Your job contains 1 sequence.
>022439
MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD
VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRK
GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
SSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTMG
QPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022439
(297 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 920 2.4e-92 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 639 1.4e-62 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 483 1.6e-53 2
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 526 1.3e-50 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 525 1.7e-50 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 502 4.7e-48 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 466 3.1e-44 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 448 2.5e-42 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 447 3.2e-42 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 246 2.4e-35 2
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 375 1.3e-34 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 220 1.1e-31 2
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 304 4.5e-27 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 288 2.2e-25 1
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 283 7.6e-25 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 281 1.2e-24 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 265 6.1e-23 1
TAIR|locus:2075760 - symbol:AT3G10590 species:3702 "Arabi... 261 1.6e-22 1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702... 214 1.6e-17 1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702... 212 2.5e-17 1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702... 210 4.1e-17 1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3... 205 1.4e-16 1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA... 199 6.0e-16 1
TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702... 199 6.0e-16 1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ... 189 6.9e-15 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 184 6.5e-12 1
TAIR|locus:504955890 - symbol:AT3G10595 species:3702 "Ara... 108 1.5e-11 2
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 154 4.9e-08 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 136 5.4e-08 2
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species... 127 7.4e-08 1
UNIPROTKB|F1NUR7 - symbol:DNAJC1 "Uncharacterized protein... 139 1.0e-06 1
RGD|2322144 - symbol:Dnajc1 "DnaJ (Hsp40) homolog, subfam... 134 3.7e-06 1
MGI|MGI:103268 - symbol:Dnajc1 "DnaJ (Hsp40) homolog, sub... 134 4.5e-06 1
UNIPROTKB|F1P3V8 - symbol:DNAJC2 "Uncharacterized protein... 133 6.9e-06 1
UNIPROTKB|F1MJX8 - symbol:LOC781036 "Uncharacterized prot... 131 9.6e-06 1
UNIPROTKB|F1MK90 - symbol:LOC781036 "Uncharacterized prot... 131 9.7e-06 1
UNIPROTKB|F1PMR9 - symbol:DNAJC1 "DnaJ homolog subfamily ... 130 1.3e-05 1
UNIPROTKB|Q96KC8 - symbol:DNAJC1 "DnaJ homolog subfamily ... 129 1.7e-05 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 123 5.3e-05 1
ZFIN|ZDB-GENE-061103-529 - symbol:dnajc1 "DnaJ (Hsp40) ho... 124 5.7e-05 1
UNIPROTKB|Q6P2Y3 - symbol:dnajc2 "DnaJ homolog subfamily ... 124 7.2e-05 1
UNIPROTKB|I3L6W6 - symbol:DNAJC1 "Uncharacterized protein... 123 7.8e-05 1
TAIR|locus:2163573 - symbol:maMYB "membrane anchored MYB"... 119 8.5e-05 1
ZFIN|ZDB-GENE-040426-1912 - symbol:dnajc2 "DnaJ (Hsp40) h... 123 9.4e-05 1
MGI|MGI:99470 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subf... 122 0.00012 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 118 0.00013 1
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 118 0.00016 1
UNIPROTKB|I3LNQ0 - symbol:I3LNQ0 "Uncharacterized protein... 119 0.00020 1
UNIPROTKB|I3LSN5 - symbol:I3LSN5 "Uncharacterized protein... 119 0.00020 1
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 115 0.00023 1
UNIPROTKB|Q1RMH9 - symbol:DNAJC2 "DnaJ homolog subfamily ... 119 0.00027 1
UNIPROTKB|Q99543 - symbol:DNAJC2 "DnaJ homolog subfamily ... 119 0.00027 1
UNIPROTKB|F1SB54 - symbol:DNAJC2 "Uncharacterized protein... 119 0.00027 1
UNIPROTKB|Q4R8H2 - symbol:DNAJC2 "DnaJ homolog subfamily ... 119 0.00027 1
RGD|620524 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfami... 119 0.00027 1
UNIPROTKB|E2RS54 - symbol:DNAJC2 "Uncharacterized protein... 119 0.00027 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 112 0.00049 1
DICTYBASE|DDB_G0278317 - symbol:mybF "myb domain-containi... 103 0.00055 2
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 116 0.00061 1
DICTYBASE|DDB_G0287637 - symbol:mybD "myb domain-containi... 115 0.00071 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 110 0.00080 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 111 0.00081 1
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 194/309 (62%), Positives = 215/309 (69%)
Query: 1 MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60
MTV+EV SVW++E D AFE AL + +++ +RWEKIAADVPGKS+E+IK+HYELLV+D
Sbjct: 1 MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60
Query: 61 VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRK 120
V RIESGCVPLP+Y S +GS HAGDEG S+ KKGG+ H ESN S+SDQERRK
Sbjct: 61 VTRIESGCVPLPAYGSP-EGSNGHAGDEGASS-KKGGN-SHAG-ESNQAGKSKSDQERRK 116
Query: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 117 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 176
Query: 181 SSIHDITSVNNGDISAPQGPITGQTNXX---------XXXXXXXXXXXQPPQH-SAGPPG 230
SSIHDITSV N D+S PQGPITGQ N Q S PPG
Sbjct: 177 SSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPG 236
Query: 231 VGMYGAPTMGQPIGGPLVSAVGTPVNLPAPAHMAYXXXXXXXXXXXX-XXXMNVSPMPYP 289
MYG P +GQP AVGTPVNLPAP HMAY MN+ MPY
Sbjct: 237 PPMYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYT 289
Query: 290 MPHA-SAHR 297
MP +AHR
Sbjct: 290 MPRTPTAHR 298
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 140/273 (51%), Positives = 176/273 (64%)
