Query 022451
Match_columns 297
No_of_seqs 241 out of 2588
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 05:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 2.2E-54 7.6E-59 393.5 20.6 262 28-295 10-273 (294)
2 3adn_A Spermidine synthase; am 100.0 1.2E-44 4E-49 331.7 19.1 261 28-295 10-273 (294)
3 1iy9_A Spermidine synthase; ro 100.0 1.7E-43 5.7E-48 321.2 25.8 256 29-295 2-258 (275)
4 3c6k_A Spermine synthase; sper 100.0 5.8E-44 2E-48 334.0 20.7 240 22-268 125-379 (381)
5 2i7c_A Spermidine synthase; tr 100.0 4.9E-42 1.7E-46 312.7 25.9 258 29-295 3-264 (283)
6 1mjf_A Spermidine synthase; sp 100.0 4.1E-41 1.4E-45 306.2 24.5 256 29-297 2-264 (281)
7 2o07_A Spermidine synthase; st 100.0 2.2E-41 7.7E-46 311.4 22.0 267 22-295 13-284 (304)
8 2b2c_A Spermidine synthase; be 100.0 4E-41 1.4E-45 310.9 22.8 253 36-295 42-297 (314)
9 1inl_A Spermidine synthase; be 100.0 8.2E-41 2.8E-45 306.5 24.1 238 27-268 14-253 (296)
10 1uir_A Polyamine aminopropyltr 100.0 6.2E-41 2.1E-45 309.7 22.6 238 28-268 3-243 (314)
11 2pt6_A Spermidine synthase; tr 100.0 9.4E-40 3.2E-44 302.7 24.8 238 27-269 39-279 (321)
12 3bwc_A Spermidine synthase; SA 100.0 3.6E-39 1.2E-43 296.5 24.5 263 25-295 13-285 (304)
13 2qfm_A Spermine synthase; sper 100.0 2.3E-39 7.8E-44 301.9 22.4 223 38-268 126-362 (364)
14 1xj5_A Spermidine synthase 1; 100.0 9.9E-39 3.4E-43 297.2 26.5 263 27-295 43-313 (334)
15 2cmg_A Spermidine synthase; tr 100.0 8E-40 2.7E-44 295.0 17.2 240 30-295 1-240 (262)
16 3gjy_A Spermidine synthase; AP 100.0 1.4E-32 4.8E-37 253.1 20.8 207 55-271 29-251 (317)
17 3tfw_A Putative O-methyltransf 99.6 2.4E-14 8.3E-19 126.9 16.5 106 101-219 62-170 (248)
18 1sui_A Caffeoyl-COA O-methyltr 99.6 2E-14 6.9E-19 127.6 14.3 105 101-218 78-189 (247)
19 3ntv_A MW1564 protein; rossman 99.6 3.1E-14 1.1E-18 124.8 15.0 105 101-218 70-175 (232)
20 3c3p_A Methyltransferase; NP_9 99.6 2.5E-14 8.5E-19 123.1 14.1 150 101-267 55-209 (210)
21 3p9n_A Possible methyltransfer 99.6 6.3E-14 2.2E-18 118.6 15.5 109 101-220 43-154 (189)
22 3dr5_A Putative O-methyltransf 99.6 6.6E-14 2.3E-18 122.3 15.9 104 104-219 58-163 (221)
23 3c3y_A Pfomt, O-methyltransfer 99.6 3E-14 1E-18 125.5 13.0 151 101-267 69-236 (237)
24 3orh_A Guanidinoacetate N-meth 99.5 1.6E-14 5.6E-19 127.2 10.2 122 85-218 46-169 (236)
25 3duw_A OMT, O-methyltransferas 99.5 1.2E-13 4.2E-18 119.5 15.2 106 101-219 57-167 (223)
26 3u81_A Catechol O-methyltransf 99.5 1.7E-13 6E-18 118.9 14.8 108 101-219 57-170 (221)
27 1xdz_A Methyltransferase GIDB; 99.5 2.7E-13 9.2E-18 119.2 15.5 149 101-268 69-220 (240)
28 2ozv_A Hypothetical protein AT 99.5 1.4E-13 4.9E-18 122.9 13.7 138 100-248 34-192 (260)
29 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5.3E-18 119.7 13.4 128 102-240 34-165 (218)
30 1dus_A MJ0882; hypothetical pr 99.5 6.9E-13 2.3E-17 111.1 16.9 131 100-248 50-180 (194)
31 3r3h_A O-methyltransferase, SA 99.5 6.9E-14 2.4E-18 123.8 11.0 105 101-218 59-169 (242)
32 3tr6_A O-methyltransferase; ce 99.5 2.6E-13 8.9E-18 117.5 14.5 106 101-219 63-174 (225)
33 4dzr_A Protein-(glutamine-N5) 99.5 9.1E-14 3.1E-18 118.6 10.9 154 101-268 29-206 (215)
34 3cbg_A O-methyltransferase; cy 99.5 4E-13 1.4E-17 117.8 14.6 150 101-266 71-231 (232)
35 3g89_A Ribosomal RNA small sub 99.5 8.2E-13 2.8E-17 117.4 16.7 148 101-267 79-229 (249)
36 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.3E-13 1.5E-17 115.7 14.4 130 101-241 40-172 (214)
37 3hm2_A Precorrin-6Y C5,15-meth 99.5 8.8E-13 3E-17 109.5 15.5 124 100-244 23-146 (178)
38 3fpf_A Mtnas, putative unchara 99.5 1.2E-13 4.1E-18 125.6 10.5 150 98-270 118-267 (298)
39 2avd_A Catechol-O-methyltransf 99.5 5.7E-13 2E-17 115.6 14.3 105 101-218 68-178 (229)
40 2fca_A TRNA (guanine-N(7)-)-me 99.5 8.9E-13 3.1E-17 114.1 14.6 130 101-241 37-169 (213)
41 3e05_A Precorrin-6Y C5,15-meth 99.5 1.6E-12 5.4E-17 111.1 16.0 122 99-241 37-158 (204)
42 2hnk_A SAM-dependent O-methylt 99.5 7.1E-13 2.4E-17 116.3 13.9 106 101-219 59-181 (239)
43 3evz_A Methyltransferase; NYSG 99.5 1.1E-12 3.8E-17 113.9 14.7 135 100-246 53-201 (230)
44 2b3t_A Protein methyltransfera 99.5 3.9E-12 1.3E-16 114.2 18.6 175 69-265 79-274 (276)
45 4gek_A TRNA (CMO5U34)-methyltr 99.5 4.3E-13 1.5E-17 120.1 12.1 109 100-219 68-178 (261)
46 2esr_A Methyltransferase; stru 99.4 2.6E-13 9E-18 113.2 9.9 108 101-220 30-139 (177)
47 3mb5_A SAM-dependent methyltra 99.4 5.4E-13 1.8E-17 117.8 11.9 127 99-248 90-220 (255)
48 3lpm_A Putative methyltransfer 99.4 2E-12 6.9E-17 115.0 15.7 131 99-241 45-191 (259)
49 2fhp_A Methylase, putative; al 99.4 4.1E-13 1.4E-17 112.4 10.5 108 101-220 43-155 (187)
50 1jsx_A Glucose-inhibited divis 99.4 1.2E-12 4.1E-17 111.7 12.9 141 102-267 65-205 (207)
51 2fpo_A Methylase YHHF; structu 99.4 6.4E-13 2.2E-17 114.1 10.9 106 102-220 54-161 (202)
52 2igt_A SAM dependent methyltra 99.4 2.4E-12 8.1E-17 119.3 15.4 113 101-219 152-272 (332)
53 2ift_A Putative methylase HI07 99.4 6E-13 2.1E-17 114.1 10.4 108 102-220 53-164 (201)
54 3ckk_A TRNA (guanine-N(7)-)-me 99.4 9.9E-13 3.4E-17 115.9 12.1 133 101-240 45-183 (235)
55 3mti_A RRNA methylase; SAM-dep 99.4 2.3E-12 8E-17 108.1 13.8 112 101-219 21-135 (185)
56 3eey_A Putative rRNA methylase 99.4 4E-12 1.4E-16 107.7 15.2 115 101-219 21-139 (197)
57 1ws6_A Methyltransferase; stru 99.4 8.5E-13 2.9E-17 108.7 10.5 104 102-221 41-149 (171)
58 2frn_A Hypothetical protein PH 99.4 3E-13 1E-17 122.0 8.3 130 101-247 124-253 (278)
59 3grz_A L11 mtase, ribosomal pr 99.4 2.8E-12 9.4E-17 109.5 13.7 140 100-269 58-198 (205)
60 3njr_A Precorrin-6Y methylase; 99.4 7E-12 2.4E-16 107.8 16.3 119 100-242 53-171 (204)
61 4hg2_A Methyltransferase type 99.4 3.3E-13 1.1E-17 120.7 8.0 100 100-220 37-136 (257)
62 1zx0_A Guanidinoacetate N-meth 99.4 9.7E-13 3.3E-17 115.2 10.7 109 101-218 59-169 (236)
63 3jwg_A HEN1, methyltransferase 99.4 1.3E-11 4.4E-16 106.3 16.2 109 101-218 28-140 (219)
64 2gpy_A O-methyltransferase; st 99.4 1.2E-12 4E-17 114.3 9.7 106 101-219 53-160 (233)
65 1nv8_A HEMK protein; class I a 99.4 8.7E-12 3E-16 112.9 15.0 142 69-220 92-250 (284)
66 3dlc_A Putative S-adenosyl-L-m 99.4 3.1E-12 1.1E-16 109.2 11.5 107 101-219 42-148 (219)
67 2b78_A Hypothetical protein SM 99.4 1.2E-11 4E-16 116.8 16.2 118 101-222 211-334 (385)
68 1l3i_A Precorrin-6Y methyltran 99.4 2.4E-11 8.2E-16 101.4 16.5 125 99-246 30-155 (192)
69 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.9E-12 1.3E-16 112.2 12.2 118 101-219 48-173 (246)
70 3ofk_A Nodulation protein S; N 99.4 1E-11 3.5E-16 106.6 14.3 135 100-248 49-186 (216)
71 3kkz_A Uncharacterized protein 99.4 3.4E-12 1.2E-16 113.5 11.2 106 101-219 45-150 (267)
72 4dcm_A Ribosomal RNA large sub 99.3 4.9E-12 1.7E-16 119.0 12.2 134 101-248 221-354 (375)
73 3f4k_A Putative methyltransfer 99.3 4.4E-12 1.5E-16 111.7 11.1 106 101-219 45-150 (257)
74 3dtn_A Putative methyltransfer 99.3 2.2E-12 7.7E-17 112.1 8.9 106 101-219 43-148 (234)
75 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.9E-12 2E-16 110.9 11.7 124 100-246 94-220 (258)
76 3jwh_A HEN1; methyltransferase 99.3 8.6E-12 2.9E-16 107.4 12.3 112 101-218 28-140 (217)
77 3hem_A Cyclopropane-fatty-acyl 99.3 5.7E-12 1.9E-16 114.3 11.6 111 100-219 70-183 (302)
78 1fbn_A MJ fibrillarin homologu 99.3 2.4E-11 8.1E-16 106.0 14.9 103 101-218 73-177 (230)
79 1g8a_A Fibrillarin-like PRE-rR 99.3 1.7E-11 5.9E-16 106.3 13.9 104 101-219 72-178 (227)
80 4htf_A S-adenosylmethionine-de 99.3 6.2E-12 2.1E-16 112.9 11.3 107 101-219 67-173 (285)
81 1o54_A SAM-dependent O-methylt 99.3 5E-12 1.7E-16 113.4 10.6 124 100-246 110-235 (277)
82 1yb2_A Hypothetical protein TA 99.3 5.6E-12 1.9E-16 113.1 11.0 125 100-248 108-235 (275)
83 3e8s_A Putative SAM dependent 99.3 1.8E-11 6.1E-16 105.1 13.6 100 101-220 51-153 (227)
84 3dmg_A Probable ribosomal RNA 99.3 5.8E-12 2E-16 118.7 11.4 145 101-270 232-376 (381)
85 1nt2_A Fibrillarin-like PRE-rR 99.3 1.9E-11 6.5E-16 105.8 13.5 104 101-219 56-161 (210)
86 1nkv_A Hypothetical protein YJ 99.3 5.2E-12 1.8E-16 111.1 10.0 107 100-219 34-140 (256)
87 2yxd_A Probable cobalt-precorr 99.3 1.1E-10 3.8E-15 96.7 17.5 120 100-246 33-152 (183)
88 3ajd_A Putative methyltransfer 99.3 1.5E-11 5.2E-16 110.5 13.1 139 99-246 80-234 (274)
89 2yvl_A TRMI protein, hypotheti 99.3 1.2E-11 4.1E-16 108.3 11.9 124 101-248 90-213 (248)
90 3dh0_A SAM dependent methyltra 99.3 7.6E-12 2.6E-16 107.5 10.3 152 100-268 35-194 (219)
91 1ve3_A Hypothetical protein PH 99.3 5.3E-12 1.8E-16 108.8 9.1 106 101-219 37-142 (227)
92 2b25_A Hypothetical protein; s 99.3 1.4E-11 4.7E-16 113.7 12.2 123 100-240 103-234 (336)
93 3v97_A Ribosomal RNA large sub 99.3 1.7E-11 5.8E-16 124.0 13.9 117 101-221 538-659 (703)
94 3a27_A TYW2, uncharacterized p 99.3 5.5E-12 1.9E-16 113.4 9.2 126 100-243 117-242 (272)
95 2qm3_A Predicted methyltransfe 99.3 6.3E-12 2.2E-16 118.0 9.9 105 102-219 172-278 (373)
96 1vl5_A Unknown conserved prote 99.3 6.1E-12 2.1E-16 111.3 9.3 105 100-218 35-139 (260)
97 3k6r_A Putative transferase PH 99.3 4.8E-12 1.6E-16 114.3 8.6 146 100-262 123-270 (278)
98 2nxc_A L11 mtase, ribosomal pr 99.3 3.3E-11 1.1E-15 107.1 13.9 120 101-245 119-239 (254)
99 2qy6_A UPF0209 protein YFCK; s 99.3 1.6E-11 5.3E-16 109.8 11.5 150 101-269 59-249 (257)
100 1i9g_A Hypothetical protein RV 99.3 1.4E-11 4.9E-16 110.1 11.3 127 100-247 97-227 (280)
101 3g5t_A Trans-aconitate 3-methy 99.3 1.1E-11 3.7E-16 112.3 10.3 108 101-218 35-148 (299)
102 1wxx_A TT1595, hypothetical pr 99.3 3.9E-11 1.3E-15 112.9 14.4 112 102-222 209-328 (382)
103 3mgg_A Methyltransferase; NYSG 99.3 5.9E-12 2E-16 112.2 8.3 107 101-219 36-142 (276)
104 4dmg_A Putative uncharacterize 99.3 8.3E-11 2.8E-15 111.2 16.4 112 101-222 213-329 (393)
105 3lbf_A Protein-L-isoaspartate 99.3 1.3E-11 4.5E-16 105.6 9.9 101 100-220 75-175 (210)
106 3c0k_A UPF0064 protein YCCW; P 99.3 7.2E-11 2.5E-15 111.5 15.8 118 101-222 219-342 (396)
107 2p35_A Trans-aconitate 2-methy 99.3 5E-12 1.7E-16 111.3 7.2 101 101-219 32-132 (259)
108 3hnr_A Probable methyltransfer 99.3 3.3E-11 1.1E-15 103.6 12.0 102 101-219 44-145 (220)
109 1ej0_A FTSJ; methyltransferase 99.3 1.5E-11 5.2E-16 100.9 9.3 144 101-266 21-177 (180)
110 3gu3_A Methyltransferase; alph 99.3 7.8E-12 2.7E-16 112.5 8.2 106 100-219 20-126 (284)
111 2bm8_A Cephalosporin hydroxyla 99.3 4.8E-12 1.7E-16 111.4 6.6 99 102-219 81-187 (236)
112 2gb4_A Thiopurine S-methyltran 99.3 1.5E-11 5E-16 109.6 9.7 110 101-217 67-189 (252)
113 3g07_A 7SK snRNA methylphospha 99.3 1E-11 3.4E-16 112.6 8.7 117 102-219 46-220 (292)
114 1xxl_A YCGJ protein; structura 99.3 4.1E-11 1.4E-15 104.9 12.3 107 99-219 18-124 (239)
115 1pjz_A Thiopurine S-methyltran 99.3 5.5E-12 1.9E-16 108.3 6.5 108 100-214 20-135 (203)
116 4df3_A Fibrillarin-like rRNA/T 99.3 9.1E-11 3.1E-15 103.3 14.5 148 100-264 75-229 (233)
117 3e23_A Uncharacterized protein 99.3 4.2E-11 1.5E-15 102.4 12.1 150 101-269 42-204 (211)
118 2p7i_A Hypothetical protein; p 99.3 1.2E-11 3.9E-16 107.7 8.6 100 101-219 41-141 (250)
119 3m6w_A RRNA methylase; rRNA me 99.3 5.8E-11 2E-15 114.4 14.2 135 99-244 98-250 (464)
120 3bus_A REBM, methyltransferase 99.3 2.7E-11 9.1E-16 107.7 11.0 108 100-219 59-166 (273)
121 2xvm_A Tellurite resistance pr 99.2 3.1E-11 1E-15 101.8 10.2 106 100-218 30-135 (199)
122 2as0_A Hypothetical protein PH 99.2 5.4E-11 1.9E-15 112.3 13.0 115 101-222 216-338 (396)
123 3id6_C Fibrillarin-like rRNA/T 99.2 1.1E-10 3.7E-15 102.8 13.6 150 100-266 74-230 (232)
124 3g5l_A Putative S-adenosylmeth 99.2 1.7E-11 5.6E-16 108.0 8.3 103 101-219 43-145 (253)
125 1ixk_A Methyltransferase; open 99.2 7.8E-11 2.7E-15 108.1 13.1 117 99-221 115-248 (315)
126 3h2b_A SAM-dependent methyltra 99.2 2.7E-11 9.1E-16 103.0 9.3 100 103-219 42-141 (203)
127 3dou_A Ribosomal RNA large sub 99.2 2.9E-11 9.9E-16 103.1 9.2 142 101-267 24-181 (191)
128 3ujc_A Phosphoethanolamine N-m 99.2 9.3E-12 3.2E-16 109.7 6.3 106 101-219 54-159 (266)
129 3ou2_A SAM-dependent methyltra 99.2 2.9E-11 9.8E-16 103.4 9.2 103 100-219 44-146 (218)
130 3kr9_A SAM-dependent methyltra 99.2 3.5E-11 1.2E-15 105.4 9.8 120 101-241 14-133 (225)
131 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.6E-11 5.6E-16 107.1 7.7 104 101-219 76-182 (233)
132 3pfg_A N-methyltransferase; N, 99.2 3.9E-11 1.3E-15 106.2 10.0 102 100-218 48-150 (263)
133 3ocj_A Putative exported prote 99.2 1.2E-11 4E-16 112.5 6.6 111 100-219 116-227 (305)
134 2ex4_A Adrenal gland protein A 99.2 1.4E-11 4.9E-16 107.8 6.9 107 102-219 79-185 (241)
135 3lcc_A Putative methyl chlorid 99.2 2.6E-11 9E-16 105.6 8.5 133 102-246 66-203 (235)
136 1kpg_A CFA synthase;, cyclopro 99.2 4E-11 1.4E-15 107.5 9.9 106 101-219 63-168 (287)
137 3m70_A Tellurite resistance pr 99.2 3.7E-11 1.3E-15 107.8 9.2 104 101-218 119-222 (286)
138 3dli_A Methyltransferase; PSI- 99.2 3.7E-11 1.3E-15 105.1 8.9 101 101-220 40-141 (240)
139 3m4x_A NOL1/NOP2/SUN family pr 99.2 8.6E-11 2.9E-15 113.1 12.2 118 99-221 102-236 (456)
