BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022439
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 141/198 (71%), Gaps = 10/198 (5%)
Query: 3 VDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVN 62
++E S++ WT ++KAFENAL + E+ +RWE++A VPGK++ ++ + Y+ L DDV+
Sbjct: 17 LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76
Query: 63 RIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSR---SDQERR 119
IE+G VP+P Y++SS ++ G K+ YG + G KSS S+QER+
Sbjct: 77 SIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQS--YG-----TGGRKSSSGRPSEQERK 129
Query: 120 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 179
KG+ WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR S KD+R
Sbjct: 130 KGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKR 189
Query: 180 RSSIHDITSVNNGDISAP 197
R+SIHDIT+VN D P
Sbjct: 190 RASIHDITTVNLSDNQTP 207
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 72/89 (80%)
Query: 100 GHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQ 159
G+ +++ S S +ER++G+ WTE+EH+LFLLGL K GKGDWR ISRNFV TRTPTQ
Sbjct: 73 GYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQ 132
Query: 160 VASHAQKYFIRLNSMNKDRRRSSIHDITS 188
VASHAQKYF+R +++N+ RRRSS+ DIT+
Sbjct: 133 VASHAQKYFLRRSNLNRRRRRSSLFDITT 161
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT +Q+KAFE AL +Y +D +RW+ +A V GK+ EE+K+HYELLV D+N IE+G VP
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73
Query: 72 PSYNSS---SDGSMSH 84
P+Y +S ++G +S
Sbjct: 74 PNYRTSGGCTNGRLSQ 89
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT++++K FE AL +Y +D DRW +A V GKS EE+++HYELL+ DVN IESG P
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71
Query: 72 PSYNSS 77
P+Y S+
Sbjct: 72 PNYRSN 77
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1
SV=1
Length = 93
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIES 66
GS W+ +++KAFE AL Y +D DRW +A V G++ EE+K+HYE+LV+D+ IES
Sbjct: 6 GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65
Query: 67 GCVPLPSYNSS 77
G VP P+Y ++
Sbjct: 66 GKVPFPNYRTT 76
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIES 66
S S WT Q+K FE AL Y +D DRW +A V GK++EE+K+HY++LV+D+ IE+
Sbjct: 7 SSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIET 66
Query: 67 GCVPLPSYNSSSDGSMS 83
G VPLP+Y + S S
Sbjct: 67 GRVPLPNYKTFESNSRS 83
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPL 71
WT +Q+KAFE AL Y +D DRW +A V GK+ EE K+ Y+LLV D+ IE+G VP
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 72 PSYNSSSDGS 81
P Y +++ S
Sbjct: 74 PDYKTTTGNS 83
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 73.2 bits (178), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 16 QDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPLPSYN 75
+DK FE AL + +D DRW+KIA V GKS EE+K+HYELL+ DVN IESG P P Y
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYR 74
Query: 76 SSS 78
+++
Sbjct: 75 NTN 77
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 15 EQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNRIESGCVPLPSY 74
+Q+K FE AL Y +D DRW+ +A V KS EE+K+HY++LV+D+ IE VPLP Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
Query: 75 NSSSDGSMSHAGDE 88
+ GS S D+
Sbjct: 75 KTVDVGSKSRGIDD 88
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
WT++EH FL G+ +GKG W+ I++ FV TRTPTQ+ SHAQKY++R K++R SI
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SI 435
Query: 184 HDIT 187
HD++
Sbjct: 436 HDLS 439
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 113 RSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLN 172
+ +++++ WT +EH F+ L KYG D +SIS+ +V TR PTQV +HAQKYF+R+
Sbjct: 164 KQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRI- 221
Query: 173 SMNKDRRR-SSIHDITSVNNG 192
DR R + S+N G
Sbjct: 222 ----DRERGRKLESKESINGG 238
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