Query: 10 SVWTKEQDKAFENALVSY---PEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIES 66
+ W++E++KAFENA+ + E D+W K+++ VP K+LEE+K+HY++L++DV IE+
Sbjct: 6 ATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIEN 65
Query: 67 GCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFN-----------SESNGNKS--SR 113
G VPLP Y+ + A TS + H + S SNG +S SR
Sbjct: 66 GQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSR 125
Query: 114 SDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS 173
++QERRKGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNS
Sbjct: 126 AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 185
Query: 174 MNKDRRRSSIHDITSVNNGDISAPQGPITGQTNXXXXXXXXXXXXXQPPQHSAGPP---G 230
MN+DRRRSSIHDIT+VNN + G Q QP QH PP G
Sbjct: 186 MNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQHH--PPTMAG 243
Query: 231 VGMYGAPTMGQPIGGP---LVSAVGTPVNLPAP 260
+GMYG +GQPI P + SAVGTPV LP P
Sbjct: 244 LGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPP 276
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 483 (175.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 103/201 (51%), Positives = 129/201 (64%)
Query: 5 EVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRI 64
E+ S W+K+ D AFE AL Y + RW+KIA VPGK+LE++ +HY +L DV I
Sbjct: 6 EISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLI 65
Query: 65 ESGCVPLPSYNSSSDGSMSHA-GDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIA 123
ESGCV LP Y+ + +A G E + +GG+ + S+ G S+ Q+RR+G+
Sbjct: 66 ESGCVRLPDYDDFLEEPNHNAFGKERSI--LEGGNDRKYESKHKGK--SKLKQKRRRGVP 121
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
W EHR FL GL KYGKGDWRSISR+ VVTRT TQVASHAQKYF +NS +K R+R SI
Sbjct: 122 WKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSI 181
Query: 184 HDITSVNNGDISAPQGPITGQ 204
HDIT N IS Q PIT Q
Sbjct: 182 HDITIAENKSISTKQRPITWQ 202
Score = 88 (36.0 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 223 QHSAGPPGVGMYGAPTMGQPIGGPLVSAVGTPVNLPAPAHM 263
Q SA P MYG T+ QP+ GP++S GT +N AP+HM
Sbjct: 268 QPSANIP---MYGTSTISQPMVGPMLSPFGTNLNHLAPSHM 305
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 101/195 (51%), Positives = 140/195 (71%)
Query: 3 VDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVN 62
++E S++ WT ++KAFENAL + E+ +RWE++A VPGK++ ++ + Y+ L DDV+
Sbjct: 17 LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76
Query: 63 RIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGI 122
IE+G VP+P Y++SS ++ G K+ YG +S+ + S +QER+KG+
Sbjct: 77 SIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQS--YGTGGRKSSSGRPS--EQERKKGV 132
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSS 182
WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR S KD+RR+S
Sbjct: 133 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRAS 192
Query: 183 IHDITSVNNGDISAP 197
IHDIT+VN D P
Sbjct: 193 IHDITTVNLSDNQTP 207
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 100/184 (54%), Positives = 132/184 (71%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIES 66
G + WT ++KAFENAL Y ++ DRW+K+AA +PGK++ ++ + Y L DV+ IE+
Sbjct: 29 GEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEA 88
Query: 67 GCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTE 126
G +P+P Y +S ++ AG G NG K GH N S +S + ER+KG+ WTE
Sbjct: 89 GLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQV-CNKRSQAGRSP--ELERKKGVPWTE 145
Query: 127 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 186
+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR S KD+RR+SIHDI
Sbjct: 146 EEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDI 205
Query: 187 TSVN 190
T+VN
Sbjct: 206 TTVN 209
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 96/185 (51%), Positives = 130/185 (70%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT E++K FENAL Y +D DRW ++AA +PGK++ ++ + Y L +DV+ IE+G +P+
Sbjct: 29 WTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLIPI 88
Query: 72 PSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRS---DQERRKGIAWTEDE 128
P Y S S ++ G +G S G++ S + G + S + + ER+KG+ WTE+E
Sbjct: 89 PGYASDSF-TLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHERKKGVPWTEEE 147
Query: 129 HRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 188
HR FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR + KD+RRSSIHDIT+
Sbjct: 148 HRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDITT 207
Query: 189 VNNGD 193
VN D
Sbjct: 208 VNIPD 212
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 96/191 (50%), Positives = 129/191 (67%)
Query: 9 SSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGC 68
SS WTKE++K FE AL Y +D DRW K+AA +PGK++ ++ + Y L +D+ IE+G
Sbjct: 28 SSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGL 87
Query: 69 VPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTEDE 128
VP+P Y S ++ G + + + + + NG + DQ+RRKG+ WTE+E
Sbjct: 88 VPIPGYRS-----VTPCGFDQVVSPRD---FDAYRKLPNGARGF--DQDRRKGVPWTEEE 137
Query: 129 HRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 188
HR FLLGL KYGKGDWR+ISRNFV ++TPTQVASHAQKY+ R S KD+RR SIHDIT+
Sbjct: 138 HRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 197
Query: 189 VN--NGDISAP 197
VN N ++S P
Sbjct: 198 VNLLNANLSRP 208
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 97/233 (41%), Positives = 135/233 (57%)
Query: 10 SVWTKEQDKAFENALVSYPEDAS--DRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESG 67
+ WT E++K FE AL +Y +D + W KIA +PGK++ ++ + Y+ L DDV+ IE+G
Sbjct: 28 ATWTAEENKRFEKAL-AYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAG 86
Query: 68 CVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHY---GHFNSESNGN--KSSRSDQERRKGI 122
+P+P Y + + + G N G Y G +S + + +S ++ER+KG+
Sbjct: 87 LIPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSPAMTDCFRSPMPEKERKKGV 146
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSS 182
WTEDEH FL+GL KYGKGDWR+I+++FV TRTPTQVASHAQKYF+R + KD+RRSS
Sbjct: 147 PWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSS 206
Query: 183 IHDITSVNNGDISAPQGPITGQTNXXXXXXXXXXXXXQP-PQHSAGPPGVGMY 234
IHDIT+VN D A T QP P +S Y
Sbjct: 207 IHDITTVNIPDADASATATTADVALSPTPANSFDVFLQPNPHYSFASASASSY 259