140 3m33_A Uncharacterized protein 99.2 2.1E-11 7.2E-16 106.0 7.3 92 101-216 47-139 (226)
141 3tma_A Methyltransferase; thum 99.2 5.4E-11 1.9E-15 110.6 10.5 114 100-219 201-317 (354)
142 4fsd_A Arsenic methyltransfera 99.2 2.6E-11 8.9E-16 114.1 8.2 112 101-219 82-203 (383)
143 2plw_A Ribosomal RNA methyltra 99.2 4.5E-11 1.5E-15 101.4 8.9 145 101-267 21-196 (201)
144 2pxx_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 102.3 8.5 110 101-219 41-159 (215)
145 3bkw_A MLL3908 protein, S-aden 99.2 5.7E-11 1.9E-15 103.4 9.7 103 101-219 42-144 (243)
146 3l8d_A Methyltransferase; stru 99.2 6.8E-11 2.3E-15 102.9 10.2 102 101-219 52-153 (242)
147 2yqz_A Hypothetical protein TT 99.2 4.6E-11 1.6E-15 105.2 9.2 104 101-219 38-141 (263)
148 3ccf_A Cyclopropane-fatty-acyl 99.2 5.9E-11 2E-15 106.2 10.0 101 100-220 55-155 (279)
149 3gdh_A Trimethylguanosine synt 99.2 5.4E-11 1.8E-15 104.0 9.5 104 101-218 77-180 (241)
150 3i9f_A Putative type 11 methyl 99.2 3.2E-11 1.1E-15 99.6 7.3 97 101-219 16-112 (170)
151 1sqg_A SUN protein, FMU protei 99.2 3.2E-10 1.1E-14 108.3 15.1 117 99-221 243-376 (429)
152 3q87_B N6 adenine specific DNA 99.2 6E-10 2.1E-14 92.7 14.9 121 101-247 22-146 (170)
153 3vc1_A Geranyl diphosphate 2-C 99.2 5.2E-11 1.8E-15 108.5 9.1 106 101-219 116-221 (312)
154 2o57_A Putative sarcosine dime 99.2 3.7E-11 1.3E-15 108.3 7.9 108 100-219 80-187 (297)
155 2pjd_A Ribosomal RNA small sub 99.2 3.1E-11 1.1E-15 111.9 7.5 108 101-219 195-303 (343)
156 1dl5_A Protein-L-isoaspartate 99.2 6.5E-11 2.2E-15 108.5 9.5 103 100-220 73-176 (317)
157 1o9g_A RRNA methyltransferase; 99.2 9.8E-12 3.3E-16 109.7 3.7 113 102-218 51-213 (250)
158 3lec_A NADB-rossmann superfami 99.2 6.8E-11 2.3E-15 103.9 9.1 120 101-241 20-139 (230)
159 2yx1_A Hypothetical protein MJ 99.2 4.7E-11 1.6E-15 110.5 8.5 114 101-242 194-307 (336)
160 3q7e_A Protein arginine N-meth 99.2 6.5E-11 2.2E-15 110.1 9.5 108 101-218 65-172 (349)
161 2fk8_A Methoxy mycolic acid sy 99.2 1.3E-10 4.6E-15 105.8 11.4 106 101-219 89-194 (318)
162 3g2m_A PCZA361.24; SAM-depende 99.2 3.7E-11 1.3E-15 108.7 7.6 110 101-220 81-191 (299)
163 3r0q_C Probable protein argini 99.2 8.1E-11 2.8E-15 110.6 10.1 107 101-218 62-168 (376)
164 1xtp_A LMAJ004091AAA; SGPP, st 99.2 5.9E-11 2E-15 104.1 8.4 106 101-219 92-197 (254)
165 3thr_A Glycine N-methyltransfe 99.2 6E-11 2E-15 106.6 8.7 116 101-219 56-175 (293)
166 3cgg_A SAM-dependent methyltra 99.2 2.8E-10 9.6E-15 95.1 12.1 127 100-247 44-172 (195)
167 2dul_A N(2),N(2)-dimethylguano 99.2 8.4E-11 2.9E-15 110.7 9.8 105 102-219 47-164 (378)
168 2yxe_A Protein-L-isoaspartate 99.2 1.2E-10 4E-15 100.0 9.8 103 100-220 75-178 (215)
169 3ggd_A SAM-dependent methyltra 99.2 7.7E-11 2.6E-15 103.1 8.8 105 101-219 55-163 (245)
170 2kw5_A SLR1183 protein; struct 99.2 6.7E-11 2.3E-15 100.4 8.1 100 105-219 32-131 (202)
171 3gnl_A Uncharacterized protein 99.2 9.2E-11 3.1E-15 103.9 9.2 122 101-243 20-142 (244)
172 3p2e_A 16S rRNA methylase; met 99.1 1.9E-11 6.5E-16 106.9 4.6 111 101-217 23-137 (225)
173 1r18_A Protein-L-isoaspartate( 99.1 6.5E-11 2.2E-15 102.8 8.0 107 101-221 83-196 (227)
174 1y8c_A S-adenosylmethionine-de 99.1 8.8E-11 3E-15 102.1 8.8 106 101-219 36-142 (246)
175 1wy7_A Hypothetical protein PH 99.1 1.9E-09 6.4E-14 91.8 17.0 118 101-241 48-165 (207)
176 3sm3_A SAM-dependent methyltra 99.1 1.4E-10 4.8E-15 100.1 10.0 112 101-219 29-141 (235)
177 2pbf_A Protein-L-isoaspartate 99.1 1.5E-10 5E-15 100.3 10.0 106 101-219 79-193 (227)
178 1ri5_A MRNA capping enzyme; me 99.1 4.7E-11 1.6E-15 107.1 7.1 113 100-219 62-174 (298)
179 3d2l_A SAM-dependent methyltra 99.1 7.6E-11 2.6E-15 102.6 8.2 105 101-219 32-137 (243)
180 3axs_A Probable N(2),N(2)-dime 99.1 8.1E-11 2.8E-15 111.2 8.8 104 102-219 52-158 (392)
181 2fyt_A Protein arginine N-meth 99.1 1.6E-10 5.5E-15 107.1 10.6 106 101-216 63-168 (340)
182 4hc4_A Protein arginine N-meth 99.1 1.2E-10 4.2E-15 109.3 9.9 105 102-217 83-187 (376)
183 2h00_A Methyltransferase 10 do 99.1 3.3E-11 1.1E-15 106.4 5.6 80 102-184 65-149 (254)
184 2p8j_A S-adenosylmethionine-de 99.1 8.6E-11 2.9E-15 100.0 8.0 108 100-219 21-128 (209)
185 1ne2_A Hypothetical protein TA 99.1 7.7E-10 2.6E-14 93.9 13.8 97 100-217 49-145 (200)
186 2yxl_A PH0851 protein, 450AA l 99.1 2.9E-10 9.8E-15 109.3 12.4 118 99-221 256-391 (450)
187 1wzn_A SAM-dependent methyltra 99.1 9.8E-11 3.3E-15 102.8 8.0 106 101-219 40-145 (252)
188 2nyu_A Putative ribosomal RNA 99.1 2.1E-10 7.3E-15 96.7 9.7 123 101-248 21-168 (196)
189 3bxo_A N,N-dimethyltransferase 99.1 2.1E-10 7.3E-15 99.4 10.0 102 101-219 39-141 (239)
190 1vbf_A 231AA long hypothetical 99.1 2.5E-10 8.4E-15 99.0 10.4 99 100-220 68-166 (231)
191 2gs9_A Hypothetical protein TT 99.1 1.6E-10 5.6E-15 98.7 9.1 98 101-219 35-132 (211)
192 1i1n_A Protein-L-isoaspartate 99.1 3.8E-10 1.3E-14 97.6 11.4 106 101-220 76-183 (226)
193 2y1w_A Histone-arginine methyl 99.1 3.5E-10 1.2E-14 105.1 11.9 106 101-218 49-154 (348)
194 3mq2_A 16S rRNA methyltransfer 99.1 1.3E-10 4.5E-15 100.0 8.3 110 101-219 26-140 (218)
195 2frx_A Hypothetical protein YE 99.1 4.8E-10 1.6E-14 108.6 13.1 115 102-221 117-248 (479)
196 3fzg_A 16S rRNA methylase; met 99.1 8.4E-11 2.9E-15 100.2 6.8 104 101-218 48-151 (200)
197 3bgv_A MRNA CAP guanine-N7 met 99.1 6.4E-11 2.2E-15 107.9 6.3 114 101-219 33-155 (313)
198 2vdw_A Vaccinia virus capping 99.1 1.7E-10 5.8E-15 105.3 8.9 114 101-219 47-169 (302)
199 1jg1_A PIMT;, protein-L-isoasp 99.1 2.6E-10 8.9E-15 99.6 9.7 103 100-221 89-191 (235)
200 1g6q_1 HnRNP arginine N-methyl 99.1 4.3E-10 1.5E-14 103.6 11.3 107 101-217 37-143 (328)
201 2qe6_A Uncharacterized protein 99.1 4.6E-10 1.6E-14 100.9 11.2 108 102-220 77-197 (274)
202 2aot_A HMT, histamine N-methyl 99.1 2.1E-10 7.1E-15 103.5 8.5 108 102-219 52-172 (292)
203 1u2z_A Histone-lysine N-methyl 99.1 2.9E-10 9.9E-15 108.6 9.5 109 100-218 240-358 (433)
204 3ege_A Putative methyltransfer 99.1 1.5E-10 5.1E-15 102.7 6.8 99 100-219 32-130 (261)
205 3cc8_A Putative methyltransfer 99.1 3.1E-10 1.1E-14 97.4 8.0 99 101-219 31-130 (230)
206 3uwp_A Histone-lysine N-methyl 99.0 1.1E-09 3.7E-14 103.6 11.7 113 99-219 170-288 (438)
207 3dp7_A SAM-dependent methyltra 99.0 4.2E-10 1.4E-14 105.0 8.7 110 101-219 178-287 (363)
208 2avn_A Ubiquinone/menaquinone 99.0 6.1E-10 2.1E-14 98.6 8.7 99 101-219 53-152 (260)
209 1p91_A Ribosomal RNA large sub 99.0 3.2E-10 1.1E-14 100.7 6.8 95 101-219 84-178 (269)
210 2jjq_A Uncharacterized RNA met 99.0 1.3E-09 4.5E-14 104.0 11.4 99 101-219 289-387 (425)
211 3gwz_A MMCR; methyltransferase 99.0 1.7E-09 5.7E-14 101.1 11.5 107 101-219 201-307 (369)
212 3i53_A O-methyltransferase; CO 99.0 8.2E-10 2.8E-14 101.4 9.2 106 102-219 169-274 (332)
213 3iv6_A Putative Zn-dependent a 99.0 1.7E-09 5.7E-14 96.8 10.6 106 100-220 43-149 (261)
214 2i62_A Nicotinamide N-methyltr 99.0 1E-10 3.6E-15 103.0 2.5 115 101-219 55-198 (265)
215 3tm4_A TRNA (guanine N2-)-meth 99.0 3E-09 1E-13 99.7 12.6 104 100-209 215-321 (373)
216 3bkx_A SAM-dependent methyltra 99.0 9.1E-10 3.1E-14 97.8 8.3 110 100-219 41-159 (275)
217 3mcz_A O-methyltransferase; ad 99.0 6.4E-10 2.2E-14 102.8 7.6 108 103-219 180-287 (352)
218 1qzz_A RDMB, aclacinomycin-10- 99.0 1.1E-09 3.7E-14 102.0 9.2 107 101-219 181-287 (374)
219 3bt7_A TRNA (uracil-5-)-methyl 99.0 2.8E-08 9.4E-13 93.0 18.5 101 102-221 213-328 (369)
220 3b3j_A Histone-arginine methyl 99.0 8.3E-10 2.8E-14 107.0 8.2 107 101-219 157-263 (480)
221 1x19_A CRTF-related protein; m 99.0 3.2E-09 1.1E-13 98.6 11.6 108 100-219 188-295 (359)
222 2wa2_A Non-structural protein 99.0 2.7E-10 9.1E-15 102.8 4.0 155 101-274 81-243 (276)
223 3sso_A Methyltransferase; macr 99.0 5.1E-10 1.7E-14 105.5 6.0 98 101-219 215-324 (419)
224 3hp7_A Hemolysin, putative; st 99.0 2E-09 6.7E-14 97.8 9.5 125 71-218 55-184 (291)
225 2r3s_A Uncharacterized protein 98.9 9.4E-10 3.2E-14 100.7 7.0 108 101-219 164-271 (335)
226 1uwv_A 23S rRNA (uracil-5-)-me 98.9 1.3E-08 4.5E-13 97.2 15.2 102 101-219 285-389 (433)
227 3cvo_A Methyltransferase-like 98.9 2.5E-09 8.6E-14 92.0 9.1 101 102-218 30-153 (202)
228 2b9e_A NOL1/NOP2/SUN domain fa 98.9 1.4E-08 4.8E-13 92.9 14.7 117 99-221 99-236 (309)
229 3htx_A HEN1; HEN1, small RNA m 98.9 3.5E-09 1.2E-13 107.3 11.6 108 101-218 720-833 (950)
230 2a14_A Indolethylamine N-methy 98.9 1.1E-10 3.7E-15 104.0 0.4 114 101-219 54-197 (263)
231 1tw3_A COMT, carminomycin 4-O- 98.9 1.9E-09 6.4E-14 99.9 8.7 107 101-219 182-288 (360)
232 3bzb_A Uncharacterized protein 98.9 2.4E-09 8.3E-14 96.4 9.0 110 101-219 78-205 (281)
233 2f8l_A Hypothetical protein LM 98.9 1.4E-09 4.6E-14 100.8 7.5 131 102-242 130-277 (344)
234 2oxt_A Nucleoside-2'-O-methylt 98.9 4.7E-10 1.6E-14 100.6 4.1 152 101-270 73-231 (265)
235 2ip2_A Probable phenazine-spec 98.9 1.4E-09 4.6E-14 99.9 7.2 104 104-219 169-272 (334)
236 1vlm_A SAM-dependent methyltra 98.9 2E-09 6.9E-14 92.7 7.3 92 103-219 48-139 (219)
237 3vyw_A MNMC2; tRNA wobble urid 98.9 1.3E-08 4.3E-13 92.7 12.8 148 102-268 96-261 (308)
238 2p41_A Type II methyltransfera 98.9 2.1E-09 7.3E-14 98.2 7.4 126 101-247 81-215 (305)
239 2ih2_A Modification methylase 98.9 1.2E-09 4E-14 103.3 5.6 124 101-242 38-185 (421)
240 2g72_A Phenylethanolamine N-me 98.9 5.5E-10 1.9E-14 100.4 3.0 113 101-218 70-214 (289)
241 3giw_A Protein of unknown func 98.9 9.4E-09 3.2E-13 92.4 11.0 129 101-239 77-218 (277)
242 4a6d_A Hydroxyindole O-methylt 98.8 3.3E-08 1.1E-12 91.8 13.5 105 101-219 178-283 (353)
243 4e2x_A TCAB9; kijanose, tetron 98.8 1.6E-09 5.4E-14 102.6 4.1 103 101-219 106-208 (416)
244 3opn_A Putative hemolysin; str 98.8 4.8E-09 1.6E-13 92.1 6.5 98 101-218 36-136 (232)
245 2xyq_A Putative 2'-O-methyl tr 98.8 2E-08 6.8E-13 91.1 10.7 120 100-248 61-195 (290)
246 3lst_A CALO1 methyltransferase 98.8 8.3E-09 2.8E-13 95.5 8.2 104 101-219 183-286 (348)
247 1af7_A Chemotaxis receptor met 98.8 1.3E-08 4.3E-13 91.7 7.9 112 102-219 105-252 (274)
248 1m6y_A S-adenosyl-methyltransf 98.8 3.3E-08 1.1E-12 90.1 10.4 79 101-184 25-107 (301)
249 3ll7_A Putative methyltransfer 98.7 1.4E-08 4.7E-13 96.3 7.8 79 102-184 93-172 (410)
250 1zq9_A Probable dimethyladenos 98.7 2.7E-08 9.2E-13 89.8 9.5 76 101-184 27-102 (285)
251 4azs_A Methyltransferase WBDD; 98.7 2.6E-08 9.1E-13 98.3 10.2 77 101-183 65-142 (569)
252 3reo_A (ISO)eugenol O-methyltr 98.7 1.1E-08 3.8E-13 95.5 7.0 99 101-219 202-300 (368)
253 2r6z_A UPF0341 protein in RSP 98.7 1E-08 3.4E-13 91.5 6.2 80 102-186 83-172 (258)
254 1fp1_D Isoliquiritigenin 2'-O- 98.7 1.1E-08 3.9E-13 95.4 6.7 98 101-218 208-305 (372)
255 3gru_A Dimethyladenosine trans 98.7 2.5E-08 8.4E-13 90.7 8.6 76 100-184 48-123 (295)
256 1fp2_A Isoflavone O-methyltran 98.7 1.8E-08 6E-13 93.3 7.6 99 101-219 187-288 (352)
257 3lcv_B Sisomicin-gentamicin re 98.7 9.1E-09 3.1E-13 91.6 5.3 105 101-218 131-235 (281)
258 2zfu_A Nucleomethylin, cerebra 98.7 3.6E-08 1.2E-12 84.3 8.9 128 101-270 66-194 (215)
259 3p9c_A Caffeic acid O-methyltr 98.7 1.4E-08 4.9E-13 94.7 6.7 99 101-219 200-298 (364)
260 3fut_A Dimethyladenosine trans 98.7 5.7E-08 1.9E-12 87.3 10.2 99 101-218 46-144 (271)
261 3tqs_A Ribosomal RNA small sub 98.7 3.6E-08 1.2E-12 87.8 8.7 76 100-184 27-105 (255)
262 1qam_A ERMC' methyltransferase 98.7 9.6E-08 3.3E-12 84.2 10.5 75 101-184 29-103 (244)
263 3ldg_A Putative uncharacterize 98.6 8.5E-08 2.9E-12 90.3 9.9 111 101-219 193-343 (384)
264 3k0b_A Predicted N6-adenine-sp 98.6 2.2E-07 7.4E-12 87.8 12.3 111 101-219 200-350 (393)
265 3frh_A 16S rRNA methylase; met 98.6 4E-08 1.4E-12 86.6 6.7 102 101-218 104-205 (253)
266 2okc_A Type I restriction enzy 98.6 3.7E-08 1.3E-12 94.3 7.0 114 101-219 170-307 (445)
267 2oyr_A UPF0341 protein YHIQ; a 98.6 5.3E-08 1.8E-12 86.8 7.4 82 104-187 90-176 (258)
268 4fzv_A Putative methyltransfer 98.6 4.7E-07 1.6E-11 84.4 13.8 124 98-222 144-287 (359)
269 3ldu_A Putative methylase; str 98.6 4.6E-08 1.6E-12 92.1 6.7 111 101-219 194-344 (385)
270 3evf_A RNA-directed RNA polyme 98.6 1E-08 3.4E-13 91.7 1.9 163 101-279 73-239 (277)
271 2h1r_A Dimethyladenosine trans 98.6 6.7E-08 2.3E-12 87.8 6.8 75 101-184 41-115 (299)
272 1zg3_A Isoflavanone 4'-O-methy 98.5 6.9E-08 2.4E-12 89.5 5.9 98 102-219 193-293 (358)
273 3ftd_A Dimethyladenosine trans 98.5 5E-07 1.7E-11 80.0 11.1 100 101-219 30-131 (249)
274 2oo3_A Protein involved in cat 98.5 3.4E-07 1.2E-11 82.3 9.8 125 102-245 91-220 (283)
275 3lkd_A Type I restriction-modi 98.5 4.9E-07 1.7E-11 88.7 11.2 138 102-243 221-381 (542)
276 3khk_A Type I restriction-modi 98.5 3.1E-07 1.1E-11 90.2 9.7 138 101-243 243-419 (544)
277 3gcz_A Polyprotein; flavivirus 98.5 1.9E-08 6.7E-13 90.0 0.8 161 101-279 89-256 (282)
278 2wk1_A NOVP; transferase, O-me 98.5 3.5E-07 1.2E-11 82.5 8.5 109 100-219 104-244 (282)
279 2ar0_A M.ecoki, type I restric 98.4 3.2E-07 1.1E-11 90.1 8.2 138 101-242 168-334 (541)
280 2ld4_A Anamorsin; methyltransf 98.4 1.2E-07 4E-12 78.6 4.3 113 100-242 10-128 (176)
281 3s1s_A Restriction endonucleas 98.4 5.7E-07 1.9E-11 91.1 9.0 140 102-244 321-490 (878)
