Tepidanaerobacter
acetatoxydans Re1]
gi|438003953|ref|YP_007273696.1| Inner membrane protein translocase component YidC, short form
OxaI-like [Tepidanaerobacter acetatoxydans Re1]
gi|332698279|gb|AEE92736.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter
acetatoxydans Re1]
gi|432180747|emb|CCP27720.1| Inner membrane protein translocase component YidC, short form
OxaI-like [Tepidanaerobacter acetatoxydans Re1]
Length = 209
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Query: 111 MEFVLKILKDGIDAVHV-PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKA 169
M F+ ++K +D + V SYG AIILLTV++K+ P + Q+ S MQ + P +
Sbjct: 1 MAFLQDLMKQLMDLIFVYTNSYGIAIILLTVLIKLILLPFSFMQINSMKKMQEITPLQQE 60
Query: 170 IQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEG 229
+Q++Y ++E++ +E +LY++ +NP+ GCLP L PV I L++ G
Sbjct: 61 LQKKYKNDKEKLNMEIMKLYQENKINPMGGCLPLLIQFPVIIALFRVFQTYDFAG---AS 117
Query: 230 FFWIPSLSGPTT 241
F WI +LS P +
Sbjct: 118 FLWISNLSKPDS 129
>gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
Length = 568
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 41/170 (24%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERI--QLETSR 187
++G+AII+LT+IVK FPL +K +S M+++QPK++A++++Y ++R+ Q E +
Sbjct: 359 NWGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEALKKKYPNPEDRMAMQQELMK 418
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LYR +NPL GCLP L +P++IGLY W+ LS + RQ+
Sbjct: 419 LYRDEKINPLGGCLPMLIQMPIFIGLY-----------------WMIFLS----VELRQA 457
Query: 248 GSGISWLLPFVDGHPPLGW-HDTAA---YLVLPVLLVVSQYASMELMKPP 293
P LGW HD + + +LP+L+ V+ Y ++ PP
Sbjct: 458 --------------PWLGWIHDLSRPDPFYILPILMAVTMYLQTKMSPPP 493
>gi|421709230|ref|ZP_16148590.1| inner membrane protein oxaA [Helicobacter pylori R018c]
gi|421722487|ref|ZP_16161746.1| inner membrane protein oxaA [Helicobacter pylori R056a]
gi|407211787|gb|EKE81652.1| inner membrane protein oxaA [Helicobacter pylori R018c]
gi|407226271|gb|EKE96037.1| inner membrane protein oxaA [Helicobacter pylori R056a]
Length = 546
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420416006|ref|ZP_14915119.1| inner membrane protein oxaA [Helicobacter pylori NQ4053]
gi|393031911|gb|EJB32982.1| inner membrane protein oxaA [Helicobacter pylori NQ4053]
Length = 548
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIYDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|343499273|ref|ZP_08737256.1| membrane protein insertase [Vibrio tubiashii ATCC 19109]
gi|418479448|ref|ZP_13048530.1| membrane protein insertase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342823148|gb|EGU57804.1| membrane protein insertase [Vibrio tubiashii ATCC 19109]
gi|384572959|gb|EIF03463.1| membrane protein insertase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 539
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHSLLSFIQGFVS------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1]
gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1]
Length = 537
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+FG + + + ++ + D I +++G II+LTV++++ FPL K +++ M
Sbjct: 328 GFFGILGKPLFLIMHFIYDYI------HNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMA 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L P+IK +Q++Y + +++Q E +LY + G NP++GCLP +A IP++I LY L
Sbjct: 382 DLAPEIKKLQKKYQKDPQKLQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTV 441
Query: 222 NEGLLTEGFFWIPSLS 237
++ F W+ L+
Sbjct: 442 ELKMVP--FLWVQDLA 455
>gi|451947365|ref|YP_007467960.1| protein translocase subunit yidC [Desulfocapsa sulfexigens DSM
10523]
gi|451906713|gb|AGF78307.1| protein translocase subunit yidC [Desulfocapsa sulfexigens DSM
10523]
Length = 550
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 31 LPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLL-YTLADAAVSLDSASGGAA 89
LP + A++ SF E + ++S DL+++ E + Y L LD
Sbjct: 267 LPQDKSATSLTMASFGEDGVKMQMNS--DLDTLQPGEEKVYSYKLFFGPKKLDVLK---- 320
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
S ++ N GWF I++ ++L + +YG AIIL+T+I K +P+
Sbjct: 321 SIGSNLNKAVNFGWFDVIAQPTLYLLNFF------YGIVKNYGIAIILVTIIFKAIFWPI 374
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
T+K ++S MQ LQPK+ ++++Y G+ ++ E LY+ VNPL GCLP + IPV
Sbjct: 375 TQKGLKSMKNMQKLQPKMAKLKEKYKGDPTKMNQEVMNLYKTYKVNPLGGCLPMVLQIPV 434
Query: 210 WIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPL 264
+ LY+ L + E WI LS P + GI +P+V G P L
Sbjct: 435 FFALYKVLL-MCIELRHAPFMLWITDLSAPDRLFI-----GID--IPYVGGIPVL 481
>gi|75677253|ref|YP_319674.1| inner membrane protein translocase component YidC [Nitrobacter
winogradskyi Nb-255]
gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255]
Length = 614
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L HV ++G +I+++TV++K+ FPL + S M+
Sbjct: 360 GWFYFITKPMFLALDFF------FHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMK 413
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+I A+++ Y ++ ++Q E +Y++ +NP++GCLP L IPV+ LY+ L V
Sbjct: 414 AIQPQINALRELYPDDRMKLQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLF-VT 472
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 473 IEMRHAPFFAWIKDLSAP 490
>gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium
japonicum USDA 110]
gi|38502983|sp|Q89BQ0.1|YIDC_BRAJA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110]
Length = 616
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 369 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 421
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 422 KSIQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 480
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E + WI LS P
Sbjct: 481 TIEMRQAPFYGWIKDLSAP 499
>gi|443626041|ref|ZP_21110473.1| putative inner membrane protein translocase component YidC
[Streptomyces viridochromogenes Tue57]
gi|443340465|gb|ELS54675.1| putative inner membrane protein translocase component YidC
[Streptomyces viridochromogenes Tue57]
Length = 427
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 104 FGFISEAMEFVLKILKDGIDAV---HVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ + +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHKVYGALFGDNTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANE---GLLTE 228
AN G++ E
Sbjct: 128 ANHETVGVINE 138
>gi|375335444|ref|ZP_09776788.1| inner membrane protein oxaA [Succinivibrionaceae bacterium WG-1]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS + LK + G+ +++ ++G AII+LT V+ +PLTKKQ S M+
Sbjct: 77 GWLSFISVFLFKCLKWIYAGLSYLNIA-NWGLAIIILTFCVRGLMYPLTKKQYVSMAKMR 135
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
L PK+ +++RY +++R+ +E LY++ NPL GCLP L +P++I LY L
Sbjct: 136 LLAPKLNELKERYKNDRQRLSMEMMELYKRENANPLGGCLPLLIQMPIFIALYWTL 191
>gi|345000864|ref|YP_004803718.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces sp.
SirexAA-E]
gi|344316490|gb|AEN11178.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces sp.
SirexAA-E]
Length = 423
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVL---KILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ L I +++G +I+ L V++++ PL KQ++ST M
Sbjct: 8 FSFITTPVSWVIVQFHKLYGAIFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LS +
Sbjct: 68 QVLQPKMKAIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSAI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio
splendidus 12B01]
gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio
splendidus 12B01]
Length = 540
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHTLLSFIQ------GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIILQMPIFISLYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWITDLSA 457
>gi|254779961|ref|YP_003058068.1| inner membrane protein translocase component YidC [Helicobacter
pylori B38]
gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane
protein; putative signal peptide [Helicobacter pylori
B38]
Length = 546
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|338708463|ref|YP_004662664.1| membrane protein insertase, YidC/Oxa1 family [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
gi|336295267|gb|AEI38374.1| membrane protein insertase, YidC/Oxa1 family [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 580
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY + +++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDDAKMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGH 261
V E WI LS P + + + LLPF H
Sbjct: 448 VTIESRHQPFIGWIKDLSAPDPL----TPFNLFGLLPFTPPH 485
>gi|352518726|ref|YP_004888043.1| membrane protein OxaA1 [Tetragenococcus halophilus NBRC 12172]
gi|348602833|dbj|BAK95879.1| membrane protein OxaA1 [Tetragenococcus halophilus NBRC 12172]
Length = 280
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
Query: 88 AASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A + + + ++ G W +I V++ L G + G IIL T+IV++ F
Sbjct: 22 ACAMTNEVTSESTGFWDRYIVYTFAQVIQWLSLGGNR-------GIGIILFTIIVRIILF 74
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLYRQAGVNPLAGCLPT 203
PL Q +S Q +QPKI A+Q++Y+ Q++++ E +LY++ GVNP AGCLP
Sbjct: 75 PLMNFQTKSMRKTQEVQPKITALQEKYSSKDTETQQKLREEQQKLYQEHGVNPYAGCLPL 134
Query: 204 LATIPVWIGLYQALSNVANEGLLTEG-FFWIPSLSGP 239
L +P+ + +YQA+S V L EG F W+ L P
Sbjct: 135 LVQMPILMAVYQAISRVPE---LREGSFLWLRVLGEP 168
>gi|255994567|ref|ZP_05427702.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum
ATCC 49989]
gi|255993280|gb|EEU03369.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum
ATCC 49989]
Length = 240
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 18/138 (13%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG +ILLT+IVK+ TFPL K Q+ +TL M LQPK+K IQ R+ ++ + + LY
Sbjct: 25 NYGVTLILLTLIVKLVTFPLYKSQMLNTLKMAELQPKMKDIQARFGHDKALLGAKMQELY 84
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQA----LSNVANEGLL---TEGFFWIPSLSGPTTI 242
++ NP GCLP L +P+ GL+ LS ++++ L+ E F WI LS P
Sbjct: 85 KEEKYNPAGGCLPMLIQMPIIFGLFSLLRDPLSYISDQQLIFAVHEPFLWIADLSHPD-- 142
Query: 243 AARQSGSGISWLLPFVDG 260
W+LP + G
Sbjct: 143 ---------KWILPILAG 151
>gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
gi|254772753|sp|B5RRP5.1|YIDC_BORRA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
Length = 545
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 17/157 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E +LY
Sbjct: 340 NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMGKLY 399
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+ GVNP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 400 REEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GD 450
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYAS 286
I + G+ W D +LP +++++Q S
Sbjct: 451 SIYYF-----GYKVFAWTDIR---ILPFIMMITQLLS 479
>gi|420411184|ref|ZP_14910316.1| inner membrane protein oxaA [Helicobacter pylori NQ4228]
gi|393029973|gb|EJB31052.1| inner membrane protein oxaA [Helicobacter pylori NQ4228]
Length = 555
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 359 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 418
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 419 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 477
Query: 248 GSGISW 253
G+ + W
Sbjct: 478 GASMYW 483
>gi|403068963|ref|ZP_10910295.1| stage III sporulation protein J [Oceanobacillus sp. Ndiop]
Length = 254
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
SYG +I+++T++++ PL KQV+S+ AMQ +QP++K IQ++Y A Q+++Q ET
Sbjct: 58 SYGLSIVIVTILIRTLLMPLNVKQVKSSKAMQEIQPELKEIQKKYSSKDANTQQKLQQET 117
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW 232
L+++ GVNPLAGCLP +P+ I +Y A+ + + + + F W
Sbjct: 118 MELFQKNGVNPLAGCLPIFIQMPILIAMYHAI--MRTDEINSYSFLW 162
>gi|408530733|emb|CCK28907.1| Membrane protein oxaA [Streptomyces davawensis JCM 4913]
Length = 418
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 65/95 (68%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
Y++ G NPL+ CLP LA P + LY L+++AN
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANN 130
>gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
Length = 448
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 236 GWLWFIAKPLHSLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 289
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 290 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESV 349
Query: 222 NEGLLTEGFF-WIPSLS 237
L FF WI LS
Sbjct: 350 E--LRHSPFFGWIHDLS 364
>gi|456014408|gb|EMF48021.1| putative inner membrane protein translocase [Planococcus
halocryophilus Or1]
Length = 259
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
+YGF II +T+I+++ PL KQ +S+ MQ +QP++ ++++Y A Q++ Q E
Sbjct: 57 TYGFGIIAVTIIIRLVMLPLMIKQTKSSKRMQEVQPELVKLKEKYKSKDAVTQQKYQKEM 116
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAAR 245
L+++ GVNP+AGCLP + +PV IG Y A+S + N + G F I L+ P+ I A
Sbjct: 117 MALFQEKGVNPMAGCLPVVIQMPVLIGFYHAISRMNNTPEIDLGAFLIFPLAEPSIILAV 176
Query: 246 QSG 248
+G
Sbjct: 177 IAG 179
>gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|417954331|ref|ZP_12597368.1| membrane protein insertase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|342815599|gb|EGU50514.1| membrane protein insertase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 541
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHTLLSFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|158425677|ref|YP_001526969.1| inner membrane protein translocase component YidC [Azorhizobium
caulinodans ORS 571]
gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571]
Length = 607
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 18/197 (9%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF FI++ + V+ + + ++G AI+++TV++K FPL K S
Sbjct: 355 DWGWFYFITKPLFLVIDWIYKLVG------NFGVAILIVTVLLKGIFFPLANKSYASMAK 408
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP++ AI++RYA ++ + Q T LY++ +NP+AGCLP L IPV+ LY+ L
Sbjct: 409 MKALQPEMMAIRERYADDKVKQQQATMELYKKEKINPVAGCLPILIQIPVFFALYKVLF- 467
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
V E F WI LS P I W V P LG YL+L P
Sbjct: 468 VTIEMRQAPFFGWIHDLSAPDPTTVFNLFGLIPWDPSVV---PVLG-----PYLMLGAWP 519
Query: 277 VLLVVSQYASMELMKPP 293
+++ V+ + M+L P
Sbjct: 520 LIMGVTMWVQMKLNPAP 536
>gi|420459234|ref|ZP_14958036.1| inner membrane protein oxaA [Helicobacter pylori Hp A-26]
gi|393071924|gb|EJB72704.1| inner membrane protein oxaA [Helicobacter pylori Hp A-26]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|357412377|ref|YP_004924113.1| insertase [Streptomyces flavogriseus ATCC 33331]
gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
flavogriseus ATCC 33331]
Length = 418
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L V++++ PL KQ++ST MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++ G NPL+ CLP LA P + LY LS +A+
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSAIAS 129
>gi|420447735|ref|ZP_14946621.1| inner membrane protein oxaA [Helicobacter pylori Hp H-43]
gi|393061796|gb|EJB62656.1| inner membrane protein oxaA [Helicobacter pylori Hp H-43]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|385811779|ref|YP_005848175.1| preprotein translocase subunit YidC [Ignavibacterium album JCM
16511]
gi|383803827|gb|AFH50907.1| Preprotein translocase subunit YidC [Ignavibacterium album JCM
16511]
Length = 615
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YGF II+ ++I+K+A +PLTK+ +S MQ LQPKI ++++Y + +++ ET +LY
Sbjct: 384 NYGFVIIIFSLIIKLAVYPLTKQSYQSMKKMQALQPKIAELKEKYKDDPQKLNSETMKLY 443
Query: 190 RQAGVNPLAGCLPTLATIPVWI---GLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
G+NP GCLP L +P++I G++Q++ + + + +WI LS P I
Sbjct: 444 STYGINPAGGCLPILLQMPIFIALWGMFQSVIELRQQPFV----WWIKDLSTPDVI 495
>gi|423204663|ref|ZP_17191219.1| inner membrane protein oxaA [Aeromonas veronii AMC34]
gi|404625987|gb|EKB22798.1| inner membrane protein oxaA [Aeromonas veronii AMC34]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKIAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|423202977|ref|ZP_17189555.1| inner membrane protein oxaA [Aeromonas veronii AER39]
gi|404614233|gb|EKB11236.1| inner membrane protein oxaA [Aeromonas veronii AER39]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKIAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|330831724|ref|YP_004394676.1| inner membrane protein oxaA [Aeromonas veronii B565]
gi|406675054|ref|ZP_11082245.1| inner membrane protein oxaA [Aeromonas veronii AMC35]
gi|423211633|ref|ZP_17198166.1| inner membrane protein oxaA [Aeromonas veronii AER397]
gi|328806860|gb|AEB52059.1| Inner membrane protein oxaA [Aeromonas veronii B565]
gi|404613292|gb|EKB10325.1| inner membrane protein oxaA [Aeromonas veronii AER397]
gi|404628192|gb|EKB24978.1| inner membrane protein oxaA [Aeromonas veronii AMC35]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKIAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|420467761|ref|ZP_14966510.1| inner membrane protein oxaA [Helicobacter pylori Hp H-9]
gi|393083021|gb|EJB83735.1| inner membrane protein oxaA [Helicobacter pylori Hp H-9]
Length = 546
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420432993|ref|ZP_14932002.1| membrane protein oxaA [Helicobacter pylori Hp H-24]
gi|420508492|ref|ZP_15006998.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24b]
gi|420510092|ref|ZP_15008588.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24c]
gi|420532185|ref|ZP_15030548.1| membrane protein oxaA [Helicobacter pylori Hp M1]
gi|420535474|ref|ZP_15033819.1| membrane protein oxaA [Helicobacter pylori Hp M2]
gi|420535557|ref|ZP_15033899.1| membrane protein oxaA [Helicobacter pylori Hp M3]
gi|420537259|ref|ZP_15035589.1| membrane protein oxaA [Helicobacter pylori Hp M4]
gi|420538989|ref|ZP_15037308.1| membrane protein oxaA [Helicobacter pylori Hp M5]
gi|420540747|ref|ZP_15039055.1| membrane protein oxaA [Helicobacter pylori Hp M6]
gi|420543816|ref|ZP_15042105.1| membrane protein oxaA [Helicobacter pylori Hp M9]
gi|393051861|gb|EJB52811.1| membrane protein oxaA [Helicobacter pylori Hp H-24]
gi|393115284|gb|EJC15795.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24b]
gi|393116619|gb|EJC17124.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24c]
gi|393139759|gb|EJC40133.1| membrane protein oxaA [Helicobacter pylori Hp M2]
gi|393139816|gb|EJC40189.1| membrane protein oxaA [Helicobacter pylori Hp M1]
gi|393143205|gb|EJC43549.1| membrane protein oxaA [Helicobacter pylori Hp M3]
gi|393144814|gb|EJC45145.1| membrane protein oxaA [Helicobacter pylori Hp M4]
gi|393146674|gb|EJC46999.1| membrane protein oxaA [Helicobacter pylori Hp M5]
gi|393147367|gb|EJC47691.1| membrane protein oxaA [Helicobacter pylori Hp M6]
gi|393158813|gb|EJC59069.1| membrane protein oxaA [Helicobacter pylori Hp M9]
Length = 544
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420429525|ref|ZP_14928558.1| inner membrane protein oxaA [Helicobacter pylori Hp A-17]
gi|393044855|gb|EJB45847.1| inner membrane protein oxaA [Helicobacter pylori Hp A-17]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420446173|ref|ZP_14945074.1| inner membrane protein oxaA [Helicobacter pylori Hp H-42]
gi|393059362|gb|EJB60242.1| inner membrane protein oxaA [Helicobacter pylori Hp H-42]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori PeCan4]
gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori PeCan4]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC
[Photobacterium angustum S14]
gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio
angustum S14]
Length = 544
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L + + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIANPLHKLLSFIHSLVG------NWGIAIIILTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+A+++R +++R E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 382 MLQPKIQAMRERLGDDRQRQSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHAPFFGWIHDLSA 457
>gi|424048391|ref|ZP_17785944.1| inner membrane protein oxaA [Vibrio cholerae HENC-03]
gi|408882630|gb|EKM21436.1| inner membrane protein oxaA [Vibrio cholerae HENC-03]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|420427879|ref|ZP_14926920.1| inner membrane protein oxaA [Helicobacter pylori Hp A-9]
gi|393040065|gb|EJB41086.1| inner membrane protein oxaA [Helicobacter pylori Hp A-9]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|383750477|ref|YP_005425580.1| membrane protein insertase [Helicobacter pylori ELS37]
gi|380875223|gb|AFF21004.1| membrane protein insertase [Helicobacter pylori ELS37]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|269962686|ref|ZP_06177031.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3]
gi|269832609|gb|EEZ86723.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|420476357|ref|ZP_14975024.1| inner membrane protein oxaA [Helicobacter pylori Hp H-21]
gi|393090264|gb|EJB90898.1| inner membrane protein oxaA [Helicobacter pylori Hp H-21]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420437846|ref|ZP_14936826.1| inner membrane protein oxaA [Helicobacter pylori Hp H-28]
gi|393050773|gb|EJB51727.1| inner membrane protein oxaA [Helicobacter pylori Hp H-28]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|392552757|ref|ZP_10299894.1| preprotein translocase subunit YidC [Pseudoalteromonas spongiae
UST010723-006]
Length = 542
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Query: 82 DSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVI 141
DSA+ A T D + GW FIS+ + +L L I ++ G AII +TVI
Sbjct: 312 DSATLEALQTDLDLTV--DYGWLWFISQPLHSLLMWLYGLIGSL------GLAIIAITVI 363
Query: 142 VKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCL 201
VK+ +PLTK Q S M+NLQPKI A++ RY +++++ +YR+ VNP+ GC
Sbjct: 364 VKMVLYPLTKAQYTSMAKMRNLQPKIMALKDRYGDDRQKMGQAMMEMYRKEKVNPMGGCF 423
Query: 202 PTLATIPVWIGLY 214
P L +P+++GL+
Sbjct: 424 PLLLQMPIFLGLF 436
>gi|381200554|ref|ZP_09907691.1| membrane protein insertase [Sphingobium yanoikuyae XLDN2-5]
Length = 568
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + + ++G AII LT V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEQPIFALLHWLFETLG------NFGVAIICLTFCVRALMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y +++++Q + LY+Q VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKMKALQEKYKDDKQQLQQKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+ E WI LS P
Sbjct: 447 LTIEMRHQPFVLWIKDLSAP 466
>gi|424037662|ref|ZP_17776401.1| inner membrane protein oxaA [Vibrio cholerae HENC-02]
gi|408895287|gb|EKM31727.1| inner membrane protein oxaA [Vibrio cholerae HENC-02]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|420424435|ref|ZP_14923503.1| inner membrane protein oxaA [Helicobacter pylori Hp A-4]
gi|393039723|gb|EJB40750.1| inner membrane protein oxaA [Helicobacter pylori Hp A-4]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|421719014|ref|ZP_16158304.1| inner membrane protein oxaA [Helicobacter pylori R038b]
gi|407218491|gb|EKE88315.1| inner membrane protein oxaA [Helicobacter pylori R038b]
Length = 546
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSTMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|421712538|ref|ZP_16151872.1| inner membrane protein oxaA [Helicobacter pylori R030b]
gi|407209811|gb|EKE79699.1| inner membrane protein oxaA [Helicobacter pylori R030b]
Length = 545
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|444374843|ref|ZP_21174146.1| membrane protein insertase [Helicobacter pylori A45]
gi|443620702|gb|ELT81145.1| membrane protein insertase [Helicobacter pylori A45]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|427410089|ref|ZP_18900291.1| membrane protein insertase, YidC/Oxa1 family domain [Sphingobium
yanoikuyae ATCC 51230]
gi|425712222|gb|EKU75237.1| membrane protein insertase, YidC/Oxa1 family domain [Sphingobium
yanoikuyae ATCC 51230]
Length = 568
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + + ++G AII LT V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEQPIFALLHWLFETLG------NFGVAIICLTFCVRALMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y +++++Q + LY+Q VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKMKALQEKYKDDKQQLQQKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+ E WI LS P
Sbjct: 447 LTIEMRHQPFVLWIKDLSAP 466
>gi|420488149|ref|ZP_14986751.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8]
gi|420522023|ref|ZP_15020451.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8b]
gi|393100586|gb|EJC01161.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8]
gi|393125614|gb|EJC26068.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8b]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKNSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|386284542|ref|ZP_10061763.1| membrane protein insertase [Sulfurovum sp. AR]
gi|385344471|gb|EIF51186.1| membrane protein insertase [Sulfurovum sp. AR]
Length = 532
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ VL + D + ++G+AIIL T++VK FPL+ K + S ++
Sbjct: 312 GWFSFLAKPFFKVLLWINDYVG------NWGWAIILFTLLVKFVLFPLSYKGMMSMNKLK 365
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K I+++Y G+ ++ ++ +Y++ G NP+ GCLP L IPV+ LY+ L N A
Sbjct: 366 DLAPKMKEIKEKYKGDPAKMNVQMMEMYKKHGANPMGGCLPLLLQIPVFFALYRVLLN-A 424
Query: 222 NEGLLTEGFFWIPSLS 237
+E WI +L+
Sbjct: 425 DELQGAGWILWIDNLA 440
>gi|419419126|ref|ZP_13959389.1| membrane protein insertase [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384372948|gb|EIE28502.1| membrane protein insertase [Helicobacter pylori NCTC 11637 = CCUG
17874]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420496689|ref|ZP_14995250.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25]
gi|420528719|ref|ZP_15027109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25c]
gi|420528880|ref|ZP_15027268.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25d]
gi|393114386|gb|EJC14901.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25]
gi|393132318|gb|EJC32739.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25c]
gi|393137994|gb|EJC38376.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25d]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420466190|ref|ZP_14964950.1| inner membrane protein oxaA [Helicobacter pylori Hp H-6]
gi|393078765|gb|EJB79503.1| inner membrane protein oxaA [Helicobacter pylori Hp H-6]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|424034651|ref|ZP_17774054.1| inner membrane protein oxaA [Vibrio cholerae HENC-01]
gi|408872312|gb|EKM11533.1| inner membrane protein oxaA [Vibrio cholerae HENC-01]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHSPFFGWIHDLSA 457
>gi|410679216|ref|YP_006931618.1| inner membrane protein translocase component YidC [Borrelia afzelii
HLJ01]
gi|408536604|gb|AFU74735.1| putative inner membrane protein translocase component YidC
[Borrelia afzelii HLJ01]
Length = 544
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 82 DSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVI 141
+S + S A G + + W+ I M+ V+++ D I P ++G +II LT++
Sbjct: 301 NSDNTFGLSDIAFGMSVEKSLWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIV 353
Query: 142 VKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCL 201
V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GC
Sbjct: 354 VRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCF 413
Query: 202 PTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW---- 253
P + +P++ LY ++N+ LL F WI LS G + +SW
Sbjct: 414 PIILQLPIFFALYSLVNNLF---LLRGANFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIR 470
Query: 254 LLPFVDGHPPLG 265
+LPF+ LG
Sbjct: 471 ILPFIMMFTQLG 482
>gi|420441124|ref|ZP_14940074.1| inner membrane protein oxaA [Helicobacter pylori Hp H-30]