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 96/183 (52%), Positives = 126/183 (68%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESG 67
SS WTKE++K FE AL Y ED+ DRW K+A+ +PGK++ ++ + Y L +DV IE+G
Sbjct: 29 SSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAG 88
Query: 68 CVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTED 127
VP+P Y ++S S G + T +K +G + S DQ+R+KG+ WTE+
Sbjct: 89 RVPIPGYPAAS----SPLGFD-TDMCRK---------RPSGARGS--DQDRKKGVPWTEE 132
Query: 128 EHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 187
EHR FLLGL KYGKGDWR+ISRNFVV++TPTQVASHAQKY+ R S KD+RR SIHDIT
Sbjct: 133 EHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDIT 192
Query: 188 SVN 190
+ N
Sbjct: 193 TGN 195
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 246 (91.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 48/88 (54%), Positives = 63/88 (71%)
Query: 110 KSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
KS ++KGI W+ +EHRLFL GL+KYGKGDW+SISR V +R+P QVASHAQKYF+
Sbjct: 83 KSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFL 142
Query: 170 RLNSMNKDRRRSSIHDITSVNNGDISAP 197
R NK +R SIHD+T + +++ P
Sbjct: 143 R--QKNKKGKRFSIHDMTLGDAENVTVP 168
Score = 152 (58.6 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 38/89 (42%), Positives = 49/89 (55%)
Query: 11 VWTKEQDKAFENALVSYPEDAS-DRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCV 69
+W ++ DK FE ALV +P + S D E IA + K L+E+ +Y+ LVDDV IESG
Sbjct: 7 IWKRDDDKRFELALVRFPAEGSPDFLENIAQFLQ-KPLKEVYSYYQALVDDVTLIESGKY 65
Query: 70 PLPSYNSSSDGSMSHAGDEGTSN-GKKGG 97
PLP Y S+ A T GKK G
Sbjct: 66 PLPKYPEDDYVSLPEATKSKTQGTGKKKG 94
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 83/167 (49%), Positives = 109/167 (65%)
Query: 40 ADVPGKSLEEIKQHYELLVDDVNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHY 99
AD KS E+++HYE+LV DV I+SG V +P Y D + + AG + G +
Sbjct: 33 ADQLHKSAGEVREHYEVLVHDVFEIDSGRVDVPDY--MDDSAAAAAGWDSAGQISFGSKH 90
Query: 100 GHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQ 159
G + ER++G WTE+EH+LFL+GL +YGKGDWRSISRN VVTRTPTQ
Sbjct: 91 G--------------ESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQ 136
Query: 160 VASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPI--TGQ 204
VASHAQKYF+R NS+ K+R+RSSIHDIT+V+ ++ P + TGQ
Sbjct: 137 VASHAQKYFLRQNSVKKERKRSSIHDITTVD-ATLAMPGSNMDWTGQ 182
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESG 67
+SS WT+ +DK FE ALV +PE + +RWE+IA D KS E+++HYE+LV DV I+SG
Sbjct: 2 ASSQWTRSEDKMFEQALVLFPEGSPNRWERIA-DQLHKSAGEVREHYEVLVHDVFEIDSG 60
Query: 68 CVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYG 100
V +P Y D + + AG + G +G
Sbjct: 61 RVDVPDY--MDDSAAAAAGWDSAGQISFGSKHG 91
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 220 (82.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 41/70 (58%), Positives = 54/70 (77%)
Query: 118 RRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKD 177
++ GI W+E+E RLFL GL+K+GKGDW++ISR V +RT TQVASHAQKYF R + +
Sbjct: 87 KKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTN 146
Query: 178 RRRSSIHDIT 187
+R SIHD+T
Sbjct: 147 TKRPSIHDMT 156
Score = 143 (55.4 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT+ DK FE AL+ PE + + E IA + K ++E++ +Y LV D+ RIESG L
Sbjct: 7 WTRVDDKRFELALLQIPEGSPNFIENIAYYLQ-KPVKEVEYYYCALVHDIERIESGKYVL 65
Query: 72 PSYNSSSDGSMSHAGDEGTSNGKKGG 97
P Y ++ AG E NGKK G
Sbjct: 66 PKYPEDDYVKLTEAG-ESKGNGKKTG 90
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 67/131 (51%), Positives = 87/131 (66%)
Query: 76 SSSDGSMSH-----AGDEGT-SN--GKKGGHYGHFNSESNGNKS----SRSDQERRKGIA 123
S+S G++SH +G GT SN G G H + ++ S S +ER+KG
Sbjct: 38 SASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTP 97
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
WTE+EHR+FLLGL K GKGDWR ISRN+V TRTPTQVASHAQKYFIR +++++ +RRSS+
Sbjct: 98 WTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSL 157
Query: 184 HDITSVNNGDI 194
D+ GDI
Sbjct: 158 FDMVPDEVGDI 168
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 56/88 (63%), Positives = 68/88 (77%)
Query: 100 GHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQ 159
G + S+ + S R+ +ER++G WTE+EHRLFL GL K GKGDWR ISRNFV TRTPTQ
Sbjct: 77 GGYASDDVVHASGRN-RERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQ 135
Query: 160 VASHAQKYFIRLNSMNKDRRRSSIHDIT 187
VASHAQKYF+R + N+ RRRSS+ DIT
Sbjct: 136 VASHAQKYFLRRTNQNRRRRRSSLFDIT 163
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 52/90 (57%), Positives = 71/90 (78%)
Query: 100 GHFNSE-SNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPT 158
G+ + + ++G+ SS ER++G+ WTE+EHRLFL+GL K GKGDWR ISRN+V +RTPT
Sbjct: 114 GYLSDDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPT 173
Query: 159 QVASHAQKYFIRLNSMNKDRRRSSIHDITS 188
QVASHAQKYFIR S ++ +RRSS+ D+ +
Sbjct: 174 QVASHAQKYFIRHTSSSRRKRRSSLFDMVT 203
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 52/99 (52%), Positives = 73/99 (73%)
Query: 102 FNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVA 161
+ S ++ + S S R++G+ WTE+EH+ FL+GL K GKGDW+ ISRNFV +RTPTQVA
Sbjct: 82 YASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVA 141
Query: 162 SHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGP 200
SHAQKYF+R ++N+ RRRSS+ DIT+ +++ Q P
Sbjct: 142 SHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDP 180
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/132 (47%), Positives = 83/132 (62%)
Query: 85 AGDEGTSNGKKGGHYGHFNSESNG---NKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGK 141
A DE +G S+G +K ++ E++KG WTE+EHR FL+GL+K GK
Sbjct: 68 ANDESNGSGDPIAAVDDTGYHSDGQIHSKKGKTAHEKKKGKPWTEEEHRNFLIGLNKLGK 127
Query: 142 GDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT-------SVNNGDI 194
GDWR I+++FV TRTPTQVASHAQKYFIRLN +K +RR+S+ DI+ N+ D
Sbjct: 128 GDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDISLEDQKEKERNSQDA 187
Query: 195 SA---PQGPITG 203
S P+ PITG
Sbjct: 188 STKTPPKQPITG 199
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 55/102 (53%), Positives = 72/102 (70%)