+ WT+ Q K E AL YP+ ASDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 490 AAEEAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 546
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
WT+ Q K E AL YP +SDRW+KIA VP KS E+ Y+LLV+ V +
Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQK 548
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
WTEDEH FL L YG+ W+ I + + T+T Q+ SHAQK+F +L
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 38/182 (20%)
Query: 7 GSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYE--LLVDDVNRI 64
+ S WTKE+++ F A Y +D +KI V K++ +++ H + L + N I
Sbjct: 148 ATRSSWTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQVRSHAQKFALKLEKNGI 203
Query: 65 ESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAW 124
+S +N S S SH N S+ W
Sbjct: 204 KSLDNIDQLFNQSHAASSSH------------------NLPSHNT-------------PW 232
Query: 125 TEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIH 184
+ +EH LFL ++KYG+G+W+ IS + +R Q+ +HA+ YF +++ N + +I
Sbjct: 233 SNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKKTII 291
Query: 185 DI 186
++
Sbjct: 292 EV 293
Score = 34.7 bits (78), Expect = 0.82, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS--------- 173
+WT++E RLF+ Y K D + I + V T+T QV SHAQK+ ++L
Sbjct: 152 SWTKEEERLFVEAYKLYDK-DNKKIQEH-VKTKTILQVRSHAQKFALKLEKNGIKSLDNI 209
Query: 174 ---MNKDRRRSSIHDITSVN 190
N+ SS H++ S N
Sbjct: 210 DQLFNQSHAASSSHNLPSHN 229
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 179
WT++EH+ FL L + + DW+ I +FV ++T Q+ SHAQKYFI++ N R
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIKVQKNNTGER 97
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG+S ++ + Y+ LV+ V
Sbjct: 553 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMV 602
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 3 VDEVGSSS---VWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVD 59
D VG+ S WT E+ K E AL +YP ++RWE+I+ VPG+S ++ + Y+ LV+
Sbjct: 541 FDAVGADSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVE 600
Query: 60 DV 61
+
Sbjct: 601 MI 602
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 9 SSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
S+ WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 12 WTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDV 61
WT E+ K E AL +YP + +RWEKIA VPG++ ++ + Y+ LV+ V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
WTE+EH F+ L YG+ W+ I + V T+T Q+ SHAQK+F ++
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSKV 72
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
WTE EH FL L + + DW+ I + FV ++T Q+ SHAQKYF+++
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKV 109
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
W E+E LF GL ++G+ W I++ + TRT QV S+A++YF NK + +
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIAK-LIGTRTVLQVKSYAKQYF-----KNKPKAEPAA 154
Query: 184 HDITSVNNGDISAPQGPITGQTNG 207
++TS N +S+ Q ++ TN
Sbjct: 155 -EVTSANVTSVSSIQPHVSALTNA 177
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 50 IKQHYELLVDDVNRIESGCVPLPSYNSSSDGS------MSHAGDEGTSNGKKGGHYGHFN 103
+ HY +D R E+GC+P ++ SD + M + SN G + N
Sbjct: 30 FQDHY---LDSTWRRENGCLPWTLDSTISDENRAIIEKMLLEEEYYLSNKSLPGKFW-VN 85
Query: 104 SESNGNKSSRSDQERRKG------------IAWTEDEHRLFLLGLDKYGKGDWRSISRNF 151
+ + K + S Q+ K + WT +E LF GL K+G+ W I+
Sbjct: 86 QKEDNKKYTNSLQKSSKAMVDSPAKPASHSVKWTVEEKELFEQGLAKFGRR-WTKIA-TL 143
Query: 152 VVTRTPTQVASHAQKYF 168
+ +RT QV S+A++YF
Sbjct: 144 LKSRTVLQVKSYARQYF 160
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
WT +EH FL + ++G D+ +I++ FV TR QV +H Y K+++++
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYL-------KNQKKAE- 707
Query: 184 HDITSVNNGDISAPQG--PITGQTNGSGG 210
+ ++ +S PQ PI G S G
Sbjct: 708 ---AATSSTQVSTPQQQLPIVGTPQQSVG 733