282 3uzu_A Ribosomal RNA small sub 98.4 5.9E-07 2E-11 80.9 7.7 77 100-184 40-123 (279)
283 3eld_A Methyltransferase; flav 98.4 2.8E-07 9.5E-12 83.0 5.2 163 100-279 79-246 (300)
284 1qyr_A KSGA, high level kasuga 98.4 4.6E-07 1.6E-11 80.4 6.4 76 101-184 20-99 (252)
285 3ua3_A Protein arginine N-meth 98.4 1.8E-06 6.3E-11 86.2 11.1 105 103-216 410-531 (745)
286 3v97_A Ribosomal RNA large sub 98.3 8.1E-07 2.8E-11 89.8 7.4 113 101-219 189-347 (703)
287 4gqb_A Protein arginine N-meth 98.3 8.7E-07 3E-11 88.1 7.2 103 103-216 358-464 (637)
288 1yub_A Ermam, rRNA methyltrans 98.2 6.4E-08 2.2E-12 85.1 -3.2 75 101-184 28-102 (245)
289 3r24_A NSP16, 2'-O-methyl tran 98.1 1.9E-05 6.7E-10 70.9 11.3 136 100-265 107-255 (344)
290 1wg8_A Predicted S-adenosylmet 98.1 1.7E-05 5.9E-10 71.1 10.1 74 101-184 21-98 (285)
291 3ps9_A TRNA 5-methylaminomethy 98.0 4.8E-05 1.6E-09 76.3 14.1 114 102-219 66-219 (676)
292 3pvc_A TRNA 5-methylaminomethy 98.0 1E-05 3.4E-10 81.4 8.7 114 102-219 58-211 (689)
293 2px2_A Genome polyprotein [con 98.0 3.2E-05 1.1E-09 68.3 9.4 155 100-274 71-233 (269)
294 3p8z_A Mtase, non-structural p 97.9 8.4E-05 2.9E-09 64.8 10.2 133 101-248 77-211 (267)
295 3lkz_A Non-structural protein 97.6 8.6E-05 2.9E-09 66.7 5.9 134 101-248 93-229 (321)
296 2efj_A 3,7-dimethylxanthine me 97.5 0.00057 2E-08 64.0 10.8 111 103-220 53-226 (384)
297 1i4w_A Mitochondrial replicati 97.5 0.00011 3.8E-09 68.1 5.9 59 103-168 59-117 (353)
298 3ufb_A Type I restriction-modi 97.5 0.0002 6.9E-09 69.9 7.9 138 100-243 215-385 (530)
299 3tka_A Ribosomal RNA small sub 97.4 0.0005 1.7E-08 63.1 8.4 76 101-184 56-137 (347)
300 4auk_A Ribosomal RNA large sub 97.4 0.00019 6.4E-09 66.8 5.6 71 101-185 210-280 (375)
301 1g55_A DNA cytosine methyltran 97.3 0.0016 5.6E-08 59.9 11.7 151 103-268 2-170 (343)
302 3b5i_A S-adenosyl-L-methionine 97.2 0.00056 1.9E-08 63.9 6.5 119 101-220 51-226 (374)
303 2k4m_A TR8_protein, UPF0146 pr 97.1 0.00027 9.3E-09 57.2 3.7 64 101-184 34-99 (153)
304 2c7p_A Modification methylase 97.1 0.0099 3.4E-07 54.3 14.4 148 103-267 11-173 (327)
305 1m6e_X S-adenosyl-L-methionnin 97.0 0.00066 2.3E-08 63.0 5.2 115 101-219 50-209 (359)
306 2zig_A TTHA0409, putative modi 97.0 0.0014 4.7E-08 59.0 6.9 46 101-148 234-279 (297)
307 4h0n_A DNMT2; SAH binding, tra 96.8 0.056 1.9E-06 49.4 16.3 150 104-268 4-170 (333)
308 3qv2_A 5-cytosine DNA methyltr 96.7 0.047 1.6E-06 49.8 14.8 151 102-268 9-181 (327)
309 3g7u_A Cytosine-specific methy 96.6 0.0042 1.4E-07 58.0 7.4 122 104-241 3-141 (376)
310 3m6i_A L-arabinitol 4-dehydrog 96.5 0.032 1.1E-06 51.1 12.8 99 100-219 177-283 (363)
311 3tos_A CALS11; methyltransfera 96.4 0.05 1.7E-06 48.0 12.7 108 101-219 68-217 (257)
312 3s2e_A Zinc-containing alcohol 96.4 0.0085 2.9E-07 54.5 7.9 98 101-219 165-263 (340)
313 1pl8_A Human sorbitol dehydrog 96.4 0.059 2E-06 49.2 13.7 97 100-219 169-273 (356)
314 1f8f_A Benzyl alcohol dehydrog 96.2 0.0078 2.7E-07 55.5 7.0 99 101-219 189-289 (371)
315 3ubt_Y Modification methylase 96.2 0.058 2E-06 48.7 12.5 148 105-268 2-164 (331)
316 3fpc_A NADP-dependent alcohol 96.1 0.015 5E-07 53.2 8.2 100 100-219 164-266 (352)
317 4ej6_A Putative zinc-binding d 96.1 0.016 5.6E-07 53.4 8.6 100 100-219 180-284 (370)
318 1g60_A Adenine-specific methyl 96.0 0.014 4.7E-07 51.3 7.0 47 100-148 210-256 (260)
319 3jv7_A ADH-A; dehydrogenase, n 95.8 0.018 6.2E-07 52.4 7.4 99 100-219 169-270 (345)
320 2dph_A Formaldehyde dismutase; 95.7 0.029 1E-06 52.2 8.5 110 100-218 183-298 (398)
321 3uko_A Alcohol dehydrogenase c 95.7 0.048 1.6E-06 50.3 9.6 99 101-219 192-295 (378)
322 4eez_A Alcohol dehydrogenase 1 95.6 0.043 1.5E-06 49.7 9.2 100 100-219 161-263 (348)
323 1uuf_A YAHK, zinc-type alcohol 95.6 0.074 2.5E-06 49.0 10.6 95 100-218 192-287 (369)
324 1e3j_A NADP(H)-dependent ketos 95.5 0.071 2.4E-06 48.5 10.2 99 100-219 166-271 (352)
325 1cdo_A Alcohol dehydrogenase; 95.4 0.078 2.7E-06 48.7 10.3 97 101-219 191-294 (374)
326 3me5_A Cytosine-specific methy 95.4 0.16 5.4E-06 48.8 12.4 127 103-241 88-250 (482)
327 1p0f_A NADP-dependent alcohol 95.4 0.087 3E-06 48.4 10.2 96 101-219 190-293 (373)
328 1e3i_A Alcohol dehydrogenase, 95.4 0.099 3.4E-06 48.0 10.6 99 101-219 194-297 (376)
329 1kol_A Formaldehyde dehydrogen 95.3 0.1 3.4E-06 48.4 10.5 110 100-218 183-299 (398)
330 2jhf_A Alcohol dehydrogenase E 95.3 0.098 3.4E-06 48.0 10.3 96 101-219 190-293 (374)
331 2fzw_A Alcohol dehydrogenase c 95.2 0.1 3.5E-06 47.8 10.2 96 101-219 189-292 (373)
332 3two_A Mannitol dehydrogenase; 95.2 0.056 1.9E-06 49.2 8.2 91 100-219 174-265 (348)
333 1pjc_A Protein (L-alanine dehy 95.1 0.22 7.4E-06 45.8 12.1 100 102-218 166-266 (361)
334 3uog_A Alcohol dehydrogenase; 95.1 0.08 2.7E-06 48.5 9.1 94 101-219 188-287 (363)
335 2b5w_A Glucose dehydrogenase; 95.1 0.028 9.6E-07 51.4 6.0 94 104-219 174-273 (357)
336 1g60_A Adenine-specific methyl 95.1 0.018 6E-07 50.6 4.4 62 157-219 4-74 (260)
337 3ip1_A Alcohol dehydrogenase, 95.0 0.042 1.4E-06 51.3 6.8 101 101-219 212-318 (404)
338 4b7c_A Probable oxidoreductase 94.9 0.041 1.4E-06 49.7 6.4 98 100-218 147-247 (336)
339 1boo_A Protein (N-4 cytosine-s 94.8 0.027 9.3E-07 51.2 5.0 66 154-220 11-85 (323)
340 1pqw_A Polyketide synthase; ro 94.8 0.043 1.5E-06 45.5 5.8 97 101-219 37-137 (198)
341 1vj0_A Alcohol dehydrogenase, 94.8 0.11 3.6E-06 48.0 9.0 96 101-219 194-298 (380)
342 4a2c_A Galactitol-1-phosphate 94.7 0.17 6E-06 45.6 10.2 100 100-219 158-260 (346)
343 1rjw_A ADH-HT, alcohol dehydro 94.6 0.035 1.2E-06 50.4 5.2 99 100-219 162-261 (339)
344 3fwz_A Inner membrane protein 94.6 0.19 6.7E-06 39.3 9.0 94 103-219 7-105 (140)
345 4dvj_A Putative zinc-dependent 94.5 0.099 3.4E-06 48.0 8.2 96 102-218 171-269 (363)
346 3iht_A S-adenosyl-L-methionine 94.5 0.083 2.8E-06 42.9 6.5 106 98-217 36-145 (174)
347 3ggo_A Prephenate dehydrogenas 94.5 0.46 1.6E-05 42.7 12.4 91 103-217 33-126 (314)
348 2qrv_A DNA (cytosine-5)-methyl 94.4 0.065 2.2E-06 48.2 6.5 74 101-184 14-92 (295)
349 2h6e_A ADH-4, D-arabinose 1-de 94.4 0.11 3.8E-06 47.1 8.2 93 102-218 170-268 (344)
350 1eg2_A Modification methylase 94.4 0.038 1.3E-06 50.3 4.9 65 155-220 36-107 (319)
351 2d8a_A PH0655, probable L-thre 94.4 0.045 1.5E-06 49.8 5.4 98 102-219 167-267 (348)
352 1piw_A Hypothetical zinc-type 94.4 0.13 4.4E-06 47.0 8.5 97 100-218 177-275 (360)
353 2zig_A TTHA0409, putative modi 94.3 0.051 1.7E-06 48.6 5.4 65 155-220 19-98 (297)
354 2vhw_A Alanine dehydrogenase; 94.2 0.41 1.4E-05 44.2 11.6 97 102-219 167-267 (377)
355 2cf5_A Atccad5, CAD, cinnamyl 94.0 0.19 6.4E-06 45.9 8.7 95 102-219 180-275 (357)
356 3swr_A DNA (cytosine-5)-methyl 94.0 1.8 6.2E-05 45.2 16.8 153 103-268 540-723 (1002)
357 1v3u_A Leukotriene B4 12- hydr 93.9 0.12 4E-06 46.6 7.2 95 101-219 144-244 (333)
358 2dq4_A L-threonine 3-dehydroge 93.8 0.083 2.8E-06 47.9 6.0 97 102-219 164-262 (343)
359 3p2y_A Alanine dehydrogenase/p 93.8 0.23 8E-06 46.2 9.0 106 102-216 183-299 (381)
360 3gms_A Putative NADPH:quinone 93.7 0.051 1.7E-06 49.3 4.3 98 100-219 142-243 (340)
361 1yqd_A Sinapyl alcohol dehydro 93.7 0.28 9.6E-06 44.9 9.3 94 102-218 187-281 (366)
362 2hcy_A Alcohol dehydrogenase 1 93.6 0.38 1.3E-05 43.5 10.0 96 101-219 168-269 (347)
363 2j3h_A NADP-dependent oxidored 93.5 0.11 3.9E-06 46.9 6.3 95 101-218 154-254 (345)
364 3goh_A Alcohol dehydrogenase, 93.5 0.082 2.8E-06 47.3 5.3 88 101-219 141-229 (315)
365 4dio_A NAD(P) transhydrogenase 93.4 0.31 1E-05 45.7 9.2 106 102-216 189-309 (405)
366 2c0c_A Zinc binding alcohol de 93.4 0.13 4.4E-06 47.1 6.5 98 100-219 161-261 (362)
367 3jyn_A Quinone oxidoreductase; 93.2 0.1 3.5E-06 46.9 5.5 97 101-219 139-239 (325)
368 3llv_A Exopolyphosphatase-rela 93.2 0.61 2.1E-05 36.1 9.4 69 103-184 6-79 (141)
369 1iz0_A Quinone oxidoreductase; 93.2 0.24 8.3E-06 43.9 7.9 92 100-218 123-217 (302)
370 3l9w_A Glutathione-regulated p 93.2 0.49 1.7E-05 44.4 10.3 94 103-219 4-102 (413)
371 3qwb_A Probable quinone oxidor 93.2 0.098 3.4E-06 47.2 5.3 97 101-219 147-247 (334)
372 2cdc_A Glucose dehydrogenase g 93.1 0.16 5.6E-06 46.4 6.7 93 103-219 181-278 (366)
373 3fbg_A Putative arginate lyase 93.0 0.25 8.5E-06 44.8 7.8 95 102-218 150-247 (346)
374 4eye_A Probable oxidoreductase 92.9 0.18 6.3E-06 45.7 6.7 95 101-218 158-256 (342)
375 1jvb_A NAD(H)-dependent alcoho 92.9 0.28 9.7E-06 44.4 7.9 98 100-219 168-271 (347)
376 2eez_A Alanine dehydrogenase; 92.9 0.8 2.7E-05 42.1 11.1 98 102-216 165-263 (369)
377 2zb4_A Prostaglandin reductase 92.7 0.16 5.5E-06 46.2 6.1 98 101-218 157-259 (357)
378 2py6_A Methyltransferase FKBM; 92.7 0.21 7.3E-06 46.8 7.0 48 101-148 225-274 (409)
379 3gaz_A Alcohol dehydrogenase s 92.7 0.28 9.7E-06 44.4 7.6 94 101-219 149-246 (343)
380 1l7d_A Nicotinamide nucleotide 92.4 0.52 1.8E-05 43.6 9.2 42 102-144 171-213 (384)
381 3c85_A Putative glutathione-re 92.2 0.79 2.7E-05 37.2 9.2 95 103-219 39-139 (183)
382 1wly_A CAAR, 2-haloacrylate re 92.1 0.19 6.7E-06 45.2 5.8 97 101-219 144-244 (333)
383 3dfz_A SIRC, precorrin-2 dehyd 92.1 0.24 8E-06 42.7 6.0 80 90-185 18-101 (223)
384 1qor_A Quinone oxidoreductase; 92.1 0.16 5.4E-06 45.6 5.1 95 101-219 139-239 (327)
385 4dup_A Quinone oxidoreductase; 92.0 0.17 5.8E-06 46.1 5.3 97 101-219 166-265 (353)
386 2eih_A Alcohol dehydrogenase; 92.0 0.17 5.9E-06 45.8 5.3 97 101-219 165-265 (343)
387 1boo_A Protein (N-4 cytosine-s 91.6 0.38 1.3E-05 43.5 7.0 63 100-169 250-312 (323)
388 3av4_A DNA (cytosine-5)-methyl 91.5 5.9 0.0002 42.6 16.9 153 102-267 850-1033(1330)
389 1x13_A NAD(P) transhydrogenase 91.2 0.61 2.1E-05 43.6 8.2 43 102-145 171-214 (401)
390 1id1_A Putative potassium chan 91.0 1.4 4.7E-05 34.6 9.1 98 103-220 3-106 (153)
391 3l4b_C TRKA K+ channel protien 91.0 1.6 5.5E-05 36.5 10.1 93 105-219 2-99 (218)
392 2o3j_A UDP-glucose 6-dehydroge 90.7 4.2 0.00014 38.6 13.9 109 104-218 10-134 (481)
393 3ic5_A Putative saccharopine d 90.7 1.5 5.2E-05 32.1 8.7 69 103-183 5-77 (118)
394 1yb5_A Quinone oxidoreductase; 90.6 0.29 9.8E-06 44.6 5.3 97 101-219 169-269 (351)
395 2hwk_A Helicase NSP2; rossman 90.6 0.27 9.3E-06 43.8 4.8 85 174-268 205-298 (320)
396 2vn8_A Reticulon-4-interacting 90.5 0.79 2.7E-05 41.9 8.2 97 101-219 182-280 (375)
397 1zcj_A Peroxisomal bifunctiona 90.5 2 7E-05 40.7 11.3 102 103-220 37-151 (463)
398 1jw9_B Molybdopterin biosynthe 90.4 0.56 1.9E-05 40.7 6.8 34 102-136 30-65 (249)
399 4ft4_B DNA (cytosine-5)-methyl 90.3 3.1 0.0001 42.0 13.1 57 103-168 212-273 (784)
400 1lss_A TRK system potassium up 90.1 2.7 9.3E-05 31.7 10.0 70 103-184 4-78 (140)
401 2dpo_A L-gulonate 3-dehydrogen 90.1 1.4 4.7E-05 39.8 9.3 102 103-219 6-123 (319)
402 4a7p_A UDP-glucose dehydrogena 90.0 3 0.0001 39.4 12.0 141 102-255 7-160 (446)
403 3gqv_A Enoyl reductase; medium 89.9 0.91 3.1E-05 41.5 8.1 96 101-218 163-262 (371)
404 3qsg_A NAD-binding phosphogluc 89.8 10 0.00035 33.6 15.2 112 103-246 24-139 (312)
405 4g65_A TRK system potassium up 89.7 3 0.0001 39.5 11.8 73 101-184 233-309 (461)
406 2g5c_A Prephenate dehydrogenas 89.7 1.2 4E-05 38.8 8.3 90 104-217 2-94 (281)
407 2j8z_A Quinone oxidoreductase; 89.6 0.38 1.3E-05 43.7 5.2 97 101-219 161-261 (354)
408 3h8v_A Ubiquitin-like modifier 89.6 0.46 1.6E-05 42.5 5.6 34 102-136 35-70 (292)
409 4e12_A Diketoreductase; oxidor 89.6 1.3 4.3E-05 39.0 8.5 102 103-219 4-121 (283)
410 4a27_A Synaptic vesicle membra 89.4 0.53 1.8E-05 42.6 6.0 95 101-219 141-238 (349)
411 4a0s_A Octenoyl-COA reductase/ 89.4 1.3 4.5E-05 41.4 8.9 44 101-145 219-264 (447)
412 3e8x_A Putative NAD-dependent 89.4 0.68 2.3E-05 39.0 6.4 69 102-184 20-93 (236)
413 3mog_A Probable 3-hydroxybutyr 89.3 1.3 4.6E-05 42.3 9.0 102 103-220 5-121 (483)
414 1zud_1 Adenylyltransferase THI 89.2 1.3 4.3E-05 38.5 8.1 35 102-136 27-62 (251)
415 4e21_A 6-phosphogluconate dehy 89.1 5.7 0.00019 36.3 12.8 108 103-240 22-131 (358)
416 3tqh_A Quinone oxidoreductase; 88.7 2.2 7.7E-05 37.8 9.6 92 100-218 150-244 (321)
417 3nx4_A Putative oxidoreductase 88.6 0.51 1.7E-05 42.1 5.3 90 105-219 149-241 (324)
418 1eg2_A Modification methylase 88.6 0.7 2.4E-05 41.7 6.2 46 100-147 240-288 (319)
419 3ktd_A Prephenate dehydrogenas 88.5 1.9 6.6E-05 39.2 9.1 93 101-219 6-100 (341)
420 2g1u_A Hypothetical protein TM 88.5 1.1 3.7E-05 35.4 6.6 98 101-220 17-119 (155)
421 3oig_A Enoyl-[acyl-carrier-pro 88.3 6.8 0.00023 33.4 12.3 78 101-184 5-96 (266)
422 3ijr_A Oxidoreductase, short c 88.2 8.6 0.0003 33.5 13.1 76 102-184 46-134 (291)
423 1ldn_A L-lactate dehydrogenase 88.2 7.6 0.00026 34.6 12.9 109 102-219 5-123 (316)
424 3gt0_A Pyrroline-5-carboxylate 88.2 2.1 7.2E-05 36.6 8.8 89 104-217 3-95 (247)
425 1zej_A HBD-9, 3-hydroxyacyl-CO 88.1 2.3 8E-05 37.8 9.2 97 101-220 10-108 (293)
426 2vz8_A Fatty acid synthase; tr 88.1 0.075 2.6E-06 60.7 -0.8 88 105-217 1243-1346(2512)
427 3tum_A Shikimate dehydrogenase 88.0 8.5 0.00029 33.7 12.7 96 75-184 99-196 (269)
428 3pqe_A L-LDH, L-lactate dehydr 87.8 7.8 0.00027 34.9 12.7 108 101-220 3-123 (326)