Query: 87 DEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRS 146
DE N G+ E+ SS ER++G+ WTE+EH+LFLLGL + GKGDW+
Sbjct: 63 DEQDMNKTPAGYASA--DEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKG 120
Query: 147 ISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 188
ISRNFV TRT TQVASHAQKYF+R +++N+ RRRSS+ D+T+
Sbjct: 121 ISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTT 162
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/76 (61%), Positives = 62/76 (81%)
Query: 117 ERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR-LNSMN 175
+R+KG+ WT +EHR FL+GL+K GKGDWR ISRNFVVT++PTQVASHAQKYF+R +++
Sbjct: 86 DRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLH 145
Query: 176 KDRRRSSIHDITSVNN 191
RRR+S+ D+ S N
Sbjct: 146 HKRRRTSLFDMVSAGN 161
>TAIR|locus:2075760 [details] [associations]
symbol:AT3G10590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY550300 EMBL:DQ446652 IPI:IPI00540507
RefSeq:NP_187670.1 UniGene:At.50167 ProteinModelPortal:Q9SQY9
SMR:Q9SQY9 PRIDE:Q9SQY9 EnsemblPlants:AT3G10590.1 GeneID:820227
KEGG:ath:AT3G10590 TAIR:At3g10590 InParanoid:Q9SQY9
PhylomeDB:Q9SQY9 ArrayExpress:Q9SQY9 Genevestigator:Q9SQY9
Uniprot:Q9SQY9
Length = 206
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 74/200 (37%), Positives = 107/200 (53%)
Query: 6 VGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV---N 62
+ SS WT++ ++ F++AL +P D + R +A +P K LEE+K +YE LV+DV
Sbjct: 1 MASSPRWTEDDNRRFKSALSQFPPD-NKRLVNVAQHLP-KPLEEVKYYYEKLVNDVYLPK 58
Query: 63 RIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGI 122
+E+ L + M + ++ ++ + Y +ES+ +K + D
Sbjct: 59 PLENVTQHLQKPMEMEE--MKYMYEKMANDVNQMPEYVPL-AESSQSKRRKKDTPN---- 111
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSS 182
WTE+EHRLFL GL KYG+G S NFV T+TP QV+SHAQ Y+ R S NK +R S
Sbjct: 112 PWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRRS 170
Query: 183 IHDIT--SVNNGDISAPQGP 200
I DIT S S Q P
Sbjct: 171 IFDITLESTEGNPDSGNQNP 190
>TAIR|locus:2136283 [details] [associations]
symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
Length = 100
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESG 67
SS WT +Q+KAFE AL +Y +D +RW+ +A V GK+ EE+K+HYELLV D+N IE+G
Sbjct: 10 SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69
Query: 68 CVPLPSYNSS 77
VP P+Y +S
Sbjct: 70 HVPFPNYRTS 79
>TAIR|locus:2115260 [details] [associations]
symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
Genevestigator:Q6NNN0 Uniprot:Q6NNN0
Length = 81
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 1 MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60
M + + SS+ WT++++K FE AL +Y +D DRW +A V GKS EE+++HYELL+ D
Sbjct: 1 MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60
Query: 61 VNRIESGCVPLPSYNSSSD 79
VN IESG P P+Y S+ +
Sbjct: 61 VNDIESGRYPHPNYRSNGN 79
>TAIR|locus:2016417 [details] [associations]
symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
Length = 100
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 1 MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60
M + SSS WT +Q+K FE AL Y +D DRW+ +A V KS EE+K+HY++LV+D
Sbjct: 1 MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60
Query: 61 VNRIESGCVPLPSYNSSSDGSMSHAGDE 88
+ IE VPLP Y + GS S D+
Sbjct: 61 LMNIEQDLVPLPKYKTVDVGSKSRGIDD 88
>TAIR|locus:4010713631 [details] [associations]
symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
Length = 77
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESG 67
S+S WT +DK FE AL + +D DRW+KIA V GKS EE+K+HYELL+ DVN IESG
Sbjct: 7 STSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESG 66
Query: 68 CVPLPSYNSSS 78
P P Y +++
Sbjct: 67 RYPQPRYRNTN 77
>UNIPROTKB|Q58FS3 [details] [associations]
symbol:RAD "Transcription factor RADIALIS" species:4151
"Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
[GO:0048262 "determination of dorsal/ventral asymmetry"
evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
Length = 93
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIES 66
GS W+ +++KAFE AL Y +D DRW +A V G++ EE+K+HYE+LV+D+ IES
Sbjct: 6 GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65
Query: 67 GCVPLPSYNSSSDGSM 82
G VP P+Y ++ G+M
Sbjct: 66 GKVPFPNYRTTG-GNM 80
>TAIR|locus:2025182 [details] [associations]
symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
Uniprot:Q1A173
Length = 97
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 1 MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60
M + S S WT Q+K FE AL Y +D DRW +A V GK++EE+K+HY++LV+D
Sbjct: 1 MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60
Query: 61 VNRIESGCVPLPSYNSSSDGSMS 83
+ IE+G VPLP+Y + S S
Sbjct: 61 LINIETGRVPLPNYKTFESNSRS 83
>TAIR|locus:2049374 [details] [associations]
symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
Length = 101
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 2 TVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
++ GS S WT +Q+KAFE AL Y +D DRW +A V GK+ EE K+ Y+LLV D+
Sbjct: 5 SMSSYGSGS-WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 63
Query: 62 NRIESGCVPLPSYNSSSDGS 81
IE+G VP P Y +++ S
Sbjct: 64 ESIENGHVPFPDYKTTTGNS 83
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 184 (69.8 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 39/113 (34%), Positives = 68/113 (60%)
Query: 75 NSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLL 134
NS+S+ + ++ + +N + ++G K++ + ++ WT++EH FL
Sbjct: 330 NSNSNNNNNNNNNNNNNNTNNTTTTTTTATTTSGGKTNPTGKKTSLKQGWTKEEHIRFLN 389
Query: 135 GLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 187
G+ +GKG W+ I++ FV TRTPTQ+ SHAQKY++R K++R SIHD++
Sbjct: 390 GIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SIHDLS 439
>TAIR|locus:504955890 [details] [associations]
symbol:AT3G10595 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
EMBL:AC013428 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000237920 EMBL:BT015072 EMBL:BT015666 IPI:IPI00517930
RefSeq:NP_683547.2 UniGene:At.49612 ProteinModelPortal:Q9LPN9
SMR:Q9LPN9 EnsemblPlants:AT3G10595.1 GeneID:820228
KEGG:ath:AT3G10595 TAIR:At3g10595 eggNOG:NOG296411