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 122 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 168
+ WT +E LF GL KYG+ W I++ + +RT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGRR-WTKIAK-LIGSRTVLQVKSYARQYF 164
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 5 EVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDDVNR 63
E S W++ + KAFE AL YP+ +RWE+I+ ++ K+ +++ ++ L + + +
Sbjct: 350 EEKSEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMIRK 408
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 168
+ WT +E LF GL K+G+ W IS+ + +RT QV S+A++YF
Sbjct: 118 SVKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
WT E +L L ++++G G+W ++ + +RTPT+V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 76 SSSDGSMSHAGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLG 135
S+ DG ++ + D+ T N H +++ + + + WTEDE + F+ G
Sbjct: 348 STEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVKRFVKG 407
Query: 136 LDKYGKGDWR 145
L +YGK +R
Sbjct: 408 LRQYGKNFFR 417
>sp|Q54K19|MYBD_DICDI Myb-like protein D OS=Dictyostelium discoideum GN=mybD PE=3 SV=1
Length = 595
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 119 RKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 171
RK WT++E +KYGK W++I +F +T QV SH Q Y IR+
Sbjct: 438 RKNAIWTQEEDEKMAQLYNKYGKS-WKAIHSHF-DDKTREQVQSHGQ-YLIRI 487
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
WT E +L L ++++G G+W ++ + +RTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
WT E +L L ++++G G+W ++ + +RTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 85 AGDEGTSNGKKGGHYGHFNSESNGNKSSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDW 144
+G+ +N K+ Y E GN + +++ + WT + H FL +D G
Sbjct: 149 SGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVE-- 206
Query: 145 RSISRNF-----VVTRTPTQVASHAQKYFIRLNSMNKD 177
R++ + V T VASH QK+ + L ++ D
Sbjct: 207 RAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDD 244
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 169
WT E + L +++YG G+W ++ + +RTP +V H +I
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 103 NSESNGNKSSRSDQERRKGIAWTEDEHRLFL-----LGLDKYGKGDWRSISRNFVVTRTP 157
++ S N+ S ++ +R+ + WT + HR F+ LG+DK + +TR
Sbjct: 137 SASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTR-- 194
Query: 158 TQVASHAQKY 167
VASH QKY
Sbjct: 195 HNVASHLQKY 204
>sp|Q50EX6|ODO1_PETHY Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1
Length = 294
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 19 AFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHY 54
A E ++ +RW KIAA +PG++ EIK H+
Sbjct: 73 AEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHW 108
>sp|Q54QC0|MYBU_DICDI Myb-like protein U OS=Dictyostelium discoideum GN=mybU PE=4 SV=1
Length = 2381
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 116 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQV 160
Q+ + W E+E LF YG+ DW+ +S T++PTQ+
Sbjct: 848 QKHFQPTIWHEEEKLLFRELFCAYGR-DWQMVSTLMCGTKSPTQI 891
>sp|Q9P2K3|RCOR3_HUMAN REST corepressor 3 OS=Homo sapiens GN=RCOR3 PE=1 SV=2
Length = 495
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 124 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 183
WT +E L + G+ KYGK D+++I+ + + +T QV + Y R N + + +
Sbjct: 290 WTTEEQLLAVQGVRKYGK-DFQAIA-DVIGNKTVGQVKNFFVNYRRRFN-LEEVLQEWEA 346
Query: 184 HDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSS 218
T +NGD S G+ S SGKS+
Sbjct: 347 EQGTQASNGDAST-----LGEETKSASNVPSGKST 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,268,802
Number of Sequences: 539616
Number of extensions: 6542370
Number of successful extensions: 28652
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 666
Number of HSP's that attempted gapping in prelim test: 25808
Number of HSP's gapped (non-prelim): 3159
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)