gi|393054265|gb|EJB55194.1| inner membrane protein oxaA [Helicobacter pylori Hp H-30]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|350529808|ref|ZP_08908749.1| membrane protein insertase [Vibrio rotiferianus DAT722]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|345020616|ref|ZP_08784229.1| OxaA-like protein precursor [Ornithinibacillus scapharcae TW25]
Length = 254
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
++G +IIL+T+I++ PL KQ++S+ AMQ++QP++K +QQ+Y A Q+++Q ET
Sbjct: 58 NFGLSIILVTIIIRTVLLPLNIKQLKSSKAMQDIQPELKELQQKYSSKDANTQQKLQQET 117
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 234
L+++ GVNPLAGCLP +P+ + Y A+ + + + F W P
Sbjct: 118 MALFQKHGVNPLAGCLPIFIQMPILLAFYHAI--MRTDEIDGHSFLWFP 164
>gi|417932848|ref|ZP_12576185.1| 60Kd inner membrane protein [Propionibacterium acnes SK182B-JCVI]
gi|340774092|gb|EGR96581.1| 60Kd inner membrane protein [Propionibacterium acnes SK182B-JCVI]
Length = 359
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP DG G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNDG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|208435316|ref|YP_002266982.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori G27]
gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27]
Length = 548
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|444426987|ref|ZP_21222386.1| membrane protein insertase [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239754|gb|ELU51311.1| membrane protein insertase [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|403236803|ref|ZP_10915389.1| OxaA-like protein precursor [Bacillus sp. 10403023]
Length = 258
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 13/130 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYA----GNQERIQLET 185
+YG AII++T++++ A PL KQ +S+ AMQ +QP++KA++++Y+ Q+++Q ET
Sbjct: 59 NYGLAIIIVTLLIRFALLPLMIKQTKSSKAMQAIQPELKALREKYSSKDQATQQKLQQET 118
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL---SNVANEGLL------TEGFFWIPSL 236
+L+++ GVNPLAGC P L +P+ IG Y A+ +A L ++ ++ +P +
Sbjct: 119 MQLFQKHGVNPLAGCFPLLIQMPILIGFYHAIMRTREIAEHNFLWFDLGESDPYYILPIV 178
Query: 237 SGPTTIAARQ 246
+G TT ++
Sbjct: 179 AGVTTFIQQK 188
>gi|156972771|ref|YP_001443678.1| putative inner membrane protein translocase component YidC [Vibrio
harveyi ATCC BAA-1116]
gi|166977424|sp|A7N0X9.1|YIDC_VIBHB RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|156524365|gb|ABU69451.1| hypothetical protein VIBHAR_00436 [Vibrio harveyi ATCC BAA-1116]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|420505066|ref|ZP_15003590.1| inner membrane protein oxaA [Helicobacter pylori Hp P-62]
gi|393154212|gb|EJC54497.1| inner membrane protein oxaA [Helicobacter pylori Hp P-62]
Length = 550
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|420483102|ref|ZP_14981736.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2]
gi|420513569|ref|ZP_15012047.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2b]
gi|393097706|gb|EJB98299.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2]
gi|393155986|gb|EJC56257.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2b]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|387908639|ref|YP_006338973.1| inner membrane protein translocase component YidC [Helicobacter
pylori XZ274]
gi|387573574|gb|AFJ82282.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori XZ274]
Length = 546
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K IQ++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEIQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
Length = 547
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ M L L I ++G++I++LT+I+++ FPL+ K + S ++
Sbjct: 330 GWFTFIARPMFKFLNWLHGYIG------NWGWSIVVLTLIIRLILFPLSYKGMLSMNKLK 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K +Q++Y +++++Q+ LY++ G NP+ GCLP L IPV+ +Y+ L N A
Sbjct: 384 DLAPKMKELQEKYKDDKQKLQMHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLN-A 442
Query: 222 NEGLLTEGFFWIPSLS 237
E E WI LS
Sbjct: 443 IELKGAEWALWIHDLS 458
>gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
Length = 544
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D V ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYD------VMPNWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|398383127|ref|ZP_10541201.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
domain-containing protein [Sphingobium sp. AP49]
gi|397725294|gb|EJK85747.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
domain-containing protein [Sphingobium sp. AP49]
Length = 568
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF + + + +L L + + ++G AII LT V+ FP+ ++Q S A
Sbjct: 334 DWGWFYWFEQPIFALLHWLFETLG------NFGVAIICLTFCVRALMFPVAQRQFASMAA 387
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+KA+Q++Y +++++Q + LY+Q VNPLAGCLP IP++ LY+ L
Sbjct: 388 MRAVQPKLKALQEKYKDDKQQLQQKMMELYKQEKVNPLAGCLPIFLQIPIFFALYKVL-Q 446
Query: 220 VANEGLLTEGFFWIPSLSGP 239
+ E WI LS P
Sbjct: 447 LTIEMRHQPFVLWIKDLSAP 466
>gi|420484720|ref|ZP_14983341.1| inner membrane protein oxaA [Helicobacter pylori Hp P-3]
gi|420515102|ref|ZP_15013569.1| inner membrane protein oxaA [Helicobacter pylori Hp P-3b]
gi|393098555|gb|EJB99141.1| inner membrane protein oxaA [Helicobacter pylori Hp P-3]
gi|393155545|gb|EJC55817.1| inner membrane protein oxaA [Helicobacter pylori Hp P-3b]
Length = 545
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|239826978|ref|YP_002949602.1| hypothetical protein GWCH70_1536 [Geobacillus sp. WCH70]
gi|239807271|gb|ACS24336.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70]
Length = 252
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++T+AMQ L+P+++ +Q++Y GN Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQYKTTIAMQKLRPELQKLQEKYKGNDIETQRKLQKEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ G++P +GCLP +P+++ LY A+S L F W+
Sbjct: 114 MQLYQKHGIHPASGCLPVFIQMPIFMALYYAISRTQEIKL--HSFLWV 159
>gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC
[Borrelia afzelii PKo]
gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
gi|384206934|ref|YP_005592655.1| 60Kd inner membrane family protein [Borrelia afzelii PKo]
gi|122956367|sp|Q0SN67.1|YIDC_BORAP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo]
gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
gi|342856817|gb|AEL69665.1| 60Kd inner membrane family protein [Borrelia afzelii PKo]
Length = 544
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 82 DSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVI 141
+S + S A G + + W+ I M+ V+++ D I P ++G +II LT++
Sbjct: 301 NSDNTFGLSDIAFGMSVEKSLWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIV 353
Query: 142 VKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCL 201
V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GC
Sbjct: 354 VRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCF 413
Query: 202 PTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW---- 253
P + +P++ LY ++N+ LL F WI LS G + +SW
Sbjct: 414 PIILQLPIFFALYSLVNNLF---LLRGANFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIR 470
Query: 254 LLPFVDGHPPLG 265
+LPF+ LG
Sbjct: 471 ILPFIMMFTQLG 482
>gi|388601700|ref|ZP_10160096.1| membrane protein insertase [Vibrio campbellii DS40M4]
Length = 540
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|386756471|ref|YP_006229688.1| membrane protein insertase [Helicobacter pylori PeCan18]
gi|384562729|gb|AFI03195.1| membrane protein insertase [Helicobacter pylori PeCan18]
Length = 546
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420462839|ref|ZP_14961620.1| inner membrane protein oxaA [Helicobacter pylori Hp H-3]
gi|393078240|gb|EJB78984.1| inner membrane protein oxaA [Helicobacter pylori Hp H-3]
Length = 547
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|296134496|ref|YP_003641743.1| YidC/Oxa1 family membrane protein insertase [Thermincola potens JR]
gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens
JR]
Length = 228
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AIIL+TV++K+ PLT KQ++S Q LQPK+K IQ++Y + ++ Q LY
Sbjct: 26 NYGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKVKEIQEKYK-DPKQAQQAIMELY 84
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
+Q G NPL+GCLP L +P+ I LY+AL F WI +LS
Sbjct: 85 KQYGANPLSGCLPLLLQMPIIIALYRALMKFPYTNEAHAKFLWISNLS 132
>gi|435855278|ref|YP_007316597.1| preprotein translocase subunit YidC [Halobacteroides halobius DSM
5150]
gi|433671689|gb|AGB42504.1| preprotein translocase subunit YidC [Halobacteroides halobius DSM
5150]
Length = 220
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII LTV V+V FPL KQ S MQ LQPK++ ++++Y +++ Q +T LY
Sbjct: 30 SYGLAIISLTVAVRVVLFPLVAKQTRSMKKMQELQPKMEELKEKYGDDKQEFQQKTMELY 89
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
++ VNP +GCLP L +P+ GL++ L + L + F +P LS P
Sbjct: 90 QKHQVNPASGCLPLLVQMPILFGLFRGLR--GWQELTGQSFLMVPDLSDP 137
>gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54]
gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
LSv54]
Length = 553
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF I++ ++L ++YG AIIL+T++ K +P+T+K ++S
Sbjct: 329 NFGWFDIIAKPTLWLLNFFHS------FTHNYGIAIILVTIMFKGIFWPITQKGMKSMKN 382
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
MQ LQPK+ A+++++ + R+ E LY+ VNPL GCLP + IPV+ LY+ L
Sbjct: 383 MQKLQPKMAALKEKHKDDPTRMNKEVMSLYKAYKVNPLGGCLPMVLQIPVFFALYKVLL- 441
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPL 264
++ E FWI LS P + I + LP++ G P L
Sbjct: 442 LSIELRHAPFMFWITDLSAPDRL-------WIGFNLPYLGGLPVL 479
>gi|28896777|ref|NP_796382.1| inner membrane protein translocase component YidC [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838490|ref|ZP_01991157.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810]
gi|260361953|ref|ZP_05774958.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030]
gi|260876536|ref|ZP_05888891.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034]
gi|260897407|ref|ZP_05905903.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466]
gi|260901105|ref|ZP_05909500.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037]
gi|38502972|sp|Q87TR5.1|YIDC_VIBPA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|28804985|dbj|BAC58266.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus RIMD
2210633]
gi|149748113|gb|EDM58972.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810]
gi|308087936|gb|EFO37631.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466]
gi|308090400|gb|EFO40095.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034]
gi|308108175|gb|EFO45715.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037]
gi|308114149|gb|EFO51689.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030]
Length = 540
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|343127750|ref|YP_004777681.1| 60Kd inner membrane family protein [Borrelia bissettii DN127]
gi|342222438|gb|AEL18616.1| 60Kd inner membrane family protein [Borrelia bissettii DN127]
Length = 532
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 302 GMSVEKSLWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 354
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQPK+K +Q R+ + +++ E RLY++ GVNPL GC P + +P++ LY
Sbjct: 355 RATAELSKLQPKMKELQLRFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALY 414
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 415 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 470
>gi|420455941|ref|ZP_14954765.1| inner membrane protein oxaA [Helicobacter pylori Hp A-14]
gi|393071061|gb|EJB71848.1| inner membrane protein oxaA [Helicobacter pylori Hp A-14]
Length = 548
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHIMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13]
Length = 260
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 115/221 (52%), Gaps = 28/221 (12%)
Query: 74 LADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGF 133
L A + L + G + + G W ++ + +++ + ++ YG
Sbjct: 7 LLMALIGLVALLSGCTEINQPITNESEGFWNEYVVYPLSWLITYFAELMNN-----DYGL 61
Query: 134 AIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLY 189
+II++T++++ A PL KQ ++ AMQ LQP++KA++++Y+ Q+++Q ET L+
Sbjct: 62 SIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEMKALREKYSSKDQKTQQKLQQETMGLF 121
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQAL---SNVANEGLLT------EGFFWIPSLSGPT 240
++ GVNPLAGC P L +P+ IG + A+ + +AN + + +F +P ++G T
Sbjct: 122 QKHGVNPLAGCFPLLVQMPILIGFFHAITRTTEIANHNFMWFDLGDPDPYFILPVVAGIT 181
Query: 241 TIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
T ++ ++ +D +P + ++P+++VV
Sbjct: 182 TFIQQKI------MMAGMDNNPQM----VMMLWIMPIMIVV 212
>gi|420457761|ref|ZP_14956573.1| inner membrane protein oxaA [Helicobacter pylori Hp A-16]
gi|393071636|gb|EJB72418.1| inner membrane protein oxaA [Helicobacter pylori Hp A-16]
Length = 549
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|417321631|ref|ZP_12108167.1| membrane protein insertase [Vibrio parahaemolyticus 10329]
gi|433656325|ref|YP_007273704.1| Inner membrane protein translocase component YidC, long form
[Vibrio parahaemolyticus BB22OP]
gi|328471231|gb|EGF42133.1| membrane protein insertase [Vibrio parahaemolyticus 10329]
gi|432507013|gb|AGB08530.1| Inner membrane protein translocase component YidC, long form
[Vibrio parahaemolyticus BB22OP]
Length = 540
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 440 SVELRHSPFFGWIHDLSA 457
>gi|384891792|ref|YP_005765925.1| Inner membrane protein translocase component [Helicobacter pylori
908]
gi|385224472|ref|YP_005784398.1| putative inner membrane protein translocase component [Helicobacter
pylori 2017]
gi|385232325|ref|YP_005792244.1| Inner membrane protein translocase component [Helicobacter pylori
2018]
gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori
908]
gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori
2018]
gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter
pylori 2017]
Length = 547
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|304405892|ref|ZP_07387550.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
curdlanolyticus YK9]
gi|304345135|gb|EFM10971.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
curdlanolyticus YK9]
Length = 258
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
YG +I+LLT+IV+ PLT KQ S+ AMQ +QP+++ +++++ N + +Q ET +L+
Sbjct: 66 EYGLSILLLTIIVRTLILPLTLKQYRSSKAMQAIQPELEQLRKKHKDNPQLLQQETMKLF 125
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+Q VNP+AGCLP + +PV+I LY A+ N + F W+
Sbjct: 126 QQNSVNPMAGCLPMIVQMPVFIALYNAI--YMNSAIREHQFLWL 167
>gi|420473049|ref|ZP_14971730.1| inner membrane protein oxaA [Helicobacter pylori Hp H-18]
gi|393086553|gb|EJB87227.1| inner membrane protein oxaA [Helicobacter pylori Hp H-18]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420450992|ref|ZP_14949846.1| inner membrane protein oxaA [Helicobacter pylori Hp H-45]
gi|393064924|gb|EJB65754.1| inner membrane protein oxaA [Helicobacter pylori Hp H-45]
Length = 544
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|421715882|ref|ZP_16155194.1| inner membrane protein oxaA [Helicobacter pylori R037c]
gi|407221780|gb|EKE91583.1| inner membrane protein oxaA [Helicobacter pylori R037c]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420407821|ref|ZP_14906980.1| inner membrane protein oxaA [Helicobacter pylori NQ4216]
gi|393025306|gb|EJB26412.1| inner membrane protein oxaA [Helicobacter pylori NQ4216]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
Length = 544
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 9/137 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L + + ++G AII+LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIANPLHKLLSFIHGLVG------NWGIAIIILTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+A+++R +++R E LY++ VNPL GCLP L +P++I LY AL +
Sbjct: 382 MLQPKIQAMRERLGDDRQRQSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWAL--ME 439
Query: 222 NEGLLTEGFF-WIPSLS 237
+ L FF WI LS
Sbjct: 440 SVELRHAPFFGWIHDLS 456
>gi|420439470|ref|ZP_14938433.1| inner membrane protein oxaA [Helicobacter pylori Hp H-29]
gi|393053789|gb|EJB54731.1| inner membrane protein oxaA [Helicobacter pylori Hp H-29]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKNSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420499604|ref|ZP_14998160.1| inner membrane protein oxaA [Helicobacter pylori Hp P-26]
gi|393151806|gb|EJC52109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-26]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|385227611|ref|YP_005787535.1| membrane protein insertase [Helicobacter pylori SNT49]
gi|344332524|gb|AEN17554.1| membrane protein insertase [Helicobacter pylori SNT49]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+F I++ + ++L+ + +++G AIILLTV++K A +PLT K S M+
Sbjct: 330 GFFHIIAKGLLWLLEFFHKYV------HNWGLAIILLTVLIKAAFWPLTAKSYASMEKMK 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + I++++ N+E++ E LY+ GVNP +GC+P L +PV+ GLYQAL
Sbjct: 384 KLQPHMMEIREKFKDNKEQMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQAL 439
>gi|410446915|ref|ZP_11301017.1| membrane protein insertase, YidC/Oxa1 family [SAR86 cluster
bacterium SAR86E]
gi|409979902|gb|EKO36654.1| membrane protein insertase, YidC/Oxa1 family [SAR86 cluster
bacterium SAR86E]
Length = 523
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + +L ++ +D ++G +I+LLT ++K +P++ K S M+
Sbjct: 304 GWFWFLAQPLMMLLSMINSLVD------NWGVSIVLLTFLIKALLWPISAKGFSSMAKMR 357
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
QPK+K IQ+RY ++ ++ E LY++ G+NP GC P L +PV+I + L +
Sbjct: 358 TAQPKLKEIQERYKDDRAKLGTEMMALYKKEGINPAGGCFPLLLQMPVFIAFFFCLRE-S 416
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSG-SGISWLLPFVDGHPP 263
E FFWI LS P + + +G+ +L ++ PP
Sbjct: 417 VELRHESFFFWIQDLSSPDPLFILPAAFAGLMYLTQQLNPQPP 459
>gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
Length = 707
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII LT+IV+ + +PL++KQ M+ LQP+I ++++Y ++E++ L+
Sbjct: 429 SYGIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYGDDREKLGRAQMELF 488
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
+ NPLAGCLP +P++ GLY AL+N L F W+ +L+ P +
Sbjct: 489 SKNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQ--LRGTPFLWVDNLAAPDAL 539
>gi|420505256|ref|ZP_15003772.1| inner membrane protein oxaA [Helicobacter pylori Hp P-74]
gi|393116788|gb|EJC17292.1| inner membrane protein oxaA [Helicobacter pylori Hp P-74]
Length = 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|385222802|ref|YP_005771935.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SouthAfrica7]
gi|317011581|gb|ADU85328.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SouthAfrica7]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q+ Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEEYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420442791|ref|ZP_14941722.1| inner membrane protein oxaA [Helicobacter pylori Hp H-36]
gi|393056736|gb|EJB57646.1| inner membrane protein oxaA [Helicobacter pylori Hp H-36]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|315039282|ref|YP_004032850.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112]
gi|325957756|ref|YP_004293168.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC]
gi|385818451|ref|YP_005854841.1| stage III sporulation protein J [Lactobacillus amylovorus GRL1118]
gi|312277415|gb|ADQ60055.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112]
gi|325334321|gb|ADZ08229.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC]
gi|327184389|gb|AEA32836.1| stage III sporulation protein J [Lactobacillus amylovorus GRL1118]
Length = 298
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADG----ATQKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G AS A+G + +G W+ ++S + ++ K++ +
Sbjct: 25 AVITLAVVLTGCASQGANGQVAPVSHTSGNWWDRWIVYYMSAFILWLAKLMGN------- 77
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ TVIV+V PL + ST MQ++QP+I ++++Y G +Q
Sbjct: 78 --SYGWAIIVFTVIVRVILLPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRSLLQQ 135
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ET++LY++AGVNP AGCLP + +PV LY A+ + L T F W+ LS P
Sbjct: 136 ETNKLYKEAGVNPYAGCLPLIIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 188
>gi|425432220|ref|ZP_18812793.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Helicobacter pylori GAM100Ai]
gi|410715227|gb|EKQ72651.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Helicobacter pylori GAM100Ai]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420532067|ref|ZP_15030436.1| inner membrane protein oxaA [Helicobacter pylori Hp P-28b]
gi|393135407|gb|EJC35807.1| inner membrane protein oxaA [Helicobacter pylori Hp P-28b]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420469560|ref|ZP_14968277.1| inner membrane protein oxaA [Helicobacter pylori Hp H-10]
gi|393083605|gb|EJB84308.1| inner membrane protein oxaA [Helicobacter pylori Hp H-10]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|354807142|ref|ZP_09040617.1| membrane insertase, YidC/Oxa1 family domain protein [Lactobacillus
curvatus CRL 705]
gi|354514405|gb|EHE86377.1| membrane insertase, YidC/Oxa1 family domain protein [Lactobacillus
curvatus CRL 705]
Length = 277
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG+AI+ T+I++V PLT Q +S L Q + P+I+A+Q++YA Q++++ ET
Sbjct: 60 SYGWAIVAFTIIIRVIILPLTWWQSKSMLKQQEVAPEIQALQKKYASKDAETQQKLREET 119
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY +AGVNP+ GCLP + +PV I LYQA+ A L + F W+
Sbjct: 120 QKLYAEAGVNPVVGCLPLVVQMPVLIALYQAIYRTA--ALKSGTFLWM 165
>gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22]
gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22]
Length = 533
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L+ L+ I ++G+ I+ LT++VK+ +PL+ K + S ++
Sbjct: 321 GWFTFIAKPMFVLLQFLQGYIG------NWGWTIVALTILVKLVLYPLSYKGMVSMQKLK 374
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K IQ +Y ++++ + LY++ G NP+ GCLP L IP++ +Y+ L N A
Sbjct: 375 DLAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLLLQIPIFFAIYRVLIN-A 433
Query: 222 NEGLLTEGFFWIPSLSG 238
E E FWI L+
Sbjct: 434 IELKGAEWIFWIHDLAA 450
>gi|410867931|ref|YP_006982542.1| Membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acidipropionici ATCC 4875]
gi|410824572|gb|AFV91187.1| Membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acidipropionici ATCC 4875]
Length = 363
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 16/175 (9%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++ AII LT+ +++ PL KQ+ S+ +MQ +QPK+KAIQ +Y ++ER E L
Sbjct: 50 WAWALAIIFLTIFIRILLIPLFVKQINSSRSMQAIQPKMKAIQDKYGDDRERAGQEMMNL 109
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALS----NVANEGLLTEGFFWIPSLSGPTTIAA 244
Y++ GVNP A CLP L +P+++ L++ L +A + + + SL A
Sbjct: 110 YKEEGVNPSASCLPLLLQMPIFLALFRVLDGASRGIARGKFMVDNPDLVSSLQHTKIFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ-YASMELMK---PPQA 295
+G LP +G G A LVL ++LVVS Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPINNG---FGATQIVA-LVLIIILVVSLFYTQLQLMRKNMPPES 216
>gi|420500246|ref|ZP_14998792.1| inner membrane protein oxaA [Helicobacter pylori Hp P-30]
gi|393152013|gb|EJC52314.1| inner membrane protein oxaA [Helicobacter pylori Hp P-30]
Length = 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420476479|ref|ZP_14975142.1| inner membrane protein oxaA [Helicobacter pylori Hp H-23]
gi|393094904|gb|EJB95509.1| inner membrane protein oxaA [Helicobacter pylori Hp H-23]
Length = 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKNSEWVLWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|385221371|ref|YP_005782843.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori India7]
gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori India7]
Length = 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC
[Ochrobactrum anthropi ATCC 49188]
gi|404318491|ref|ZP_10966424.1| membrane protein insertase [Ochrobactrum anthropi CTS-325]
gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC
49188]
Length = 607
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M ++ ID ++ ++G AI+++TV++K FPL K +S M
Sbjct: 362 GWFYFITKPMFYL-------IDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARM 414
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ +QPK+ I+++YA ++ + Q E RLY++ +NPLAGC P L IPV+ LY+ L V
Sbjct: 415 KLVQPKLTEIREKYADDKMKQQQEMMRLYKEEKINPLAGCWPVLVQIPVFFALYKVLY-V 473
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI L+ P
Sbjct: 474 TIEMRHAPFFGWIQDLAAP 492
>gi|420478245|ref|ZP_14976898.1| inner membrane protein oxaA [Helicobacter pylori Hp H-34]
gi|393097019|gb|EJB97613.1| inner membrane protein oxaA [Helicobacter pylori Hp H-34]
Length = 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|420454374|ref|ZP_14953207.1| inner membrane protein oxaA [Helicobacter pylori Hp A-8]
gi|393067695|gb|EJB68502.1| inner membrane protein oxaA [Helicobacter pylori Hp A-8]
Length = 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|421715647|ref|ZP_16154962.1| inner membrane protein oxaA [Helicobacter pylori R036d]
gi|407214505|gb|EKE84351.1| inner membrane protein oxaA [Helicobacter pylori R036d]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420496367|ref|ZP_14994930.1| inner membrane protein oxaA [Helicobacter pylori Hp P-23]
gi|393110425|gb|EJC10950.1| inner membrane protein oxaA [Helicobacter pylori Hp P-23]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420434720|ref|ZP_14933720.1| inner membrane protein oxaA [Helicobacter pylori Hp H-27]
gi|393052488|gb|EJB53434.1| inner membrane protein oxaA [Helicobacter pylori Hp H-27]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083]
gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083]
Length = 428
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ + P +++G +I+ L +++++ PL KQ++ST AM
Sbjct: 8 FSFITTPVSWVIVQFHTVYGKIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 A--------NEGLL 226
A NE LL
Sbjct: 128 ATGDTIGVINESLL 141
>gi|420432908|ref|ZP_14931921.1| inner membrane protein oxaA [Helicobacter pylori Hp H-16]
gi|393046998|gb|EJB47977.1| inner membrane protein oxaA [Helicobacter pylori Hp H-16]
Length = 545
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|386841271|ref|YP_006246329.1| inner membrane protein translocase component YidC [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101572|gb|AEY90456.1| putative inner membrane protein translocase component YidC
[Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|451794566|gb|AGF64615.1| putative inner membrane protein translocase component YidC
[Streptomyces hygroscopicus subsp. jinggangensis TL01]
Length = 422
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHTVYGALFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY+++G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKESGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 A--------NEGLL 226
A NE LL
Sbjct: 128 ASGHTIGVINESLL 141
>gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SJM180]
gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SJM180]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|189485052|ref|YP_001955993.1| protein translocase subunit YidC [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|254778169|sp|B1GZ50.1|YIDC_UNCTG RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|170287011|dbj|BAG13532.1| protein translocase subunit YidC [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 519
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+FGF+ + +L + ++YG+AII+LT I+++ PLT K +S+ AM+
Sbjct: 301 GFFGFLGKIAFSILVFF------YKLTHNYGWAIIMLTTIIQILVLPLTLKSFKSSAAMK 354
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN-- 219
+QP IK IQ +Y N +R++ E +Y+ VNPL GCLP L +P++ + L N
Sbjct: 355 RVQPVIKDIQTKYKDNPQRLKAEMLNIYQSQKVNPLGGCLPMLLQLPIFWAFFTMLRNAY 414