InParanoid:Q9LPN9 OMA:KETHEWF PhylomeDB:Q9LPN9
ProtClustDB:CLSN2915149 Genevestigator:Q9LPN9 Uniprot:Q9LPN9
Length = 183
Score = 108 (43.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 102 FNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVA 161
F +E + + S Q R WT++ H FL+GLD++GK DWR I+ + ++P QV
Sbjct: 64 FPNELTKDMAQSSYQAERT--IWTKETHEWFLIGLDRFGK-DWRKIAV-LLDCKSPIQVE 119
Query: 162 SHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNXXXXXXXXXXXXXQP 221
+A+ ++ +S +++ I+D+ +V + D++ + TN +
Sbjct: 120 IYAENFYQWQSS-----KKNVINDL-NVASTDVNVMKRQGANNTNVDSTGQQESLVALEI 173
Query: 222 PQHSAGP 228
H+ P
Sbjct: 174 GHHAKAP 180
Score = 102 (41.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT E+++ F++ALV + R+E +A V +S++++K+HY+ LV+D+ + S V
Sbjct: 6 WTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGSSRVAF 64
Query: 72 PS 73
P+
Sbjct: 65 PN 66
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 110 KSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
+ + +++++ WT +EH F+ L KYG D +SIS+ +V TR PTQV +HAQKYF+
Sbjct: 161 EQEKQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFL 219
Query: 170 RLNSMNKDRRRSSIHDITSVNNG 192
R++ ++R R + S+N G
Sbjct: 220 RID---RERGRK-LESKESINGG 238
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 136 (52.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 23/68 (33%), Positives = 43/68 (63%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
W+ +EH LFL ++KYG+G+W+ IS + +R Q+ +HA+ YF +++ N + +I
Sbjct: 232 WSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKKTI 290
Query: 184 HDITSVNN 191
++ + NN
Sbjct: 291 IEVENNNN 298
Score = 64 (27.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 10 SVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYE--LLVDDVNRIESG 67
S WTKE+++ F A Y +D +KI V K++ +++ H + L + N I+S
Sbjct: 151 SSWTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQVRSHAQKFALKLEKNGIKSL 206
Query: 68 CVPLPSYNSSSDGSMSH 84
+N S S SH
Sbjct: 207 DNIDQLFNQSHAASSSH 223
>TAIR|locus:2171494 [details] [associations]
symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
Length = 96
Score = 127 (49.8 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT E++KAFE ALV P D+ + E IAA + S++EIK HY+ L+ D+ IESG +
Sbjct: 7 WTWEENKAFEVALVQVP-DSPAKLEIIAAQMR-TSVDEIKYHYDKLLQDIAVIESGRDVV 64
Query: 72 PSYNSSS 78
P Y+ S
Sbjct: 65 PEYSPRS 71
>UNIPROTKB|F1NUR7 [details] [associations]
symbol:DNAJC1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0050708 "regulation of protein
secretion" evidence=IEA] [GO:0051087 "chaperone binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0050708
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
OMA:RRQKDFD GeneTree:ENSGT00530000063419 EMBL:AADN02000601
IPI:IPI00603827 Ensembl:ENSGALT00000012853 Uniprot:F1NUR7
Length = 500
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 28/53 (52%), Positives = 34/53 (64%)
Query: 11 VWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
+WT+ Q K E AL YP+ SDRW+KIA VPGKS EE Y LLV+ V +
Sbjct: 442 LWTQNQQKLLEMALQQYPKGTSDRWDKIAKCVPGKSKEECIARYRLLVELVQK 494
>RGD|2322144 [details] [associations]
symbol:Dnajc1 "DnaJ (Hsp40) homolog, subfamily C, member 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0006457 "protein folding"
evidence=IEA;ISO] [GO:0050708 "regulation of protein secretion"
evidence=IEA;ISO] [GO:0051087 "chaperone binding" evidence=IEA;ISO]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 RGD:2322144
GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0050708 Gene3D:1.10.287.110 PRINTS:PR00625
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 IPI:IPI00363173
Ensembl:ENSRNOT00000000162 Uniprot:F1LVX1
Length = 484
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
+ WT+ Q K E AL YP+ ASDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 423 AEDAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 478
>MGI|MGI:103268 [details] [associations]
symbol:Dnajc1 "DnaJ (Hsp40) homolog, subfamily C, member 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0006417
"regulation of translation" evidence=IDA] [GO:0006457 "protein
folding" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0043022
"ribosome binding" evidence=TAS] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0050708 "regulation
of protein secretion" evidence=ISO] [GO:0051087 "chaperone binding"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
MGI:MGI:103268 GO:GO:0016021 GO:GO:0005634 GO:GO:0006457
GO:GO:0006417 GO:GO:0005789 GO:GO:0003677 GO:GO:0031965
GO:GO:0003682 GO:GO:0043022 SUPFAM:SSF46689 GO:GO:0005788
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0051087 GO:GO:0050708
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877 eggNOG:COG2214
CTD:64215 HOGENOM:HOG000231867 HOVERGEN:HBG051374 KO:K09521
OMA:RRQKDFD OrthoDB:EOG4GXFMP ChiTaRS:DNAJC1 EMBL:L16953
EMBL:BC080300 IPI:IPI00262991 PIR:JC4030 RefSeq:NP_001177746.1
RefSeq:NP_031895.1 UniGene:Mm.246674 ProteinModelPortal:Q61712
SMR:Q61712 PhosphoSite:Q61712 PaxDb:Q61712 PRIDE:Q61712
Ensembl:ENSMUST00000091418 Ensembl:ENSMUST00000166495 GeneID:13418
KEGG:mmu:13418 GeneTree:ENSGT00530000063419 InParanoid:Q61712
NextBio:283823 Bgee:Q61712 CleanEx:MM_DNAJC1 Genevestigator:Q61712
GermOnline:ENSMUSG00000026740 Uniprot:Q61712
Length = 552
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
+ WT+ Q K E AL YP+ ASDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 491 AEEAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 546
>UNIPROTKB|F1P3V8 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000085
"G2 phase of mitotic cell cycle" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0003677 GO:GO:0006260
GO:GO:0031965 GO:GO:0000085 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
GeneTree:ENSGT00530000063419 OMA:RWFEAFI EMBL:AADN02036895
IPI:IPI00571328 Ensembl:ENSGALT00000013428 Uniprot:F1P3V8
Length = 621
Score = 133 (51.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 9 SSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