429 2y0c_A BCEC, UDP-glucose dehyd 87.7 7.7 0.00026 36.9 13.1 109 102-218 7-127 (478)
430 3oj0_A Glutr, glutamyl-tRNA re 87.6 5.5 0.00019 30.7 10.2 67 102-185 20-90 (144)
431 3h2s_A Putative NADH-flavin re 87.5 2.9 9.9E-05 34.4 9.1 67 105-185 2-72 (224)
432 3gg2_A Sugar dehydrogenase, UD 87.4 12 0.00041 35.2 14.2 108 104-219 3-122 (450)
433 3b1f_A Putative prephenate deh 87.4 1.9 6.5E-05 37.7 8.1 89 104-216 7-98 (290)
434 3o26_A Salutaridine reductase; 87.3 1.5 5.2E-05 38.2 7.4 77 102-184 11-100 (311)
435 3ado_A Lambda-crystallin; L-gu 87.2 4.1 0.00014 36.7 10.4 105 101-220 4-124 (319)
436 2q3e_A UDP-glucose 6-dehydroge 87.1 6.8 0.00023 36.9 12.4 108 104-217 6-129 (467)
437 3hdj_A Probable ornithine cycl 87.1 4.1 0.00014 36.5 10.3 76 98-185 116-193 (313)
438 3d0o_A L-LDH 1, L-lactate dehy 87.0 11 0.00038 33.6 13.2 110 102-219 5-123 (317)
439 1a5z_A L-lactate dehydrogenase 87.0 5.5 0.00019 35.6 11.1 106 105-219 2-116 (319)
440 1f0y_A HCDH, L-3-hydroxyacyl-C 86.9 4.9 0.00017 35.3 10.6 102 103-219 15-136 (302)
441 3qiv_A Short-chain dehydrogena 86.7 3.2 0.00011 35.2 9.0 76 102-184 8-95 (253)
442 2gn4_A FLAA1 protein, UDP-GLCN 86.6 3.6 0.00012 36.9 9.8 76 101-184 19-100 (344)
443 3lyl_A 3-oxoacyl-(acyl-carrier 86.5 4 0.00014 34.4 9.5 76 102-184 4-91 (247)
444 3h7a_A Short chain dehydrogena 86.3 3 0.0001 35.6 8.7 75 102-184 6-92 (252)
445 3i1j_A Oxidoreductase, short c 86.2 6.7 0.00023 32.9 10.8 77 102-184 13-103 (247)
446 3ucx_A Short chain dehydrogena 86.2 12 0.0004 32.0 12.5 76 102-184 10-97 (264)
447 3f1l_A Uncharacterized oxidore 86.2 8.8 0.0003 32.5 11.7 77 102-184 11-101 (252)
448 3ce6_A Adenosylhomocysteinase; 85.9 5.4 0.00018 38.2 10.9 89 101-220 272-361 (494)
449 3ew7_A LMO0794 protein; Q8Y8U8 85.9 2.4 8E-05 34.8 7.6 66 105-185 2-71 (221)
450 3n58_A Adenosylhomocysteinase; 85.8 5.9 0.0002 37.6 10.9 90 101-221 245-335 (464)
451 1xa0_A Putative NADPH dependen 85.7 1.2 4.1E-05 39.7 5.9 91 105-219 152-246 (328)
452 3tjr_A Short chain dehydrogena 85.4 4.2 0.00014 35.8 9.4 77 101-184 29-117 (301)
453 2f1k_A Prephenate dehydrogenas 85.2 3.8 0.00013 35.4 8.9 87 105-219 2-90 (279)
454 1bg6_A N-(1-D-carboxylethyl)-L 85.1 4.6 0.00016 36.1 9.7 98 104-217 5-107 (359)
455 3d4o_A Dipicolinate synthase s 85.1 9.1 0.00031 33.5 11.5 90 101-220 153-244 (293)
456 2v6b_A L-LDH, L-lactate dehydr 85.0 9 0.00031 33.9 11.4 106 105-219 2-116 (304)
457 3vku_A L-LDH, L-lactate dehydr 84.8 14 0.00046 33.4 12.6 112 100-220 6-126 (326)
458 1y6j_A L-lactate dehydrogenase 84.8 6.2 0.00021 35.3 10.3 109 102-220 6-124 (318)
459 1yb1_A 17-beta-hydroxysteroid 84.7 6.3 0.00022 33.8 10.1 76 102-184 30-117 (272)
460 3rui_A Ubiquitin-like modifier 84.7 1.8 6.2E-05 39.5 6.6 34 102-136 33-68 (340)
461 3krt_A Crotonyl COA reductase; 84.6 3 0.0001 39.2 8.4 102 101-218 227-343 (456)
462 3o38_A Short chain dehydrogena 84.6 3.9 0.00013 34.9 8.6 77 102-184 21-110 (266)
463 3k96_A Glycerol-3-phosphate de 84.5 11 0.00038 34.2 12.1 98 103-218 29-132 (356)
464 3guy_A Short-chain dehydrogena 84.5 3.9 0.00013 34.2 8.4 71 104-184 2-81 (230)
465 3g0o_A 3-hydroxyisobutyrate de 84.5 4.9 0.00017 35.4 9.4 108 102-240 6-118 (303)
466 4fn4_A Short chain dehydrogena 84.4 13 0.00043 32.2 11.8 76 102-184 6-93 (254)
467 2rir_A Dipicolinate synthase, 84.4 9.1 0.00031 33.6 11.2 89 101-219 155-245 (300)
468 1fmc_A 7 alpha-hydroxysteroid 84.2 3.9 0.00013 34.4 8.3 75 102-184 10-97 (255)
469 3rkr_A Short chain oxidoreduct 84.0 8.2 0.00028 32.9 10.5 77 102-185 28-116 (262)
470 2i6t_A Ubiquitin-conjugating e 84.0 4 0.00014 36.4 8.6 105 103-220 14-126 (303)
471 3grk_A Enoyl-(acyl-carrier-pro 84.0 5.7 0.00019 34.8 9.5 75 102-184 30-118 (293)
472 3vrd_B FCCB subunit, flavocyto 83.7 0.9 3.1E-05 41.5 4.3 34 103-136 2-37 (401)
473 3v8b_A Putative dehydrogenase, 83.5 14 0.00047 32.1 11.8 76 102-184 27-114 (283)
474 2ew2_A 2-dehydropantoate 2-red 83.4 5.6 0.00019 34.6 9.3 98 104-218 4-107 (316)
475 3trk_A Nonstructural polyprote 83.4 2.4 8.3E-05 37.4 6.5 71 173-248 209-284 (324)
476 3vh1_A Ubiquitin-like modifier 83.3 1.8 6.1E-05 42.5 6.3 32 103-135 327-360 (598)
477 3awd_A GOX2181, putative polyo 83.3 6.4 0.00022 33.2 9.4 76 102-184 12-99 (260)
478 3imf_A Short chain dehydrogena 83.2 4.3 0.00015 34.6 8.3 76 102-184 5-92 (257)
479 3r3s_A Oxidoreductase; structu 83.1 14 0.00049 32.1 11.9 77 102-185 48-138 (294)
480 3ioy_A Short-chain dehydrogena 83.0 6 0.00021 35.1 9.4 78 102-184 7-96 (319)
481 3tri_A Pyrroline-5-carboxylate 82.8 4.5 0.00015 35.4 8.3 89 104-217 4-96 (280)
482 4e6p_A Probable sorbitol dehyd 82.8 8.9 0.0003 32.6 10.2 75 101-185 6-92 (259)
483 3gaf_A 7-alpha-hydroxysteroid 82.7 5 0.00017 34.3 8.5 77 101-184 10-98 (256)
484 3k6j_A Protein F01G10.3, confi 82.7 7.1 0.00024 37.0 10.1 102 103-220 54-167 (460)
485 3cea_A MYO-inositol 2-dehydrog 82.7 10 0.00035 33.7 10.9 71 102-185 7-81 (346)
486 3sju_A Keto reductase; short-c 82.6 6.4 0.00022 34.1 9.2 76 102-184 23-110 (279)
487 2h78_A Hibadh, 3-hydroxyisobut 82.5 16 0.00056 31.7 12.0 87 104-217 4-95 (302)
488 3abi_A Putative uncharacterize 82.5 4 0.00014 37.1 8.1 70 101-184 14-86 (365)
489 1y1p_A ARII, aldehyde reductas 82.5 3.9 0.00013 35.9 7.9 77 101-184 9-92 (342)
490 1y8q_A Ubiquitin-like 1 activa 82.2 1.8 6.1E-05 39.5 5.6 52 84-136 15-70 (346)
491 1hyh_A L-hicdh, L-2-hydroxyiso 82.2 11 0.00039 33.2 10.9 76 104-186 2-80 (309)
492 1wwk_A Phosphoglycerate dehydr 82.0 14 0.00049 32.7 11.5 106 102-240 141-248 (307)
493 1yxm_A Pecra, peroxisomal tran 82.0 9 0.00031 33.2 10.1 81 102-184 17-109 (303)
494 3sx2_A Putative 3-ketoacyl-(ac 82.0 6.8 0.00023 33.6 9.2 76 102-184 12-111 (278)
495 1tt7_A YHFP; alcohol dehydroge 81.9 1.7 5.7E-05 38.8 5.2 90 105-219 153-247 (330)
496 1oju_A MDH, malate dehydrogena 81.8 21 0.00072 31.5 12.4 105 105-220 2-119 (294)
497 3rd5_A Mypaa.01249.C; ssgcid, 81.7 8.5 0.00029 33.4 9.8 72 102-184 15-95 (291)
498 1zkd_A DUF185; NESG, RPR58, st 81.7 1.4 4.9E-05 40.9 4.7 47 100-146 78-131 (387)
499 1omo_A Alanine dehydrogenase; 81.6 13 0.00045 33.1 11.2 75 99-185 121-197 (322)
500 4g65_A TRK system potassium up 81.5 5.6 0.00019 37.6 9.0 68 104-183 4-76 (461)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.2e-54 Score=393.51 Aligned_cols=262 Identities=36% Similarity=0.612 Sum_probs=228.3
Q ss_pred ccceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEE
Q 022451 28 KSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIF 107 (297)
Q Consensus 28 ~~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL 107 (297)
...|+ |++.++.++.|+++++|++++|+||+|.|+++..+|++|+|||.+|++++||+.|||||+|+|++.+++|++||
T Consensus 10 ~~~w~-e~~~~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VL 88 (294)
T 3o4f_A 10 KKQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVL 88 (294)
T ss_dssp CEEEE-CCSSSSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred cccee-eeccCCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEE
Confidence 45687 56778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCC
Q 022451 108 IMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (297)
Q Consensus 108 ~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~-~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~ 186 (297)
+||+|+|+++++++++.+..+|++|||||+|+++|++||+ .....++|||++++++||+.|++...++||+||+|+++|
T Consensus 89 IiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp 168 (294)
T 3o4f_A 89 IIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDP 168 (294)
T ss_dssp EESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCC
T ss_pred EECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCc
Confidence 9999999999999999888999999999999999999997 345567899999999999999998889999999999998
Q ss_pred CCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccC-CceeEEEEe
Q 022451 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFA-DTWGWIMVS 265 (297)
Q Consensus 187 ~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~-~~~~~~~as 265 (297)
. +++..|++.+||+. ++++|+|||++++|.++| +...+.+..+.++++++|+.+.+|.+.+|+|+ +.|+|++||
T Consensus 169 ~--~~~~~L~t~eFy~~-~~~~L~p~Gv~v~q~~sp--~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as 243 (294)
T 3o4f_A 169 I--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp C--CTTCCSSCCHHHHH-HHHTEEEEEEEEEEEEES--SSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEE
T ss_pred C--CCchhhcCHHHHHH-HHHHhCCCCEEEEecCCc--ccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEE
Confidence 7 56689999999999 799999999999999887 67788899999999999999999999999994 679999999
Q ss_pred cCCCCCCcccccccccccCCCCCCcccCCC
Q 022451 266 IYNPHSHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 266 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+.+...+.-....+..-....-.++|||+-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~yyn~~ 273 (294)
T 3o4f_A 244 DNDALRHLSTEIIQARFLASGLKCRYYNPA 273 (294)
T ss_dssp SCTTGGGCCHHHHHHHHHSSCCCCSSCCHH
T ss_pred CCCccccCChHHHhHHHHhhCCCceEECHH
Confidence 987553332222111111223468999874
No 2
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=1.2e-44 Score=331.73 Aligned_cols=261 Identities=35% Similarity=0.597 Sum_probs=208.8
Q ss_pred ccceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEE
Q 022451 28 KSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIF 107 (297)
Q Consensus 28 ~~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL 107 (297)
..-|.+ ++.++.+.+|++.++|++++|+||+|.|+++..+|++|++||.+|++++|++.|+|+|+|++++.++++++||
T Consensus 10 ~~~~~~-~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VL 88 (294)
T 3adn_A 10 KKQWHE-TLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVL 88 (294)
T ss_dssp --CEEC-CSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred hhcccc-ccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEE
Confidence 346885 5778999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred EEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCC
Q 022451 108 IMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (297)
Q Consensus 108 ~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~ 186 (297)
+||||+|.++++++++.+..+|++||+|+.+++.|+++++.. ...++++|++++.+|++++++...++||+|++|+++|
T Consensus 89 diG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p 168 (294)
T 3adn_A 89 IIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDP 168 (294)
T ss_dssp EESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC---
T ss_pred EEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCc
Confidence 999999999999999877889999999999999999998743 3345679999999999999987678999999999988
Q ss_pred CCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCcc-CCceeEEEEe
Q 022451 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSF-ADTWGWIMVS 265 (297)
Q Consensus 187 ~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~-~~~~~~~~as 265 (297)
. .+...|++.+||+. ++++|+|||+++++.++| +...+.++.+.++++++|+.+.+|...+|+| ++.|+|++||
T Consensus 169 ~--~~~~~l~~~~f~~~-~~~~LkpgG~lv~~~~s~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as 243 (294)
T 3adn_A 169 I--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp ---------CCHHHHHH-HHHTEEEEEEEEEEEEEC--SSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEE
T ss_pred c--CcchhccHHHHHHH-HHHhcCCCCEEEEecCCc--ccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEe
Confidence 7 55568999999999 899999999999998776 5667889999999999999999999999999 4679999999
Q ss_pred cCCCCC-CcccccccccccCCCCCCcccCCC
Q 022451 266 IYNPHS-HSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 266 ~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+.+... .+...+.+... ...-+++|||+-
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~yy~~~ 273 (294)
T 3adn_A 244 DNDALRHLSTEIIQARFL-ASGLKCRYYNPA 273 (294)
T ss_dssp SCTTCSCCHHHHCCCCCC-----CCSSCCHH
T ss_pred CCcccccCCHHHHHHHHh-ccCCCCeEECHH
Confidence 986432 22222321111 111268999864
No 3
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=1.7e-43 Score=321.17 Aligned_cols=256 Identities=30% Similarity=0.623 Sum_probs=221.6
Q ss_pred cceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEE
Q 022451 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (297)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~ 108 (297)
.+|++|..+++.+.++++.++|++++|+||+|.|+++..+|+.|++||..|++++|++.|+|+|.|++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLd 81 (275)
T 1iy9_A 2 ELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLV 81 (275)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CccEEEecCCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEE
Confidence 47999998899999999999999999999999999999999999999999999999999999999998877888999999
Q ss_pred EccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCC
Q 022451 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIE 188 (297)
Q Consensus 109 iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~ 188 (297)
||||+|.++++++++.+..+|++||+||.+++.|+++++.....+.++|++++.+|+++++....++||+|++|++++.