Query: 220 -VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDG 260
+ NEG + W+ LS Q GS LLP + G
Sbjct: 415 ELRNEGWI----LWVKDLSAADQFM--QFGSFNLNLLPLMMG 450
>gi|420425984|ref|ZP_14925044.1| inner membrane protein oxaA [Helicobacter pylori Hp A-5]
gi|393040882|gb|EJB41900.1| inner membrane protein oxaA [Helicobacter pylori Hp A-5]
Length = 547
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|386384871|ref|ZP_10070212.1| putative inner membrane protein translocase component YidC
[Streptomyces tsukubaensis NRRL18488]
gi|385667666|gb|EIF91068.1| putative inner membrane protein translocase component YidC
[Streptomyces tsukubaensis NRRL18488]
Length = 422
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +++ A+ P +++G +I+ L V++++ PL KQ++S M
Sbjct: 8 FSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP LA P + LY LS +
Sbjct: 68 QALQPKMKAIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSKI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum
IPO1609]
gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum
IPO1609]
Length = 563
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 30/196 (15%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
K+ GW I++ + ++L+ + + ++G++I+ LTV+VK+ FPL+ S
Sbjct: 338 KDYGWLTVIAKPLFWLLERIHALLG------NWGWSIVALTVLVKLVFFPLSATSYRSMA 391
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA-L 217
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP L IPV++ LY A L
Sbjct: 392 KMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALL 451
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
S+V G G W+ L+ P + G P+G +LP+
Sbjct: 452 SSVEMRGAPWVG--WVHDLAAPDALFGTYFGV-------------PVG--------LLPI 488
Query: 278 LLVVSQYASMELMKPP 293
L+ VS + +L P
Sbjct: 489 LMAVSMFVQTKLNPTP 504
>gi|455648290|gb|EMF27170.1| inner membrane protein translocase component YidC [Streptomyces
gancidicus BKS 13-15]
Length = 424
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ ++ P +++G +I+ L +++++ PL KQ+++T AM
Sbjct: 8 FSFITTPVSWVIVQFHSVYGSIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+++
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSI 127
Query: 221 ANE---GLLTE 228
A+ G++ E
Sbjct: 128 ASNDTIGVINE 138
>gi|420491754|ref|ZP_14990330.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15]
gi|420525520|ref|ZP_15023923.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15b]
gi|393108449|gb|EJC08983.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15]
gi|393133541|gb|EJC33957.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15b]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|359298522|ref|ZP_09184361.1| membrane protein insertase [Haemophilus [parainfluenzae] CCUG
13788]
gi|402307120|ref|ZP_10826150.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus sputorum
HK 2154]
gi|400373512|gb|EJP26442.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus sputorum
HK 2154]
Length = 543
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ V ++G AIIL+T++VK +PLTK Q S M+
Sbjct: 329 GWAWFIAKPLFWLLTTIQ------KVVSNWGIAIILVTIVVKSLLYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P++I LY
Sbjct: 383 MLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAV 442
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 443 E--LRHAPFFGWIHDLSA 458
>gi|387826087|ref|YP_005805540.1| inner membrane protein OxaA [Borrelia burgdorferi JD1]
gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1]
Length = 544
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQP++K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPRMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
Length = 578
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + VL L + ++G A++ T++VK FPL KQ S M+
Sbjct: 332 GWFAFLTRPIFTVLDWLNTMLG------NFGLALMAFTLLVKALFFPLATKQFHSMGKMR 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKIKA+++RY +Q + + LY+Q GVNP +GCLP L IPV+ LY+ L V
Sbjct: 386 QLQPKIKALRERYKDDQMALNQQMIGLYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VT 444
Query: 222 NEGLLTEGFFWIPSLS 237
E F WI LS
Sbjct: 445 IEMRHAPFFGWIHDLS 460
>gi|384898111|ref|YP_005773539.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Lithuania75]
gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Lithuania75]
Length = 546
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420494708|ref|ZP_14993275.1| inner membrane protein oxaA [Helicobacter pylori Hp P-16]
gi|393109863|gb|EJC10391.1| inner membrane protein oxaA [Helicobacter pylori Hp P-16]
Length = 546
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K IQ++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKEIQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|345849347|ref|ZP_08802360.1| putative inner membrane protein translocase component YidC
[Streptomyces zinciresistens K42]
gi|345639253|gb|EGX60747.1| putative inner membrane protein translocase component YidC
[Streptomyces zinciresistens K42]
Length = 422
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 65/95 (68%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
Y++ G NPL+ CLP LA P + LY L+++AN
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYSVLNSIANN 130
>gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
racemifer DSM 44963]
gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
racemifer DSM 44963]
Length = 353
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+G AII+LTV++K+ FPLT +Q+ S+ AMQ LQPKI I++++ G+ + L ++LY
Sbjct: 30 DFGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIAEIKKKHPGDVQSQSLAMNQLY 89
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLT------EGFFWIPSLSGPTTIA 243
++ GV PLAGCLP + +PV GLY A+ + + LT E + ++ G I
Sbjct: 90 KEYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLTIETLNRELYPFVAPFKGVPDIN 149
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQAR 296
R W F++ H + +LP+L ++ + S+ + +P A+
Sbjct: 150 LR-------W-FEFLNPHWFISLGQPDPTHILPILAGLATFVSLRMAQPRNAQ 194
>gi|411011440|ref|ZP_11387769.1| membrane protein OxaA [Aeromonas aquariorum AAK1]
Length = 548
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGVMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKLAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|423198931|ref|ZP_17185514.1| inner membrane protein oxaA [Aeromonas hydrophila SSU]
gi|404629779|gb|EKB26507.1| inner membrane protein oxaA [Aeromonas hydrophila SSU]
Length = 548
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGVMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKLAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|349686495|ref|ZP_08897637.1| translocase inner membrane component [Gluconacetobacter oboediens
174Bp2]
Length = 585
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + VL L + ++G A++ T++VK FPL KQ S M+
Sbjct: 339 GWFAFLTRPIFTVLDWLNTMLG------NFGLALMAFTLLVKALFFPLATKQFHSMGKMR 392
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKIKA+++RY +Q + + LY+Q GVNP +GCLP L IPV+ LY+ L V
Sbjct: 393 QLQPKIKALRERYKDDQMALNQQMIALYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VT 451
Query: 222 NEGLLTEGFFWIPSLS 237
E F WI LS
Sbjct: 452 IEMRHAPFFGWIHDLS 467
>gi|384156218|ref|YP_005539033.1| putative inner membrane protein translocase component [Arcobacter
butzleri ED-1]
gi|345469772|dbj|BAK71223.1| putative inner membrane protein translocase component [Arcobacter
butzleri ED-1]
Length = 517
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L+ L+ I ++G+ I+ LT++VK+ +PL+ K + S ++
Sbjct: 305 GWFTFIAKPMFVLLQFLQSYIG------NWGWTIVALTILVKLVLYPLSYKGMVSMQKLK 358
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+L PK+K IQ +Y ++++ + LY++ G NP+ GCLP + IP++ +Y+ L N A
Sbjct: 359 DLAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLIN-A 417
Query: 222 NEGLLTEGFFWIPSLSG 238
E E FWI L+
Sbjct: 418 IELKGAEWIFWIHDLAA 434
>gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia
aggregata IAM 12614]
gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC
[Labrenzia aggregata IAM 12614]
Length = 606
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M F + H+ ++G AI+++TVIVK+ FPL K S M+
Sbjct: 359 GWFYFLTKPMFFAIDYF------FHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMK 412
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ I+++Y+ ++++ Q LY++ +NPLAGCLP + IPV+ LY+ L V
Sbjct: 413 LVQPQMTEIREKYSDDRQKQQQALMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLY-VT 471
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 472 IEMRHAPFFGWIQDLSAP 489
>gi|444311621|ref|ZP_21147226.1| membrane protein insertase [Ochrobactrum intermedium M86]
gi|443485051|gb|ELT47848.1| membrane protein insertase [Ochrobactrum intermedium M86]
Length = 610
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M ++ ID ++ ++G AI+++TV++K FPL K +S M
Sbjct: 365 GWFYFITKPMFYL-------IDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARM 417
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ +QPK+ I+++YA ++ R Q E +LY++ +NPLAGC P L IPV+ LY+ L V
Sbjct: 418 KLVQPKLTEIREKYADDKMRQQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLY-V 476
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI L+ P
Sbjct: 477 TIEMRHAPFFGWIQDLAAP 495
>gi|386391821|ref|ZP_10076602.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Desulfovibrio sp. U5L]
gi|385732699|gb|EIG52897.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Desulfovibrio sp. U5L]
Length = 530
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ + LK+L D V +YG AIILLTV++K +PL+ K +S M+
Sbjct: 318 GWFDFIAKPL---LKLLHFFYDYVG---NYGVAIILLTVLIKGLFWPLSHKSYKSMEQMK 371
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + ++++Y +++++ E +LY+ VNP GCLP + IPV+ GLYQAL
Sbjct: 372 RLQPLLTQLREKYKDDRQKMNEEMMQLYKTYKVNPAGGCLPMVVQIPVFFGLYQAL 427
>gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
Length = 230
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L + + ++G AII+LT+IV+ +PLTK Q S M+
Sbjct: 14 GWSSFIASPLHELLAFIHGIVG------NWGIAIIILTLIVRGLMYPLTKAQYTSMAKMR 67
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+A+++R+ +++R E LY+ VNPL GCLP L +P++I LY L N++
Sbjct: 68 MLQPKIQAMRERFGDDRQRQSQEMMELYKTEKVNPLGGCLPLLIQMPIFIALYTVL-NLS 126
Query: 222 NEGLLTEGFFWIPSLSG 238
E F WI +LS
Sbjct: 127 TELRNAPFFGWIQNLSA 143
>gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
Length = 544
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPLT K
Sbjct: 314 GMSVEKSFWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGF 366
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
+T + LQP++K +Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY
Sbjct: 367 RATAELSKLQPRMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALY 426
Query: 215 QALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
++N+ LL F WI LS G + +SW +LPF+ LG
Sbjct: 427 SLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|386747197|ref|YP_006220405.1| membrane protein insertase [Helicobacter cetorum MIT 99-5656]
gi|384553439|gb|AFI05195.1| membrane protein insertase [Helicobacter cetorum MIT 99-5656]
Length = 546
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT++V++ +PL+ K + S +++L PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIILLTIVVRLVLYPLSYKGMVSMQKLKDLAPKMKELQEKYKGEPQKLQANMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSAEWILWIHDLSVMDPYFILPLFM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|303247340|ref|ZP_07333613.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
fructosovorans JJ]
gi|302491254|gb|EFL51143.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
fructosovorans JJ]
Length = 537
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ + +L + + +YG AIILLTV++K +PL+ K +S M+
Sbjct: 324 GWFDFIAKPLVKLLHFFYNYVG------NYGVAIILLTVLIKAIFWPLSHKSYKSMEQMK 377
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + ++++Y +++++ E +LY+ VNP GCLP + IPV+ GLYQAL
Sbjct: 378 KLQPLLSQLREKYKDDRQKMNEEMMQLYKTYKVNPAGGCLPMVVQIPVFFGLYQAL 433
>gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC
[Rickettsia africae ESF-5]
gi|259515719|sp|C3PM83.1|YIDC_RICAE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5]
Length = 560
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E + WI LS PTTI + LLPF PPL A +++ + +
Sbjct: 451 IEMRQAPFYGWIKDLSASDPTTIF------NLFGLLPF---SPPLFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E P QA+
Sbjct: 502 FLQQKMSPEPADPMQAQ 518
>gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum CFBP2957]
gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum CFBP2957]
Length = 554
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW I++ + ++L + +H ++G++I+ LTV++K+ FPL+ S
Sbjct: 338 KDYGWLTVIAKPLFWLL-------EKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSM 390
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP L IPV++ LY AL
Sbjct: 391 AKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWAL 450
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 451 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 475
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + +L P
Sbjct: 476 ILPILMAVSMFVQTKLNPTP 495
>gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
Length = 624
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M ++ ID ++ ++G AI+++TV++K FPL K +S M
Sbjct: 379 GWFYFITKPMFYL-------IDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARM 431
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ +QPK+ I+++YA ++ R Q E +LY++ +NPLAGC P L IPV+ LY+ L V
Sbjct: 432 KLVQPKLTEIREKYADDKMRQQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLY-V 490
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI L+ P
Sbjct: 491 TIEMRHAPFFGWIQDLAAP 509
>gi|332288922|ref|YP_004419774.1| putative inner membrane protein translocase component YidC
[Gallibacterium anatis UMN179]
gi|330431818|gb|AEC16877.1| putative inner membrane protein translocase component YidC
[Gallibacterium anatis UMN179]
Length = 540
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L+ ++ + +++G AII +T++VK +PLTK Q S M+
Sbjct: 326 GWAWFIAKPLFWLLQFIQSLV------HNWGLAIIGVTIVVKAILYPLTKAQYTSMAKMR 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 380 MLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 440 E--LRHAPFFGWIQDLSA 455
>gi|401680198|ref|ZP_10812121.1| 60Kd inner membrane protein [Veillonella sp. ACP1]
gi|400218813|gb|EJO49685.1| 60Kd inner membrane protein [Veillonella sp. ACP1]
Length = 218
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F ++ E M ++ + D V P SYG AII++TVI+K PLT KQ++S AMQ L
Sbjct: 4 FNYLVEFMRTLVTYAFNFTDMVGFP-SYGVAIIIITVIIKAILAPLTVKQIKSMKAMQEL 62
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QP++K +Q++Y + +R+Q E +Y++ GVNPLAGCLP L +P I ++ AL
Sbjct: 63 QPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYN 122
Query: 224 GLLTEGFFWIPSL--SGP-----------TTIAARQSGSGIS 252
E F W+PSL S P T + +RQ+G G S
Sbjct: 123 PEF-EHFLWLPSLGESDPYYILPVLSALSTWLMSRQTGMGAS 163
>gi|406956496|gb|EKD84580.1| hypothetical protein ACD_38C00193G0009 [uncultured bacterium]
Length = 290
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 74/107 (69%)
Query: 114 VLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQR 173
+L ++ G+ A+++P + GF+II LT++++V +P +Q+++T M +L+P + A++++
Sbjct: 30 LLVLIFQGLSALNIPGALGFSIISLTILIRVLVWPFMSQQIKATKKMADLKPHLDALKKK 89
Query: 174 YAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ G+++ + LY++ GVNP GCLP L IPV+I LYQA+ N+
Sbjct: 90 HKGDKQALASAQMALYKEHGVNPAGGCLPALIQIPVFIALYQAIINI 136
>gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 432
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 65/94 (69%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y++AG NPL+ CLP LA P + LY L+ +A+
Sbjct: 96 YKEAGTNPLSSCLPILAQSPFFFALYHVLNGIAS 129
>gi|334702440|ref|ZP_08518306.1| membrane protein OxaA [Aeromonas caviae Ae398]
Length = 548
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKLAALKERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|421899513|ref|ZP_16329876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
Length = 563
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 30/196 (15%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
K+ GW I++ + ++L+ + + ++G++I+ LTV+VK+ FPL+ S
Sbjct: 338 KDYGWLTVIAKPLFWLLERIHALLG------NWGWSIVALTVLVKLVFFPLSATSYRSMA 391
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA-L 217
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP L IPV++ LY A L
Sbjct: 392 KMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALL 451
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
S+V G G W+ L+ P + G P+G +LP+
Sbjct: 452 SSVEMRGAPWVG--WVHDLAAPDALFGTYFGV-------------PVG--------LLPI 488
Query: 278 LLVVSQYASMELMKPP 293
L+ VS + +L P
Sbjct: 489 LMAVSMFVQTKLNPTP 504
>gi|407789815|ref|ZP_11136914.1| 60 kDa inner membrane protein [Gallaecimonas xiamenensis 3-C-1]
gi|407206022|gb|EKE75985.1| 60 kDa inner membrane protein [Gallaecimonas xiamenensis 3-C-1]
Length = 538
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G FI E + ++LK L + ++GFAIILLT+IV+ A +PLTK Q S M+
Sbjct: 328 GILWFIGELLFWLLKHLHALVT------NWGFAIILLTLIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
LQPK+ A+++RY +++R+ LY++ VNPL GC P L +P++I LY L
Sbjct: 382 ALQPKLTALKERYGDDRQRMSQAMMELYKKEKVNPLGGCFPLLLQMPIFIALYWVLQE 439
>gi|410616023|ref|ZP_11327018.1| inner membrane protein oxaA [Glaciecola polaris LMG 21857]
gi|410164338|dbj|GAC31156.1| inner membrane protein oxaA [Glaciecola polaris LMG 21857]
Length = 543
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTK Q ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 353 NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 413 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLS 459
>gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC
[Borrelia garinii PBi]
gi|81691561|sp|Q661H9.1|YIDC_BORGA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi]
Length = 544
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
S A G + + W+ I M+ V+++ D I P ++G +II LT++V++ FPL
Sbjct: 309 SDIAFGMSVEKSLWY-LIQVPMQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPL 361
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
T K +T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GC P + +P+
Sbjct: 362 TFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPI 421
Query: 210 WIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGH 261
+ LY ++N+ LL F WI LS G + +SW +LPF+
Sbjct: 422 FFALYSLVNNLF---LLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMF 478
Query: 262 PPLG 265
LG
Sbjct: 479 TQLG 482
>gi|51473293|ref|YP_067050.1| inner membrane protein translocase component YidC [Rickettsia typhi
str. Wilmington]
gi|383752069|ref|YP_005427169.1| membrane protein insertase [Rickettsia typhi str. TH1527]
gi|383842904|ref|YP_005423407.1| membrane protein insertase [Rickettsia typhi str. B9991CWPP]
gi|81692326|sp|Q68XS4.1|YIDC_RICTY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington]
gi|380758712|gb|AFE53947.1| membrane protein insertase [Rickettsia typhi str. TH1527]
gi|380759551|gb|AFE54785.1| membrane protein insertase [Rickettsia typhi str. B9991CWPP]
Length = 558
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 336 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 389
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y ++ R+ E LY+++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 390 NLQPEIDRIKNLYNNDKARLNQEIMALYKKSKVNPVAGCLPILVQIPVFFSIYKVLY-VT 448
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E + WI LS PTTI + LLPF PP A +++ + +
Sbjct: 449 IEMRHAPFYGWIKDLSSPDPTTIF------NLFGLLPFA---PPSFLMIGAWPILMAITM 499
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S EL P QA+
Sbjct: 500 FLHQKMSPELADPIQAQ 516
>gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8]
gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8]
Length = 544
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 515
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+FG + + + +L + D + +++G AII+LTV++++ FPL K +++ M
Sbjct: 311 GFFGILGKPLFLLLHFIYDFV------HNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMA 364
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+L P+++ ++++YA + ++++ E +LY +AG NP++GCLP LA IP++I LY L
Sbjct: 365 DLAPEMEKLKKKYAKDPQKLREEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVL 420
>gi|410629282|ref|ZP_11339986.1| inner membrane protein oxaA [Glaciecola mesophila KMM 241]
gi|410151078|dbj|GAC26755.1| inner membrane protein oxaA [Glaciecola mesophila KMM 241]
Length = 543
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTK Q ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 353 NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 413 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLS 459
>gi|403509438|ref|YP_006641076.1| membrane insertase, YidC/Oxa1 family domain protein [Nocardiopsis
alba ATCC BAA-2165]
gi|402798887|gb|AFR06297.1| membrane insertase, YidC/Oxa1 family domain protein [Nocardiopsis
alba ATCC BAA-2165]
Length = 312
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+LLT ++++ PL KQ+ + MQ +QPKI +++RY ++ER+Q E+ +L
Sbjct: 31 WAWGLSIVLLTCLMRLLMVPLFVKQMNTQRKMQEVQPKIMKLRERYKHDKERLQRESMKL 90
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Y+++G NP+ GCLP L +PV+ L+ L +VA EG + GF
Sbjct: 91 YQESGTNPIMGCLPLLLQMPVFFALFSVLRSVA-EGKVQFGF 131
>gi|420460931|ref|ZP_14959726.1| inner membrane protein oxaA [Helicobacter pylori Hp A-27]
gi|393074505|gb|EJB75264.1| inner membrane protein oxaA [Helicobacter pylori Hp A-27]
Length = 544
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHIMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|347761814|ref|YP_004869375.1| translocase inner membrane component [Gluconacetobacter xylinus
NBRC 3288]
gi|347580784|dbj|BAK85005.1| translocase inner membrane component [Gluconacetobacter xylinus
NBRC 3288]
Length = 586
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + VL L + ++G A++ T++VK FPL KQ S M+
Sbjct: 339 GWFAFLTRPIFTVLDWLNTMLG------NFGLALMAFTLLVKALFFPLATKQFHSMGKMR 392
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKIKA+++RY +Q + + LY+Q GVNP +GCLP L IPV+ LY+ L V
Sbjct: 393 QLQPKIKALRERYKDDQMALNQQMIGLYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VT 451
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PT +
Sbjct: 452 IEMRHAPFFGWIHDLSAFDPTNL 474
>gi|109946792|ref|YP_664020.1| inner membrane protein translocase component YidC [Helicobacter
acinonychis str. Sheeba]
gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba]
Length = 546
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT++V++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIILLTIVVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQANMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLFM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|46446715|ref|YP_008080.1| inner membrane protein translocase component YidC [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400356|emb|CAF23805.1| putative 60 kDa inner-membrane protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 866
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A Q GWF FISE L IL ++ S+ +I+LLTV +++ +PL +
Sbjct: 610 ACQTMHGWFTFISEPFAKFLLILMKFFH--YLTNSWALSIVLLTVSLRLMLYPLNTWSTK 667
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S + MQ + P++ AIQ++Y + ++ QLE LYR+ GVNP +GCLP L +P IG++
Sbjct: 668 SMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMPFLIGMFD 727
Query: 216 AL-SNVANEGL-LTEGFFWIPSLSGPTTI 242
L S+ A G G WI L+ P +
Sbjct: 728 LLKSSFALRGAPFISG--WIDDLTAPDVL 754
>gi|398827985|ref|ZP_10586187.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Phyllobacterium sp. YR531]
gi|398218703|gb|EJN05205.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Phyllobacterium sp. YR531]
Length = 615
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+E M +++ L I ++G AI+++TVI+K FPL K S M+
Sbjct: 371 GWFYFITEPMFYLIDWLYKAIG------NFGVAILVVTVILKALFFPLANKSYASMARMK 424
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+ I+++YA ++ + Q LY+ +NP+AGC P L IPV+ LY+ L V
Sbjct: 425 LVQPKMTEIREKYADDKVKQQQAMMELYKTEKINPIAGCWPILIQIPVFFALYKVLY-VT 483
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLP 256
E F WI L+ P + I W +P
Sbjct: 484 IEMRHAPFFGWIQDLAAPDPTSIFNLFGLIPWTVP 518
>gi|408825558|ref|ZP_11210448.1| inner membrane protein translocase component YidC [Streptomyces
somaliensis DSM 40738]
Length = 404
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 101 GGWFGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVEST 157
G F FI+ + +++ A+ P +++G +I+ L +++++ PL KQ++S
Sbjct: 5 GNLFSFITGPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVIVIRICLIPLFVKQIKSM 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
MQ LQPK+KAIQ+RY +++R E +LY++ G NPL+ CLP L P + LY L
Sbjct: 65 RNMQALQPKMKAIQERYKNDRQRQSEEMMKLYKETGTNPLSSCLPILLQSPFFFALYHVL 124
Query: 218 SNVAN 222
S +A+
Sbjct: 125 SKIAS 129
>gi|410641023|ref|ZP_11351548.1| inner membrane protein oxaA [Glaciecola chathamensis S18K6]
gi|410647420|ref|ZP_11357852.1| inner membrane protein oxaA [Glaciecola agarilytica NO2]
gi|410133010|dbj|GAC06251.1| inner membrane protein oxaA [Glaciecola agarilytica NO2]
gi|410139383|dbj|GAC09735.1| inner membrane protein oxaA [Glaciecola chathamensis S18K6]
Length = 543
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTK Q ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 353 NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 413 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLS 459
>gi|343507252|ref|ZP_08744694.1| putative inner membrane protein translocase component YidC [Vibrio
ichthyoenteri ATCC 700023]
gi|342800272|gb|EGU35812.1| putative inner membrane protein translocase component YidC [Vibrio
ichthyoenteri ATCC 700023]
Length = 539
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L + + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHSLLSFIHGFVG------NWGVAIIFLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLAAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|385218105|ref|YP_005779581.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F16]
gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F16]
Length = 546
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GTSMYW 474
>gi|188587521|ref|YP_001919066.1| 60 kDa inner membrane insertion protein [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179352208|gb|ACB86478.1| 60 kDa inner membrane insertion protein [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 213
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AI++LT+ V+ TFPL KQ++ST MQ LQP++K +Q++Y ++E + +T L+
Sbjct: 22 SYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKKLQEKYKDDKETLNKKTMELW 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN------------EGLLTEGFFWIPSLS 237
++ VNP AGCLP + +PV I +++ L + + ++ FF +P L+
Sbjct: 82 KKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVDPVFLGIDLSQSDPFFILPILA 141
Query: 238 GPTTIAARQ 246
G TT ++
Sbjct: 142 GGTTFLQQK 150
>gi|32265611|ref|NP_859643.1| inner membrane protein translocase component YidC [Helicobacter
hepaticus ATCC 51449]
gi|38502920|sp|Q7VJY0.1|YIDC_HELHP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus
ATCC 51449]
Length = 591
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 31/160 (19%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AI+LLT+IV++ +PLT K + S +++L PK+K +Q RY + +++Q+ LY
Sbjct: 387 NWGWAIVLLTLIVRIVLYPLTYKGMVSMQKLKDLAPKMKDLQTRYKDDPQKLQIHMMDLY 446
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NPL GCLP + IPV+ +Y+ L N A E + WI LS
Sbjct: 447 KKHGANPLGGCLPLILQIPVFFAIYRVLHN-AVELKSSAWILWITDLSA----------- 494
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMEL 289
+D Y VLPVL+ VS Y S +L
Sbjct: 495 --------ID-----------PYFVLPVLMGVSMYISQKL 515
>gi|332308616|ref|YP_004436467.1| YidC/Oxa1 family membrane protein insertase [Glaciecola sp.