SS WT E+ K E AL +YP + +RWEKIAA VPG+S ++ + Y+ LV+ V
Sbjct: 551 SSPWTTEEQKLLEQALKTYPVNTPERWEKIAAAVPGRSKKDCMKRYKELVEMV 603
>UNIPROTKB|F1MJX8 [details] [associations]
symbol:LOC781036 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005634 GO:GO:0006457 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 EMBL:DAAA02035427 EMBL:DAAA02035428
EMBL:DAAA02035429 EMBL:DAAA02035430 EMBL:DAAA02035431
EMBL:DAAA02035432 EMBL:DAAA02035433 IPI:IPI00841633
Ensembl:ENSBTAT00000047358 ArrayExpress:F1MJX8 Uniprot:F1MJX8
Length = 542
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
S WT+ Q K E AL YP +SDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 481 SEEPWTQNQQKLLELALQQYPRGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 536
>UNIPROTKB|F1MK90 [details] [associations]
symbol:LOC781036 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051087 "chaperone binding" evidence=IEA]
[GO:0050708 "regulation of protein secretion" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0050708
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 OMA:RRQKDFD
GeneTree:ENSGT00530000063419 EMBL:DAAA02035427 EMBL:DAAA02035428
EMBL:DAAA02035429 EMBL:DAAA02035430 EMBL:DAAA02035431
EMBL:DAAA02035432 EMBL:DAAA02035433 IPI:IPI01028533
Ensembl:ENSBTAT00000047536 ArrayExpress:F1MK90 Uniprot:F1MK90
Length = 544
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
S WT+ Q K E AL YP +SDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 483 SEEPWTQNQQKLLELALQQYPRGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 538
>UNIPROTKB|F1PMR9 [details] [associations]
symbol:DNAJC1 "DnaJ homolog subfamily C member 1"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634 GO:GO:0006457
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 CTD:64215 KO:K09521 OMA:RRQKDFD
GeneTree:ENSGT00530000063419 EMBL:AAEX03001199 EMBL:AAEX03001200
EMBL:AAEX03001201 EMBL:AAEX03001202 RefSeq:XP_849482.1
Ensembl:ENSCAFT00000006665 GeneID:607587 KEGG:cfa:607587
Uniprot:F1PMR9
Length = 561
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
WT+ Q K E AL YP+ +SDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 504 WTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 555
Score = 90 (36.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT+E ++V +P RWEKIA ++ G+S+ ++ + L D V SG V L
Sbjct: 333 WTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKDSVT-CSSGMVRL 390
Query: 72 PSYNSSSDGS 81
S++ S
Sbjct: 391 SELKSTAQNS 400
Score = 70 (29.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 105 ESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGD---WRSISR 149
ES+ +S + D+ R WT+ + +L L L +Y KG W I++
Sbjct: 485 ESSDEESQKKDRTRAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAK 532
>UNIPROTKB|Q96KC8 [details] [associations]
symbol:DNAJC1 "DnaJ homolog subfamily C member 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0051087 "chaperone binding" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0001671 "ATPase
activator activity" evidence=TAS] [GO:0050708 "regulation of
protein secretion" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=ISS;IDA]
[GO:0045861 "negative regulation of proteolysis" evidence=TAS]
[GO:0032781 "positive regulation of ATPase activity" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005783
GO:GO:0016021 GO:GO:0006457 GO:GO:0006417 GO:GO:0005789
GO:GO:0003677 GO:GO:0031965 GO:GO:0045861 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 EMBL:AL359697
GO:GO:0001671 GO:GO:0050708 Gene3D:1.10.287.110 PRINTS:PR00625
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
eggNOG:COG2214 EMBL:AY225122 EMBL:AK026062 EMBL:AK027263
EMBL:EF444973 EMBL:AL445431 EMBL:BC110894 IPI:IPI00074870
RefSeq:NP_071760.2 UniGene:Hs.499000 PDB:2CQQ PDB:2CQR PDBsum:2CQQ
PDBsum:2CQR ProteinModelPortal:Q96KC8 SMR:Q96KC8 IntAct:Q96KC8
MINT:MINT-1036349 STRING:Q96KC8 PhosphoSite:Q96KC8 DMDM:27805464
PaxDb:Q96KC8 PRIDE:Q96KC8 Ensembl:ENST00000376980 GeneID:64215
KEGG:hsa:64215 UCSC:uc001irc.3 CTD:64215 GeneCards:GC10M022085
HGNC:HGNC:20090 HPA:HPA013432 MIM:611207 neXtProt:NX_Q96KC8
PharmGKB:PA128394706 HOGENOM:HOG000231867 HOVERGEN:HBG051374
InParanoid:Q96KC8 KO:K09521 OMA:RRQKDFD OrthoDB:EOG4GXFMP
PhylomeDB:Q96KC8 ChiTaRS:DNAJC1 EvolutionaryTrace:Q96KC8
GenomeRNAi:64215 NextBio:66123 ArrayExpress:Q96KC8 Bgee:Q96KC8
CleanEx:HS_DNAJC1 Genevestigator:Q96KC8 GermOnline:ENSG00000136770
Uniprot:Q96KC8
Length = 554
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
WT+ Q K E AL YP +SDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQK 548
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 106 SNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQ 165
+N KS + ++ WT++EH+ FL L + + DW+ I +FV ++T Q+ SHAQ
Sbjct: 26 ANSLKSRKPYTISKQRENWTDEEHQKFLEALTLFDR-DWKKIE-SFVGSKTVIQIRSHAQ 83
Query: 166 KYFIRLNSMNKDRR 179
KYFI++ N R
Sbjct: 84 KYFIKVQKNNTGER 97
>ZFIN|ZDB-GENE-061103-529 [details] [associations]
symbol:dnajc1 "DnaJ (Hsp40) homolog, subfamily C,
member 1" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 ZFIN:ZDB-GENE-061103-529
GO:GO:0005634 GO:GO:0006457 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877
PROSITE:PS50090 HOVERGEN:HBG051374 OMA:RRQKDFD
GeneTree:ENSGT00530000063419 EMBL:CR388093 IPI:IPI00497164
UniGene:Dr.76280 SMR:B0UXV7 Ensembl:ENSDART00000079518
Uniprot:B0UXV7
Length = 526
Score = 124 (48.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 4 DEVGSSS-VWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVN 62
++ G++ VWT+ Q K E AL YP ++RW+KIA VPGK+ EE ++LL + +
Sbjct: 460 EKAGAAEDVWTQNQQKLLELALQQYPRGTTERWDKIAKVVPGKTKEECMCRFKLLAELIQ 519
Query: 63 R 63
+
Sbjct: 520 K 520
>UNIPROTKB|Q6P2Y3 [details] [associations]
symbol:dnajc2 "DnaJ homolog subfamily C member 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 GeneTree:ENSGT00530000063419
CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900 HOVERGEN:HBG008782
KO:K09522 OrthoDB:EOG4D26PN EMBL:BC064251 RefSeq:NP_001186412.1
UniGene:Str.15500 ProteinModelPortal:Q6P2Y3 STRING:Q6P2Y3