T Consensus 82 iG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~- 160 (275)
T 1iy9_A 82 VGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPV- 160 (275)
T ss_dssp ESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCC-
T ss_pred ECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCC-
Confidence 9999999999999986778999999999999999999864222345799999999999999876788999999999876
Q ss_pred CCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCcc-CCceeEEEEecC
Q 022451 189 GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSF-ADTWGWIMVSIY 267 (297)
Q Consensus 189 ~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~-~~~~~~~~as~~ 267 (297)
.+...|++.+||+. ++++|+|||+++++..+| +.+.+.++.+.++++++|+.+.+|...+|+| ++.|.|++||+.
T Consensus 161 -~~~~~l~~~~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~ 236 (275)
T 1iy9_A 161 -GPAVNLFTKGFYAG-IAKALKEDGIFVAQTDNP--WFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKK 236 (275)
T ss_dssp -SCCCCCSTTHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESS
T ss_pred -CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--cccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCC
Confidence 45568899999999 799999999999998766 5567888999999999999999999999999 567999999987
Q ss_pred CCCCCcccccccccccCCCCCCcccCCC
Q 022451 268 NPHSHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 268 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
..+.. +... -+.....+|||+-
T Consensus 237 ~~~~~----~~~~--~~~~~~~~~~~~~ 258 (275)
T 1iy9_A 237 YDPLA----VEDS--RFFDIETKYYTKD 258 (275)
T ss_dssp CCTTC----CCGG--GCCCCCCSSCCHH
T ss_pred CCccc----cchh--hccccCCeEeCHH
Confidence 43321 2211 1122467999874
No 4
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=5.8e-44 Score=334.02 Aligned_cols=240 Identities=21% Similarity=0.355 Sum_probs=202.6
Q ss_pred ccCCccccceEEee--eccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhc
Q 022451 22 ALTGYRKSCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLH 99 (297)
Q Consensus 22 ~~~~~~~~~w~~~~--~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~ 99 (297)
.++.+.+++|++.. .+++....|+++++|++++|+||+|.|++++.+|++|+|||.+|++++| +.|+|+|+|++++.
T Consensus 125 ~~~~~~rg~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~ 203 (381)
T 3c6k_A 125 RLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKED 203 (381)
T ss_dssp CCCCEEESCSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCC
T ss_pred ccCccccCCccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhc
Confidence 45666677777665 3478899999999999999999999999999999999999999999999 67999999988765
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-ccCCCC---CCCeEEEEcchHHHHhc---c
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFS---DPRLELVINDARAELES---R 172 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~-~~~~~~---~~rv~~~~~Da~~~l~~---~ 172 (297)
+ +|++||+||+|+|++++++++++ ..+|++|||||+|+++|++||+. .+..++ ++|++++++||+.|++. .
T Consensus 204 ~-~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 Y-TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp C-TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred C-CCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 4 58999999999999999999986 48999999999999999999974 333333 46799999999999974 4
Q ss_pred CCCceEEEEcCCCCCC-C---CCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 173 KESYDVIIGDLADPIE-G---GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~-~---~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
.++||+||+|++++.. . ++...|++++||+. ++++|+|||++++|.++| +. .+.++.+.++++++|+.+..+
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~-~~~~L~p~GVlv~Q~~s~--~~-~~~~~~i~~tl~~vF~~v~~~ 357 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL-SMKVLKQDGKYFTQGNCV--NL-TEALSLYEEQLGRLYCPVEFS 357 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH-HHHTEEEEEEEEEEEEET--TC-HHHHHHHHHHHTTSSSCEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHH-HHHhcCCCCEEEEecCCC--cc-hhHHHHHHHHHHHhCCcceEe
Confidence 5789999999986432 2 23457899999999 799999999999998776 33 467789999999999987643
Q ss_pred --EEecCccCCceeEEEEecCC
Q 022451 249 --SAHIPSFADTWGWIMVSIYN 268 (297)
Q Consensus 249 --~~~vp~~~~~~~~~~as~~~ 268 (297)
.+.+|+|++.|+|++|||+.
T Consensus 358 ~~~~~VPSy~~~W~F~~aSK~~ 379 (381)
T 3c6k_A 358 KEIVCVPSYLELWVFYTVWKKA 379 (381)
T ss_dssp EEEECCGGGSSCEEEEEEEECC
T ss_pred eEEEEecCCCCceeeeEEECCC
Confidence 47899998889999999976
No 5
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=4.9e-42 Score=312.67 Aligned_cols=258 Identities=30% Similarity=0.533 Sum_probs=220.8
Q ss_pred cceEEee--eccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeE
Q 022451 29 SCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (297)
Q Consensus 29 ~~w~~~~--~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~V 106 (297)
+.|++|. ..++.+.++++.++|++++|+||+|.|+++..+|++|++||.+|+++++++.|++++.+++++.++++++|
T Consensus 3 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 82 (283)
T 2i7c_A 3 KKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNV 82 (283)
T ss_dssp CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEE
T ss_pred ceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeE
Confidence 5799998 55889999999999999999999999999998899999999999999999999999999998888889999
Q ss_pred EEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCC
Q 022451 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (297)
Q Consensus 107 L~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~ 186 (297)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++..+..++++|++++.+|+++++....++||+|++|++++
T Consensus 83 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~ 162 (283)
T 2i7c_A 83 LVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDP 162 (283)
T ss_dssp EEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCT
T ss_pred EEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCC
Confidence 99999999999999998777899999999999999999987432223478999999999999876678899999999887
Q ss_pred CCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCC-ceeEEEEe
Q 022451 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFAD-TWGWIMVS 265 (297)
Q Consensus 187 ~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~-~~~~~~as 265 (297)
. .+...+++.+|++. ++++|+|||+++++..++ +...+....+.++++++|+.+.++...+|+|++ .|+|++||
T Consensus 163 ~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s 237 (283)
T 2i7c_A 163 I--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCS 237 (283)
T ss_dssp T--TGGGGGSSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEE
T ss_pred C--CcchhhhHHHHHHH-HHHhcCCCcEEEEECCCc--ccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEe
Confidence 6 55568889999999 899999999999998766 567778899999999999999999999999964 46999999
Q ss_pred cCCCC-CCcccccccccccCCCCCCcccCCC
Q 022451 266 IYNPH-SHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 266 ~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+.+.. .++++.+.+... ...+|||+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 264 (283)
T 2i7c_A 238 KTDTGLTKPNKKLESKEF----ADLKYYNYE 264 (283)
T ss_dssp SSTTCSSSCSSCCCSGGG----TTCSSCCHH
T ss_pred CCCccccCchhhhhhhhh----hcCceECHH
Confidence 87322 244443332211 123899874
No 6
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=4.1e-41 Score=306.16 Aligned_cols=256 Identities=31% Similarity=0.585 Sum_probs=214.4
Q ss_pred cceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEE
Q 022451 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (297)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~ 108 (297)
++|++|..+++.+.++++.++|++++|+||+|.|+++..+|+.|++||..|+++++++.|+|+|.+++++.++.+++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLd 81 (281)
T 1mjf_A 2 ERAFIEWYPRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLV 81 (281)
T ss_dssp --CEEEEEGGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred CccEEEecCCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEE
Confidence 57999999899999999999999999999999999999889999999999999999999999999988877888999999
Q ss_pred EccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCC-------CCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-------SDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 109 iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~-------~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
||||+|.++++++++ +..+|++||+||.+++.|++++ .....+ .+++++++.+|+++++.. .++||+|++
T Consensus 82 iG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~ 158 (281)
T 1mjf_A 82 IGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIA 158 (281)
T ss_dssp EECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEE
T ss_pred EcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEE
Confidence 999999999999998 7789999999999999999998 221122 468999999999999876 678999999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCCceeE
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGW 261 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~~ 261 (297)
|+++|. .+...+++.+|++. ++++|+|||+++++.++| +...+..+.+.++++++|+.+..+...+|++++.|+|
T Consensus 159 d~~~~~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~ 233 (281)
T 1mjf_A 159 DSTDPV--GPAKVLFSEEFYRY-VYDALNNPGIYVTQAGSV--YLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAF 233 (281)
T ss_dssp ECCCCC-------TTSHHHHHH-HHHHEEEEEEEEEEEEET--TTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEE
T ss_pred CCCCCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEE
Confidence 999876 44467888999999 899999999999997665 5567788999999999999999999999999777999
Q ss_pred EEEecCCCCCCcccccccccccCCCCCCcccCCCCC
Q 022451 262 IMVSIYNPHSHSILSLSYFENLDSSRPNSFTSPINH 297 (297)
Q Consensus 262 ~~as~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 297 (297)
++||+.+ .++. .+.... .+ +...+|||+--|
T Consensus 234 ~~as~~~--~~~~-~~~~~~-~~-~~~~~~~~~~~~ 264 (281)
T 1mjf_A 234 LVGVKGD--IDFT-KIDRER-AK-KLQLEYYDPLMH 264 (281)
T ss_dssp EEEEESS--CCTT-CCCHHH-HH-TSCCSSCCGGGG
T ss_pred EEeeCCC--CCcc-ccchhh-hh-ccCCcEECHHHH
Confidence 9999874 2222 122111 01 146789987544
No 7
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=2.2e-41 Score=311.36 Aligned_cols=267 Identities=28% Similarity=0.562 Sum_probs=213.8
Q ss_pred ccCCccccceEEeeec--cccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhc
Q 022451 22 ALTGYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLH 99 (297)
Q Consensus 22 ~~~~~~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~ 99 (297)
..+....+.|++|..+ ++.+.++++.++|++++|+||+|.|+++..+|++|++||.+|+++++++.|++++.+++++.
T Consensus 13 ~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~~ 92 (304)
T 2o07_A 13 SGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCS 92 (304)
T ss_dssp -----CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTT
T ss_pred CCCcccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHhh
Confidence 3455567889999754 78899999999999999999999999999999999999999999999999999999988887
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
++.+++||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....++++|++++.+|+++++....++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 88899999999999999999999877789999999999999999998642112346899999999999997767889999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccC-Cc
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFA-DT 258 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~-~~ 258 (297)
++|++++. .+...+++.+||+. ++++|+|||+++++..++ |......+.+.++++++|+.+..+...+|+|+ +.
T Consensus 173 i~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~ 247 (304)
T 2o07_A 173 ITDSSDPM--GPAESLFKESYYQL-MKTALKEDGVLCCQGECQ--WLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQ 247 (304)
T ss_dssp EEECC-------------CHHHHH-HHHHEEEEEEEEEEEECT--TTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGE
T ss_pred EECCCCCC--CcchhhhHHHHHHH-HHhccCCCeEEEEecCCc--ccchHHHHHHHHHHHHhCCCceeEEEEeccccCcc
Confidence 99998776 44456788899999 899999999999997665 56667788999999999999998888999995 45
Q ss_pred eeEEEEecCCCC--CCcccccccccccCCCCCCcccCCC
Q 022451 259 WGWIMVSIYNPH--SHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 259 ~~~~~as~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
|+|++|++.+.. .+++..+++... ....++|||+-
T Consensus 248 ~g~~~as~~~~~~~~~~~~~~~~~~~--~~~~~~~y~~~ 284 (304)
T 2o07_A 248 IGFMLCSKNPSTNFQEPVQPLTQQQV--AQMQLKYYNSD 284 (304)
T ss_dssp EEEEEEESSTTCCSSSCSSCCCHHHH--HHTTCSSCCHH
T ss_pred eEEEEEeCCcccccccchhhhhHhhh--cccCCeEECHH
Confidence 899999988532 334433432111 01467999874
No 8
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=4e-41 Score=310.93 Aligned_cols=253 Identities=30% Similarity=0.589 Sum_probs=204.5
Q ss_pred eccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEEEccchhH
Q 022451 36 IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS 115 (297)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~ 115 (297)
..++...++++.++|++++|+||+|.|+++..+|+.|++||.+|+++++++.|++++++++++.++.+++||+||||+|.
T Consensus 42 ~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~ 121 (314)
T 2b2c_A 42 AWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGG 121 (314)
T ss_dssp CCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSH
T ss_pred cCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCH
Confidence 45788888999999999999999999999999999999999999999999999999999988878889999999999999
Q ss_pred HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCCCCCccCc
Q 022451 116 TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKL 195 (297)
Q Consensus 116 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L 195 (297)
++++++++.+..+|++||+|+.+++.|+++++.....+.++|++++.+|+++++....++||+|++|+++|. .+...+
T Consensus 122 ~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~--~~~~~l 199 (314)
T 2b2c_A 122 ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV--GPAESL 199 (314)
T ss_dssp HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC--Ccchhh
Confidence 999999987778999999999999999999864211234689999999999998766678999999998776 454678
Q ss_pred ccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCC-ceeEEEEecCCCC--CC
Q 022451 196 YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFAD-TWGWIMVSIYNPH--SH 272 (297)
Q Consensus 196 ~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~-~~~~~~as~~~~~--~~ 272 (297)
++.+|++. ++++|+|||+++++.+++ +...+..+.+.++++++|+.+..+...+|+|++ .|+|++|++.+.. .+
T Consensus 200 ~t~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~~~~~~~~ 276 (314)
T 2b2c_A 200 FGQSYYEL-LRDALKEDGILSSQGESV--WLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKNANRDVTT 276 (314)
T ss_dssp ----HHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESSTTCCTTS
T ss_pred hHHHHHHH-HHhhcCCCeEEEEECCCc--ccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCCCcccccC
Confidence 88999999 899999999999998766 567778899999999999999999999999964 4699999988432 34
Q ss_pred cccccccccccCCCCCCcccCCC
Q 022451 273 SILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 273 ~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+++.+...+. .....+|||+-
T Consensus 277 ~~~~~~~~~~--~~~~~~yy~~~ 297 (314)
T 2b2c_A 277 PARTLTAEQI--KALNLRFYNSE 297 (314)
T ss_dssp CSSCCCHHHH--HHTTCSSCCHH
T ss_pred chhhhhHHhh--cccCCeEECHH
Confidence 4443322211 11267899874
No 9
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=8.2e-41 Score=306.47 Aligned_cols=238 Identities=32% Similarity=0.630 Sum_probs=205.5
Q ss_pred cccceEEeeec-cccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCe
Q 022451 27 RKSCWYEEEIE-ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKT 105 (297)
Q Consensus 27 ~~~~w~~~~~~-~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~ 105 (297)
..+.|++|..+ ++.+.++.+.++|++++|+||+|.|+++..+|+.|++||.+|+++++++.|+|++.+++++.++.+++
T Consensus 14 ~~~~w~~e~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~ 93 (296)
T 1inl_A 14 RQHLWYFEYYTGNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKK 93 (296)
T ss_dssp CSSEEEEEECTTSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCceEEEecCCCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCE
Confidence 55689999987 89999999999999999999999999999999999999999999999999999999998887888999
Q ss_pred EEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCC
Q 022451 106 IFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (297)
Q Consensus 106 VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~ 185 (297)
||+||||+|.++++++++.+..+|++||+|+.+++.|++++......+++++++++.+|+++++....++||+|++|+++
T Consensus 94 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 173 (296)
T 1inl_A 94 VLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTD 173 (296)
T ss_dssp EEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCC
Confidence 99999999999999999867789999999999999999998531112346899999999999987666789999999988
Q ss_pred CCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCcc-CCceeEEEE
Q 022451 186 PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSF-ADTWGWIMV 264 (297)
Q Consensus 186 ~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~-~~~~~~~~a 264 (297)
++. ++...+++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+.+.+|...+|+| ++.|+|++|
T Consensus 174 ~~~-~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~a 249 (296)
T 1inl_A 174 PTA-GQGGHLFTEEFYQA-CYDALKEDGVFSAETEDP--FYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFA 249 (296)
T ss_dssp ---------CCSHHHHHH-HHHHEEEEEEEEEECCCT--TTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEE
T ss_pred ccc-CchhhhhHHHHHHH-HHHhcCCCcEEEEEccCc--ccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEe
Confidence 732 44567889999999 899999999999998766 5567788999999999999999999999999 467999999
Q ss_pred ecCC
Q 022451 265 SIYN 268 (297)
Q Consensus 265 s~~~ 268 (297)
|+..