4H-3-7+YE-5]
gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Glaciecola sp. 4H-3-7+YE-5]
Length = 543
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTK Q ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 353 NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ VNP+ GC P L +P+++ LY L + E + FWI LS
Sbjct: 413 KKDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDLS 459
>gi|420402904|ref|ZP_14902090.1| inner membrane protein oxaA [Helicobacter pylori CPY6261]
gi|393020070|gb|EJB21209.1| inner membrane protein oxaA [Helicobacter pylori CPY6261]
Length = 545
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 349 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 408
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 409 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 467
Query: 248 GSGISW 253
G+ + W
Sbjct: 468 GASMYW 473
>gi|257127031|ref|YP_003165145.1| hypothetical protein Lebu_2303 [Leptotrichia buccalis C-1013-b]
gi|257050970|gb|ACV40154.1| 60 kDa inner membrane insertion protein [Leptotrichia buccalis
C-1013-b]
Length = 228
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
Query: 107 ISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
I ++FV+ +LK A++ V +YG AII++T ++++ FPLT KQ +S M++LQP
Sbjct: 4 IQALVDFVVHVLK----AINGVVGNYGIAIIIVTFLMRIIVFPLTLKQEKSMKKMRDLQP 59
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+++ I++++ N + +Q T+ +Y++ GVNPL GCLP L +P+++ LY A
Sbjct: 60 ELEKIKEKHKDNPQELQRRTAEIYKENGVNPLGGCLPLLIQMPIFVALYYAF 111
>gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori HPAG1]
gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1]
Length = 548
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELSPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|384214937|ref|YP_005606101.1| hypothetical protein BJ6T_12220 [Bradyrhizobium japonicum USDA 6]
gi|354953834|dbj|BAL06513.1| hypothetical protein BJ6T_12220 [Bradyrhizobium japonicum USDA 6]
Length = 614
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 367 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 419
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++R+ ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 420 KSIQPQLQALKERFPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 478
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E + WI LS P
Sbjct: 479 TIEMRHAPFYGWIKDLSAP 497
>gi|420410774|ref|ZP_14909910.1| inner membrane protein oxaA [Helicobacter pylori NQ4200]
gi|393025987|gb|EJB27087.1| inner membrane protein oxaA [Helicobacter pylori NQ4200]
Length = 550
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 354 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 413
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 414 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 472
Query: 248 GSGISW 253
G+ + W
Sbjct: 473 GASMYW 478
>gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1]
gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1]
Length = 544
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 17/163 (10%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
M+ V+++ D I P ++G +II LT++V+V FPLT K +T + LQP++K +
Sbjct: 329 MQMVMQVFYDVI-----P-NWGLSIIFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKEL 382
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q ++ + +++ E RLY++ GVNPL GCLP + +P++ LY ++N+ LL
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLF---LLRGAS 439
Query: 231 F---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
F WI LS G + +SW +LPF+ LG
Sbjct: 440 FIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|425790385|ref|YP_007018302.1| membrane protein insertase [Helicobacter pylori Aklavik86]
gi|425628700|gb|AFX89240.1| membrane protein insertase [Helicobacter pylori Aklavik86]
Length = 547
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 351 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 410
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 411 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 469
Query: 248 GSGISW 253
G+ + W
Sbjct: 470 GASMYW 475
>gi|421712561|ref|ZP_16151893.1| inner membrane protein oxaA [Helicobacter pylori R32b]
gi|407217362|gb|EKE87195.1| inner membrane protein oxaA [Helicobacter pylori R32b]
Length = 548
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|291303914|ref|YP_003515192.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
DSM 44728]
gi|290573134|gb|ADD46099.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
DSM 44728]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
A++ + + AI+ L V +++ FPL KQ++S AMQ LQPK+K +QQRY G++E +Q
Sbjct: 34 ALNTSWQWILAIVFLVVTIRIVLFPLFVKQIKSQRAMQRLQPKMKELQQRYKGDRETLQK 93
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
E LYR NPL GCLP L PV+I L L +
Sbjct: 94 EMMELYRTEKANPLMGCLPMLLQAPVFIALLWVLRRI 130
>gi|384893416|ref|YP_005767509.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Cuz20]
gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Cuz20]
Length = 547
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 351 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 410
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 411 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 469
Query: 248 GSGISW 253
G+ + W
Sbjct: 470 GASMYW 475
>gi|257065515|ref|YP_003145187.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM
20476]
gi|256793168|gb|ACV23838.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM
20476]
Length = 257
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+G AII++TVI +V P+ Q++S+ MQ +QP ++ IQ +YA +Q R+Q E +LY
Sbjct: 22 DWGLAIIIITVIFRVIVSPIMHSQIKSSYQMQKVQPLMQEIQTKYANDQARMQEEMQKLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEG 224
+ NPLAGCLP +P++I ++Q L +A+ G
Sbjct: 82 AETHFNPLAGCLPMFLQMPIFIAMFQTLRELASHG 116
>gi|383483421|ref|YP_005392334.1| membrane protein insertase [Rickettsia parkeri str. Portsmouth]
gi|378935775|gb|AFC74275.1| membrane protein insertase [Rickettsia parkeri str. Portsmouth]
Length = 560
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+G++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSGDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E + WI LS PTTI + LLPF PP A +++ + +
Sbjct: 451 IEMRQAPFYGWIKDLSASDPTTIF------NLFGLLPF---SPPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E P QA+
Sbjct: 502 FLQQKMSPEPADPMQAQ 518
>gi|420479875|ref|ZP_14978519.1| inner membrane protein oxaA [Helicobacter pylori Hp P-1]
gi|420510272|ref|ZP_15008762.1| inner membrane protein oxaA [Helicobacter pylori Hp P-1b]
gi|393097788|gb|EJB98380.1| inner membrane protein oxaA [Helicobacter pylori Hp P-1]
gi|393122013|gb|EJC22490.1| inner membrane protein oxaA [Helicobacter pylori Hp P-1b]
Length = 548
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|315122061|ref|YP_004062550.1| inner membrane protein translocase component YidC [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC
[Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 578
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M ++ + + ++G AI+L T+ VK FPL KKQ ST M+
Sbjct: 334 GWFYFIAKPMFALMSYFYNLVG------NFGIAIMLTTIFVKALFFPLAKKQYVSTANMK 387
Query: 162 NLQPKIKAIQQRYA-GNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
N+QPKI A+++++ + + +Q E +LY+ +NPLAGC P L IPV+ +Y+ +S +
Sbjct: 388 NIQPKIDALREKFKQASPQVLQKEMLQLYKTHKINPLAGCWPILLQIPVFFAIYKVIS-I 446
Query: 221 ANEGLLTEGFFWIPSLSGP 239
+ E F WI L+ P
Sbjct: 447 SLEMRHAPFFGWIQDLAAP 465
>gi|226326926|ref|ZP_03802444.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198]
gi|225204763|gb|EEG87117.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Proteus penneri ATCC 35198]
Length = 322
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S
Sbjct: 105 DYGWLWFISQPLFKLLKFLHSFIG------NWGFSIIMITFIVRGIMYPLTKAQYTSMAK 158
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQPK+ A+++R +++R+ E LY+Q VNPL GCLP + +P+++ LY L
Sbjct: 159 MRLLQPKLAALRERIGDDKQRMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYML 216
>gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris HaA2]
gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2]
Length = 629
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L H+ ++G AI+L+TV++KV PL K S M+
Sbjct: 380 GWFYFITKPMFLALDFF------FHLVGNFGVAILLVTVLIKVLFLPLANKSYASMAKMK 433
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A+++R+ ++ + Q E +YR+ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 434 AIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VT 492
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E F WI LS PT + + LLPF P+ H YLVL P
Sbjct: 493 IEMRHAPFFGWIHDLSAADPTNL------FNLFGLLPFDPTAIPVLGH----YLVLGVWP 542
Query: 277 VLLVVSQYASMELMKPP 293
+++ + + M+L P
Sbjct: 543 LVMGFTMWFQMKLNPQP 559
>gi|408357772|ref|YP_006846303.1| membrane protein OxaA [Amphibacillus xylanus NBRC 15112]
gi|407728543|dbj|BAM48541.1| membrane protein OxaA [Amphibacillus xylanus NBRC 15112]
Length = 255
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLET 185
SYG+AII++T++++ PL KQ++S+ AMQ +QPKIK +Q++Y A QE+++ E
Sbjct: 59 SYGWAIIIVTILIRSLLVPLNIKQLKSSQAMQQIQPKIKELQEKYSSKDAKTQEKLREEQ 118
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW 232
+L+++ VNP+AGCLP +P+ I LYQ++ + GL F W
Sbjct: 119 MKLFQEHNVNPMAGCLPMFVQMPIMIALYQSI--MRTPGLKEGTFLW 163
>gi|384888295|ref|YP_005762806.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori 52]
gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori 52]
Length = 544
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|386751799|ref|YP_006225019.1| membrane protein insertase [Helicobacter pylori Shi417]
gi|384558057|gb|AFH98525.1| membrane protein insertase [Helicobacter pylori Shi417]
Length = 544
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|408379917|ref|ZP_11177508.1| membrane protein insertase [Agrobacterium albertimagni AOL15]
gi|407746294|gb|EKF57819.1| membrane protein insertase [Agrobacterium albertimagni AOL15]
Length = 596
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M ++ H+ ++G AI+L T++VK+ FPL KQ S M+
Sbjct: 352 GWFYFITKPMFHLMDYF------FHLVGNFGVAILLTTIVVKLLFFPLANKQYASMANMK 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK++ ++ +YA ++ +Q LY++ +NP+AGC P L IPV+ LY+ + V
Sbjct: 406 RVQPKLEELKTKYADDRMGLQQAMMALYKEEKINPVAGCWPVLLQIPVFFALYKVIY-VT 464
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 465 IEMRHAPFFGWIQDLSAP 482
>gi|385249860|ref|YP_005778079.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F57]
gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F57]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420396029|ref|ZP_14895251.1| inner membrane protein oxaA [Helicobacter pylori CPY1124]
gi|393011008|gb|EJB12197.1| inner membrane protein oxaA [Helicobacter pylori CPY1124]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|357383146|ref|YP_004897870.1| inner membrane protein translocase component YidC, long form
[Pelagibacterium halotolerans B2]
gi|351591783|gb|AEQ50120.1| inner membrane protein translocase component YidC, long form
[Pelagibacterium halotolerans B2]
Length = 608
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +++++L + + ++G AI+ +TVIVK FPL K S M+
Sbjct: 358 GWFHFITKPMFYLIRLLFEFLG------NFGLAILAVTVIVKAIFFPLANKSYASMANMR 411
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+K IQ+++ ++ Q LY+ +NP++GC P L IPV+ LY+ L V
Sbjct: 412 RVQPKMKEIQEKHKDDRAAQQQAMMELYKTEKINPISGCWPILIQIPVFFALYKVLF-VT 470
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLPVL 278
E F WI L+ P + LLP+ P+ ++L + PV+
Sbjct: 471 IEMRHAPFFGWIQDLAAPDPTHI----FNLFGLLPYDPSAVPV----IGSFLAIGIWPVI 522
Query: 279 LVVSQYASMELMKPP 293
+ ++ + M L PP
Sbjct: 523 MGITMWVQMRLNPPP 537
>gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|384899682|ref|YP_005775062.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F30]
gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F30]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
3_1_syn3]
gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
3_1_syn3]
Length = 551
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G F I++ + ++L+ + +++G AIILLT+++K +PLT K S M+
Sbjct: 332 GMFSIIAKGLLWLLEFFHKYV------HNWGVAIILLTIVIKAVFWPLTAKSYASMEKMK 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + AI+++Y N+E + E LY+ GVNP +GC+P L +PV+ GLYQAL
Sbjct: 386 KLQPMMTAIREKYKDNKELMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQAL 441
>gi|421720485|ref|ZP_16159765.1| inner membrane protein oxaA [Helicobacter pylori R046Wa]
gi|407219077|gb|EKE88894.1| inner membrane protein oxaA [Helicobacter pylori R046Wa]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|421496348|ref|ZP_15943580.1| Membrane protein insertase YidC [Aeromonas media WS]
gi|407184612|gb|EKE58437.1| Membrane protein insertase YidC [Aeromonas media WS]
Length = 537
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 324 GWLWFIAQPLHWLLTVFHGFVQ------NWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMR 377
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 378 MLQPKLAALKERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 433
>gi|345892377|ref|ZP_08843199.1| hypothetical protein HMPREF1022_01859 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047279|gb|EGW51145.1| hypothetical protein HMPREF1022_01859 [Desulfovibrio sp.
6_1_46AFAA]
Length = 551
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G F I++ + ++L+ + +++G AIILLT+++K +PLT K S M+
Sbjct: 332 GMFSIIAKGLLWLLEFFHKYV------HNWGVAIILLTIVIKAVFWPLTAKSYASMEKMK 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + AI+++Y N+E + E LY+ GVNP +GC+P L +PV+ GLYQAL
Sbjct: 386 KLQPMMTAIREKYKDNKELMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQAL 441
>gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299]
gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter
nitrofigilis DSM 7299]
Length = 548
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ M L+ L+ I ++G+ I+ T+I+K+ FPL+ K + S ++
Sbjct: 328 GWFTFIANPMFLFLQFLQSYIG------NWGWTIVFATIIIKLILFPLSYKGMMSMQKLK 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
+L PKIK +Q++Y G++++ LY++ G NP+ GCLP + IPV+ LY+ + N
Sbjct: 382 DLAPKIKELQEKYKGDKQKQSAHMMELYKKHGANPMGGCLPLIMQIPVFFALYRVILN 439
>gi|387782966|ref|YP_005793679.1| inner membrane protein [Helicobacter pylori 51]
gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori P12]
gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori
P12]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420405770|ref|ZP_14904943.1| inner membrane protein oxaA [Helicobacter pylori CPY6271]
gi|393021589|gb|EJB22719.1| inner membrane protein oxaA [Helicobacter pylori CPY6271]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|421888618|ref|ZP_16319703.1| fragment of cytoplasmic insertase, essential for proper integration
of ATPase into the membrane (part 2) [Ralstonia
solanacearum K60-1]
gi|378966050|emb|CCF96451.1| fragment of cytoplasmic insertase, essential for proper integration
of ATPase into the membrane (part 2) [Ralstonia
solanacearum K60-1]
Length = 464
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW I++ + ++L + +H ++G++I+ LTV++K+ FPL+ S
Sbjct: 248 KDYGWLTVIAKPLFWLL-------EKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSM 300
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP L IPV++ LY AL
Sbjct: 301 AKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWAL 360
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 361 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 385
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + +L P
Sbjct: 386 ILPILMAVSMFVQTKLNPTP 405
>gi|372267019|ref|ZP_09503067.1| inner membrane protein, 60 kDa [Alteromonas sp. S89]
Length = 551
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW ++++ M VL + + H+ ++G+AIILLTV +K +PL+ ++S M+
Sbjct: 342 GWLWWLAKPMFRVLHWIHE-----HLVANWGWAIILLTVFIKALLYPLSAAGLKSMARMR 396
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
P++K +Q++Y N++++ ET +LYR+ +NP+ GCLP L +PV+IGLY L
Sbjct: 397 KFAPQMKKLQEQYKDNRQKLAEETMKLYRREKINPVGGCLPILLQMPVFIGLYWML 452
>gi|384890131|ref|YP_005764433.1| inner membrane protein translocase component YidC [Helicobacter
pylori v225d]
gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter
pylori v225d]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
BL2]
gi|254773006|sp|B8EPG5.1|YIDC_METSB RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
BL2]
Length = 600
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ M +L L + ++G AI+L TVIVK FPL K S M+
Sbjct: 352 GWFYFITRPMFRLLHFL------YSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMK 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ P+I A++++Y ++ + Q ET LY++ +NP++GCLP L IPV+ LY+ L V
Sbjct: 406 AVAPEIAALREKYPEDKMKQQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLF-VT 464
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E F WI LS P + + LLPF PL H A V P+L+ V
Sbjct: 465 IEMRHAPFFGWIHDLSAPDPT----NLFNLFGLLPFDPTQLPLIGH-FLAIGVWPLLMGV 519
Query: 282 SQYASME 288
S + M+
Sbjct: 520 SMFVQMK 526
>gi|420417768|ref|ZP_14916863.1| inner membrane protein oxaA [Helicobacter pylori NQ4044]
gi|393030949|gb|EJB32022.1| inner membrane protein oxaA [Helicobacter pylori NQ4044]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|402851811|ref|ZP_10899939.1| Inner membrane protein translocase component YidC, long form
[Rhodovulum sp. PH10]
gi|402497919|gb|EJW09703.1| Inner membrane protein translocase component YidC, long form
[Rhodovulum sp. PH10]
Length = 614
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 22/199 (11%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF FI++ M +V+ L +++G AI+L+TV++K FPL K S
Sbjct: 363 DWGWFYFITKPMFWVIDFL------FQWTHNFGIAILLVTVLIKGVFFPLANKSYASMAK 416
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M++ QP+++ I++R+ ++ + Q E LY++ +NP+AGC P L IPV+ LY+ L
Sbjct: 417 MKSFQPQMQQIKERFPDDKVKQQQELMDLYKREKINPIAGCWPVLIQIPVFFSLYKVLF- 475
Query: 220 VANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL-- 275
+ E F WI LS PTT+ + LLPF P+ ++L L
Sbjct: 476 ITIEMRHAPFFGWIHDLSAPDPTTVF------NLFGLLPFDPMMVPM----IGSFLHLGA 525
Query: 276 -PVLLVVSQYASMELMKPP 293
P+++ V+ + M+L P
Sbjct: 526 WPLIMGVTMWVQMQLNPTP 544
>gi|336054983|ref|YP_004563270.1| Stage III sporulation protein J [Lactobacillus kefiranofaciens ZW3]
gi|333958360|gb|AEG41168.1| Stage III sporulation protein J [Lactobacillus kefiranofaciens ZW3]
Length = 291
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADGAT----QKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G A+ A+G + +G W+ ++S + ++ K++ +
Sbjct: 18 ALITLVVVLTGCATQGANGQSAPISHNSGNWWDRWVVYYMSAFILWLAKLMSN------- 70
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ T+I +V PL + ST MQN+QP+I ++++Y G +Q
Sbjct: 71 --SYGWAIIIFTIIARVILLPLNAISIRSTTKMQNIQPQINELRKKYPGRDTESRTLLQQ 128
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ETS+LY++AGVNP GCLP L +PV LY A+ L G F LS P
Sbjct: 129 ETSKLYKEAGVNPYTGCLPVLIQLPVMYALYGAILRTPQ---LQNGHFLWMDLSKP 181
>gi|420421131|ref|ZP_14920213.1| inner membrane protein oxaA [Helicobacter pylori NQ4161]
gi|393035067|gb|EJB36116.1| inner membrane protein oxaA [Helicobacter pylori NQ4161]
Length = 548
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|420407578|ref|ZP_14906742.1| inner membrane protein oxaA [Helicobacter pylori CPY6311]
gi|393021036|gb|EJB22170.1| inner membrane protein oxaA [Helicobacter pylori CPY6311]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420401110|ref|ZP_14900309.1| inner membrane protein oxaA [Helicobacter pylori CPY3281]
gi|393016718|gb|EJB17877.1| inner membrane protein oxaA [Helicobacter pylori CPY3281]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|420402550|ref|ZP_14901738.1| inner membrane protein oxaA [Helicobacter pylori CPY6081]
gi|393016017|gb|EJB17177.1| inner membrane protein oxaA [Helicobacter pylori CPY6081]
Length = 546
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|343511666|ref|ZP_08748821.1| putative inner membrane protein translocase component YidC [Vibrio
scophthalmi LMG 19158]
gi|342797401|gb|EGU33051.1| putative inner membrane protein translocase component YidC [Vibrio
scophthalmi LMG 19158]
Length = 539
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L + + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHSLLSFIHGFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLAAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|343515738|ref|ZP_08752788.1| putative inner membrane protein translocase component YidC [Vibrio
sp. N418]
gi|342797694|gb|EGU33335.1| putative inner membrane protein translocase component YidC [Vibrio
sp. N418]
Length = 539
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L + + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 327 GWLWFIAKPLHSLLSFIHGFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 381 MLQPKLAAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL--ME 438
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 439 SVELRHSPFFGWIHDLSA 456
>gi|420397883|ref|ZP_14897096.1| inner membrane protein oxaA [Helicobacter pylori CPY1962]
gi|393014557|gb|EJB15728.1| inner membrane protein oxaA [Helicobacter pylori CPY1962]
Length = 546
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|385219705|ref|YP_005781180.1| membrane protein insertase [Helicobacter pylori Gambia94/24]
gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24]
Length = 547
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|163803611|ref|ZP_02197477.1| putative inner membrane protein translocase component YidC [Vibrio
sp. AND4]
gi|159172605|gb|EDP57463.1| putative inner membrane protein translocase component YidC [Vibrio
sp. AND4]
Length = 540
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 45/187 (24%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW F+++ + +L ++ + ++G AI+ LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFLAKPLHSLLAFIQSFVG------NWGIAIVCLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFISLYWALME-- 439
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LPV
Sbjct: 440 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPV 466
Query: 278 LLVVSQY 284
L+ VS +
Sbjct: 467 LMGVSMF 473
>gi|385229115|ref|YP_005789048.1| membrane protein insertase [Helicobacter pylori Puno120]
gi|344335553|gb|AEN15997.1| membrane protein insertase [Helicobacter pylori Puno120]
Length = 546
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|425789988|ref|YP_007017908.1| membrane protein insertase [Helicobacter pylori Aklavik117]
gi|425628303|gb|AFX91771.1| membrane protein insertase [Helicobacter pylori Aklavik117]
Length = 544
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|385226070|ref|YP_005785995.1| inner membrane protein OxaA [Helicobacter pylori 83]
gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83]
Length = 546
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|117617478|ref|YP_858698.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|166975847|sp|A0KQZ7.1|YIDC_AERHH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|117558885|gb|ABK35833.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 548
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L + + ++G AII+LT++V+ FPLTK Q S M+
Sbjct: 335 GWLWFIAQPLHWLLTVFHGFVQ------NWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMR 388
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R+ +++++ LY++ VNPL GCLP L +P++I LY AL
Sbjct: 389 MLQPKLAALRERFGDDRQKMSQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWAL 444
>gi|386754924|ref|YP_006228142.1| membrane protein insertase [Helicobacter pylori Shi112]
gi|384561182|gb|AFI01649.1| membrane protein insertase [Helicobacter pylori Shi112]
Length = 547
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 351 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 410
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 411 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 469
Query: 248 GSGISW 253
G+ + W
Sbjct: 470 GASMYW 475
>gi|383936078|ref|ZP_09989508.1| inner membrane protein oxaA [Rheinheimera nanhaiensis E407-8]
gi|383702834|dbj|GAB59599.1| inner membrane protein oxaA [Rheinheimera nanhaiensis E407-8]
Length = 545
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 13/145 (8%)
Query: 77 AAVSLDSASGGAASTSADGATQKNG-------GWFGFISEAMEFVLKILKDGIDAVHVPY 129
A V+L S T + A NG G+ FIS+ + ++L +++ V
Sbjct: 299 ATVTLGSTFYAGPKTQDNLAKLANGLDLTVDYGFLWFISQPLFWLLTLIQS------VVV 352
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AII++T+IVK +PLTK Q ES M+NL+PKI +Q RY +++++ LY
Sbjct: 353 NWGVAIIIITLIVKGLMYPLTKVQYESMAKMRNLKPKIDELQARYKDDRQKMGPAMMELY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLY 214
R+ VNP+ GCLP L +P+++ LY
Sbjct: 413 RKEKVNPMGGCLPMLIQMPIFLALY 437
>gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter
suis HS5]
gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter
suis HS5]
gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
Length = 547
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 77/118 (65%), Gaps = 4/118 (3%)
Query: 122 IDAVHV-PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER 180
+D +H +++G+AIILLT+IV++ +PL+ K + S +++L PK+K +Q++Y + ++
Sbjct: 345 LDYLHTYTHNWGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQEKYKSDPQK 404
Query: 181 IQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF-FWIPSLS 237
+Q+ +LY++ G NPL GCLP L IPV+ +Y+ L N L + G+ WI LS
Sbjct: 405 LQMHMMQLYKKHGANPLGGCLPILLQIPVFFAIYRVLYNAVE--LKSAGWMLWIHDLS 460
>gi|384895221|ref|YP_005769210.1| inner membrane protein OxaA [Helicobacter pylori 35A]
gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A]
Length = 546
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas
atlantica T6c]
gi|123360110|sp|Q15MS7.1|YIDC_PSEA6 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c]
Length = 543
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++GF+IIL+T++VK A +PLTK Q ES M+ L+PK+ A+++RY +++++Q +Y
Sbjct: 353 NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMY 412
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF-FWIPSLS 237
++ VNP+ GC P L +P+++ LY L + + L F FWI LS
Sbjct: 413 KKDKVNPMGGCFPLLLQMPIFLALYWVL--LESVELRHANFIFWITDLS 459
>gi|393722480|ref|ZP_10342407.1| membrane protein insertase [Sphingomonas sp. PAMC 26605]
Length = 584
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIILLTV ++ FP+ ++Q S AM+ +QPK+KAIQ+++ ++ R Q E LY
Sbjct: 374 NFGVAIILLTVTIRTLIFPVAQRQFASMAAMKAIQPKMKAIQEKHKDDKARAQQEVMALY 433
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQAL 217
+ VNPLAGCLPTL IP+ LY+ L
Sbjct: 434 KAEKVNPLAGCLPTLIQIPIMYSLYKVL 461
>gi|114778885|ref|ZP_01453682.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans
PV-1]
gi|114550854|gb|EAU53420.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans
PV-1]
Length = 435
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 45/198 (22%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF FIS+ M L L + ++GF IILL + +K+ F T+K ES A
Sbjct: 227 NYGWFAFISKPMHSFLLWLYTYVG------NFGFCIILLVLSIKILFFWPTQKSYESMAA 280
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP++ +++ Y +++++ E LY++ VNP+ GCLP + IPV+ LY+ L
Sbjct: 281 MRKLQPEMARMKELYGDDRQKMSQEMMALYKKHKVNPMGGCLPIIIQIPVFFALYKVLL- 339
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVL 275
+I RQ+ PF+ GW HD + Y VL
Sbjct: 340 --------------------MSIEMRQA--------PFI------GWIHDMSVQDPYFVL 365
Query: 276 PVLLVVSQYASMELMKPP 293
PVL+ +S + L P
Sbjct: 366 PVLMGISMFVQQRLNPTP 383
>gi|440233154|ref|YP_007346947.1| preprotein translocase subunit YidC [Serratia marcescens FGI94]
gi|440054859|gb|AGB84762.1| preprotein translocase subunit YidC [Serratia marcescens FGI94]
Length = 545
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 20/183 (10%)
Query: 35 RLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASGGAASTSAD 94
+L + + + F+ P ++ + LNS L +A+ A LD
Sbjct: 275 KLGNDQSAIGFKSTPVVVQPGAQQQLNSTLWVGPELQDQMAELAPHLDLTV--------- 325
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
+ GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q
Sbjct: 326 -----DYGWLWFISQPLFKLLKFLHSFIG------NWGFSIIVITFIVRGIMYPLTKAQY 374
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
S M+ LQPK++A+++R +++R+ E LY+ VNPL GCLP L +P+++ LY
Sbjct: 375 TSMAKMRMLQPKLQAMRERIGDDKQRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALY 434
Query: 215 QAL 217
L
Sbjct: 435 YML 437
>gi|288818681|ref|YP_003433029.1| inner membrane protein [Hydrogenobacter thermophilus TK-6]
gi|384129432|ref|YP_005512045.1| YidC/Oxa1 family membrane protein insertase [Hydrogenobacter
thermophilus TK-6]
gi|288788081|dbj|BAI69828.1| inner membrane protein [Hydrogenobacter thermophilus TK-6]
gi|308752269|gb|ADO45752.1| membrane protein insertase, YidC/Oxa1 family [Hydrogenobacter
thermophilus TK-6]
Length = 501
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ F+I+ LT++V+V FPLT K S + + L PK++ I+++Y + ++Q E +LY
Sbjct: 306 SWVFSILALTLLVRVFMFPLTYKSTISMMKLSELAPKVQEIREKYKEDPTKMQEEMMKLY 365
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
Q G NP++GCLP + IPV+ LY+ L+ A+ L WIPSLS
Sbjct: 366 SQVGFNPMSGCLPMILQIPVFFALYKVLTITAD--LQLASMLWIPSLS 411
>gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
Length = 249
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++LAMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|408671059|ref|YP_006871130.1| inner membrane protein translocase [Borrelia garinii NMJW1]
gi|407240881|gb|AFT83764.1| putative inner membrane protein translocase [Borrelia garinii
NMJW1]
Length = 544
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
M+ V+++ D I P ++G +II LT++V++ FPLT K +T + LQPK+K +
Sbjct: 329 MQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q ++ + +++ E RLY++ GVNPL GC P + +P++ LY ++N+ LL
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLF---LLRGAS 439
Query: 231 F---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