Ensembl:ENSXETT00000049978 GeneID:394933 KEGG:xtr:394933
Xenbase:XB-GENE-964533 InParanoid:Q6P2Y3 Bgee:Q6P2Y3 Uniprot:Q6P2Y3
Length = 620
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 10 SVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
S WT E+ K E AL +YP + +RWEKIA VPG+S ++ + Y+ LV+ V
Sbjct: 551 SPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMV 602
>UNIPROTKB|I3L6W6 [details] [associations]
symbol:DNAJC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051087 "chaperone binding" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 OMA:RRQKDFD GeneTree:ENSGT00530000063419
EMBL:FP476101 EMBL:CU861947 Ensembl:ENSSSCT00000030126
Uniprot:I3L6W6
Length = 542
Score = 123 (48.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
WT+ Q K E AL YP+ +S+RW+KIA VP K+ E+ Y+LLV+ V +
Sbjct: 485 WTQNQQKLLELALQQYPKGSSERWDKIAKCVPSKTKEDCIARYKLLVELVQK 536
>TAIR|locus:2163573 [details] [associations]
symbol:maMYB "membrane anchored MYB" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0048767 "root hair
elongation" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0005783 GO:GO:0005886 EMBL:CP002688
GO:GO:0003677 GO:GO:0003682 GO:GO:0048767 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017877 PROSITE:PS50090 EMBL:AF367345
EMBL:AY074839 EMBL:AK117467 IPI:IPI00546256 RefSeq:NP_568645.1
UniGene:At.25208 ProteinModelPortal:Q9ASQ2 SMR:Q9ASQ2 IntAct:Q9ASQ2
STRING:Q9ASQ2 PaxDb:Q9ASQ2 PRIDE:Q9ASQ2 EnsemblPlants:AT5G45420.1
GeneID:834578 KEGG:ath:AT5G45420 eggNOG:NOG254121 OMA:EDAGEWT
ProtClustDB:CLSN2689934 Genevestigator:Q9ASQ2 Uniprot:Q9ASQ2
Length = 309
Score = 119 (46.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 DEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKS 46
D G+ +W+ +D A NAL ++P++A+ RWEKIAA VPGKS
Sbjct: 244 DAEGTKEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKS 286
>ZFIN|ZDB-GENE-040426-1912 [details] [associations]
symbol:dnajc2 "DnaJ (Hsp40) homolog, subfamily C,
member 2" species:7955 "Danio rerio" [GO:0003682 "chromatin
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
Pfam:PF00226 ZFIN:ZDB-GENE-040426-1912 GO:GO:0005829 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 HOGENOM:HOG000006900
HOVERGEN:HBG008782 KO:K09522 EMBL:BC055125 EMBL:BC067568
IPI:IPI00505401 RefSeq:NP_997976.1 UniGene:Dr.80721
ProteinModelPortal:Q6NWJ4 Ensembl:ENSDART00000103463 GeneID:403080
KEGG:dre:403080 eggNOG:NOG297510 InParanoid:Q6NWJ4 NextBio:20816872
Bgee:Q6NWJ4 Uniprot:Q6NWJ4
Length = 618
Score = 123 (48.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 4 DEVGSSS---VWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVD 59
D VG+ S WT E+ K E AL +YP ++RWE+I+ VPG+S ++ + Y+ LV+
Sbjct: 542 DAVGADSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVE 600
>MGI|MGI:99470 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030544 "Hsp70 protein binding" evidence=ISO] [GO:0042393
"histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:2000279 "negative regulation of
DNA biosynthetic process" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 MGI:MGI:99470 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN EMBL:D63784 EMBL:AK131964 EMBL:BC052027
EMBL:U53208 IPI:IPI00126317 PIR:A57591 RefSeq:NP_033610.1
UniGene:Mm.266312 ProteinModelPortal:P54103 SMR:P54103
STRING:P54103 PhosphoSite:P54103 PaxDb:P54103 PRIDE:P54103
Ensembl:ENSMUST00000030771 GeneID:22791 KEGG:mmu:22791
UCSC:uc008woy.1 InParanoid:P54103 NextBio:303379 Bgee:P54103
CleanEx:MM_DNAJC2 Genevestigator:P54103
GermOnline:ENSMUSG00000029014 Uniprot:P54103
Length = 621
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 9 SSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
S+ WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
W+E+EH FL + YG+G WR I + + T+T Q+ SHAQK+F ++ R S+
Sbjct: 68 WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKMAQEADSRSEGSV 125
Query: 184 HDI 186
I
Sbjct: 126 KAI 128
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
W+E+EH FL + YG+G WR I + + T+T Q+ SHAQK+F ++ R S+
Sbjct: 79 WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKMAQEADSRSEGSV 136
Query: 184 HDI 186
I
Sbjct: 137 KAI 139
>UNIPROTKB|I3LNQ0 [details] [associations]
symbol:I3LNQ0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000023342
Uniprot:I3LNQ0
Length = 503
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 436 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 485
>UNIPROTKB|I3LSN5 [details] [associations]
symbol:I3LSN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000028055 OMA:HEDSTRD
Uniprot:I3LSN5
Length = 508
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 441 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 490
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
+WTE+EH FL L + + DW+ I +FV ++T Q+ SHAQKYF+++
Sbjct: 45 SWTEEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKV 91
>UNIPROTKB|Q1RMH9 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70 protein
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0006260 GO:GO:0031965 GO:GO:0000085
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 InterPro:IPR017877
GeneTree:ENSGT00530000063419 EMBL:BC114887 IPI:IPI00703453
RefSeq:NP_001068805.1 UniGene:Bt.61294 ProteinModelPortal:Q1RMH9
STRING:Q1RMH9 PRIDE:Q1RMH9 Ensembl:ENSBTAT00000004925 GeneID:507897
KEGG:bta:507897 CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900
HOVERGEN:HBG008782 InParanoid:Q1RMH9 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN NextBio:20868264 Uniprot:Q1RMH9
Length = 621
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|Q99543 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000085 "G2
phase of mitotic cell cycle" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051083 "'de
novo' cotranslational protein folding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
EMBL:X98260 EMBL:AC004668 EMBL:BC000859 EMBL:BC139751
IPI:IPI00455199 IPI:IPI00830108 RefSeq:NP_001123359.1
RefSeq:NP_055192.1 UniGene:Hs.558476 ProteinModelPortal:Q99543