T Consensus 250 s~~~ 253 (296)
T 1inl_A 250 SKGI 253 (296)
T ss_dssp ESSC
T ss_pred cCCC
Confidence 9874
No 10
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=6.2e-41 Score=309.65 Aligned_cols=238 Identities=45% Similarity=0.768 Sum_probs=209.9
Q ss_pred ccceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEE
Q 022451 28 KSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIF 107 (297)
Q Consensus 28 ~~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL 107 (297)
.+.|++|..+++.+.++++.++|++++|+||+|.|+++..+|++|++||..|+++.+++.|+++|.|++++.++.+++||
T Consensus 3 ~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VL 82 (314)
T 1uir_A 3 YGMYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVL 82 (314)
T ss_dssp SSCEEEEESSSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred CCceEEEEcCCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeEE
Confidence 46899999889999999999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-ccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCC
Q 022451 108 IMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (297)
Q Consensus 108 ~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~-~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~ 186 (297)
+||||+|.++++++++.+..+|++||+|+.+++.|+++++. +...+++++++++.+|+++++....++||+|++|++++
T Consensus 83 diG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~ 162 (314)
T 1uir_A 83 IVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDP 162 (314)
T ss_dssp EEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCC
T ss_pred EEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCc
Confidence 99999999999999987778999999999999999999863 22113468999999999999876678899999999876
Q ss_pred C-CCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCc-CCchHHHHHHHHHHhhCCceeEEEEecCccCCceeEEEE
Q 022451 187 I-EGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF-SHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMV 264 (297)
Q Consensus 187 ~-~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~-~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~~~~a 264 (297)
. ..++...+++.+|++. ++++|+|||+++++..+| + .+.+.++.+.++++++|+.+..+...+|++++.|.|++|
T Consensus 163 ~~~~~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~a 239 (314)
T 1uir_A 163 VGEDNPARLLYTVEFYRL-VKAHLNPGGVMGMQTGMI--LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLA 239 (314)
T ss_dssp BSTTCGGGGGSSHHHHHH-HHHTEEEEEEEEEEEEEE--CC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEE
T ss_pred ccccCcchhccHHHHHHH-HHHhcCCCcEEEEEccCc--cccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEE
Confidence 5 2234467889999999 899999999999997655 3 345778999999999999999999999999777999999
Q ss_pred ecCC
Q 022451 265 SIYN 268 (297)
Q Consensus 265 s~~~ 268 (297)
|+..
T Consensus 240 s~~~ 243 (314)
T 1uir_A 240 SDAF 243 (314)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 9874
No 11
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=9.4e-40 Score=302.69 Aligned_cols=238 Identities=32% Similarity=0.588 Sum_probs=210.8
Q ss_pred cccceEEeeec--cccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCC
Q 022451 27 RKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPK 104 (297)
Q Consensus 27 ~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~ 104 (297)
....|++|..+ ++.+.++.+.++|++++|+||+|.|+++..+|+.|++||.+|+++++++.|+|++++++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 35789999887 8899999999999999999999999999988999999999999999999999999998888788899
Q ss_pred eEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCC
Q 022451 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (297)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~ 184 (297)
+||+||||+|.++++++++.+..+|++||+|+.+++.|++++......+++++++++.+|+++++...+++||+|++|++
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 198 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc
Confidence 99999999999999999987778999999999999999999864211234689999999999998766678999999998
Q ss_pred CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccC-CceeEEE
Q 022451 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFA-DTWGWIM 263 (297)
Q Consensus 185 ~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~-~~~~~~~ 263 (297)
+|. .+...+++.+|++. ++++|+|||+++++..++ +.+.+.++.+.++++++|+.+.+|...+|+|+ +.|+|++
T Consensus 199 ~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 199 DPI--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp CSS--SGGGGGSSHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred CCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 776 45567888999999 899999999999997665 55677889999999999999999999999995 4699999
Q ss_pred EecCCC
Q 022451 264 VSIYNP 269 (297)
Q Consensus 264 as~~~~ 269 (297)
||+.+.
T Consensus 274 as~~~~ 279 (321)
T 2pt6_A 274 CSKTDT 279 (321)
T ss_dssp EESSTT
T ss_pred eeCCCC
Confidence 998753
No 12
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=3.6e-39 Score=296.53 Aligned_cols=263 Identities=29% Similarity=0.533 Sum_probs=214.3
Q ss_pred CccccceEEeeec--cccccccccccEEEEeeCCCCcEEEEEeC---CceeEEEEcCccccccCChhhHHHHHHHHHHhc
Q 022451 25 GYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTK---PFGKALVIDGKLQSAEVDEFIYHESLVHPALLH 99 (297)
Q Consensus 25 ~~~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~V~~~~---~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~ 99 (297)
....++|++|..+ ++...++++.+++++.+|+||+|.|+++. .+|+.|++||.+|+++.+++.|++++.++++..
T Consensus 13 ~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~ 92 (304)
T 3bwc_A 13 ELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCS 92 (304)
T ss_dssp CCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHTT
T ss_pred ccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhhc
Confidence 3455789999887 88899999999999999999999999998 789999999999999999999999999988887
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~ 178 (297)
++++++||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.++|++++.+|+.+++.. .+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 888999999999999999999998777899999999999999999985311113568999999999999865 4678999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCcc-C
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSF-A 256 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~-~ 256 (297)
|++|.+++. .|...|++.+|++. ++++|+|||+++++..+| +......+.+.++++++ |+.+..+...+|+| +
T Consensus 173 Ii~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~ 247 (304)
T 3bwc_A 173 VIIDTTDPA--GPASKLFGEAFYKD-VLRILKPDGICCNQGESI--WLDLELIEKMSRFIRETGFASVQYALMHVPTYPC 247 (304)
T ss_dssp EEEECC-----------CCHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTT
T ss_pred EEECCCCcc--ccchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--ccchHHHHHHHHHHHhCCCCcEEEEEeecccccC
Confidence 999998876 45568889999999 899999999999997665 55667788999999999 99999998899999 4
Q ss_pred CceeEEEEecCCCC--CCcccccccccccCCCCCCcccCCC
Q 022451 257 DTWGWIMVSIYNPH--SHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 257 ~~~~~~~as~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+.|+|++||+.+.. .+++..+.. +.+.. .++|||+-
T Consensus 248 g~w~f~~as~~~~~~~~~~~~~~~~-~~~~~--~~~~y~~~ 285 (304)
T 3bwc_A 248 GSIGTLVCSKKAGVDVTKPLRPVED-MPFAK--DLKYYDSE 285 (304)
T ss_dssp SCCEEEEEESSSSCCTTSCSSCGGG-SGGGG--GCSSCCHH
T ss_pred cceEEEEEeCCccccccChhhhhhh-hhhcc--CCeEECHH
Confidence 67999999998532 233221211 11111 57899863
No 13
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=2.3e-39 Score=301.92 Aligned_cols=223 Identities=25% Similarity=0.449 Sum_probs=188.7
Q ss_pred cccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEEEccchhHHH
Q 022451 38 ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTA 117 (297)
Q Consensus 38 ~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~~~ 117 (297)
.+...+++++++|++++|+||+|.|+++..+|++|++||.+|++++| +.|||+|+++++ .+++|++||+||+|+|+++
T Consensus 126 ~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~a 203 (364)
T 2qfm_A 126 DGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGGDGGIL 203 (364)
T ss_dssp TCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECTTCHHH
T ss_pred CCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECChhHHH
Confidence 46677888999999999999999999999999999999999999999 999999998877 6789999999999999999
Q ss_pred HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCC---CeEEEEcchHHHHhc---cCCCceEEEEcCCC-CCCC
Q 022451 118 REILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDP---RLELVINDARAELES---RKESYDVIIGDLAD-PIEG 189 (297)
Q Consensus 118 ~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~~---rv~~~~~Da~~~l~~---~~~~yD~Ii~D~~~-~~~~ 189 (297)
++++++.+ .+|++||+||.++++||++|+.. ...+++| |++++++|+++|++. .+++||+||+|+++ |...
T Consensus 204 rellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~ 282 (364)
T 2qfm_A 204 CEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST 282 (364)
T ss_dssp HHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC
T ss_pred HHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCc
Confidence 99999864 89999999999999999998732 2234554 899999999999975 46789999999998 7543
Q ss_pred CCccCcccHHHHHHHH----cccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE--EEEecCccCCceeEEE
Q 022451 190 GPCYKLYTKSFYEFVV----KPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP--YSAHIPSFADTWGWIM 263 (297)
Q Consensus 190 ~p~~~L~t~ef~~~~~----~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~--~~~~vp~~~~~~~~~~ 263 (297)
.| ..|++.+||+. + +++|+|||+++++.+++. . .+....+.+.+++.|+.|.. |.+.+|+|++.|.|..
T Consensus 283 ~p-~~L~t~eFy~~-~~~~~~~~L~pgGilv~qs~s~~--~-~e~~~~~~~~l~~~F~~v~~~~~~~~vPsy~~~w~f~~ 357 (364)
T 2qfm_A 283 SP-EEDSTWEFLRL-ILDLSMKVLKQDGKYFTQGNCVN--L-TEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYT 357 (364)
T ss_dssp C-----CHHHHHHH-HHHHHHHTEEEEEEEEEEEEETT--C-HHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEE
T ss_pred Cc-hhhhHHHHHHH-HHHHHHhhCCCCcEEEEEcCCcc--h-HHHHHHHHHHHHHhCCceEEeeEeeecCCchhheEeEE
Confidence 45 35899999999 6 899999999999987652 2 33433333459999999988 8899999988999999
Q ss_pred EecCC
Q 022451 264 VSIYN 268 (297)
Q Consensus 264 as~~~ 268 (297)
|+|+.
T Consensus 358 ~~k~~ 362 (364)
T 2qfm_A 358 VWKKA 362 (364)
T ss_dssp EEECC
T ss_pred eeccc
Confidence 99874
No 14
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=9.9e-39 Score=297.23 Aligned_cols=263 Identities=32% Similarity=0.597 Sum_probs=218.2
Q ss_pred cccceEEeee--ccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCC
Q 022451 27 RKSCWYEEEI--EENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPK 104 (297)
Q Consensus 27 ~~~~w~~~~~--~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~ 104 (297)
..++|++|.. .++.+.+|++.++|++++++||+|.|+++..+|+.|++||.+|+++++++.|++++++++++.++.++
T Consensus 43 ~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~ 122 (334)
T 1xj5_A 43 VIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPK 122 (334)
T ss_dssp CCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCC
T ss_pred cccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCC
Confidence 3578999874 47889999999999999999999999999999999999999999999999999999999888788899
Q ss_pred eEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEEEEcC
Q 022451 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDL 183 (297)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~Ii~D~ 183 (297)
+||+||||+|.++++++++.+..+|++||+|+.+++.|++++......+.+++++++.+|+.+++... .++||+|++|+
T Consensus 123 ~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~ 202 (334)
T 1xj5_A 123 KVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDS 202 (334)
T ss_dssp EEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECC
T ss_pred EEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECC
Confidence 99999999999999999987778999999999999999999864211234689999999999998653 46899999999
Q ss_pred CCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCc-eeEEEEecCccC-CceeE
Q 022451 184 ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKY-VVPYSAHIPSFA-DTWGW 261 (297)
Q Consensus 184 ~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~-v~~~~~~vp~~~-~~~~~ 261 (297)
++|. .+...+++.+|++. ++++|+|||+++++..++ |........+.++++++|+. +..+...+|+|. +.|+|
T Consensus 203 ~~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf 277 (334)
T 1xj5_A 203 SDPI--GPAKELFEKPFFQS-VARALRPGGVVCTQAESL--WLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGF 277 (334)
T ss_dssp CCTT--SGGGGGGSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEE
T ss_pred CCcc--CcchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--cccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEE
Confidence 8776 34456778999999 899999999999997665 66667778888999999995 444457899995 56999
Q ss_pred EEEecCCC---CCCcccccccccccCCCCCCcccCCC
Q 022451 262 IMVSIYNP---HSHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 262 ~~as~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
++||+..+ ..+++..+.+... +....++|||+-
T Consensus 278 ~~as~~~~~~~~~~~~~~~~~~~~-~~~~~~~yy~~~ 313 (334)
T 1xj5_A 278 MLCSTEGPDVDFKHPLNPIDESSS-KSNGPLKFYNAE 313 (334)
T ss_dssp EEEECSSSCCCSSSCSSCCCSGGG-TTTCCCSSCCHH
T ss_pred EEcccCCccccccCchhhhhhhhh-cccCCceEECHH
Confidence 99998743 2345444432222 234577999874
No 15
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=8e-40 Score=295.04 Aligned_cols=240 Identities=16% Similarity=0.228 Sum_probs=203.6
Q ss_pred ceEEeeeccccccccccccEEEEeeCCCCcEEEEEeCCceeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEEE
Q 022451 30 CWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIM 109 (297)
Q Consensus 30 ~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~V~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~i 109 (297)
+|++|..+++.+.++++.++|++++|+||+|.|++++.+|++|++||. |+++.+++.|++++.+++++.++.+++||+|
T Consensus 1 ~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~i 79 (262)
T 2cmg_A 1 MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIV 79 (262)
T ss_dssp CEEEEEEETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred CcEEEEcCCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEE
Confidence 599999889999999999999999999999999999999999999999 9999999999999999998888889999999
Q ss_pred ccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCCC
Q 022451 110 GGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEG 189 (297)
Q Consensus 110 G~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~ 189 (297)
|||+|.++++++++ + .+|++||+|+.+++.|+++++.....+.++|++++.+|+++++ ++||+|++|+++|.
T Consensus 80 G~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~dp~-- 151 (262)
T 2cmg_A 80 DGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEPDI-- 151 (262)
T ss_dssp SSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSCCCH--
T ss_pred eCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCCChH--
Confidence 99999999999998 7 8999999999999999999863211234689999999999886 67999999976432
Q ss_pred CCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCCceeEEEEecCCC
Q 022451 190 GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMVSIYNP 269 (297)
Q Consensus 190 ~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~~~~as~~~~ 269 (297)
.||+. ++++|+|||+++++.++| +.....++.+.++++++|+.+.++...+|+ .+.|.|++||+...
T Consensus 152 ---------~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~-~g~~~~~~as~~~~ 218 (262)
T 2cmg_A 152 ---------HRIDG-LKRMLKEDGVFISVAKHP--LLEHVSMQNALKNMGGVFSVAMPFVAPLRI-LSNKGYIYASFKTH 218 (262)
T ss_dssp ---------HHHHH-HHTTEEEEEEEEEEEECT--TTCHHHHHHHHHHHHTTCSEEEEECCTTCT-TCCEEEEEEESSCC
T ss_pred ---------HHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHhCCceEEEEEccCC-CcccEEEEeeCCCC
Confidence 38999 799999999999987666 445567889999999999999999888999 77799999998853
Q ss_pred CCCcccccccccccCCCCCCcccCCC
Q 022451 270 HSHSILSLSYFENLDSSRPNSFTSPI 295 (297)
Q Consensus 270 ~~~~i~~~~~~~~~~~~~~~~~~~~~ 295 (297)
+ ++.+++.+ .+.....+|||+-
T Consensus 219 p---~~~~~~~~-~~~~~~~~~y~~~ 240 (262)
T 2cmg_A 219 P---LKDLMTPK-IEALTSVRYYNED 240 (262)
T ss_dssp T---TTTCCHHH-HTTCCSCSSCCHH
T ss_pred c---hhhcCHhH-hhccCCCcEECHH
Confidence 3 22222211 2222467899874
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.4e-32 Score=253.11 Aligned_cols=207 Identities=23% Similarity=0.243 Sum_probs=173.5
Q ss_pred CCCCcEEEEEeCC--ceeEEEEcCcccccc------CChhhHHHHHHHHHHh---cCCCCC--eEEEEccchhHHHHHHH
Q 022451 55 TRYQDIALLDTKP--FGKALVIDGKLQSAE------VDEFIYHESLVHPALL---HHPNPK--TIFIMGGGEGSTAREIL 121 (297)
Q Consensus 55 s~~~~i~V~~~~~--~g~~L~ldg~~q~~~------~d~~~y~e~l~~~~l~---~~~~~~--~VL~iG~G~G~~~~~l~ 121 (297)
..|...+|..... +|++|++||..|+++ .+++.|+|+|+|++++ .++.++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 4455688887653 799999999999974 5789999999998886 467766 99999999999999999
Q ss_pred hcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEEEEcCCCCCCCCCccCcccHHH
Q 022451 122 RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSF 200 (297)
Q Consensus 122 ~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~Ii~D~~~~~~~~p~~~L~t~ef 200 (297)
++.+..+|++||+|+.|++.||++|... .++|++++++|+++++... .++||+|++|++++. .+...|++.+|
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t~ef 182 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA--ITPQNFTTVEF 182 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSBHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc--ccchhhhHHHH
Confidence 9656679999999999999999999764 3689999999999999764 578999999998876 33468999999
Q ss_pred HHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCC--ceeEEEEecCCCCC
Q 022451 201 YEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFAD--TWGWIMVSIYNPHS 271 (297)
Q Consensus 201 ~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~--~~~~~~as~~~~~~ 271 (297)
|+. ++++|+|||+|++|..++ .....++.++++++++|+++..|....|.++. +|.+++||+.+.+.
T Consensus 183 l~~-~~r~LkpgGvlv~~~~~~---~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~ 251 (317)
T 3gjy_A 183 FEH-CHRGLAPGGLYVANCGDH---SDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDTEFFS 251 (317)
T ss_dssp HHH-HHHHEEEEEEEEEEEEEC---TTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESSCCCC
T ss_pred HHH-HHHhcCCCcEEEEEecCC---cchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECCCCCc
Confidence 999 799999999999998532 23467789999999999999988766666653 35569999988664
No 17
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=2.4e-14 Score=126.92 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=87.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccC--CCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK--ESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~--~~yD 177 (297)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ -.++++++.+|+.+++.... ++||
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG---VDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 4678999999999999999998755 6899999999999999999986543 13689999999999886543 4899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++|...+ ....+++. +.+.|+|||++++..
T Consensus 139 ~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 139 LIFIDADKP---------NNPHYLRW-ALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEEC
T ss_pred EEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEeC
Confidence 999986421 12468898 799999999998864
No 18
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.58 E-value=2e-14 Score=127.60 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=86.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc------C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~------~ 173 (297)
..+++||+||||+|..+..+++..+ ..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+++... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG---VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 4678999999999999999998644 6899999999999999999987542 1368999999999887542 5
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 155 ~~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADKD---------NYLNYHKR-LIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCST---------THHHHHHH-HHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCchH---------HHHHHHHH-HHHhCCCCeEEEEe
Confidence 7899999996421 13478898 79999999999875
No 19
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=3.1e-14 Score=124.82 Aligned_cols=105 Identities=22% Similarity=0.397 Sum_probs=87.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-ccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~-~~~~~yD~I 179 (297)
.++++||+||||+|..+..+++..+..+|++||+++.+++.|++++...+ -.++++++.+|+.+++. ...++||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH---FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 46789999999999999999986667899999999999999999986542 13589999999998876 546789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++|...+ . ..++++. +.+.|+|||++++.
T Consensus 147 ~~~~~~~-------~--~~~~l~~-~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA-------Q--SKKFFEI-YTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS-------S--HHHHHHH-HGGGEEEEEEEEEE
T ss_pred EEcCcHH-------H--HHHHHHH-HHHhcCCCeEEEEe
Confidence 9996421 1 3478898 79999999999884
No 20
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.58 E-value=2.5e-14 Score=123.08 Aligned_cols=150 Identities=17% Similarity=0.193 Sum_probs=102.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++....+ ||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG---LIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS---GGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCceEEEEEecHHHHhccCCC-CCEE
Confidence 3678999999999999999998754 6899999999999999999886432 135899999999988765556 9999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC-CCCcC---CchHHHHHHHHHHhhCCceeEEEEecCcc
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP-AGIFS---HTEVFSCIYNTLRQVFKYVVPYSAHIPSF 255 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~-p~~~~---~~~~~~~i~~~l~~~F~~v~~~~~~vp~~ 255 (297)
++|.... ....+++. +.+.|+|||++++.... .+... ..+..+.+...+...+.+.......+|..