F WI LS G + +SW +LPF+ LG
Sbjct: 440 FIPGWIDDLSIGDSVYHFGYRLYFVSWTDIRILPFIMMFTQLG 482
>gi|386853846|ref|YP_006203131.1| inner membrane protein translocase component YidC [Borrelia garinii
BgVir]
gi|365193880|gb|AEW68778.1| Putative inner membrane protein translocase component YidC
[Borrelia garinii BgVir]
Length = 544
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
M+ V+++ D I P ++G +II LT++V++ FPLT K +T + LQPK+K +
Sbjct: 329 MQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q ++ + +++ E RLY++ GVNPL GC P + +P++ LY ++N+ LL
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLF---LLRGAS 439
Query: 231 F---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
F WI LS G + +SW +LPF+ LG
Sbjct: 440 FIPGWIDDLSIGDSVYHFGYRLYFVSWTDIRILPFIMMFTQLG 482
>gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC
[Rickettsia massiliae MTU5]
gi|166977409|sp|A8F0F4.1|YIDC_RICM5 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5]
Length = 560
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E T + WI LS PTTI + LLPF PP A +++ + +
Sbjct: 451 IEMRQTPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E P QA+
Sbjct: 502 FLQQKMSPEPADPMQAQ 518
>gi|149182294|ref|ZP_01860773.1| OxaA-like protein precursor [Bacillus sp. SG-1]
gi|148849986|gb|EDL64157.1| OxaA-like protein precursor [Bacillus sp. SG-1]
Length = 238
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 23/166 (13%)
Query: 97 TQKNGG-WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
T+ N G W +I + ++ + + D SYG II++T+I+++A PL KQ +
Sbjct: 8 TEDNTGFWNEYIVYPLSLLIIKVSEFFDG-----SYGLGIIIVTLIIRLAILPLMIKQTK 62
Query: 156 STLAMQNLQPKIKAIQQRY----AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWI 211
++ AMQ LQP+++ ++++Y A Q+++Q ET L+++ GVNPLAGC P + +P+ I
Sbjct: 63 NSKAMQALQPEMQKLREKYSSKDAQTQQKLQQETMGLFQKHGVNPLAGCFPLIVQMPILI 122
Query: 212 GLYQALSNVANEGLLTEGFFW-----------IPSLSGPTTIAARQ 246
G Y A+ V E + F W +P ++G TT ++
Sbjct: 123 GFYHAI--VRTEEIKNHTFLWFDLGQPDPLYLLPLIAGVTTFIQQK 166
>gi|386753355|ref|YP_006226574.1| membrane protein insertase [Helicobacter pylori Shi169]
gi|384559613|gb|AFI00081.1| membrane protein insertase [Helicobacter pylori Shi169]
Length = 544
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 348 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 408 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIYDLSIMDPYFILPLLM 466
Query: 248 GSGISW 253
G+ + W
Sbjct: 467 GASMYW 472
>gi|375008892|ref|YP_004982525.1| 60 kDa inner membrane insertion protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287741|gb|AEV19425.1| 60 kDa inner membrane insertion protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 249
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++LAMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|395206189|ref|ZP_10396755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
humerusii P08]
gi|422572618|ref|ZP_16648185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL044PA1]
gi|314929150|gb|EFS92981.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL044PA1]
gi|328905781|gb|EGG25557.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
humerusii P08]
Length = 359
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAENPKLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ V++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPES 216
>gi|197286946|ref|YP_002152818.1| inner membrane protein translocase component YidC [Proteus
mirabilis HI4320]
gi|227354814|ref|ZP_03839231.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus
mirabilis ATCC 29906]
gi|425070465|ref|ZP_18473578.1| inner membrane protein oxaA [Proteus mirabilis WGLW6]
gi|425070779|ref|ZP_18473885.1| inner membrane protein oxaA [Proteus mirabilis WGLW4]
gi|194684433|emb|CAR46145.1| inner membrane protein [Proteus mirabilis HI4320]
gi|227165132|gb|EEI49963.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus
mirabilis ATCC 29906]
gi|404594762|gb|EKA95318.1| inner membrane protein oxaA [Proteus mirabilis WGLW6]
gi|404599604|gb|EKB00057.1| inner membrane protein oxaA [Proteus mirabilis WGLW4]
Length = 546
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFLHSFIG------NWGFSIIMITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+ A+++R +++R+ E LY+Q VNPL GCLP + +P+++ LY L
Sbjct: 385 LLQPKLAALRERIGDDKQRMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYML 440
>gi|227902597|ref|ZP_04020402.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC
4796]
gi|227869686|gb|EEJ77107.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC
4796]
Length = 298
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADG----ATQKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G AS A+G + +G W+ ++S + ++ K++ +
Sbjct: 25 AVITLAVVLTGCASQGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGN------- 77
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ T+IV+V PL + ST MQ++QP+I ++++Y G +Q
Sbjct: 78 --SYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQ 135
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ET++LY++AGVNP GCLP + +PV LY A+ + L T F W+ LS P
Sbjct: 136 ETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 188
>gi|261420019|ref|YP_003253701.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
Y412MC61]
gi|297530020|ref|YP_003671295.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
C56-T3]
gi|319766834|ref|YP_004132335.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
Y412MC52]
gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
Y412MC61]
gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
C56-T3]
gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
Y412MC52]
Length = 249
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++LAMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
Length = 544
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 111 MEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAI 170
M+ V+++ D I P ++G +II LT++V++ FPLT K +T + LQPK+K +
Sbjct: 329 MQMVMQVFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 171 QQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF 230
Q ++ + +++ E RLY++ GVNPL GC P + +P++ LY ++N+ LL
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLF---LLRGAS 439
Query: 231 F---WIPSLS-GPTTIAARQSGSGISW----LLPFVDGHPPLG 265
F WI LS G + +SW +LPF+ LG
Sbjct: 440 FIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQLG 482
>gi|223041690|ref|ZP_03611886.1| inner membrane protein OxaA [Actinobacillus minor 202]
gi|198246541|gb|ACH82230.1| inner membrane protein OxaA [Actinobacillus minor 202]
Length = 554
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 89 ASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFP 148
A T+A + GW FI++ + ++L ++ V ++G AII +T++VK +P
Sbjct: 327 AETAAHLDLTADYGWAWFIAKPLFWLLTNIQ------KVVINWGLAIICVTIVVKTLLYP 380
Query: 149 LTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIP 208
LTK Q S M+ LQP+I+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P
Sbjct: 381 LTKAQYTSMAKMRMLQPRIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMP 440
Query: 209 VWIGLYQALSNVANEGLLTEGFF-WIPSLSG 238
++I LY L FF WI LS
Sbjct: 441 IFIALYWTFMEAVE--LRHAPFFGWIQDLSA 469
>gi|422441033|ref|ZP_16517846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA3]
gi|422473370|ref|ZP_16549851.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA2]
gi|313835175|gb|EFS72889.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA2]
gi|314970899|gb|EFT14997.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA3]
Length = 359
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAENPKLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ V++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPES 216
>gi|38502850|sp|O51829.1|YIDC_BUCMP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|2754805|gb|AAC04234.1| inner membrane protein [Buchnera aphidicola (Myzus persicae)]
Length = 240
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GW F+S+ + +L I+ I+ ++GF+IIL+T I+K+ T+PLTK Q S
Sbjct: 31 DYGWLWFLSQPLFKLLTIINSIIN------NWGFSIILITFIMKIITYPLTKSQYVSMSK 84
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
++ LQPKIK I++ ++ N++RI E LY++ +NPL G LP +PV++ LY L
Sbjct: 85 IRALQPKIKEIKEAFSDNKQRISQEMIILYKKEKINPLGGFLPVFIQMPVFLSLYYML 142
>gi|417841467|ref|ZP_12487571.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19501]
gi|341949505|gb|EGT76109.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19501]
Length = 542
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|17544723|ref|NP_518125.1| inner membrane protein translocase component YidC [Ralstonia
solanacearum GMI1000]
gi|38503108|sp|Q8Y3H6.1|YIDC_RALSO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|17427012|emb|CAD13532.1| putative preprotein translocase subunit yidc transmembrane
[Ralstonia solanacearum GMI1000]
Length = 553
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 45/199 (22%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
K+ GW I++ + ++L+ + + ++G++I+ LTV+VK+ FPL+ S
Sbjct: 337 KDYGWLTIIAKPLFWLLEKIHKLLG------NWGWSIVALTVLVKLVFFPLSATSYRSMA 390
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP + IPV+I LY L
Sbjct: 391 KMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFIALYWVLL 450
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLV 274
+++ R G P LGW HD A+ + +
Sbjct: 451 ---------------------SSVEMR--------------GAPWLGWVHDLASPDPFYI 475
Query: 275 LPVLLVVSQYASMELMKPP 293
LP+L+ VS + L P
Sbjct: 476 LPILMAVSMFVQTRLNPTP 494
>gi|429760959|ref|ZP_19293406.1| putative stage III sporulation protein J [Veillonella atypica KON]
gi|429176052|gb|EKY17457.1| putative stage III sporulation protein J [Veillonella atypica KON]
Length = 244
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 15/162 (9%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F ++ E M ++ + D V P SYG AII++TVI+K PLT KQ++S AMQ L
Sbjct: 30 FNYLVEFMRTLVTYAFNFTDMVGFP-SYGVAIIIITVIIKAILAPLTVKQIKSMKAMQEL 88
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QP++K +Q++Y + +R+Q E +Y++ GVNPLAGCLP L +P I ++ AL
Sbjct: 89 QPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYN 148
Query: 224 GLLTEGFFWIPSLSGP-------------TTIAARQSGSGIS 252
E F W+PSL T + +RQ+G G S
Sbjct: 149 PEF-EHFLWLPSLGEADPYYILPVLSALSTWLMSRQTGMGAS 189
>gi|354594313|ref|ZP_09012352.1| 60 kDa inner membrane insertion protein [Commensalibacter intestini
A911]
gi|353671989|gb|EHD13689.1| 60 kDa inner membrane insertion protein [Commensalibacter intestini
A911]
Length = 595
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + VL L + ++G A++ T+IVK +PL KQ S M+
Sbjct: 351 GWFAFLTYPIFIVLDWLNNFWG------NFGLALLTFTLIVKAVFYPLASKQFHSMGKMK 404
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+LQPK+K I+++Y +Q+ + + LY+ GVNP +GCLP L IP++ LY+ L V
Sbjct: 405 SLQPKMKEIREKYKDDQQLMNQQMMSLYKTQGVNPASGCLPILIQIPIFWCLYKDLY-VT 463
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 464 IEMRHAPFFGWIHDLSAP 481
>gi|257871385|ref|ZP_05651038.1| inner membrane protein [Enterococcus gallinarum EG2]
gi|357051627|ref|ZP_09112801.1| hypothetical protein HMPREF9478_02784 [Enterococcus saccharolyticus
30_1]
gi|257805549|gb|EEV34371.1| inner membrane protein [Enterococcus gallinarum EG2]
gi|355379551|gb|EHG26708.1| hypothetical protein HMPREF9478_02784 [Enterococcus saccharolyticus
30_1]
Length = 274
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 88 AASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A S + + Q +G W +I +K+L G + G IIL T+I+++
Sbjct: 22 ACSATGEVNAQSSGLWDRYIVYYFAEAIKMLSFG--------NAGIGIILFTLIIRIILM 73
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSRLYRQAGVNPLAGCLPT 203
PL Q +S Q LQPK+KA+QQ+YA Q +++ ET RLY + VNP AGCLP
Sbjct: 74 PLMHFQTKSMRKTQELQPKLKALQQQYASKDSETQNKLRAETQRLYAENNVNPYAGCLPL 133
Query: 204 LATIPVWIGLYQALSNVANEGLLTEG-FFWI 233
L +P+ + L+Q++S V L EG F W+
Sbjct: 134 LVQMPILMALWQSISRVPA---LQEGKFLWL 161
>gi|58338216|ref|YP_194801.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM]
gi|58255533|gb|AAV43770.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM]
Length = 291
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADG----ATQKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G AS A+G + +G W+ ++S + ++ K++ +
Sbjct: 18 AVITLAVVLTGCASQGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGN------- 70
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ T+IV+V PL + ST MQ++QP+I ++++Y G +Q
Sbjct: 71 --SYGWAIIVFTIIVRVILLPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQ 128
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ET++LY++AGVNP GCLP + +PV LY A+ + L T F W+ LS P
Sbjct: 129 ETNKLYKEAGVNPYTGCLPVIIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 181
>gi|420421217|ref|ZP_14920295.1| inner membrane protein oxaA [Helicobacter pylori NQ4110]
gi|393037735|gb|EJB38769.1| inner membrane protein oxaA [Helicobacter pylori NQ4110]
Length = 545
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|344168577|emb|CCA80871.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [blood disease bacterium R229]
Length = 554
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW I++ + ++L + +H+ ++G++I+ LTV+VK+ FPL+ S
Sbjct: 338 KDYGWLTIIAKPLFWLL-------EKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSM 390
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E +LYR VNPL GCLP + IPV+I LY L
Sbjct: 391 AKMKDLQPRMTAIRERHKGDPQKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVL 450
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 451 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 475
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + L P
Sbjct: 476 ILPILMAVSMFVQTRLNPTP 495
>gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 218
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 15/162 (9%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F ++ E M ++ + D V P SYG AII++TVI+K PLT KQ++S AMQ L
Sbjct: 4 FNYLVEFMRTLVTYAFNFTDMVGFP-SYGVAIIIITVIIKAILAPLTVKQIKSMKAMQEL 62
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QP++K +Q++Y + +R+Q E +Y++ GVNPLAGCLP L +P I ++ AL
Sbjct: 63 QPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYN 122
Query: 224 GLLTEGFFWIPSLSGP-------------TTIAARQSGSGIS 252
E F W+PSL T + +RQ+G G S
Sbjct: 123 PEF-EHFLWLPSLGEADPYYILPVLSALSTWLMSRQTGMGAS 163
>gi|448238074|ref|YP_007402132.1| transmembrane protein [Geobacillus sp. GHH01]
gi|445206916|gb|AGE22381.1| transmembrane protein [Geobacillus sp. GHH01]
Length = 249
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ +++AMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRASIAMQKLRPELMKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|344173153|emb|CCA88290.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia syzygii R24]
Length = 554
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW I++ + ++L + +H+ ++G++I+ LTV+VK+ FPL+ S
Sbjct: 338 KDYGWLTIIAKPLFWLL-------EKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSM 390
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E +LYR VNPL GCLP + IPV+I LY L
Sbjct: 391 AKMKDLQPRMTAIRERHKGDPQKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVL 450
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 451 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 475
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + L P
Sbjct: 476 ILPILMAVSMFVQTRLNPTP 495
>gi|403382755|ref|ZP_10924812.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JC66]
Length = 239
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 99 KNGGWFGF----ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQV 154
NG W + +S M+++ +I+ D YG +I+++T+I++ PLT KQ
Sbjct: 32 NNGIWDRYFVYPLSSFMDWLAEIMWD---------EYGLSILVVTIIIRFLILPLTLKQH 82
Query: 155 ESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLY 214
S+ MQ +QP++ I+++Y N ++ Q ET +L+++ VNPLAGC P L +P+ I LY
Sbjct: 83 RSSKQMQAIQPELLKIKEKYKDNVQKQQEETMKLFQKNNVNPLAGCFPLLVQMPILIALY 142
Query: 215 QALSNVANEGLLTEGFFWI 233
A+ + N + T F W+
Sbjct: 143 NAI--MRNSDIATHSFLWM 159
>gi|419839575|ref|ZP_14362981.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
haemolyticus HK386]
gi|386909153|gb|EIJ73829.1| membrane protein insertase, YidC/Oxa1 family [Haemophilus
haemolyticus HK386]
Length = 542
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|114327390|ref|YP_744547.1| hypothetical protein GbCGDNIH1_0726 [Granulibacter bethesdensis
CGDNIH1]
gi|122327634|sp|Q0BU78.1|YIDC_GRABC RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis
CGDNIH1]
Length = 578
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ + L L H+ ++G AI++ TV+VK A +PL K S M+
Sbjct: 343 GWFWFITRPFFYALDWL------YHLVGNFGVAILIFTVLVKAAFYPLASKSYRSMSKMR 396
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
L PKI+++++RY + R+Q E +LY+ G NP +GCLP L P++ LY+ + V
Sbjct: 397 LLAPKIQSLRERYKDDPTRMQQEVMQLYKAEGANPASGCLPMLLQFPIFFSLYKVIF-VT 455
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PT +
Sbjct: 456 IEMRHAPFFGWIHDLSAVDPTNL 478
>gi|417844583|ref|ZP_12490624.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21639]
gi|341956542|gb|EGT82963.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21639]
Length = 542
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|34557650|ref|NP_907465.1| inner membrane protein translocase component YidC [Wolinella
succinogenes DSM 1740]
gi|38502880|sp|P60037.1|YIDC_WOLSU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes]
Length = 536
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AI+LLT++V++ FPLT K + S ++++ PK+K IQ++Y G+ +++Q+ LY
Sbjct: 338 NWGWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKGDPQKLQVHMMELY 397
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ G NP+ GCLP L +P++ +Y+ L N A E + WI LS
Sbjct: 398 KKHGANPMGGCLPLLLQMPIFFAIYRVLYN-AIELKGADWILWINDLS 444
>gi|300692995|ref|YP_003753990.1| insertase [Ralstonia solanacearum PSI07]
gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum PSI07]
Length = 554
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW I++ + ++L + +H+ ++G++I+ LTV+VK+ FPL+ S
Sbjct: 338 KDYGWLTIIAKPLFWLL-------EKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSM 390
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E +LYR VNPL GCLP + IPV+I LY L
Sbjct: 391 AKMKDLQPRMTAIRERHKGDPQKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVL 450
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 451 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 475
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + L P
Sbjct: 476 ILPILMAVSMFVQTRLNPTP 495
>gi|289427470|ref|ZP_06429183.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes J165]
gi|386025284|ref|YP_005943590.1| membrane protein OxaA [Propionibacterium acnes 266]
gi|422383951|ref|ZP_16464092.1| membrane protein OxaA [Propionibacterium acnes HL096PA3]
gi|422429451|ref|ZP_16506356.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL072PA2]
gi|422448003|ref|ZP_16524735.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA3]
gi|422479198|ref|ZP_16555608.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL063PA1]
gi|422482048|ref|ZP_16558447.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA1]
gi|422488132|ref|ZP_16564463.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL013PA2]
gi|422489570|ref|ZP_16565897.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL020PA1]
gi|422497498|ref|ZP_16573771.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA3]
gi|422503701|ref|ZP_16579938.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL027PA2]
gi|422504422|ref|ZP_16580656.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA2]
gi|422508894|ref|ZP_16585052.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL046PA2]
gi|422513886|ref|ZP_16590007.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA2]
gi|422534841|ref|ZP_16610764.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL072PA1]
gi|422551407|ref|ZP_16627200.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA3]
gi|422555148|ref|ZP_16630918.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA2]
gi|422567239|ref|ZP_16642865.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA2]
gi|289159400|gb|EFD07591.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes J165]
gi|313806852|gb|EFS45350.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA2]
gi|313817639|gb|EFS55353.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL046PA2]
gi|313821536|gb|EFS59250.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA1]
gi|313824520|gb|EFS62234.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA2]
gi|313826189|gb|EFS63903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL063PA1]
gi|314926337|gb|EFS90168.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL036PA3]
gi|314961659|gb|EFT05760.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA2]
gi|314980261|gb|EFT24355.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL072PA2]
gi|314987116|gb|EFT31208.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA2]
gi|314990682|gb|EFT34773.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA3]
gi|315083075|gb|EFT55051.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL027PA2]
gi|315086609|gb|EFT58585.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA3]
gi|315088011|gb|EFT59987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL072PA1]
gi|327333669|gb|EGE75386.1| membrane protein OxaA [Propionibacterium acnes HL096PA3]
gi|327444473|gb|EGE91127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL013PA2]
gi|328757980|gb|EGF71596.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL020PA1]
gi|332676743|gb|AEE73559.1| membrane protein OxaA [Propionibacterium acnes 266]
Length = 359
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L V+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDGVS-RGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Sphaerochaeta globus str. Buddy]
gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Sphaerochaeta globus str. Buddy]
Length = 604
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 43/228 (18%)
Query: 75 ADAAVSLDSASG--GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYG 132
D + D++S G A+ + A + W G++ ++ +L +L I +YG
Sbjct: 329 GDMTIYDDASSNSFGVANLQLEQALD-SSSWLGWLETILKTILNLLYKVIP------NYG 381
Query: 133 FAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQA 192
II+LT ++K+ +P++KK +EST M +L PK+ I+++Y N + E + LY++
Sbjct: 382 VGIIILTFLLKLVLYPISKKGMESTAKMSSLSPKMAEIKEKYPDNPTKQNEEMATLYKKE 441
Query: 193 GVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---------WIPSLSGPTTIA 243
+NP+ GCLP L P+ I Y GLL + F WIP LS P T+
Sbjct: 442 KINPMGGCLPMLLQFPILIAFY---------GLLNKHFELRGAMFIPGWIPDLSMPDTVF 492
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK 291
+ LPF+ L LP++ VS SM++ +
Sbjct: 493 T------FGFNLPFLGNQLHL----------LPIVYTVSMIYSMKITQ 524
>gi|417839558|ref|ZP_12485734.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19107]
gi|417840422|ref|ZP_12486557.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19107]
gi|341948482|gb|EGT75111.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19107]
gi|341952305|gb|EGT78836.1| Inner membrane protein oxaA [Haemophilus haemolyticus M19107]
Length = 543
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 329 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 383 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 442
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 443 E--LRHAPFFGWIQDLSA 458
>gi|414175555|ref|ZP_11429959.1| inner membrane protein oxaA [Afipia broomeae ATCC 49717]
gi|410889384|gb|EKS37187.1| inner membrane protein oxaA [Afipia broomeae ATCC 49717]
Length = 610
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M + + H+ ++G AI+ +TV+VK+ FPL K S M+
Sbjct: 361 GWFYFITKPMFWAIDWF------FHIFGNFGVAILAVTVLVKLIFFPLANKSYASMAKMK 414
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A++ +Y ++ + Q E +Y++ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 415 AVQPQLAALKDKYPDDKMKQQQEMMEIYKKEKINPIAGCLPILIQIPVFFSLYKVLF-VT 473
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 474 IEMRHAPFFGWIKDLSAP 491
>gi|373466594|ref|ZP_09557908.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Haemophilus sp. oral taxon 851 str. F0397]
gi|371760376|gb|EHO49065.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Haemophilus sp. oral taxon 851 str. F0397]
Length = 542
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|342903754|ref|ZP_08725560.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21621]
gi|341954581|gb|EGT81057.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21621]
Length = 542
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC
[Photobacterium angustum S14]
gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio
angustum S14]
Length = 230
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L + GI ++G AII+LT+IV+ +PLTK Q S M+
Sbjct: 14 GWSSFIASPLHELLAFI-HGIVG-----NWGVAIIILTLIVRGLMYPLTKAQYTSMAKMR 67
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKI+A+++R +++R E LY++ VNPL GCLP L +P++I LY L N++
Sbjct: 68 MLQPKIQAMRERCGDDRQRQSQEMMELYKKEKVNPLGGCLPLLIQMPIFIALYTVL-NLS 126
Query: 222 NEGLLTEGFFWIPSLSG 238
E F WI +LS
Sbjct: 127 TELRNAPFFGWIQNLSA 143
>gi|410085816|ref|ZP_11282531.1| Inner membrane protein translocase component YidC, long form
[Morganella morganii SC01]
gi|409767761|gb|EKN51835.1| Inner membrane protein translocase component YidC, long form
[Morganella morganii SC01]
Length = 480
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK + I ++GF+II++T IV+ +PLT+ Q S M+
Sbjct: 265 GWLWFISQPLFKLLKFIHSFIG------NWGFSIIVITFIVRGIMYPLTRAQYTSMAKMR 318
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+KA+++R +++R+ E LY++ VNPL GCLP + +P+++ LY L
Sbjct: 319 MLQPKLKAMRERIGDDKQRMSQEMMALYKEEKVNPLGGCLPLIIQMPIFLALYYML 374
>gi|455737649|ref|YP_007503915.1| Inner membrane protein translocase component YidC, long form
[Morganella morganii subsp. morganii KT]
gi|455419212|gb|AGG29542.1| Inner membrane protein translocase component YidC, long form
[Morganella morganii subsp. morganii KT]
Length = 540
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK + I ++GF+II++T IV+ +PLT+ Q S M+
Sbjct: 325 GWLWFISQPLFKLLKFIHSFIG------NWGFSIIVITFIVRGIMYPLTRAQYTSMAKMR 378
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+KA+++R +++R+ E LY++ VNPL GCLP + +P+++ LY L
Sbjct: 379 MLQPKLKAMRERIGDDKQRMSQEMMALYKEEKVNPLGGCLPLIIQMPIFLALYYML 434
>gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 514
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSY----GFAIILLTVIVKVATFPLTKKQVEST 157
G+FG + + + +L H Y+Y G AII+LTV++++ FPL K +++
Sbjct: 310 GFFGILGKPLFLLL----------HFFYTYIPNWGVAIIILTVLIRILFFPLNHKSLKAM 359
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M +L P+I+ ++++YA + +++Q E +LY +AG NP++GCLP L IPV+I LY L
Sbjct: 360 RKMADLAPEIEKLKKKYAKDPQKLQEEIMKLYAEAGANPMSGCLPILVQIPVFIALYNVL 419
>gi|337286004|ref|YP_004625477.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfatator
indicus DSM 15286]
gi|335358832|gb|AEH44513.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfatator
indicus DSM 15286]
Length = 536
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 26/197 (13%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
FGF + +L LK H +YG +IILLTV++++ +PL +++ M++L
Sbjct: 315 FGFFDPIAKPLLYALKFFYKYTH---NYGISIILLTVLIRIIFWPLNHISMKNMKKMKDL 371
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QP I ++++Y ++E++ E R+Y+ VNP GCLP + IPV+ LY+ L +A E
Sbjct: 372 QPIIARLKEKYGDDKEKLNQELMRIYKTYKVNPFMGCLPMIIQIPVFFSLYKVLL-MAIE 430
Query: 224 GLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQ 283
F WI LS P + GI +P++ G P VL +L+ +S
Sbjct: 431 LRHAPFFAWIKDLSSPDRLPV-----GID--IPYLGGIP-----------VLTILMGISM 472
Query: 284 YASMEL----MKPPQAR 296
Y +L M P Q +
Sbjct: 473 YFQQKLTPTSMDPTQEK 489
>gi|419420233|ref|ZP_13960462.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes PRP-38]
gi|422394655|ref|ZP_16474696.1| membrane protein OxaA [Propionibacterium acnes HL097PA1]
gi|327334553|gb|EGE76264.1| membrane protein OxaA [Propionibacterium acnes HL097PA1]
gi|379978607|gb|EIA11931.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes PRP-38]
Length = 359
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|421263912|ref|ZP_15714924.1| membrane protein insertase [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401688923|gb|EJS84454.1| membrane protein insertase [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 541
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + ++GFAII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQSIVQ------NWGFAIIGVTLVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 MLQPKLQEMRERFGEDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|209693637|ref|YP_002261565.1| protein translocase component YidC [Aliivibrio salmonicida LFI1238]
gi|254772743|sp|B6EP40.1|YIDC_ALISL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|208007588|emb|CAQ77688.1| inner membrane protein [Aliivibrio salmonicida LFI1238]
Length = 541
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI+ + +L ++ + ++G AI++LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIASPLHKLLSFIQSIVG------NWGLAIMILTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL +
Sbjct: 383 MLQPKLAAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWAL--ME 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
+ L FF WI LS
Sbjct: 441 SVELRHAPFFGWITDLSA 458
>gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC
[Streptomyces avermitilis MA-4680]
gi|34098400|sp|P59811.1|YIDC_STRAW RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces
avermitilis MA-4680]
Length = 428
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 64/93 (68%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
Y+++G NPL+ CLP LA P + LY L+ +A
Sbjct: 96 YKESGTNPLSSCLPILAQSPFFFALYHVLNGIA 128
>gi|354605923|ref|ZP_09023896.1| hypothetical protein HMPREF1003_00463 [Propionibacterium sp.