SMR:Q99543 STRING:Q99543 PhosphoSite:Q99543 DMDM:296439472
PaxDb:Q99543 PRIDE:Q99543 DNASU:27000 Ensembl:ENST00000249270
Ensembl:ENST00000379263 GeneID:27000 KEGG:hsa:27000 UCSC:uc003vbo.3
UCSC:uc010lix.3 GeneCards:GC07M102952 HGNC:HGNC:13192 HPA:HPA020454
MIM:605502 neXtProt:NX_Q99543 PharmGKB:PA162383835
InParanoid:Q99543 GenomeRNAi:27000 NextBio:49486
ArrayExpress:Q99543 Bgee:Q99543 CleanEx:HS_DNAJC2
Genevestigator:Q99543 GermOnline:ENSG00000105821 GO:GO:0051083
Uniprot:Q99543
Length = 621
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|F1SB54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70
protein binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0045893 GO:GO:0003677
GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
InterPro:IPR017877 PROSITE:PS50090 GeneTree:ENSGT00530000063419
KO:K09522 EMBL:CU570825 RefSeq:XP_003130290.1
Ensembl:ENSSSCT00000016801 GeneID:100514533 KEGG:ssc:100514533
OMA:FQSWRDF Uniprot:F1SB54
Length = 621
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|Q4R8H2 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9541 "Macaca fascicularis" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 HOVERGEN:HBG008782 OrthoDB:EOG4D26PN
EMBL:AB168480 HSSP:Q96KC8 ProteinModelPortal:Q4R8H2 PRIDE:Q4R8H2
Uniprot:Q4R8H2
Length = 621
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>RGD|620524 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10116 "Rattus norvegicus" [GO:0000085 "G2 phase of mitotic
cell cycle" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006260
"DNA replication" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 RGD:620524 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OrthoDB:EOG4D26PN
HSSP:Q96KC8 EMBL:AY322161 EMBL:AY322163 EMBL:BC088838 EMBL:AF118853
IPI:IPI00358140 IPI:IPI00991289 RefSeq:NP_446228.2 UniGene:Rn.11908
ProteinModelPortal:Q7TQ20 STRING:Q7TQ20 PhosphoSite:Q7TQ20
PRIDE:Q7TQ20 Ensembl:ENSRNOT00000016909 GeneID:116456
KEGG:rno:116456 InParanoid:Q7TQ18 NextBio:618962
Genevestigator:Q7TQ20 Uniprot:Q7TQ20
Length = 621
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>UNIPROTKB|E2RS54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GeneTree:ENSGT00530000063419 OMA:RWFEAFI
EMBL:AAEX03011249 Ensembl:ENSCAFT00000006800 Uniprot:E2RS54
Length = 627
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 560 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 609
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 112 (44.5 bits), Expect = 0.00049, P = 0.00049
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
+WTE EH FL L + + DW+ I +FV ++T Q+ SHAQKYF+++
Sbjct: 50 SWTEGEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKV 96
>DICTYBASE|DDB_G0278317 [details] [associations]
symbol:mybF "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0278317 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0003677 EMBL:AAFI02000023
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 RefSeq:XP_642285.1 ProteinModelPortal:Q54YB7
EnsemblProtists:DDB0220618 GeneID:8621492 KEGG:ddi:DDB_G0278317
eggNOG:NOG304731 OMA:QSYTNNN Uniprot:Q54YB7
Length = 564
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 103 NSESNGNKSSRSDQERRKG-IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVA 161
+S+ +G+ S R ++ + G WT +E L+ + YGK +W+ I +F ++ +QV
Sbjct: 395 SSDDDGDDSGRDTKKYKPGRTVWTLEEEELYKEVFNHYGK-NWKKIKTHFP-DKSKSQVT 452
Query: 162 SHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDI 194
SH Q Y I++N + +D ++ ++ DI
Sbjct: 453 SHGQ-YLIKINKL-QDLQKVKSPPTLNITLNDI 483
Score = 54 (24.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 24/119 (20%), Positives = 49/119 (41%)
Query: 8 SSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVP-GKSLEEIKQHYELLVDDVNRIES 66
++S+ E D +Y ++A+D D G + ++Y +VN +
Sbjct: 58 NNSIINNESDNESNGTSNNYNDEANDNHHHHQDDEHHGNGNDNDNENYNN--QNVNHEKL 115
Query: 67 GCVPLPSYNSS-SDG------SMSHAGDEG--TSNGKKGGHYGHFNSESNGNKSSRSDQ 116
+ +YN++ SD + +H D T+N + + N+ SN N ++ S +
Sbjct: 116 ASIKNKNYNNNESDNESIEEINSNHNNDNNNNTNNNDNSSNNNNNNNNSNNNNNNNSKE 174
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
WTEDEH FL L YG+ W+ I + + T+T Q+ SHAQK+F +L
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72
>DICTYBASE|DDB_G0287637 [details] [associations]
symbol:mybD "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0287637 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
EMBL:AAFI02000103 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 PROSITE:PS51294 RefSeq:XP_637145.1
ProteinModelPortal:Q54K19 EnsemblProtists:DDB0220512 GeneID:8626240
KEGG:ddi:DDB_G0287637 eggNOG:NOG321969 OMA:HNNYINH
ProtClustDB:CLSZ2846665 Uniprot:Q54K19
Length = 595
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 76 SSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQE---------RRKGIAWTE 126
S+S+ + +H + +N + + N+ +N N + R ++ RK WT+
Sbjct: 386 SNSNNNNNHFNNNNNNNNNNNNNNNNNNNNNNNNNNKRKSEDDNQDDGKKKHRKNAIWTQ 445
Query: 127 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR---LNSMNKDRRR 180
+E +KYGK W++I +F +T QV SH Q Y IR L +++D R+
Sbjct: 446 EEDEKMAQLYNKYGKS-WKAIHSHFD-DKTREQVQSHGQ-YLIRIGKLEDIHRDGRK 499
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
WTE EH FL L + + DW+ I + FV ++T Q+ SHAQKYF+++
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKV 109
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 103 NSESNGNKSSRSDQERRKGI-AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVA 161
+SE + +K R K +WTE EH FL L + + DW+ I F+ ++T Q+
Sbjct: 53 SSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIR 110
Query: 162 SHAQKYFIRL 171
SHAQKYF+++
Sbjct: 111 SHAQKYFLKV 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 297 269 0.00096 114 3 11 23 0.44 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 617 (66 KB)
Total size of DFA: 213 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.76u 0.11s 27.87t Elapsed: 00:00:01
Total cpu time: 27.77u 0.11s 27.88t Elapsed: 00:00:01
Start: Tue May 21 03:58:58 2013 End: Tue May 21 03:58:59 2013