T Consensus 131 ~~~~~~~---------~~~~~l~~-~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~ 200 (210)
T 3c3p_A 131 FMDCDVF---------NGADVLER-MNRCLAKNALLIAVNALRRGSVAESHEDPETAALREFNHHLSRRRDFFTTIVPVG 200 (210)
T ss_dssp EEETTTS---------CHHHHHHH-HGGGEEEEEEEEEESSSSCC------------CCCHHHHHHTTCTTEEEEEECST
T ss_pred EEcCChh---------hhHHHHHH-HHHhcCCCeEEEEECccccCcccCcccchHHHHHHHHHHHHhhCCCeEEEEEecC
Confidence 9995321 13578998 79999999999885321 00000 11111222333444444433334455642
Q ss_pred CCceeEEEEecC
Q 022451 256 ADTWGWIMVSIY 267 (297)
Q Consensus 256 ~~~~~~~~as~~ 267 (297)
+++.++.|+
T Consensus 201 ---~G~~~~~~~ 209 (210)
T 3c3p_A 201 ---NGVLLGYRL 209 (210)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CceEEEEeC
Confidence 467777765
No 21
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.57 E-value=6.3e-14 Score=118.55 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=86.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~I 179 (297)
.++++|||+|||+|.++..+++. +..+|++||+|+.+++.|++++...+ -++++++.+|+.+++... .++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhccCCCccEE
Confidence 46789999999999999988875 46789999999999999999987553 268999999999987543 5789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcc--cCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKP--RLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~--~L~pgGvl~~~~~ 220 (297)
++|++-.. . .-...++++. +.+ .|+|||++++...
T Consensus 118 ~~~~p~~~--~---~~~~~~~l~~-~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNV--D---SADVDAILAA-LGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTS--C---HHHHHHHHHH-HHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCc--c---hhhHHHHHHH-HHhcCccCCCeEEEEEec
Confidence 99976322 1 0113467777 677 9999999999863
No 22
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.57 E-value=6.6e-14 Score=122.30 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=85.8
Q ss_pred CeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEEEE
Q 022451 104 KTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIG 181 (297)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~Ii~ 181 (297)
.+||+||||+|..+..+++. ++..+|++||+|+.+++.|++++...+ +.+++++++.+|+.+++... +++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 39999999999999999885 446899999999999999999987543 12268999999999998664 578999999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|...+. ..++++. +.+.|+|||++++..
T Consensus 136 d~~~~~---------~~~~l~~-~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSPMD---------LKALVDA-AWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCTTT---------HHHHHHH-HHHHEEEEEEEEETT
T ss_pred cCcHHH---------HHHHHHH-HHHHcCCCcEEEEeC
Confidence 964211 2368998 799999999999863
No 23
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=3e-14 Score=125.54 Aligned_cols=151 Identities=16% Similarity=0.119 Sum_probs=105.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc------C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~------~ 173 (297)
.++++||+||||+|..+..+++..+ ..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+++... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG---VEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 5678999999999999999998644 6899999999999999999987542 1368999999999887542 4
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC-CC-CcC----Cch----HHHHHHHHHHhhCC
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP-AG-IFS----HTE----VFSCIYNTLRQVFK 243 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~-p~-~~~----~~~----~~~~i~~~l~~~F~ 243 (297)
++||+|++|...+ ...++++. +.+.|+|||++++.... .+ ... ... ..+.+.+..+..+.
T Consensus 146 ~~fD~I~~d~~~~---------~~~~~l~~-~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~ 215 (237)
T 3c3y_A 146 GSYDFGFVDADKP---------NYIKYHER-LMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAA 215 (237)
T ss_dssp TCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhc
Confidence 7899999995311 13578999 79999999999886321 00 000 011 12333344444444
Q ss_pred ceeEEEEecCccCCceeEEEEecC
Q 022451 244 YVVPYSAHIPSFADTWGWIMVSIY 267 (297)
Q Consensus 244 ~v~~~~~~vp~~~~~~~~~~as~~ 267 (297)
+.......+|.. .+++++.++
T Consensus 216 ~~~~~~~~lp~~---dG~~~~~~~ 236 (237)
T 3c3y_A 216 DPRIEIVHLPLG---DGITFCRRL 236 (237)
T ss_dssp CTTEEEEEECST---TCEEEEEEC
T ss_pred CCCeEEEEEEeC---CceEEEEEc
Confidence 444445566763 357777654
No 24
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=1.6e-14 Score=127.16 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=92.4
Q ss_pred hhhHHHHHHHHHHhcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc
Q 022451 85 EFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND 164 (297)
Q Consensus 85 ~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~D 164 (297)
+..|.+.+... ..+++.+||+||||+|..+..++++. ..++++||++|.+++.|++++... ..+++++.+|
T Consensus 46 e~~~m~~~a~~---~~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~ 116 (236)
T 3orh_A 46 ETPYMHALAAA---ASSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGL 116 (236)
T ss_dssp GHHHHHHHHHH---HTTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESC
T ss_pred HHHHHHHHHHh---hccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeeh
Confidence 44455555432 23678899999999999999999875 468999999999999999987643 3678999999
Q ss_pred hHHHHhc-cCCCceEEEEcCCCCCCCCCccCc-ccHHHHHHHHcccCCCCcEEEEe
Q 022451 165 ARAELES-RKESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 165 a~~~l~~-~~~~yD~Ii~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...+.. .++.||.|+.|...... .. .++ ....++++ ++++|||||+|++.
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~~-~~-~~~~~~~~~~~e-~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLSE-ET-WHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBG-GG-TTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred HHhhcccccccCCceEEEeeeeccc-ch-hhhcchhhhhhh-hhheeCCCCEEEEE
Confidence 9887654 45789999999764321 11 122 23467888 79999999999864
No 25
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.54 E-value=1.2e-13 Score=119.53 Aligned_cols=106 Identities=17% Similarity=0.245 Sum_probs=86.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc----CCC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KES 175 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~----~~~ 175 (297)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN---LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 4678999999999999999998755 6799999999999999999986543 2357999999998876531 267
Q ss_pred ceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
||+|++|...+ ....+++. +.+.|+|||++++..
T Consensus 134 fD~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADKQ---------NNPAYFEW-ALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEES
T ss_pred cCEEEEcCCcH---------HHHHHHHH-HHHhcCCCcEEEEeC
Confidence 99999996521 12478898 799999999998863
No 26
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.52 E-value=1.7e-13 Score=118.87 Aligned_cols=108 Identities=12% Similarity=0.166 Sum_probs=85.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccC-----C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----E 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~-----~ 174 (297)
.++++||+||||+|..+..+++.. +..+|++||+++.+++.|++++...+ -.++++++.+|+.+++.... +
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG---LQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC---CCCceEEEECCHHHHHHHHHHhcCCC
Confidence 467899999999999999999853 46899999999999999999987543 13579999999998876543 6
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+||+|++|..... ..-..++++. + +.|+|||++++..
T Consensus 134 ~fD~V~~d~~~~~------~~~~~~~~~~-~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 134 TLDMVFLDHWKDR------YLPDTLLLEK-C-GLLRKGTVLLADN 170 (221)
T ss_dssp CCSEEEECSCGGG------HHHHHHHHHH-T-TCCCTTCEEEESC
T ss_pred ceEEEEEcCCccc------chHHHHHHHh-c-cccCCCeEEEEeC
Confidence 8999999964211 1112356776 5 9999999998864
No 27
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.51 E-value=2.7e-13 Score=119.21 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=105.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD~ 178 (297)
+.+.+|||||||+|..+..++...+..+|++||+++.+++.|++++...+ -++++++.+|+.++... ..++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccCCccE
Confidence 35789999999999999888865567899999999999999999876542 24699999999886421 2468999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFAD 257 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~ 257 (297)
|+++... . -..+++. +.+.|+|||.+++..+.. ..+....+.+.+++. |..........|....
T Consensus 145 V~~~~~~----~------~~~~l~~-~~~~LkpgG~l~~~~g~~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 209 (240)
T 1xdz_A 145 VTARAVA----R------LSVLSEL-CLPLVKKNGLFVALKAAS----AEEELNAGKKAITTLGGELENIHSFKLPIEES 209 (240)
T ss_dssp EEEECCS----C------HHHHHHH-HGGGEEEEEEEEEEECC-----CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCC
T ss_pred EEEeccC----C------HHHHHHH-HHHhcCCCCEEEEEeCCC----chHHHHHHHHHHHHcCCeEeEEEEEecCCCCC
Confidence 9998631 1 2478888 799999999998875421 234455566666654 3322222233554444
Q ss_pred ceeEEEEecCC
Q 022451 258 TWGWIMVSIYN 268 (297)
Q Consensus 258 ~~~~~~as~~~ 268 (297)
.+.++++.+..
T Consensus 210 ~~~l~~~~k~~ 220 (240)
T 1xdz_A 210 DRNIMVIRKIK 220 (240)
T ss_dssp EEEEEEEEECS
T ss_pred ceEEEEEEecC
Confidence 46666666554
No 28
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.4e-13 Score=122.92 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=99.3
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh---ccCCCCCCCeEEEEcchHHHHhc-----
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV---NKEAFSDPRLELVINDARAELES----- 171 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~---~~~~~~~~rv~~~~~Da~~~l~~----- 171 (297)
..++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++.. ++ -.++++++.+|+.+++..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~---l~~~v~~~~~D~~~~~~~~~~~~ 110 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA---FSARIEVLEADVTLRAKARVEAG 110 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT---TGGGEEEEECCTTCCHHHHHHTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC---CcceEEEEeCCHHHHhhhhhhhc
Confidence 3456799999999999999999877678999999999999999998765 32 124799999999877531
Q ss_pred -cCCCceEEEEcCCCCCCCC---C---------ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHH
Q 022451 172 -RKESYDVIIGDLADPIEGG---P---------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTL 238 (297)
Q Consensus 172 -~~~~yD~Ii~D~~~~~~~~---p---------~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l 238 (297)
..++||+|+++++-..... + .....-.++++. +.+.|+|||.+++... ...+..+...+
T Consensus 111 ~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-------~~~~~~~~~~l 182 (260)
T 2ozv_A 111 LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRT-ASAIMVSGGQLSLISR-------PQSVAEIIAAC 182 (260)
T ss_dssp CCTTCEEEEEECCCC---------------------CCHHHHHHH-HHHHEEEEEEEEEEEC-------GGGHHHHHHHH
T ss_pred cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHH-HHHHcCCCCEEEEEEc-------HHHHHHHHHHH
Confidence 2568999999975211000 0 001123578888 7999999999988642 22456677777
Q ss_pred HhhCCceeEE
Q 022451 239 RQVFKYVVPY 248 (297)
Q Consensus 239 ~~~F~~v~~~ 248 (297)
++.|..+...
T Consensus 183 ~~~~~~~~i~ 192 (260)
T 2ozv_A 183 GSRFGGLEIT 192 (260)
T ss_dssp TTTEEEEEEE
T ss_pred HhcCCceEEE
Confidence 7766554433
No 29
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=1.5e-13 Score=119.71 Aligned_cols=128 Identities=15% Similarity=0.211 Sum_probs=99.5
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCceEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVI 179 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD~I 179 (297)
....|||||||+|.++..+++..+..+|++||+++.+++.|+++....+ -++++++.+|+.+++.. .++.||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCCChheE
Confidence 5678999999999999999987777899999999999999999876432 25799999999998653 46789999
Q ss_pred EEcCCCCCCCCC--ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
++..++|+.... ...+...+|++. +.++|+|||++.+.+. .......+...+.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~-~~r~LkpGG~l~i~td------~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAEL-VKSKLQLGGVFHMATD------WEPYAEHMLEVMSS 165 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHT
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHH-HHHHcCCCcEEEEEeC------CHHHHHHHHHHHHh
Confidence 998777763211 123455689999 8999999999998763 23344555555554
No 30
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=6.9e-13 Score=111.11 Aligned_cols=131 Identities=18% Similarity=0.245 Sum_probs=99.3
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+||++|||+|.++..+++. ..+++++|+++.+++.|++++...+ +.+++++++.+|+.+.+. .++||+|
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~~~--~~~~D~v 123 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNN--LDNYDIRVVHSDLYENVK--DRKYNKI 123 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTT--CTTSCEEEEECSTTTTCT--TSCEEEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECchhcccc--cCCceEE
Confidence 356789999999999999999987 5799999999999999999886542 122259999999887543 4689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
+++.+-.. . .-....+++. +.+.|+|||.+++.... ......+.+.+++.|..+..+
T Consensus 124 ~~~~~~~~--~---~~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 124 ITNPPIRA--G---KEVLHRIIEE-GKELLKDNGEIWVVIQT------KQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp EECCCSTT--C---HHHHHHHHHH-HHHHEEEEEEEEEEEES------THHHHHHHHHHHHHHSCCEEE
T ss_pred EECCCccc--c---hhHHHHHHHH-HHHHcCCCCEEEEEECC------CCChHHHHHHHHHHhcceEEE
Confidence 99865321 1 1123478888 79999999999988532 233455777888888877644
No 31
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=6.9e-14 Score=123.80 Aligned_cols=105 Identities=21% Similarity=0.352 Sum_probs=86.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-----CC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-----~~ 174 (297)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++... .+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK---QEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT---CTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 4678999999999999999998643 6899999999999999999987543 2368999999999887653 47
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 136 ~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 136 QFDFIFIDADKT---------NYLNYYEL-ALKLVTPKGLIAID 169 (242)
T ss_dssp CEEEEEEESCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CEeEEEEcCChH---------HhHHHHHH-HHHhcCCCeEEEEE
Confidence 899999996411 12468888 79999999999985
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.51 E-value=2.6e-13 Score=117.51 Aligned_cols=106 Identities=21% Similarity=0.272 Sum_probs=86.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccC-----C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----E 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~-----~ 174 (297)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ -.++++++.+|+.+++.... +
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG---LSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC---CCCceEEEeCCHHHHHHHhhhccCCC
Confidence 4678999999999999999998654 6899999999999999999986543 23679999999988875422 7
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+||+|++|.... ....+++. +.+.|+|||++++..
T Consensus 140 ~fD~v~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 140 QYDLIYIDADKA---------NTDLYYEE-SLKLLREGGLIAVDN 174 (225)
T ss_dssp CEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred CccEEEECCCHH---------HHHHHHHH-HHHhcCCCcEEEEeC
Confidence 899999986411 12468888 799999999998863
No 33
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=9.1e-14 Score=118.56 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=88.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
.++.+|||+|||+|.++..+++..+..+++++|+|+.+++.|++++...+ .+++++.+|+.+.+.. ..++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-----AVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-----CceEEEEcchHhhhhhhhhccCccc
Confidence 57789999999999999999998767799999999999999999876542 2789999999887653 247899
Q ss_pred EEEEcCCCCCCCC------------CccCcc--------cHHHHHHHHcccCCCCcE-EEEecCCCCCcCCchHHHHHHH
Q 022451 178 VIIGDLADPIEGG------------PCYKLY--------TKSFYEFVVKPRLNPEGI-FVTQAGPAGIFSHTEVFSCIYN 236 (297)
Q Consensus 178 ~Ii~D~~~~~~~~------------p~~~L~--------t~ef~~~~~~~~L~pgGv-l~~~~~~p~~~~~~~~~~~i~~ 236 (297)
+|+++++-..... |...+. -..+++. +.+.|+|||+ +++... ....+.+..++.
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL-PPYVLARGRAGVFLEVG----HNQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTC-CGGGBCSSSEEEEEECT----TSCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH-HHHHhcCCCeEEEEEEC----CccHHHHHHHHH
Confidence 9999876311000 000000 0577888 7899999999 666542 223333333333
Q ss_pred HHHhhCCceeEEEEecCccCCceeEEEEecCC
Q 022451 237 TLRQVFKYVVPYSAHIPSFADTWGWIMVSIYN 268 (297)
Q Consensus 237 ~l~~~F~~v~~~~~~vp~~~~~~~~~~as~~~ 268 (297)
.++..|..+..+ +.+.+...++++.+..
T Consensus 179 ~~~~gf~~~~~~----~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 179 PWRERGFRVRKV----KDLRGIDRVIAVTREP 206 (215)
T ss_dssp GGGGGTEECCEE----ECTTSCEEEEEEEECC
T ss_pred HhhcCCceEEEE----EecCCCEEEEEEEEcC
Confidence 233446555433 3344445677777654
No 34
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=4e-13 Score=117.79 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=103.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc---C--C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--E 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~---~--~ 174 (297)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ -.++++++.+|+.+++... + +
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG---VAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3678999999999999999998654 5799999999999999999886432 1357999999998876532 2 6
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCC-CC----cCCchHHHHHHHHHHhhCCceeEEE
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA-GI----FSHTEVFSCIYNTLRQVFKYVVPYS 249 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p-~~----~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (297)
+||+|++|...+ ...++++. +.+.|+|||++++..... +. ....+..+.+.+..+.+..+.....
T Consensus 148 ~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 217 (232)
T 3cbg_A 148 EFDLIFIDADKR---------NYPRYYEI-GLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRI 217 (232)
T ss_dssp CEEEEEECSCGG---------GHHHHHHH-HHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEE
T ss_pred CcCEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEE
Confidence 899999986411 12478898 799999999999863210 00 0012233444444444444433334
Q ss_pred EecCccCCceeEEEEec
Q 022451 250 AHIPSFADTWGWIMVSI 266 (297)
Q Consensus 250 ~~vp~~~~~~~~~~as~ 266 (297)
..+|.. + ++.++.+
T Consensus 218 ~~lp~~-d--G~~~~~~ 231 (232)
T 3cbg_A 218 SVIPLG-D--GMTLALK 231 (232)
T ss_dssp EEECSB-T--CEEEEEE
T ss_pred EEEEcC-C--eEEEEEe
Confidence 455653 2 4666654
No 35
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.49 E-value=8.2e-13 Score=117.43 Aligned_cols=148 Identities=16% Similarity=0.211 Sum_probs=105.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD~ 178 (297)
..+.+|||||||+|..+..++...+..+|++||+++.+++.|+++....+ -.+++++.+|+.++... ..++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCCCceE
Confidence 45789999999999999998887677899999999999999999876542 24699999999887542 2478999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFAD 257 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~ 257 (297)
|++....+ + ..+++. +.+.|+|||.+++..+.. ..+.+..+.+.+.+. |.........+|....