5_U_42AFAA]
gi|353558061|gb|EHC27427.1| hypothetical protein HMPREF1003_00463 [Propionibacterium sp.
5_U_42AFAA]
Length = 359
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMKSLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|421493127|ref|ZP_15940485.1| hypothetical protein MU9_1655 [Morganella morganii subsp. morganii
KT]
gi|400192755|gb|EJO25893.1| hypothetical protein MU9_1655 [Morganella morganii subsp. morganii
KT]
Length = 529
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK + I ++GF+II++T IV+ +PLT+ Q S M+
Sbjct: 314 GWLWFISQPLFKLLKFIHSFIG------NWGFSIIVITFIVRGIMYPLTRAQYTSMAKMR 367
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPK+KA+++R +++R+ E LY++ VNPL GCLP + +P+++ LY L
Sbjct: 368 MLQPKLKAMRERIGDDKQRMSQEMMALYKEEKVNPLGGCLPLIIQMPIFLALYYML 423
>gi|227878344|ref|ZP_03996301.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01]
gi|227862080|gb|EEJ69642.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 25/166 (15%)
Query: 87 GAASTSADGA----TQKNGGWFG-----FISEAMEFVLKILKDGIDAVHVPYSYGFAIIL 137
G A+T A+G + +G W+ ++S + ++ K++ + SYG+AII+
Sbjct: 33 GCATTGANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGN---------SYGWAIIV 83
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQLETSRLYRQAG 193
TVIV+V PL + ST MQ++QP+I ++++Y G +Q ET++LY++AG
Sbjct: 84 FTVIVRVILVPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAG 143
Query: 194 VNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
VNP GCLP L +PV LY A+ + L T F W+ LS P
Sbjct: 144 VNPYTGCLPVLIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 186
>gi|385230727|ref|YP_005790643.1| membrane protein insertase [Helicobacter pylori Puno135]
gi|344337165|gb|AEN19126.1| membrane protein insertase [Helicobacter pylori Puno135]
Length = 545
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV++ +PL+ K + S ++ + P++K +Q++Y G +++Q +LY
Sbjct: 349 NWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPRMKELQEKYKGEPQKLQAHMMQLY 408
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 409 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 467
Query: 248 GSGISW 253
G+ + W
Sbjct: 468 GASMYW 473
>gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC
[Helicobacter canadensis MIT 98-5491]
gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC
[Helicobacter canadensis MIT 98-5491]
gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 536
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 31/160 (19%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AIILLT+IV+V +PLT K + S ++ L PK+K IQQ+Y G +++Q+ LY
Sbjct: 336 NWGWAIILLTLIVRVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYKGEPQKLQVHMMELY 395
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NP+ GCLP L +PV+ +Y+ L N
Sbjct: 396 KKHGANPMGGCLPLLLQMPVFFAIYRVLYNAI-------------------------ELK 430
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMEL 289
G +WLL D L D Y VLP+L+ ++ Y L
Sbjct: 431 GAAWLLWIQD----LSVMD--PYFVLPILMGITMYLQQHL 464
>gi|256843834|ref|ZP_05549321.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN]
gi|256849611|ref|ZP_05555043.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US]
gi|262046279|ref|ZP_06019242.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US]
gi|295693884|ref|YP_003602494.1| stage iii sporulation protein j [Lactobacillus crispatus ST1]
gi|312984010|ref|ZP_07791358.1| membrane protein OxaA [Lactobacillus crispatus CTV-05]
gi|256613739|gb|EEU18941.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN]
gi|256713727|gb|EEU28716.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US]
gi|260573609|gb|EEX30166.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US]
gi|295031990|emb|CBL51469.1| Stage III sporulation protein J [Lactobacillus crispatus ST1]
gi|310894512|gb|EFQ43586.1| membrane protein OxaA [Lactobacillus crispatus CTV-05]
Length = 291
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 25/166 (15%)
Query: 87 GAASTSADGA----TQKNGGWFG-----FISEAMEFVLKILKDGIDAVHVPYSYGFAIIL 137
G A+T A+G + +G W+ ++S + ++ K++ + SYG+AII+
Sbjct: 28 GCATTGANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGN---------SYGWAIIV 78
Query: 138 LTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQLETSRLYRQAG 193
TVIV+V PL + ST MQ++QP+I ++++Y G +Q ET++LY++AG
Sbjct: 79 FTVIVRVILVPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAG 138
Query: 194 VNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
VNP GCLP L +PV LY A+ + L T F W+ LS P
Sbjct: 139 VNPYTGCLPVLIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 181
>gi|50843790|ref|YP_057017.1| inner membrane protein translocase component YidC
[Propionibacterium acnes KPA171202]
gi|289424430|ref|ZP_06426213.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes SK187]
gi|295131878|ref|YP_003582541.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes SK137]
gi|335050858|ref|ZP_08543805.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp.
409-HC1]
gi|335054652|ref|ZP_08547457.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp.
434-HC2]
gi|342211422|ref|ZP_08704147.1| 60Kd inner membrane protein [Propionibacterium sp. CC003-HC2]
gi|365963972|ref|YP_004945538.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365966236|ref|YP_004947801.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365975152|ref|YP_004956711.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn33]
gi|387504709|ref|YP_005945938.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes 6609]
gi|407936725|ref|YP_006852367.1| inner membrane protein translocase component YidC
[Propionibacterium acnes C1]
gi|417930664|ref|ZP_12574039.1| 60Kd inner membrane protein [Propionibacterium acnes SK182]
gi|422386777|ref|ZP_16466894.1| membrane protein OxaA [Propionibacterium acnes HL096PA2]
gi|422393944|ref|ZP_16473991.1| membrane protein OxaA [Propionibacterium acnes HL099PA1]
gi|422423958|ref|ZP_16500909.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL043PA1]
gi|422426727|ref|ZP_16503645.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA1]
gi|422432362|ref|ZP_16509232.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL059PA2]
gi|422434606|ref|ZP_16511464.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL083PA2]
gi|422437140|ref|ZP_16513987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL092PA1]
gi|422442336|ref|ZP_16519139.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA1]
gi|422446120|ref|ZP_16522865.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL027PA1]
gi|422450542|ref|ZP_16527259.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL030PA2]
gi|422452770|ref|ZP_16529466.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA3]
gi|422455497|ref|ZP_16532167.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL030PA1]
gi|422460958|ref|ZP_16537592.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL038PA1]
gi|422475655|ref|ZP_16552100.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL056PA1]
gi|422476224|ref|ZP_16552663.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL007PA1]
gi|422485028|ref|ZP_16561395.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL043PA2]
gi|422492229|ref|ZP_16568537.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL086PA1]
gi|422494662|ref|ZP_16570957.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL025PA1]
gi|422499918|ref|ZP_16576174.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL063PA2]
gi|422511053|ref|ZP_16587196.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL059PA1]
gi|422514814|ref|ZP_16590932.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA2]
gi|422519753|ref|ZP_16595799.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL074PA1]
gi|422520279|ref|ZP_16596321.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL045PA1]
gi|422523245|ref|ZP_16599257.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL053PA2]
gi|422525358|ref|ZP_16601360.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL083PA1]
gi|422527806|ref|ZP_16603793.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL053PA1]
gi|422531808|ref|ZP_16607756.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA1]
gi|422536349|ref|ZP_16612257.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL078PA1]
gi|422541612|ref|ZP_16617470.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA1]
gi|422544156|ref|ZP_16619996.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL082PA1]
gi|422546033|ref|ZP_16621860.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA3]
gi|422550446|ref|ZP_16626243.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA1]
gi|422556798|ref|ZP_16632545.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL025PA2]
gi|422559568|ref|ZP_16635296.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA1]
gi|422562024|ref|ZP_16637702.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL046PA1]
gi|422570988|ref|ZP_16646583.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL067PA1]
gi|422577772|ref|ZP_16653301.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA4]
gi|50841392|gb|AAT84059.1| conserved membrane protein [Propionibacterium acnes KPA171202]
gi|289155127|gb|EFD03809.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes SK187]
gi|291377350|gb|ADE01205.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes SK137]
gi|313771070|gb|EFS37036.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL074PA1]
gi|313792572|gb|EFS40658.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA1]
gi|313803573|gb|EFS44755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA2]
gi|313811765|gb|EFS49479.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL083PA1]
gi|313814225|gb|EFS51939.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL025PA1]
gi|313815413|gb|EFS53127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL059PA1]
gi|313829185|gb|EFS66899.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL063PA2]
gi|313832299|gb|EFS70013.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL007PA1]
gi|313832759|gb|EFS70473.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL056PA1]
gi|313839618|gb|EFS77332.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL086PA1]
gi|314916209|gb|EFS80040.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA4]
gi|314917476|gb|EFS81307.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA1]
gi|314921812|gb|EFS85643.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA3]
gi|314930923|gb|EFS94754.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL067PA1]
gi|314955281|gb|EFS99686.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL027PA1]
gi|314959154|gb|EFT03256.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL002PA1]
gi|314963877|gb|EFT07977.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL082PA1]
gi|314969087|gb|EFT13185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL037PA1]
gi|314975194|gb|EFT19289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL053PA1]
gi|314977606|gb|EFT21701.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL045PA1]
gi|314985207|gb|EFT29299.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL005PA1]
gi|315078989|gb|EFT51001.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL053PA2]
gi|315081501|gb|EFT53477.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL078PA1]
gi|315097166|gb|EFT69142.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL038PA1]
gi|315099346|gb|EFT71322.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL059PA2]
gi|315102313|gb|EFT74289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL046PA1]
gi|315107502|gb|EFT79478.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL030PA1]
gi|315109870|gb|EFT81846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL030PA2]
gi|327332496|gb|EGE74231.1| membrane protein OxaA [Propionibacterium acnes HL096PA2]
gi|327446727|gb|EGE93381.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL043PA2]
gi|327448831|gb|EGE95485.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL043PA1]
gi|327454248|gb|EGF00903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA3]
gi|327456308|gb|EGF02963.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL083PA2]
gi|327457418|gb|EGF04073.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL092PA1]
gi|328756006|gb|EGF69622.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL087PA1]
gi|328758849|gb|EGF72465.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL025PA2]
gi|328759807|gb|EGF73398.1| membrane protein OxaA [Propionibacterium acnes HL099PA1]
gi|333763989|gb|EGL41403.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp.
434-HC2]
gi|333768631|gb|EGL45805.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp.
409-HC1]
gi|335278754|gb|AEH30659.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes 6609]
gi|340766966|gb|EGR89491.1| 60Kd inner membrane protein [Propionibacterium sp. CC003-HC2]
gi|340770048|gb|EGR92565.1| 60Kd inner membrane protein [Propionibacterium acnes SK182]
gi|365740653|gb|AEW84855.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365742917|gb|AEW82611.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365745151|gb|AEW80348.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes TypeIA2 P.acn33]
gi|407905306|gb|AFU42136.1| inner membrane protein translocase component YidC
[Propionibacterium acnes C1]
gi|456738335|gb|EMF62969.1| inner membrane protein translocase component YidC
[Propionibacterium acnes FZ1/2/0]
Length = 359
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|373494055|ref|ZP_09584661.1| hypothetical protein HMPREF0380_00299 [Eubacterium infirmum F0142]
gi|371969189|gb|EHO86640.1| hypothetical protein HMPREF0380_00299 [Eubacterium infirmum F0142]
Length = 233
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 18/137 (13%)
Query: 131 YGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYR 190
Y AI++L+V+++VA +PL KKQ+ ST M ++QPK+ I+++YA ++E + + + LY+
Sbjct: 25 YWLAIVILSVLIRVAMYPLYKKQILSTSGMADMQPKMNEIKKKYANDKEMMNQKIAELYK 84
Query: 191 QAGVNPLAGCLPTLATIPVWIGLY----QALSNVANEGLLT---EGFFWIPSLSGPTTIA 243
++G NP AGC+P L + V GL+ L+ + +E ++ E F WI L P
Sbjct: 85 ESGFNPSAGCMPMLVQLIVISGLFVLLRYPLNYINDENMVFAVHESFLWIKDLCQPD--- 141
Query: 244 ARQSGSGISWLLPFVDG 260
W+LP + G
Sbjct: 142 --------PWILPILSG 150
>gi|422457758|ref|ZP_16534416.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA2]
gi|315105159|gb|EFT77135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL050PA2]
Length = 359
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|282853036|ref|ZP_06262373.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes J139]
gi|386070537|ref|YP_005985433.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes ATCC 11828]
gi|422389407|ref|ZP_16469504.1| membrane protein OxaA [Propionibacterium acnes HL103PA1]
gi|422463430|ref|ZP_16540043.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL060PA1]
gi|422466573|ref|ZP_16543135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA4]
gi|422468299|ref|ZP_16544830.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA3]
gi|422565747|ref|ZP_16641386.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL082PA2]
gi|422576525|ref|ZP_16652062.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL001PA1]
gi|282582489|gb|EFB87869.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes J139]
gi|314922673|gb|EFS86504.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL001PA1]
gi|314965757|gb|EFT09856.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL082PA2]
gi|314982899|gb|EFT26991.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA3]
gi|315091205|gb|EFT63181.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL110PA4]
gi|315094439|gb|EFT66415.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL060PA1]
gi|327328934|gb|EGE70694.1| membrane protein OxaA [Propionibacterium acnes HL103PA1]
gi|353454903|gb|AER05422.1| putative inner membrane protein translocase component YidC
[Propionibacterium acnes ATCC 11828]
Length = 359
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R+ GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 REEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|300725384|ref|YP_003714723.1| preprotein translocase [Xenorhabdus nematophila ATCC 19061]
gi|297631940|emb|CBJ92665.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
translocon, membrane component [Xenorhabdus nematophila
ATCC 19061]
Length = 544
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L + I ++GF+II +T IV+ +PLTK Q S M+
Sbjct: 323 GWLWFISQPLFKLLKFLHEYIG------NWGFSIIAITFIVRGIMYPLTKAQYTSMAKMR 376
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI A+++R+ +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 377 LLQPKITAMRERFGDDRQRMSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYML 432
>gi|407894396|ref|ZP_11153426.1| cytoplasmic insertase into membrane protein, Sec system
[Diplorickettsia massiliensis 20B]
Length = 529
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 37/192 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G FIS A+ ++LK + + ++G+AI++LTV++K+A + L+ K S AM+
Sbjct: 316 GILWFISMALFWLLKQIYQIVG------NWGWAIVILTVLIKLAFYHLSAKSYRSMAAMR 369
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP++ A++ RY +++++ ET LY+ VNPL GCLP L IPV+I LY +
Sbjct: 370 NLQPRLAALKARYGDDRQKLTQETMALYKAEKVNPLGGCLPILVQIPVFIALYWMILE-- 427
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
++ RQ+ PF+ L D+ Y +LP+L+ V
Sbjct: 428 -------------------SVELRQA--------PFILWIRDLSVKDS--YYILPILMGV 458
Query: 282 SQYASMELMKPP 293
+ + +L PP
Sbjct: 459 TMFIQQKLNPPP 470
>gi|400406296|ref|YP_006589044.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [secondary endosymbiont of Heteropsylla cubana]
gi|400364549|gb|AFP85616.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [secondary endosymbiont of Heteropsylla cubana]
Length = 542
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK++ + I ++G +II++T IV+ +PLTK Q S M+
Sbjct: 332 GWLWFISQPLFNLLKLINNFIG------NWGVSIIIITFIVRGIMYPLTKAQYVSIAKMR 385
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R++ ++ R E LY+ VNPL GCLP L +P+++ LY LS+V
Sbjct: 386 MLQPKLETLRKRFSSDKHRQNQEIMALYKTEKVNPLGGCLPVLIQMPIFLALYYMLSSVV 445
>gi|417842580|ref|ZP_12488662.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21127]
gi|341951418|gb|EGT77990.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21127]
Length = 542
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 328 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGVAIICVTIVVKAILYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 382 MLQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAV 441
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 442 E--LRHAPFFGWIQDLSA 457
>gi|357633427|ref|ZP_09131305.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
FW1012B]
gi|357581981|gb|EHJ47314.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
FW1012B]
Length = 530
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ + LK+L D V +YG AIILLTV++K +PL+ K +S M+
Sbjct: 318 GWFDFIAKPL---LKLLHFFYDYVG---NYGVAIILLTVLIKGLFWPLSHKSYKSMEQMK 371
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQP + +++++ +++++ E +LY+ VNP GCLP + IPV+ GLYQAL
Sbjct: 372 RLQPLLTQLREKHKDDRQKMNEEMMQLYKTYKVNPAGGCLPMIVQIPVFFGLYQAL 427
>gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Succinatimonas hippei YIT 12066]
gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Succinatimonas hippei YIT 12066]
Length = 548
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS + +L+ + I ++GF+II+LT++V+ FPLTK Q S M+
Sbjct: 330 GWLWFISIPLFKILEFIHSYIG------NWGFSIIVLTLVVRSVLFPLTKAQYTSMAKMR 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
L PK++ +++RY +++++ ET RLY+ VNPL GC P L +P++I LY L
Sbjct: 384 LLTPKMQELRERYKDDRQKLGQETMRLYKTEKVNPLGGCFPLLIQMPIFIALYWTL 439
>gi|397671774|ref|YP_006513309.1| 60Kd inner membrane protein [Propionibacterium propionicum F0230a]
gi|395142273|gb|AFN46380.1| 60Kd inner membrane protein [Propionibacterium propionicum F0230a]
Length = 364
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AII LT++V+ PL KQ+ S+ AMQ LQP+I+ +Q+++ ++ER+ E +LY
Sbjct: 51 SWTLAIITLTLVVRTLMIPLFVKQINSSRAMQMLQPRIQELQKKHGADRERVAREMQKLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW------IPSLSGPTTIA 243
+ GVNP+A C P L +PV+ L++ L VA+ + G+++ + SL G
Sbjct: 111 AEEGVNPMASCFPLLLQMPVFWALFRVLQGVADNQI--RGYWFQTSPDLVASLQGADLFG 168
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
A+ +G + P +D P G +++ +L++ ++LM+ PP+A
Sbjct: 169 AKLAGR----IFP-ID---PFGATQILGIVLIALLVITLFLTQLQLMRKNMPPEA 215
>gi|427412759|ref|ZP_18902951.1| YidC/Oxa1 family membrane protein insertase [Veillonella ratti
ACS-216-V-Col6b]
gi|425715575|gb|EKU78561.1| YidC/Oxa1 family membrane protein insertase [Veillonella ratti
ACS-216-V-Col6b]
Length = 215
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 2/133 (1%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNL 163
F + + M +L + +A+ P SYG AII++T+ +K PLT KQV+S MQ L
Sbjct: 4 FQVLVDFMRTLLTYCYNFTEALGFP-SYGIAIIIMTIGIKAILAPLTAKQVKSMKGMQKL 62
Query: 164 QPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE 223
QPK+K IQ +Y + +R Q E +++Y++ GVNPL+GCLP L +P I ++ AL +
Sbjct: 63 QPKMKEIQNKYKNDPQRAQQEIAKMYKELGVNPLSGCLPLLVQMPFLIAIFYALQGYPYD 122
Query: 224 GLLTEGFFWIPSL 236
E F W+PSL
Sbjct: 123 P-AHESFLWLPSL 134
>gi|336120986|ref|YP_004575773.1| hypothetical protein MLP_53560 [Microlunatus phosphovorus NM-1]
gi|334688785|dbj|BAK38370.1| putative membrane protein [Microlunatus phosphovorus NM-1]
Length = 350
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 66/94 (70%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++ +II LTV++++A PL KQ++S+ MQ LQPK + +Q++Y ++E++ ET +L
Sbjct: 52 WTWALSIICLTVVIRIALIPLFVKQIKSSRQMQLLQPKARELQKKYGHDREKLGQETMKL 111
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
YR+ NPLA CLP L +P+++ L++ L VA+
Sbjct: 112 YREHNANPLASCLPLLLQMPIFLALFRVLDGVAH 145
>gi|407780969|ref|ZP_11128189.1| Inner membrane insertion protein [Oceanibaculum indicum P24]
gi|407208395|gb|EKE78313.1| Inner membrane insertion protein [Oceanibaculum indicum P24]
Length = 616
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + + + L H ++G AI+ LTV++K+ FPL K ++ ++
Sbjct: 354 GWFYFLTKPIFYAIDWL------YHFLGNFGLAILALTVVIKLLFFPLANKSYKAMSKLK 407
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ +++R +++R+ E LY++ VNP AGCLP L IPV+ LY+ L V
Sbjct: 408 ELQPKMMELRERIGDDRQRLNQEMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLF-VT 466
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E + WI LS PTTI
Sbjct: 467 IEMRHAPFYGWIKDLSAPDPTTI 489
>gi|217966559|ref|YP_002352065.1| hypothetical protein Dtur_0119 [Dictyoglomus turgidum DSM 6724]
gi|217335658|gb|ACK41451.1| 60 kDa inner membrane insertion protein [Dictyoglomus turgidum DSM
6724]
Length = 209
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AII L ++V++ +PLT Q++S Q +QP+IK IQ+++ + + + + LY
Sbjct: 22 NYGLAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQEKFKDDPQEMNKQIMLLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
+Q +NP+ GCLP L P+ I LYQ L + +T F WI L+ P I
Sbjct: 82 QQYKINPMMGCLPLLIQFPILIALYQLLLHYKYA--VTPQFLWISDLTKPDYI 132
>gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris BisA53]
gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris
BisA53]
Length = 626
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 24/198 (12%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L H+ ++G +I+ +TVI+K+ PL K S M+
Sbjct: 377 GWFYFITKPMFVALDFF------YHLVGNFGLSILFVTVIIKLLFLPLANKSYASMAKMK 430
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+++A++ R+ ++ + Q E +YR+ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 431 AIQPQLQALKDRHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VT 489
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGH-PPLGWHDTAAYLVL--- 275
E + WI LS PT I + L+P+ P LG+ YLVL
Sbjct: 490 IEMRHAPFYGWIHDLSAADPTNI------FNLFGLIPYDPTQIPVLGY-----YLVLGIW 538
Query: 276 PVLLVVSQYASMELMKPP 293
P+++ ++ + M+L P
Sbjct: 539 PIIMGITMWVQMKLNPAP 556
>gi|423720143|ref|ZP_17694325.1| membrane protein insertase, yidC/oxa1 family [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366905|gb|EID44190.1| membrane protein insertase, yidC/oxa1 family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 251
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++T+AMQ L+P+++ +Q++Y G Q ++Q E
Sbjct: 54 NYGVAIIVLTLIVRFCLLPLMIKQFKTTIAMQKLRPELQKLQEKYKGTDLEAQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L P+++ LY A+ + + + F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQTPIFMALYYAI--LRTQEIKLHSFLWV 159
>gi|299068432|emb|CBJ39656.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum CMR15]
Length = 553
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 47/200 (23%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVEST 157
K+ GW +++ + ++L + +H ++G++I+ LTV++K+ FPL+ S
Sbjct: 337 KDYGWLTIVAKPLFWLL-------EKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSM 389
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M++LQP++ AI++R+ G+ +++ E LYR VNPL GCLP + IPV++ LY AL
Sbjct: 390 AKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYRTEKVNPLGGCLPIMIQIPVFMALYWAL 449
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YL 273
+++ R G P LGW HD A+ +
Sbjct: 450 L---------------------SSVEMR--------------GAPWLGWVHDLASPDPFY 474
Query: 274 VLPVLLVVSQYASMELMKPP 293
+LP+L+ VS + L P
Sbjct: 475 ILPILMAVSMFVQTRLNPTP 494
>gi|406929011|gb|EKD64701.1| hypothetical protein ACD_50C00322G0009, partial [uncultured
bacterium]
Length = 257
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 63/96 (65%)
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
+H+PY++GF+IILLTV +++ +PL Q++S MQ + P + ++++Y +++R Q
Sbjct: 26 TLHIPYAFGFSIILLTVFIRILLYPLISAQIKSAHDMQKIAPHLSRVKEKYKDDKKRQQE 85
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
E +LY++ VNP AGCLP + +P+ LY L+
Sbjct: 86 EMMKLYKEHSVNPAAGCLPLIIQLPIIWSLYNVLTK 121
>gi|312111144|ref|YP_003989460.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
Y4.1MC1]
gi|336235592|ref|YP_004588208.1| YidC/Oxa1 family membrane protein insertase [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216245|gb|ADP74849.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
Y4.1MC1]
gi|335362447|gb|AEH48127.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus
thermoglucosidasius C56-YS93]
Length = 251
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ ++T+AMQ L+P+++ +Q++Y G Q ++Q E
Sbjct: 54 NYGVAIIVLTLIVRFCLLPLMIKQFKTTIAMQKLRPELQKLQEKYKGTDLEAQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP +GCLP L P+++ LY A+ + + + F W+
Sbjct: 114 MQLYQKHGVNPASGCLPVLIQTPIFMALYYAI--LRTQEIKLHSFLWV 159
>gi|294056003|ref|YP_003549661.1| YidC/Oxa1 family membrane protein insertase [Coraliomargarita
akajimensis DSM 45221]
gi|293615336|gb|ADE55491.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita
akajimensis DSM 45221]
Length = 604
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 95 GATQKNGGWFGFISEAMEFVLKILKDGIDAVH--VPYSYGFAIILLTVIVKVATFPLTKK 152
G Q FGF S F+ K+L + +H VP ++G +I+++T+ +K+ +PLT K
Sbjct: 357 GNYQDKIMQFGFFS----FISKLLLSFMYLIHSLVP-NWGLSIVIMTICIKMIFWPLTAK 411
Query: 153 QVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIG 212
+S M +Q + +++++ N +++Q ET +L+R+ VNPLAGCLP +P+++G
Sbjct: 412 ASKSQKRMAKIQGPMAELKEKFKDNPQKMQQETLKLFREHRVNPLAGCLPLFVQMPIFLG 471
Query: 213 LYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
L+ L + L E F W+ LS P T+
Sbjct: 472 LFYMLRTASE--LRFESFLWVSDLSQPDTM 499
>gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04]
gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04]
Length = 544
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +II LT++V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY
Sbjct: 342 NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLY 401
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAAR 245
++ GVNPL GC P + +P++ LY ++N+ LL F WI LS G +
Sbjct: 402 KEEGVNPLGGCFPVILQLPIFFALYSLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFG 458
Query: 246 QSGSGISW----LLPFVDGHPPLG 265
+SW +LPF+ LG
Sbjct: 459 YKLYFVSWTDIRILPFIMMFTQLG 482
>gi|54307240|ref|YP_128260.1| inner membrane protein translocase component YidC [Photobacterium
profundum SS9]
gi|81697579|sp|Q6LW55.1|YIDC_PHOPR RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|46911660|emb|CAG18458.1| Putative inner membrane protein, 60 kDa [Photobacterium profundum
SS9]
Length = 538
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
+T+A+ + GW FI+ + +L ++ + ++G AI++LT IV+ A +PL
Sbjct: 314 ATAANLNLTVDYGWLWFIASPLHKLLSFIQSIVG------NWGLAIMMLTFIVRGAMYPL 367
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK Q S M+ LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P+
Sbjct: 368 TKAQYTSMAKMRMLQPKLTAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPI 427
Query: 210 WIGLYQALSNVANEGLLTEGFF-WIPSLSG 238
+I LY +L + + L FF WI LS
Sbjct: 428 FIALYWSL--MESVELRHSPFFGWIHDLSA 455
>gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC
translocon membrane protein [Xenorhabdus bovienii
SS-2004]
gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
translocon, membrane component [Xenorhabdus bovienii
SS-2004]
Length = 537
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L + I ++GF+II +T IV+ +PLTK Q S M+
Sbjct: 322 GWLWFISQPLFKLLKFLHEFIG------NWGFSIIAITFIVRGIMYPLTKAQYTSMAKMR 375
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI A+++R+ +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 376 LLQPKITAMRERHGDDRQRMSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYML 431
>gi|161508219|ref|YP_001578190.1| stage III sporulation protein [Lactobacillus helveticus DPC 4571]
gi|160349208|gb|ABX27882.1| Stage III sporulation protein [Lactobacillus helveticus DPC 4571]
Length = 291
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADG----ATQKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G A+ SA+G +G W+ ++S + ++ K++ +
Sbjct: 18 ALITLAVVLTGCAAQSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGN------- 70
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ T+I++V PL + ST MQ +QP+I ++++Y G +Q
Sbjct: 71 --SYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQ 128
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ET++LY++AGVNP GCLP L +PV LY A+ + L T F W+ LS P
Sbjct: 129 ETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 181
>gi|50123363|ref|YP_052530.1| inner membrane protein translocase component YidC [Pectobacterium
atrosepticum SCRI1043]
gi|81693013|sp|Q6CYR0.1|YIDC_ERWCT RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|49613889|emb|CAG77341.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 544
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 27 GLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASG 86
G + +L + + + F+ P I++ S +LN+ + +A A LD
Sbjct: 268 GANTFYTSKLGNGQAAIGFKAAPVIIAAGSQQNLNATLWVGPEIQDKMAAVAPHLDLTV- 326
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVAT 146
+ GW FIS+ + +LK L I ++GF+II +T IV+
Sbjct: 327 -------------DYGWLWFISQPLFKLLKFLHGFIG------NWGFSIIAITFIVRGVM 367
Query: 147 FPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLAT 206
+PLTK Q S M+ LQPK++A+++R +++R+ E LY+ VNPL GCLP +
Sbjct: 368 YPLTKAQYTSMAKMRLLQPKLQAMRERIGDDKQRMSQEMMALYKSEKVNPLGGCLPLVIQ 427
Query: 207 IPVWIGLYQAL 217
+P+++ LY L
Sbjct: 428 MPIFLALYYML 438
>gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074]
gi|421740550|ref|ZP_16178800.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Streptomyces sp. SM8]
gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074]
gi|406691075|gb|EKC94846.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Streptomyces sp. SM8]
Length = 431
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE---GLLTEGFF 231
Y+ AG NPLA CLP L P + LY L+++A+ G + E
Sbjct: 96 YKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFIDEALL 141
>gi|292490140|ref|YP_003533035.1| hypothetical protein EAMY_3682 [Erwinia amylovora CFBP1430]
gi|292901144|ref|YP_003540513.1| hypothetical protein EAM_3457 [Erwinia amylovora ATCC 49946]
gi|428787129|ref|ZP_19004605.1| Inner membrane protein yidC [Erwinia amylovora ACW56400]
gi|291200992|emb|CBJ48131.1| inner membrane protein [Erwinia amylovora ATCC 49946]
gi|291555582|emb|CBA24181.1| Inner membrane protein yidC [Erwinia amylovora CFBP1430]
gi|312174333|emb|CBX82586.1| Inner membrane protein yidC [Erwinia amylovora ATCC BAA-2158]
gi|426274596|gb|EKV52338.1| Inner membrane protein yidC [Erwinia amylovora ACW56400]
Length = 548
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFLHGFIG------NWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI+A+++R +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 385 MLQPKIQAMRERLGDDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYML 440
>gi|384172914|ref|YP_005554291.1| putative inner membrane protein translocase component [Arcobacter
sp. L]
gi|345472524|dbj|BAK73974.1| putative inner membrane protein translocase component [Arcobacter
sp. L]
Length = 524
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M +L+ ++ I ++G+ I++LT+++K+ +PL+ K + S ++
Sbjct: 312 GWFTFIAKPMFLLLQFIQGYIG------NWGWTIVILTILIKLVLYPLSYKGMVSMQKLK 365
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
+L PK+K IQ RY ++++ + LY++ G NP+ GCLP + IPV+ +Y+ L N
Sbjct: 366 DLAPKMKEIQARYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPVFFAIYRVLLN 423
>gi|259910298|ref|YP_002650654.1| inner membrane protein translocase component YidC [Erwinia
pyrifoliae Ep1/96]
gi|385786607|ref|YP_005817716.1| putative inner membrane protein translocase component YidC [Erwinia
sp. Ejp617]
gi|387873320|ref|YP_005804709.1| inner membrane protein yidC [Erwinia pyrifoliae DSM 12163]
gi|224965920|emb|CAX57453.1| Inner membrane protein OxaA [Erwinia pyrifoliae Ep1/96]
gi|283480422|emb|CAY76338.1| Inner membrane protein yidC [Erwinia pyrifoliae DSM 12163]
gi|310765879|gb|ADP10829.1| putative inner membrane protein translocase component YidC [Erwinia
sp. Ejp617]
Length = 548
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFLHGFIG------NWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI+A+++R +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 385 MLQPKIQAMRERLGDDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYML 440
>gi|357400706|ref|YP_004912631.1| membrane protein OxaA [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386356762|ref|YP_006055008.1| inner membrane protein translocase component YidC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337767115|emb|CCB75826.1| Membrane protein oxaA [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807270|gb|AEW95486.1| putative inner membrane protein translocase component YidC
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 390
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 64/94 (68%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T MQ LQPK+KAIQ+RY +++R E +L
Sbjct: 33 WAWGLSIVSLVIVIRICLIPLFVKQIKATRNMQVLQPKMKAIQERYKHDKQRQSEEMMKL 92
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 222
Y+++G NPL+ CLP L P ++ LY L N+A
Sbjct: 93 YKESGTNPLSSCLPILVQSPFFMSLYGVLHNIAT 126
>gi|296283114|ref|ZP_06861112.1| putative inner membrane protein translocase component YidC
[Citromicrobium bathyomarinum JL354]
Length = 585
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF + + + ++L + V ++G AIILLT IV+ FP+ +K S +M+
Sbjct: 339 GWFRWFEKPILWLL------LQIFSVVGNFGVAIILLTCIVRGLMFPIAQKGFSSMASMK 392
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++K +Q+++ ++ Q E +L+++ GVNP+AGCLP L IPV+ LY+ L +A
Sbjct: 393 AIQPEMKKLQEKHKDDKVTQQQEMQKLFKERGVNPVAGCLPMLLQIPVFFALYKVLI-LA 451
Query: 222 NEGLLTEGFFWIPSLSGP 239
E FWI LS P
Sbjct: 452 IEMRHQPFIFWIRDLSAP 469
>gi|420397661|ref|ZP_14896877.1| inner membrane protein oxaA [Helicobacter pylori CPY1313]
gi|393011206|gb|EJB12394.1| inner membrane protein oxaA [Helicobacter pylori CPY1313]
Length = 546
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ + PK+K +Q++Y G +++Q +LY
Sbjct: 350 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLY 409
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 410 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLSIMDPYFILPLLM 468
Query: 248 GSGISW 253
G+ + W
Sbjct: 469 GASMYW 474
>gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl
5]
gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter
diazotrophicus PAl 5]
Length = 572
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + +VL L + ++G A++ T++VK FPL +Q S M+
Sbjct: 330 GWFAFLTRPIFYVLDWLNTLLG------NFGLALMAFTLLVKALFFPLATRQFRSMAKMR 383
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++RY +Q + LY+ GVNP AGCLP + IPV+ LY+ L +
Sbjct: 384 QLQPKVQELRERYKSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLY-IT 442
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 443 IEMRHAPFFGWIHDLSAP 460
>gi|260101881|ref|ZP_05752118.1| stage III sporulation protein J [Lactobacillus helveticus DSM
20075]
gi|417012036|ref|ZP_11946402.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463]
gi|260084309|gb|EEW68429.1| stage III sporulation protein J [Lactobacillus helveticus DSM
20075]
gi|328463993|gb|EGF35491.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463]
Length = 298
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 25/176 (14%)
Query: 77 AAVSLDSASGGAASTSADG----ATQKNGGWFG-----FISEAMEFVLKILKDGIDAVHV 127
A ++L G A+ SA+G +G W+ ++S + ++ K++ +
Sbjct: 25 ALITLAVVLTGCAAQSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGN------- 77
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQL 183
SYG+AII+ T+I++V PL + ST MQ +QP+I ++++Y G +Q
Sbjct: 78 --SYGWAIIVFTIIIRVILLPLNAISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQ 135
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
ET++LY++AGVNP GCLP L +PV LY A+ + L T F W+ LS P
Sbjct: 136 ETNKLYKEAGVNPYTGCLPVLIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 188
>gi|188535565|ref|YP_001909362.1| protein translocase component YidC [Erwinia tasmaniensis Et1/99]
gi|254772784|sp|B2VCE6.1|YIDC_ERWT9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|188030607|emb|CAO98502.1| Inner membrane protein OxaA [Erwinia tasmaniensis Et1/99]
Length = 548
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFLHGFIG------NWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI+A+++R +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 385 MLQPKIQAMRERLGDDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYML 440
>gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA, partial [Roseomonas cervicalis ATCC
49957]
gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957]
Length = 524
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 71 LYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISE----AMEFVLKILKDGIDAVH 126
L+ A LD+ T D A + GWF F+++ A++++ K+ +
Sbjct: 254 LFAGAKEVHLLDAYRDNLGITDFDKAI--DFGWFYFLTKPFFYALDYLFKLFGN------ 305
Query: 127 VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETS 186
+G AI++ TV +K+A FPL K +S M+ L PK++ I++RY + + Q E
Sbjct: 306 ----FGIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKAQSEMM 361
Query: 187 RLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
LYR VNP +GCLP L IPV+ LY+ L V E F WI LS P
Sbjct: 362 ALYRSEKVNPASGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLSAP 413
>gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 589
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + +VL L + ++G A++ T++VK FPL +Q S M+
Sbjct: 347 GWFAFLTRPIFYVLDWLNTLLG------NFGLALMAFTLLVKALFFPLATRQFRSMAKMR 400
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++RY +Q + LY+ GVNP AGCLP + IPV+ LY+ L +
Sbjct: 401 QLQPKVQELRERYKSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLY-IT 459
Query: 222 NEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 460 IEMRHAPFFGWIHDLSAP 477
>gi|424863814|ref|ZP_18287726.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86A]
gi|400757135|gb|EJP71347.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86A]
Length = 509
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M + + +D ++G I++ T+++K+ +P+T K S AM+
Sbjct: 300 GWFWFLAQPMVLAMDWINGYVD------NWGLTIVIFTILIKLVFWPVTAKSFSSMAAMR 353
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
L P++ I++RY + ++ Q ET +L+++ G NPL GCLP L +P +IG + AL
Sbjct: 354 KLTPELNEIKERYKDDPQKTQAETLKLFKKNGANPLGGCLPVLIQMPFFIGFFFAL 409
>gi|240949810|ref|ZP_04754139.1| putative inner membrane protein translocase component YidC
[Actinobacillus minor NM305]
gi|240295727|gb|EER46422.1| putative inner membrane protein translocase component YidC
[Actinobacillus minor NM305]
Length = 554
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 89 ASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFP 148
A T+A + GW FI++ + ++L ++ + ++G AII +T++VK +P
Sbjct: 327 AETAAHLDLTADYGWAWFIAKPLFWLLTQIQKLV------VNWGLAIICVTIVVKTLLYP 380
Query: 149 LTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIP 208
LTK Q S M+ LQP+I+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P
Sbjct: 381 LTKAQYTSMAKMRMLQPRIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMP 440
Query: 209 VWIGLYQALSNVANEGLLTEGFF-WIPSLSG 238
++I LY L FF WI LS
Sbjct: 441 IFIALYWTFMEAVE--LRHAPFFGWIQDLSA 469
>gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr]
gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr]
Length = 544
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G +II LT++V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY
Sbjct: 342 NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLY 401
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF---WIPSLS-GPTTIAAR 245
++ GVNPL GC P + +P++ LY ++N+ LL F WI LS G +
Sbjct: 402 KEEGVNPLGGCFPIILQLPIFFALYSLVNNLF---LLRGASFIPGWIDDLSIGDSVYHFG 458
Query: 246 QSGSGISW----LLPFVDGHPPLG 265
+SW +LPF+ LG
Sbjct: 459 YKLYFVSWTDIRILPFIMMFTQLG 482
>gi|409123501|ref|ZP_11222896.1| membrane protein insertase [Gillisia sp. CBA3202]
Length = 618
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
SYG AII++T++V++ P+T K S M+ L+P+I + ++Y N + Q ET +LY
Sbjct: 374 SYGIAIIVMTIVVRIVLSPVTYKSYLSQAKMKVLKPEINELNEKYKDNAMKKQQETMKLY 433
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
+AG +P++GCLP L IPV+ L+Q + L +GF W L+ TIA
Sbjct: 434 SKAGASPMSGCLPALMQIPVFYALFQFFPSAFQ--LRQKGFLWADDLASYDTIAE----- 486
Query: 250 GISWLLPFVDGHPPL 264
+ + +PF H L
Sbjct: 487 -LPFHIPFYGDHVSL 500
>gi|386853314|ref|YP_006271327.1| preprotein translocase subunit YidC [Actinoplanes sp. SE50/110]
gi|359840818|gb|AEV89259.1| preprotein translocase subunit YidC [Actinoplanes sp. SE50/110]
Length = 340
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 106 FISEAMEFVLKILKDGIDAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVEST 157
+I A+ ++L DA+ +P +S+ +I L V ++V FP+ KQ++S
Sbjct: 5 WIYYAISWILLRWHSLWDAIGIPDDRVLGTNWSWVLSIFFLVVTLRVILFPVFVKQIKSQ 64
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
AMQ LQPK+KA+Q+++ G++E +Q E LY+ NPL GCLP +PV+IGL+ L
Sbjct: 65 RAMQALQPKVKALQEKHKGDRETLQKEMMELYKTEKANPLMGCLPMFLQVPVFIGLFHVL 124
Query: 218 SNV 220
++
Sbjct: 125 RHL 127
>gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC
[Candidatus Liberibacter asiaticus str. psy62]
gi|254040160|gb|ACT56956.1| putative inner membrane protein translocase component YidC
[Candidatus Liberibacter asiaticus str. psy62]
Length = 581
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 26/200 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M ++ + + ++G AI+L TV VK+ FPL KKQ ST M+
Sbjct: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
Query: 162 NLQPKIKAIQQRYAGNQERI-QLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
N+QPKI +++++ + ++ Q +LY+ +NPLAGC P L IPV+ +Y+ +S +
Sbjct: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-I 449
Query: 221 ANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPF-VDGHPPLGWHDTAAYLVLPV 277
+ E + WI L+ PT I + +LPF + G +G + P+
Sbjct: 450 SLEMRHAPFWGWIKDLAAADPTNIFT------LFGILPFYLPGFMHVG--------IWPI 495
Query: 278 LLVVSQYASMELMKPPQARK 297
++ +S + M+ M PP A K
Sbjct: 496 IMSLSMFIQMK-MSPPPADK 514
>gi|206901409|ref|YP_002251654.1| sporulation associated-membrane protein [Dictyoglomus thermophilum
H-6-12]
gi|206740512|gb|ACI19570.1| sporulation associated-membrane protein [Dictyoglomus thermophilum
H-6-12]
Length = 209
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AII L ++V++ +PLT Q++S Q +QP+IK IQ+++ + + + + LY
Sbjct: 22 NYGVAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIKKIQEKFKDDPKEMNKQIMLLY 81
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 242
+Q +NP+ GCLP L P+ I LYQ L + +T F WI L+ P I
Sbjct: 82 QQYKINPMMGCLPLLIQFPILIALYQLLLHYKYA--VTPKFLWISDLTKPDYI 132
>gi|145630098|ref|ZP_01785880.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae R3021]
gi|144984379|gb|EDJ91802.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae R3021]
Length = 541
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|402300232|ref|ZP_10819759.1| OxaA-like protein precursor [Bacillus alcalophilus ATCC 27647]
gi|401724622|gb|EJS97967.1| OxaA-like protein precursor [Bacillus alcalophilus ATCC 27647]
Length = 254
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 25/193 (12%)
Query: 72 YTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSY 131
++LA A + + G ++ G W + + +++ L + + S+
Sbjct: 5 FSLAAAMIGMLVLLTGCFEIEQPITSESEGIWNSYFVYPLSWLIIKLAEMFNG-----SF 59
Query: 132 GFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLETSR 187
G++I+ +TVI++ PL KQ S AMQ +QP+IK +Q++Y+ Q+++Q E
Sbjct: 60 GWSIVAVTVILRTVMLPLMIKQTRSAKAMQQIQPEIKKLQEKYSAKDQKTQQKLQQEMMA 119
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
L+++ GVNPLAGCLP L +P+ +GLY A+ + EG F +L P
Sbjct: 120 LWQERGVNPLAGCLPILVQMPILLGLYHAIMRTD----IGEGSFLWFALDQP-------- 167
Query: 248 GSGISWLLPFVDG 260
++LPF+ G
Sbjct: 168 ----DYILPFIAG 176
>gi|145632386|ref|ZP_01788121.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 3655]
gi|144987293|gb|EDJ93823.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 3655]
Length = 541
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|374290987|ref|YP_005038022.1| Inner membrane insertion protein [Azospirillum lipoferum 4B]
gi|357422926|emb|CBS85768.1| Inner membrane insertion protein [Azospirillum lipoferum 4B]
Length = 575
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + L V ++G AI+LLTV VK FPL K ++ M+
Sbjct: 349 GWFYFLTKPFFYALDFFG------QVLGNFGLAILLLTVCVKAVFFPLANKSYQAMSKMK 402
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ ++++++ +Q R+ E +Y++ V+P++GCLP L IPV+ LY+ L V
Sbjct: 403 ALQPKMQELREKFSDDQARMNQELMAMYKREKVSPVSGCLPILIQIPVFFALYKVLF-VT 461
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PTTI
Sbjct: 462 IEMRHAPFFGWIHDLSSPDPTTI 484
>gi|260912766|ref|ZP_05919252.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis
ATCC 43325]
gi|260633144|gb|EEX51309.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis
ATCC 43325]
Length = 541
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ + +++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQS------IVHNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 MLQPKLQEMRERFGEDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|386266264|ref|YP_005829756.1| Inner membrane translocation protein YidC [Haemophilus influenzae
R2846]
gi|309973500|gb|ADO96701.1| Inner membrane translocation protein YidC [Haemophilus influenzae
R2846]
Length = 541
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|406891438|gb|EKD37063.1| hypothetical protein ACD_75C01273G0002 [uncultured bacterium]
Length = 555
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ ++L + D +YG AIIL+T++ K A +P+++K ++S MQ
Sbjct: 334 GWFDVIAKPTLWLLNLFYDYCR------NYGIAIILVTILFKAAFWPISQKGMKSMKNMQ 387
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ I+++Y + R+ E LY+ VNPL GCLP + IPV+ LY+ L +
Sbjct: 388 KLQPKMVKIREKYKSDPTRMNQEVMNLYKTYKVNPLGGCLPMVLQIPVFFALYKVLLQ-S 446
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL---LPFVDGHPPL 264
E WI LS P + WL +P++ G P L
Sbjct: 447 IELRHAPFMLWITDLSAPDRL----------WLGFDIPYLGGLPVL 482
>gi|319897488|ref|YP_004135685.1| inner membrane protein oxaa [Haemophilus influenzae F3031]
gi|317432994|emb|CBY81365.1| Inner membrane protein oxaA [Haemophilus influenzae F3031]
Length = 541
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|420484848|ref|ZP_14983466.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4]
gi|420515342|ref|ZP_15013805.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4c]
gi|420517043|ref|ZP_15015498.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4d]
gi|393102983|gb|EJC03546.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4]
gi|393123641|gb|EJC24109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4c]
gi|393124857|gb|EJC25323.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4d]
Length = 547
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKSEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS P I
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLSIMDPYFILPLLM 470
Query: 248 GSGISW 253
G+ + W
Sbjct: 471 GASMYW 476
>gi|145637306|ref|ZP_01792967.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittHH]
gi|145269558|gb|EDK09500.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittHH]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
Length = 249
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ +++AMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 VQLYQKHGINPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|145597099|ref|YP_001161396.1| 60 kDa inner membrane insertion protein [Salinispora tropica
CNB-440]
gi|145306436|gb|ABP57018.1| 60 kDa inner membrane insertion protein [Salinispora tropica
CNB-440]
Length = 370
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 8/106 (7%)
Query: 123 DAVHVP--------YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY 174
D + VP +++ AII L V V+V FP+ KQ++S AMQ LQP++KA+Q+++
Sbjct: 21 DVIGVPEGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQRAMQALQPQVKALQEKH 80
Query: 175 AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
G++E +Q E LYR+ NPL GCLP IPV++GL+ L +
Sbjct: 81 KGDRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRRL 126
>gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
Length = 603
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTL 158
+ GWF F+++ M F ID + + + ++G AI+L+TV +K+ FPL K S
Sbjct: 354 DWGWFYFLTKPMFF-------AIDWLFMMFGNFGVAILLVTVAIKLVFFPLANKSYVSMS 406
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
M+ +QP+++ I+ RY ++ + Q LY++ +NPLAGCLP L IPV+ LY+ L
Sbjct: 407 KMKLVQPQMQEIRDRYGDDKAKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLF 466
Query: 219 NVANEGLLTEGFFWIPSLSG--PTTI 242
V E F WI LS PTTI
Sbjct: 467 -VTIEMRHAPFFGWIQDLSAPDPTTI 491
>gi|145634176|ref|ZP_01789887.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittAA]
gi|148826353|ref|YP_001291106.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittEE]
gi|166975868|sp|A5UD72.1|YIDC_HAEIE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|145268620|gb|EDK08613.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittAA]
gi|148716513|gb|ABQ98723.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittEE]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|68249585|ref|YP_248697.1| inner membrane protein translocase component YidC [Haemophilus
influenzae 86-028NP]
gi|229843940|ref|ZP_04464081.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 6P18H1]
gi|81335986|sp|Q4QLR0.1|YIDC_HAEI8 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|68057784|gb|AAX88037.1| preprotein translocase subunit YidC [Haemophilus influenzae
86-028NP]
gi|229812934|gb|EEP48622.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 6P18H1]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|16272937|ref|NP_439163.1| inner membrane protein translocase component YidC [Haemophilus
influenzae Rd KW20]
gi|260580091|ref|ZP_05847921.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
influenzae RdAW]
gi|1168226|sp|P44973.1|YIDC_HAEIN RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|1574032|gb|AAC22663.1| inner membrane protein, 60 kDa (yidC) [Haemophilus influenzae Rd
KW20]
gi|260093375|gb|EEW77308.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
influenzae RdAW]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|90408841|ref|ZP_01216983.1| tRNA modification GTPase [Psychromonas sp. CNPT3]
gi|90310068|gb|EAS38211.1| tRNA modification GTPase [Psychromonas sp. CNPT3]
Length = 331
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GW FI++ + F L + GI ++G AIIL+T VK A +PLTK Q S
Sbjct: 116 DYGWLWFIAQPL-FKLLLFFQGIVG-----NWGVAIILITFTVKGALYPLTKAQYTSMAK 169
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ LQPKIK +++RY ++++I LY++ VNPL GC P L +P++I LY +L
Sbjct: 170 MRLLQPKIKELRERYKDDRQKISKSMMELYKKEKVNPLGGCFPILLQMPIFIALYWSL 227
>gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
HTCC2503]
gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
HTCC2503]
Length = 589
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AI+LLT+++K FPL +S M+ +QP++ I++RY ++ + Q E LY
Sbjct: 359 NWGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTKQQQEMMALY 418
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS--GPTTIAARQS 247
++ +NP AGCLP LA +P++ LY+ L L E F +IP LS PT++
Sbjct: 419 KKHKINPAAGCLPVLAQMPIFYALYKTLFVTIE--LRHEPFLYIPDLSEQDPTSV----- 471
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYL---VLPVLLVVSQYASMELMKPP 293
+ LLPF PL ++L +LP+L+ + + ++L PP
Sbjct: 472 -FNLFGLLPFDPTTVPL----IGSFLGIGILPLLMGAAMFVQLKLNPPP 515
>gi|359150824|ref|ZP_09183627.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. S4]
Length = 414
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +L
Sbjct: 19 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 78
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANE---GLLTEGFF 231
Y+ AG NPLA CLP L P + LY L+++A+ G + E
Sbjct: 79 YKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFIDEALL 124
>gi|293380888|ref|ZP_06626924.1| putative stage III sporulation protein J [Lactobacillus crispatus
214-1]
gi|423320006|ref|ZP_17297881.1| YidC/Oxa1 family membrane protein insertase [Lactobacillus
crispatus FB049-03]
gi|290922561|gb|EFD99527.1| putative stage III sporulation protein J [Lactobacillus crispatus
214-1]
gi|405586224|gb|EKB60014.1| YidC/Oxa1 family membrane protein insertase [Lactobacillus
crispatus FB049-03]
Length = 291
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 19/163 (11%)
Query: 87 GAASTSADGA----TQKNGGWFG--FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTV 140
G A+T A+G + +G W+ + F+L + K + SYG+AII+ TV
Sbjct: 28 GCATTGANGQATPISHTSGNWWDRWIVYYMSAFILGLAK------LMGNSYGWAIIVFTV 81
Query: 141 IVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQER----IQLETSRLYRQAGVNP 196
IV+V PL + ST MQ++QP+I ++++Y G +Q ET++LY++AGVNP
Sbjct: 82 IVRVILVPLNAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNP 141
Query: 197 LAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGP 239
GCLP L +PV LY A+ + L T F W+ LS P
Sbjct: 142 YTGCLPVLIQLPVMYALYGAI--LRTPQLQTGRFLWM-DLSKP 181
>gi|300719144|ref|YP_003743947.1| hypothetical protein EbC_45690 [Erwinia billingiae Eb661]
gi|299064980|emb|CAX62100.1| Inner membrane protein [Erwinia billingiae Eb661]
Length = 548
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK L I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFLHSFIG------NWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
LQPKI+A+++R +++R+ E LY+ VNPL GCLP + +P+++ LY L
Sbjct: 385 MLQPKIQAMRERIGEDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYML 440
>gi|145640676|ref|ZP_01796259.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae R3021]
gi|145274602|gb|EDK14465.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 22.4-21]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|422538829|ref|ZP_16614703.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL013PA1]
gi|313765030|gb|EFS36394.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
acnes HL013PA1]
Length = 359
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AI+ LT+ +++ PL KQ+ S +MQ +QPK+KAIQ++Y ++ER E LY
Sbjct: 51 SWTLAIVCLTIFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGDDRERAGQEMMNLY 110
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-----WIPSLSGPTTIAA 244
R GVNP A CLP L +P+++ L++ L A+ G+ FF + SL A
Sbjct: 111 RDEGVNPAASCLPVLLQMPIFLALFRVLDG-ASRGIPRGHFFAKNPGLMESLQHAKFFGA 169
Query: 245 RQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMK---PPQA 295
+G LP +G G A +++ +++ Y ++LM+ PP++
Sbjct: 170 ELAGR----FLPMNNG---FGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPES 216
>gi|90413740|ref|ZP_01221728.1| putative inner membrane protein translocase component YidC
[Photobacterium profundum 3TCK]
gi|90325209|gb|EAS41706.1| putative inner membrane protein translocase component YidC
[Photobacterium profundum 3TCK]
Length = 538
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
+T+A+ + GW FI+ + +L ++ + ++G AI++LT IV+ A +PL
Sbjct: 314 ATAANLNLTVDYGWLWFIASPLHKLLSFIQSIVG------NWGIAIMMLTFIVRGAMYPL 367
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK Q S M+ LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P+
Sbjct: 368 TKAQYTSMAKMRMLQPKLTAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPI 427
Query: 210 WIGLYQALSNVANEGLLTEGFF-WIPSLSG 238
+I LY +L + + L FF WI LS
Sbjct: 428 FIALYWSL--MESVELRHSPFFGWIHDLSA 455
>gi|378697208|ref|YP_005179166.1| insertase [Haemophilus influenzae 10810]
gi|301169726|emb|CBW29327.1| cytoplasmic insertase into membrane protein, Sec system
[Haemophilus influenzae 10810]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|302393077|ref|YP_003828897.1| YidC/Oxa1 family membrane protein insertase [Acetohalobium
arabaticum DSM 5501]
gi|302205154|gb|ADL13832.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium
arabaticum DSM 5501]
Length = 224
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVH-VPYSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
G+F E ++ ++ +D + SYG +IILLT+ ++V FPL KQ S AM
Sbjct: 7 GFFEIFGEMFGWLGGLMTGSLDFFYGFTNSYGLSIILLTLAIRVLLFPLVAKQTRSMKAM 66
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQPK++ +++ Y +Q++ Q + LY++ VNP AGCLP L +P+ I L+ ++
Sbjct: 67 QELQPKMEELKEEYGDDQQQYQQKVMELYQEHKVNPAAGCLPLLVQMPILIALFHSIRGF 126
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSG 248
E L F WI +++ P + +G
Sbjct: 127 --EALKQTSFLWISNIAQPDLVLVILTG 152
>gi|229846058|ref|ZP_04466170.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 7P49H1]
gi|229811062|gb|EEP46779.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 7P49H1]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|145628056|ref|ZP_01783857.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 22.1-21]
gi|144979831|gb|EDJ89490.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae 22.1-21]
Length = 514
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|145638178|ref|ZP_01793788.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittII]
gi|145272507|gb|EDK12414.1| putative inner membrane protein translocase component YidC
[Haemophilus influenzae PittII]
gi|309751334|gb|ADO81318.1| Inner membrane translocation protein YidC [Haemophilus influenzae
R2866]
Length = 541
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|402702809|ref|ZP_10850788.1| membrane protein insertase [Rickettsia helvetica C9P9]
Length = 560
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E + WI LS PTTI + LLPF PP A +++ + +
Sbjct: 451 IEMRQAPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E + P QA+
Sbjct: 502 FLQQKMSPEPVDPMQAQ 518
>gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.]
Length = 551
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 24/182 (13%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF F+++ + + + L I +YG IILLT+ K+ +PL K +S
Sbjct: 329 NFGWFDFLAKPVLYAMNFLYSFIP------NYGVVIILLTIFFKIIFWPLGSKSYKSMNE 382
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QP + ++++Y +++R+ E LY+ +NP+ GCLP +A +PV+ Y+ L
Sbjct: 383 MKKIQPLLAELKEKYGNDKKRMNEELMGLYKTYKINPMGGCLPMVAQLPVFFAFYRMLYE 442
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E FWI LS P + ++ +PF++ PP G +PVL
Sbjct: 443 TI-ELRHAPFVFWIKDLSAPDRLFH------FAFTIPFME--PPYG---------IPVLT 484
Query: 280 VV 281
+V
Sbjct: 485 IV 486
>gi|260581921|ref|ZP_05849717.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
influenzae NT127]
gi|260095114|gb|EEW79006.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
influenzae NT127]
Length = 541
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|442806180|ref|YP_007374329.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442742030|gb|AGC69719.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 310
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG A+IL T+IVK+ PLT KQ+ S+ + +QP+I IQ+RY ++E++ E ++LY
Sbjct: 25 NYGIALILFTLIVKLILLPLTIKQIRSSQKISEMQPEIDRIQKRYKNDKEKLNQELAKLY 84
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLY 214
++ GVNPL+GCLP P+ + LY
Sbjct: 85 QEKGVNPLSGCLPLFIQFPIIVALY 109
>gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
DSM 14484]
gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
DSM 14484]
Length = 498
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 129 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRL 188
+S+ F+I++LT++V++ FPLT K S + + L PK++ ++++Y + + Q E +L
Sbjct: 304 HSWVFSILVLTLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVKFQEELMKL 363
Query: 189 YRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
Y +AG NP++GCLP L IP++ LY+ L+ A L F WIPSL+
Sbjct: 364 YAEAGFNPMSGCLPILLQIPIFFALYKVLTITAE--LQLASFLWIPSLA 410
>gi|253690653|ref|YP_003019843.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259515701|sp|C6DK98.1|YIDC_PECCP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|251757231|gb|ACT15307.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 544
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 27 GLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLADAAVSLDSASG 86
G + +L + + + F+ P +++ S +LN+ + +A A LD
Sbjct: 268 GANTFYTNKLGNGQAAIGFKAAPVVVAAGSQQNLNATLWVGPEIQDKMAAVAPHLDLTV- 326
Query: 87 GAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVAT 146
+ GW FIS+ + +LK L I ++GF+II +T IV+
Sbjct: 327 -------------DYGWLWFISQPLFKLLKFLHGFIG------NWGFSIIAITFIVRGVM 367
Query: 147 FPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLAT 206
+PLTK Q S M+ LQPK++A+++R +++R+ E LY+ VNPL GC P L
Sbjct: 368 YPLTKAQYTSMAKMRLLQPKLQAMRERIGDDKQRMSQEMMALYKSEKVNPLGGCFPLLIQ 427
Query: 207 IPVWIGLYQAL 217
+P+++ LY L
Sbjct: 428 MPIFLALYYML 438
>gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans
NG80-2]
gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans
NG80-2]
Length = 249
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
+YG AII+LT+IV+ PL KQ +++AMQ L+P++ +Q++Y Q ++Q E
Sbjct: 54 NYGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEM 113
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 114 VQLYQKHGINPASGCLPVLIQMPIFMALYYAISR--TQEIKTHSFLWV 159
>gi|397905902|ref|ZP_10506736.1| Inner membrane protein translocase component YidC, short form
OxaI-like [Caloramator australicus RC3]
gi|397161070|emb|CCJ34071.1| Inner membrane protein translocase component YidC, short form
OxaI-like [Caloramator australicus RC3]
Length = 222
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+Y +++ T I+K PLT Q +S++ +Q +QPK+K IQ++Y + +++Q E +LY
Sbjct: 29 AYFLDLVIFTAIIKTILLPLTISQTKSSIMIQKMQPKLKEIQEKYKNDPQKMQEEQMKLY 88
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL 236
+++G NPL+GCL L P+ I +Y ++N+ +G GF W+ SL
Sbjct: 89 KESGTNPLSGCLLFLIQWPIIIAMYYVVANI--QGFKDVGFLWVESL 133
>gi|345304598|ref|YP_004826500.1| membrane protein oxaA [Rhodothermus marinus SG0.5JP17-172]
gi|345113831|gb|AEN74663.1| Membrane protein oxaA [Rhodothermus marinus SG0.5JP17-172]
Length = 607
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
+YG AII+ ++VK+A +PLT+ + M+ LQP+++AI+++YA N ++ Q +LY
Sbjct: 373 NYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREKYADNPQKQQEAMMKLY 432
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLT--EGFFWIPSLSGPTTI 242
R+ +NPL GCLP L PV I L+Q + L+ + F W LS P I
Sbjct: 433 REKKINPLGGCLPMLLQWPVLIALWQYF----QQSLIVRQQAFLWAKDLSAPDPI 483
>gi|329123023|ref|ZP_08251594.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius
ATCC 11116]
gi|327471954|gb|EGF17394.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius
ATCC 11116]
Length = 541
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 441 E--LRHAPFFGWIQDLSA 456
>gi|414165116|ref|ZP_11421363.1| inner membrane protein oxaA [Afipia felis ATCC 53690]
gi|410882896|gb|EKS30736.1| inner membrane protein oxaA [Afipia felis ATCC 53690]
Length = 611
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M + ID ++ + ++G AI+L+TVIVK FPL K S M
Sbjct: 362 GWFYFITKPMFWT-------IDHLYRLFGNFGIAILLVTVIVKAIFFPLANKSYASMAKM 414
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+ +QP++ A++++Y ++ + Q E +Y++ +NP+AGCLP IPV+ LY+ L +
Sbjct: 415 KAVQPQLAALKEKYPDDKMKQQQEMMEIYKKEKINPIAGCLPIAIQIPVFFALYKVLF-I 473
Query: 221 ANEGLLTEGFFWIPSLSGP 239
E F WI LS P
Sbjct: 474 TIEMRHAPFFGWIHDLSAP 492
>gi|297585590|ref|YP_003701370.1| YidC/Oxa1 family membrane protein insertase [Bacillus
selenitireducens MLS10]
gi|297144047|gb|ADI00805.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
selenitireducens MLS10]
Length = 296
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGN----QERIQLET 185
SYG AII++T+++++ PL KQ +ST AMQ +QP++K +QQ+Y+ QE++Q ET
Sbjct: 68 SYGLAIIIVTIMLRILILPLMIKQTKSTKAMQAIQPQMKELQQKYSAKDKKTQEKLQQET 127
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
L+++ VNPLAGCLP +P+ I Y A+
Sbjct: 128 MALFQENKVNPLAGCLPIFIQMPILIAFYHAI 159
>gi|256398143|ref|YP_003119707.1| hypothetical protein Caci_9053 [Catenulispora acidiphila DSM 44928]
gi|256364369|gb|ACU77866.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila
DSM 44928]
Length = 328
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 64/92 (69%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AII LT+ ++ A PL +KQ++S MQ LQP+I+A+Q++Y +++++Q E +LY
Sbjct: 35 SWVLAIIFLTITIRAAMIPLFRKQIKSMQNMQRLQPQIQALQKKYKLDKQKLQQEMMKLY 94
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ G +P A C+P L P ++GLY+ LS+V+
Sbjct: 95 KDNGTSPFASCMPILLQTPFFMGLYRVLSHVS 126
>gi|392381243|ref|YP_005030440.1| inner membrane insertion protein [Azospirillum brasilense Sp245]
gi|356876208|emb|CCC96971.1| inner membrane insertion protein [Azospirillum brasilense Sp245]
Length = 579
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ + L +L + ++G AI++ TVIVK A FPL K + M+
Sbjct: 352 GWFYFLTKPFFYGLDLLG------RLFGNFGIAILVFTVIVKAAFFPLANKSYHAMAKMK 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK+ ++ R+ ++ R+ E LY++ V+P++GCLP L IPV+ LY+ L V
Sbjct: 406 KLQPKMMELRDRFGDDKVRLNQEMMALYKREKVSPVSGCLPILIQIPVFFALYKVLF-VT 464
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PTTI
Sbjct: 465 IEMRHAPFFGWIHDLSAPDPTTI 487
>gi|15605744|ref|NP_213121.1| hypothetical protein aq_175 [Aquifex aeolicus VF5]
gi|38502858|sp|O66561.1|OXAA_AQUAE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|2982916|gb|AAC06534.1| hypothetical protein aq_175 [Aquifex aeolicus VF5]
Length = 502
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ +I++LT IV++ FPL K V S +Q L PK++ I+Q+Y + ++Q E +LY
Sbjct: 311 SWVLSILVLTFIVRIFLFPLGYKSVVSMQKLQELAPKMEKIKQKYKDDPVKMQEEMMKLY 370
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
+ G NP+AGCLP L IP++ LY+ L + L F WIPSL+
Sbjct: 371 AETGFNPMAGCLPILLQIPIFFALYKVL--IITVDLKVSSFLWIPSLA 416
>gi|291277160|ref|YP_003516932.1| hypothetical protein HMU09470 [Helicobacter mustelae 12198]
gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198]
Length = 546
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 64/90 (71%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LTVIVK+ +PL+ K + S +++L PK+K IQ++Y G+ +++Q+ +LY
Sbjct: 348 NWGWAIITLTVIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQEKYKGDPQKLQMHMMQLY 407
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
++ G NP+ GCLP L IP++ +Y+ L N
Sbjct: 408 KKHGANPMGGCLPLLIQIPIFYAIYRVLYN 437
>gi|340029434|ref|ZP_08665497.1| membrane protein insertase [Paracoccus sp. TRP]
Length = 639
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 22/202 (10%)
Query: 17 PSPSSSLSRHGLHRLPNRRLASTRVRLSFQEIPPILSLDSSIDLNSVFSRTESLLYTLAD 76
P+P + + +P + T R+ Q + P S+ +S Y A
Sbjct: 306 PAPGQGFTA-AVKYVPGADIYQTEARMPMQTVAPGASVTTSS-------------YLFAG 351
Query: 77 AAVSLDSASGGAASTSADGATQK-NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAI 135
A V + SG A+ DG + GWF F+++ + +L L I + G++I
Sbjct: 352 AKV-WEVISGYEANPGIDGFVDSIDWGWFYFLTKPIFRLLHWLHGMIG------NMGWSI 404
Query: 136 ILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVN 195
I LT ++K+ FPL +K S M+ LQP+++AI++R ++ + Q E LY++ VN
Sbjct: 405 IALTFVLKLLVFPLARKSYISMAKMKELQPQMEAIKERTGDDRMKFQKEVMELYKREKVN 464
Query: 196 PLAGCLPTLATIPVWIGLYQAL 217
P AGCLP L IP++ LY+ +
Sbjct: 465 PAAGCLPVLLQIPIFFALYKVI 486
>gi|332668063|ref|YP_004450851.1| membrane protein OxaA [Haliscomenobacter hydrossis DSM 1100]
gi|332336877|gb|AEE53978.1| Membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100]
Length = 634
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S G I++LT +VK+ FPLT + + S M L+P+I+ +++RY +Q+++Q+ET +Y
Sbjct: 382 SKGIVILMLTFMVKLLLFPLTYRMIYSQSKMTALKPEIERLKERYGDDQQKVQMETMSMY 441
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
R+ GVNPL C P L +P+W LY+ A+ F W LS
Sbjct: 442 REFGVNPLGACFPMLLQLPIWFALYRFFP--ASIEFRQASFLWATDLS 487
>gi|227820669|ref|YP_002824639.1| inner membrane protein translocase component YidC [Sinorhizobium
fredii NGR234]
gi|254773017|sp|C3MF49.1|YIDC_RHISN RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|227339668|gb|ACP23886.1| putative inner membrane protein translocase component YidC
[Sinorhizobium fredii NGR234]
Length = 592
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 36/201 (17%)
Query: 102 GWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ M+F ++ + +G AI++ T++VK+ FPL KQ S
Sbjct: 348 GWFWFITQPMFKMMDFFFRLFGN----------FGVAILVTTIVVKLIFFPLANKQYASM 397
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QPK++ +++++ ++ +Q +LY+ +NPLAGC P L IPV+ LY+ +
Sbjct: 398 ANMKKVQPKMEELKKKFGDDRMGLQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVI 457
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-- 273
+ E F WI LS PTTI + LLPF D A+L
Sbjct: 458 Y-ITIEMRHAPFFGWIRDLSAPDPTTIV------NLFGLLPF----------DGPAFLHL 500
Query: 274 -VLPVLLVVSQYASMELMKPP 293
+ P+++ V+ + M + P
Sbjct: 501 GIWPIIMGVTMFLQMRMNPTP 521
>gi|317050194|ref|YP_004117842.1| YidC/Oxa1 family membrane protein insertase [Pantoea sp. At-9b]
gi|316951811|gb|ADU71286.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Pantoea sp. At-9b]
Length = 548
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FIS+ + +LK + I ++GF+II++T IV+ +PLTK Q S M+
Sbjct: 331 GWLWFISQPLFKLLKFIHSFIG------NWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 384
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
LQPKI+A+++R +++++ E LY+ VNPL GCLP + +P+++ LY LS
Sbjct: 385 MLQPKIQAMRERLGDDKQKMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLS 441
>gi|349700019|ref|ZP_08901648.1| translocase inner membrane component [Gluconacetobacter europaeus
LMG 18494]
Length = 586
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F++ + VL L + ++G A++ T++VK FPL KQ S M+
Sbjct: 340 GWFAFLTRPIFTVLDWLNTMLG------NFGLALMAFTLLVKALFFPLATKQFHSMGKMR 393
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPKIKA+++RY +Q + + LY+Q VNP +GCLP L IPV+ LY+ L V
Sbjct: 394 QLQPKIKALRERYKDDQMALNQQMIALYKQEKVNPASGCLPMLLQIPVFWCLYKDLY-VT 452
Query: 222 NEGLLTEGFFWIPSLS 237
E F WI LS
Sbjct: 453 IEMRHAPFFGWIHDLS 468
>gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24]
gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24]
Length = 431
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T M
Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|52424536|ref|YP_087673.1| putative inner membrane protein translocase component YidC
[Mannheimia succiniciproducens MBEL55E]
gi|81691469|sp|Q65VC2.1|YIDC_MANSM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|52306588|gb|AAU37088.1| YidC protein [Mannheimia succiniciproducens MBEL55E]
Length = 540
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII +T++VK +PLTK Q S M+
Sbjct: 326 GWAWFIAKPLFWLLNVIQSIVS------NWGLAIIGVTIVVKGILYPLTKAQYTSMAKMR 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 380 MLQPKLQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPLLIQMPIFIALYWTFMEAV 439
Query: 222 NEGLLTEGFF-WIPSLSG 238
L FF WI LS
Sbjct: 440 E--LRHAPFFGWIQDLSA 455
>gi|21222290|ref|NP_628069.1| inner membrane protein translocase component YidC [Streptomyces
coelicolor A3(2)]
gi|38502851|sp|O54569.1|YIDC_STRCO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)]
gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)]
gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 431
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T M
Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|418467947|ref|ZP_13038800.1| putative inner membrane protein translocase component YidC
[Streptomyces coelicoflavus ZG0656]
gi|371551440|gb|EHN78735.1| putative inner membrane protein translocase component YidC
[Streptomyces coelicoflavus ZG0656]
Length = 431
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 104 FGFISEAMEFVLKILKDGIDAVHVP---YSYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
F FI+ + +V+ A+ P +++G +I+ L +++++ PL KQ+++T M
Sbjct: 8 FSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRGM 67
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
Q LQP++K IQ+RY +++R E +LY++ G NPL+ CLP LA P + LY L+ +
Sbjct: 68 QTLQPEMKKIQERYKNDKQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGI 127
Query: 221 AN 222
A+
Sbjct: 128 AS 129
>gi|91974551|ref|YP_567210.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris BisB5]
gi|91681007|gb|ABE37309.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB5]
Length = 621
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L H+ ++G AI+L+TV+VK+ PL K S M+
Sbjct: 372 GWFYFITKPMFLALDFF------FHLVGNFGVAILLVTVLVKLIFLPLANKSYASMAKMK 425
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A+++R+ ++ + Q E +YR+ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 426 AIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VT 484
Query: 222 NEGLLTEGFFWIPSLS 237
E F WI LS
Sbjct: 485 IEMRHAPFFGWIHDLS 500
>gi|374329450|ref|YP_005079634.1| inner membrane protein translocase component YidC [Pseudovibrio sp.
FO-BEG1]
gi|359342238|gb|AEV35612.1| inner membrane protein translocase component YidC [Pseudovibrio sp.
FO-BEG1]
Length = 603
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M + + L + ++G AI+L+TVIVK FPL K S M+
Sbjct: 358 GWFYFLTKPMFWTIDWLYSLVG------NFGIAILLVTVIVKAIFFPLANKSYVSMSRMK 411
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+ I+++Y ++++ Q LY+ +NPLAGCLP L IPV+ LY+ L V
Sbjct: 412 LVQPKMTEIREKYKDDKQKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLF-VT 470
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PTTI
Sbjct: 471 IEMRHAPFFGWIQDLSAPDPTTI 493
>gi|442770568|gb|AGC71280.1| inner membrane protein translocase component YidC, long form
[uncultured bacterium A1Q1_fos_140]
Length = 314
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
S+ AII LTV+++ PL KQ++++ M LQPK+K +Q++Y ++ER+ ET +LY
Sbjct: 41 SWVLAIIGLTVVIRALLIPLFVKQIKASRNMALLQPKVKELQKKYGHDRERLAQETMKLY 100
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN---EGLLTEGFFWIPSLSGPTTIAARQ 246
R + NPLA C+P L +P+++ L++ L++ AN +G+LTE + LS T A+
Sbjct: 101 RDSKTNPLASCMPILIQMPIFLALFRLLNHAANGVPKGVLTETD--VEHLSNATIFGAKI 158
Query: 247 SGS 249
+ S
Sbjct: 159 ADS 161
>gi|420414300|ref|ZP_14913420.1| inner membrane protein oxaA [Helicobacter pylori NQ4099]
gi|393026634|gb|EJB27731.1| inner membrane protein oxaA [Helicobacter pylori NQ4099]
Length = 548
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AII LT+IV++ +PL+ K + S ++ L PK+K +Q++Y G +++Q +LY
Sbjct: 352 NWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLY 411
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 237
++ G NPL GCLP + IPV+ +Y+ L N A E +E WI LS
Sbjct: 412 KKHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS 458
>gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 560
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E + WI LS PTTI + LLPF+ PP A +++ + +
Sbjct: 451 IEMRQAPFYGWIKDLSAPDPTTIF------NLFGLLPFL---PPSFLMIGAWPILMAITM 501
Query: 280 VVSQYASMELMKPPQAR 296
+ Q S E P QA+
Sbjct: 502 FLQQKMSPEPADPMQAQ 518
>gi|212639373|ref|YP_002315893.1| stage III sporulation protein J essential for sigma-G activity
[Anoxybacillus flavithermus WK1]
gi|212560853|gb|ACJ33908.1| Stage III sporulation protein J essential for sigma-G activity
[Anoxybacillus flavithermus WK1]
Length = 260
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG----NQERIQLET 185
+YG AI+ LT++V+ PL KQ + + MQ ++P+++ +QQ+Y G Q ++Q E
Sbjct: 64 NYGLAIVALTIVVRFGLLPLMIKQFRTNIVMQRIRPEMQKLQQKYKGTDMETQRKLQQEM 123
Query: 186 SRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
+LY++ GVNP++GCLP +P+++ LY A+S E + F W+
Sbjct: 124 MQLYQKHGVNPMSGCLPIFIQMPIFMALYYAISR--TEEIKLHSFLWM 169
>gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|396079055|dbj|BAM32431.1| conserved hypothetical protein [Helicobacter cinaedi ATCC BAA-847]
Length = 599
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G+AI+LLT+IV+V +PLT + + S +++L PK+K +Q RY + +++Q+ LY
Sbjct: 382 NWGWAIVLLTLIVRVVLYPLTYRGMVSMQKLKDLAPKMKELQARYKDDPQKLQIHMMDLY 441
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
++ G NP+ GCLP + IPV+ +Y+ L N A E + WI LS
Sbjct: 442 KKHGANPIGGCLPLILQIPVFFAIYRVLHN-AVELKSSAWILWIDDLSA----------- 489
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMEL 289
+D Y VLPVL+ +S Y S L
Sbjct: 490 --------ID-----------PYFVLPVLMGLSMYVSQRL 510
>gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
Length = 603
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF F+++ M + + L + ++G AI+L+TVIVK FPL K S M+
Sbjct: 358 GWFYFLTKPMFWTIDWLYSLVG------NFGIAILLVTVIVKAIFFPLANKSYVSMSRMK 411
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QPK+ I+++Y ++++ Q LY+ +NPLAGCLP L IPV+ LY+ L V
Sbjct: 412 LVQPKMTEIREKYKDDKQKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLF-VT 470
Query: 222 NEGLLTEGFFWIPSLSG--PTTI 242
E F WI LS PTTI
Sbjct: 471 IEMRHAPFFGWIQDLSAPDPTTI 493
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,517,364,508
Number of Sequences: 23463169
Number of extensions: 180022079
Number of successful extensions: 551433
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 894
Number of HSP's that attempted gapping in prelim test: 544976
Number of HSP's gapped (non-prelim): 5161
length of query: 297
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 156
effective length of database: 9,050,888,538
effective search space: 1411938611928
effective search space used: 1411938611928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)