T Consensus 155 I~s~a~~~--------~--~~ll~~-~~~~LkpgG~l~~~~g~~----~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~ 219 (249)
T 3g89_A 155 AVARAVAP--------L--CVLSEL-LLPFLEVGGAAVAMKGPR----VEEELAPLPPALERLGGRLGEVLALQLPLSGE 219 (249)
T ss_dssp EEEESSCC--------H--HHHHHH-HGGGEEEEEEEEEEECSC----CHHHHTTHHHHHHHHTEEEEEEEEEECTTTCC
T ss_pred EEECCcCC--------H--HHHHHH-HHHHcCCCeEEEEEeCCC----cHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCC
Confidence 99976421 1 378888 799999999998765421 233445555555554 3333333345665444
Q ss_pred ceeEEEEecC
Q 022451 258 TWGWIMVSIY 267 (297)
Q Consensus 258 ~~~~~~as~~ 267 (297)
....++..+.
T Consensus 220 ~R~l~~~~k~ 229 (249)
T 3g89_A 220 ARHLVVLEKT 229 (249)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEEeC
Confidence 3445555543
No 36
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.49 E-value=4.3e-13 Score=115.73 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=98.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-ccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~-~~~~~yD~I 179 (297)
.++.+|||||||+|.++..+++..+..++++||+++.+++.|++++...+ -++++++.+|+.++.. -..++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 45778999999999999999987777899999999999999999876542 2689999999987432 235679999
Q ss_pred EEcCCCCCCCCC--ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
+++.++|+.... ...+...++++. +.+.|+|||++++.+. .......+.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~~~~~ 172 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDT-FKRILPENGEIHFKTD------NRGLFEYSLVSFSQY 172 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHSCTTCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EEECCCCccccchhhhccCCHHHHHH-HHHHcCCCcEEEEEeC------CHHHHHHHHHHHHHC
Confidence 999887652110 012445789999 8999999999998753 223445555666554
No 37
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.48 E-value=8.8e-13 Score=109.51 Aligned_cols=124 Identities=23% Similarity=0.194 Sum_probs=94.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++...+ ...++ ++.+|+.+.+....++||+|
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~-~~~~d~~~~~~~~~~~~D~i 98 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG---VSDRI-AVQQGAPRAFDDVPDNPDVI 98 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT---CTTSE-EEECCTTGGGGGCCSCCSEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC---CCCCE-EEecchHhhhhccCCCCCEE
Confidence 356679999999999999999987677899999999999999999876442 12478 88899877766544789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCc
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKY 244 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~ 244 (297)
+++...+. ..+++. +.+.|+|||.+++... ..+....+...+++....
T Consensus 99 ~~~~~~~~----------~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 99 FIGGGLTA----------PGVFAA-AWKRLPVGGRLVANAV------TVESEQMLWALRKQFGGT 146 (178)
T ss_dssp EECC-TTC----------TTHHHH-HHHTCCTTCEEEEEEC------SHHHHHHHHHHHHHHCCE
T ss_pred EECCcccH----------HHHHHH-HHHhcCCCCEEEEEee------ccccHHHHHHHHHHcCCe
Confidence 98754321 467888 7999999999998753 233445556666665443
No 38
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.48 E-value=1.2e-13 Score=125.64 Aligned_cols=150 Identities=11% Similarity=0.128 Sum_probs=98.5
Q ss_pred hcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 98 ~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
+...++.+||+||||+|.++..++...+..+|++||+||++++.||+++...+ + ++++++.+|+.++ . ++.||
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g--l--~~v~~v~gDa~~l-~--d~~FD 190 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG--V--DGVNVITGDETVI-D--GLEFD 190 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT--C--CSEEEEESCGGGG-G--GCCCS
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC--C--CCeEEEECchhhC-C--CCCcC
Confidence 34577899999999988765444333346899999999999999999987543 1 6899999999885 2 57899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCC
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFAD 257 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~ 257 (297)
+|+++...+ . ..++++. +.++|+|||++++...... . .-.+..+.....+.|.... ...|+-..
T Consensus 191 vV~~~a~~~---d------~~~~l~e-l~r~LkPGG~Lvv~~~~~~--r-~~l~~~v~~~~~~gf~~~~---~~~p~~~v 254 (298)
T 3fpf_A 191 VLMVAALAE---P------KRRVFRN-IHRYVDTETRIIYRTYTGM--R-AILYAPVSDDDITGFRRAG---VVLPSGKV 254 (298)
T ss_dssp EEEECTTCS---C------HHHHHHH-HHHHCCTTCEEEEEECCGG--G-GGSSCCCCTGGGTTEEEEE---EECCCTTC
T ss_pred EEEECCCcc---C------HHHHHHH-HHHHcCCCcEEEEEcCcch--h-hhccccCChhhhhhhhhee---EECCCCCc
Confidence 999875421 1 2478898 8999999999998853210 0 0000000011223344322 23354333
Q ss_pred ceeEEEEecCCCC
Q 022451 258 TWGWIMVSIYNPH 270 (297)
Q Consensus 258 ~~~~~~as~~~~~ 270 (297)
.+..+++.|..++
T Consensus 255 ~N~vv~a~k~~~~ 267 (298)
T 3fpf_A 255 NNTSVLVFKCPDK 267 (298)
T ss_dssp CCEEEEEEECC--
T ss_pred CcEEEEEEccCCc
Confidence 4668888877655
No 39
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.48 E-value=5.7e-13 Score=115.64 Aligned_cols=105 Identities=20% Similarity=0.318 Sum_probs=85.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc---C--C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--E 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~---~--~ 174 (297)
..+++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... . +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE---AEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 4678999999999999999998644 6799999999999999999986543 1368999999998876532 1 6
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+||+|++|+... ....+++. +.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADKE---------NCSAYYER-CLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCST---------THHHHHHH-HHHHEEEEEEEEEE
T ss_pred CccEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 899999986421 12478888 79999999999885
No 40
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.46 E-value=8.9e-13 Score=114.14 Aligned_cols=130 Identities=10% Similarity=0.114 Sum_probs=98.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-ccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~-~~~~~yD~I 179 (297)
.+..+|||||||+|.++..+++..+..++++||+++.+++.|+++....+ -++++++.+|+.++.. -.+..||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 45678999999999999999987777899999999999999999876442 2579999999987432 235679999
Q ss_pred EEcCCCCCCCCC--ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
++..++|+.... ...+....+++. +.+.|+|||.+++.+. .......+...+.+.
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~-~~~~LkpgG~l~~~td------~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKK-YEEVMGKGGSIHFKTD------NRGLFEYSLKSFSEY 169 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHHTTSCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EEECCCCCcCccccccccCcHHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 998777752111 123446789999 8999999999998753 233445555556554
No 41
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.46 E-value=1.6e-12 Score=111.08 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=96.6
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
...++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+ -++++++.+|+.+.+.. .++||+
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~ 111 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEGLDD-LPDPDR 111 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTTCTT-SCCCSE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhhhhc-CCCCCE
Confidence 3456789999999999999999988777899999999999999999876542 26899999998776543 267999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
|+++...+ ...++++. +.+.|+|||.+++... .......+.+.+++.
T Consensus 112 i~~~~~~~---------~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 112 VFIGGSGG---------MLEEIIDA-VDRRLKSEGVIVLNAV------TLDTLTKAVEFLEDH 158 (204)
T ss_dssp EEESCCTT---------CHHHHHHH-HHHHCCTTCEEEEEEC------BHHHHHHHHHHHHHT
T ss_pred EEECCCCc---------CHHHHHHH-HHHhcCCCeEEEEEec------ccccHHHHHHHHHHC
Confidence 99986532 13478888 7999999999998742 234556666777665
No 42
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=7.1e-13 Score=116.35 Aligned_cols=106 Identities=20% Similarity=0.326 Sum_probs=85.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-------
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------- 172 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~------- 172 (297)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG---LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 4678999999999999999998654 6799999999999999999986442 1357999999998876532
Q ss_pred --------C-CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 --------K-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 --------~-~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
. ++||+|+++...+ . ..++++. +.+.|+|||++++..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~-------~--~~~~l~~-~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKE-------N--YPNYYPL-ILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGG-------G--HHHHHHH-HHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCHH-------H--HHHHHHH-HHHHcCCCeEEEEEc
Confidence 2 6899999985311 1 2378888 799999999999864
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=1.1e-12 Score=113.90 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=96.6
Q ss_pred CCCCCeEEEEccc-hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGG-EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+++.+|||+||| +|.++..+++.. ..+|+++|+|+.+++.|++++...+ .+++++.+|+..+....+++||+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-----SNVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-----CCCEEEECSSCSSTTTCCSCEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-----CCcEEEeCCchhhhhcccCceeE
Confidence 3567899999999 999999998864 5799999999999999999887552 27999999975433223478999
Q ss_pred EEEcCCCCCCCC-----C--------ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCce
Q 022451 179 IIGDLADPIEGG-----P--------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYV 245 (297)
Q Consensus 179 Ii~D~~~~~~~~-----p--------~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (297)
|+++++-..... + ...-...++++. +.+.|+|||.+++... ........+.+.+++..-.+
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE-AFDHLNPGGKVALYLP-----DKEKLLNVIKERGIKLGYSV 200 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHH-HGGGEEEEEEEEEEEE-----SCHHHHHHHHHHHHHTTCEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHH-HHHHhCCCeEEEEEec-----ccHhHHHHHHHHHHHcCCce
Confidence 999976211000 0 000112678998 7999999999988642 12345567777777764344
Q ss_pred e
Q 022451 246 V 246 (297)
Q Consensus 246 ~ 246 (297)
.
T Consensus 201 ~ 201 (230)
T 3evz_A 201 K 201 (230)
T ss_dssp E
T ss_pred E
Confidence 3
No 44
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.46 E-value=3.9e-12 Score=114.16 Aligned_cols=175 Identities=15% Similarity=0.167 Sum_probs=113.6
Q ss_pred eeEEEEcCccccccCChhhHHHHHHHHHHhc-CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh
Q 022451 69 GKALVIDGKLQSAEVDEFIYHESLVHPALLH-HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV 147 (297)
Q Consensus 69 g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~-~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~ 147 (297)
|+.+.++....+..+. .+.++...+.. ..++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++.
T Consensus 79 ~~~~~~~~~~~ipr~~----te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 79 SLPLFVSPATLIPRPD----TECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp TEEEECCTTSCCCCTT----HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH
T ss_pred CceEEeCCCCcccCch----HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4556655544444333 23333222211 145679999999999999999976677899999999999999999876
Q ss_pred hccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCC-----------CCCccCc--------ccHHHHHHHHccc
Q 022451 148 VNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIE-----------GGPCYKL--------YTKSFYEFVVKPR 208 (297)
Q Consensus 148 ~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~-----------~~p~~~L--------~t~ef~~~~~~~~ 208 (297)
..+ -++++++.+|+.+.+. .++||+|+++++-... ..|...+ ....+++. +.+.
T Consensus 155 ~~~----~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~-~~~~ 227 (276)
T 2b3t_A 155 HLA----IKNIHILQSDWFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQ-SRNA 227 (276)
T ss_dssp HHT----CCSEEEECCSTTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHH-HGGG
T ss_pred HcC----CCceEEEEcchhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHH-HHHh
Confidence 542 2479999999987653 4689999999763111 0111111 12567888 7999
Q ss_pred CCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCCceeEEEEe
Q 022451 209 LNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFADTWGWIMVS 265 (297)
Q Consensus 209 L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~~~~~~~as 265 (297)
|+|||++++..+. ... ..+.+.+++. |..+..+ +.+.+...++++.
T Consensus 228 LkpgG~l~~~~~~----~~~---~~~~~~l~~~Gf~~v~~~----~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 228 LVSGGFLLLEHGW----QQG---EAVRQAFILAGYHDVETC----RDYGDNERVTLGR 274 (276)
T ss_dssp EEEEEEEEEECCS----SCH---HHHHHHHHHTTCTTCCEE----ECTTSSEEEEEEE
T ss_pred cCCCCEEEEEECc----hHH---HHHHHHHHHCCCcEEEEE----ecCCCCCcEEEEE
Confidence 9999999987532 233 3344445544 6655433 2344445666654
No 45
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.45 E-value=4.3e-13 Score=120.12 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=83.9
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
.+++.+|||||||+|..+..+++.. +..+|++||+++.|++.||+++.... ...+++++.+|+.++ ..+.||
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~~~~---~~~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDIRDI---AIENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCTTTC---CCCSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeecccccc---cccccc
Confidence 4678899999999999999998753 45699999999999999999876432 246899999998663 346799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++...-++ .+. --...+++. +++.|+|||+|++..
T Consensus 142 ~v~~~~~l~~--~~~--~~~~~~l~~-i~~~LkpGG~lii~e 178 (261)
T 4gek_A 142 MVVLNFTLQF--LEP--SERQALLDK-IYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cceeeeeeee--cCc--hhHhHHHHH-HHHHcCCCcEEEEEe
Confidence 9998764322 110 112357898 799999999998753
No 46
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.45 E-value=2.6e-13 Score=113.16 Aligned_cols=108 Identities=15% Similarity=0.218 Sum_probs=86.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+++....++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK---AENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT---CGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 46789999999999999999986 56799999999999999999876442 125799999999998765567799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHc--ccCCCCcEEEEecC
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAG 220 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGvl~~~~~ 220 (297)
++++-. .....++++. +. +.|+|||++++...
T Consensus 106 ~~~~~~-------~~~~~~~~~~-l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 106 LDPPYA-------KETIVATIEA-LAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp ECCSSH-------HHHHHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred ECCCCC-------cchHHHHHHH-HHhCCCcCCCcEEEEEEC
Confidence 986421 1123466777 66 89999999998864
No 47
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=5.4e-13 Score=117.81 Aligned_cols=127 Identities=20% Similarity=0.249 Sum_probs=98.8
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
...++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ -.++++++.+|+.+.+ ..++||
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D 164 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG---FDDRVTIKLKDIYEGI--EEENVD 164 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT---CTTTEEEECSCGGGCC--CCCSEE
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC---CCCceEEEECchhhcc--CCCCcC
Confidence 3456789999999999999999987 667899999999999999999986543 1356999999998664 346799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh---CCceeEE
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV---FKYVVPY 248 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~---F~~v~~~ 248 (297)
+|++|+++++ ++++. +.+.|+|||.+++... .......+.+.+++. |..+..+
T Consensus 165 ~v~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 165 HVILDLPQPE-----------RVVEH-AAKALKPGGFFVAYTP------CSNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp EEEECSSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred EEEECCCCHH-----------HHHHH-HHHHcCCCCEEEEEEC------CHHHHHHHHHHHHHcCCCccccEEE
Confidence 9999876432 56777 7999999999998742 234556667777765 7766544
No 48
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.44 E-value=2e-12 Score=114.95 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=94.8
Q ss_pred cCC-CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCc
Q 022451 99 HHP-NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESY 176 (297)
Q Consensus 99 ~~~-~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~y 176 (297)
... ++.+|||+|||+|.++..+++..+ .+|++||+++.+++.|++++..++ -.++++++.+|+.++... ..++|
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~---~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ---LEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT---CTTTEEEECSCGGGGGGTSCTTCE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC---CcccEEEEECcHHHhhhhhccCCc
Confidence 334 678999999999999999998754 499999999999999999987553 135899999999887643 25789
Q ss_pred eEEEEcCCCCCC---C--CCc--c-------CcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 177 DVIIGDLADPIE---G--GPC--Y-------KLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 177 D~Ii~D~~~~~~---~--~p~--~-------~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
|+|++|++-... . .+. . ...-.++++. +.+.|+|||.+++-.. + .....+...+++.
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-~------~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRV-AASLLKQGGKANFVHR-P------ERLLDIIDIMRKY 191 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHH-HHHHEEEEEEEEEEEC-T------TTHHHHHHHHHHT
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHH-HHHHccCCcEEEEEEc-H------HHHHHHHHHHHHC
Confidence 999999762110 0 000 0 0112468888 7999999999988532 1 2345566667654
No 49
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=4.1e-13 Score=112.42 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=84.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+++.. ..++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITK---EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhC---CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 46789999999999999988875 45799999999999999999886542 125899999999887643 257899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHH--cccCCCCcEEEEecC
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAG 220 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~--~~~L~pgGvl~~~~~ 220 (297)
+|+++++-.. ....+.++. + .+.|+|||++++...
T Consensus 119 ~i~~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 119 LVLLDPPYAK-------QEIVSQLEK-MLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEECCCGGG-------CCHHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred EEEECCCCCc-------hhHHHHHHH-HHHhcccCCCCEEEEEeC
Confidence 9999975111 112355666 6 789999999998764
No 50
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.43 E-value=1.2e-12 Score=111.71 Aligned_cols=141 Identities=11% Similarity=0.130 Sum_probs=97.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
++.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++...+ -++++++.+|+.++. ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~--~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP--SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC--CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC--ccCCcCEEEE
Confidence 4679999999999999999987667899999999999999999876542 245999999987754 2468999998
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCCceeE
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWGW 261 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~~ 261 (297)
....+ -..+++. +.+.|+|||.+++..+. ...+.+..+ + +-|..+.......|...+...+
T Consensus 139 ~~~~~----------~~~~l~~-~~~~L~~gG~l~~~~~~----~~~~~~~~~---~-~g~~~~~~~~~~~~~~~~~~~~ 199 (207)
T 1jsx_A 139 RAFAS----------LNDMVSW-CHHLPGEQGRFYALKGQ----MPEDEIALL---P-EEYQVESVVKLQVPALDGERHL 199 (207)
T ss_dssp SCSSS----------HHHHHHH-HTTSEEEEEEEEEEESS----CCHHHHHTS---C-TTEEEEEEEEEECC--CCEEEE
T ss_pred eccCC----------HHHHHHH-HHHhcCCCcEEEEEeCC----CchHHHHHH---h-cCCceeeeeeeccCCCCCceEE
Confidence 64311 2378888 79999999999987642 122222221 1 2343333222245655554566
Q ss_pred EEEecC
Q 022451 262 IMVSIY 267 (297)
Q Consensus 262 ~~as~~ 267 (297)
+++.+.
T Consensus 200 ~~~~k~ 205 (207)
T 1jsx_A 200 VVIKAN 205 (207)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 666554
No 51
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.43 E-value=6.4e-13 Score=114.05 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=83.8
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
++.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++...+ -++++++.+|+.+++....++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 56899999999999999877753 4699999999999999999887543 268999999999988655678999999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHc--ccCCCCcEEEEecC
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAG 220 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGvl~~~~~ 220 (297)
|++-.. . ...++++. +. +.|+|||++++.+.
T Consensus 129 ~~p~~~------~-~~~~~l~~-l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFRR------G-LLEETINL-LEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSST------T-THHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred CCCCCC------C-cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 976211 1 12356666 54 45999999988753
No 52
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.43 E-value=2.4e-12 Score=119.26 Aligned_cols=113 Identities=15% Similarity=0.251 Sum_probs=85.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
.++.+|||+|||+|.++..+++.. .+|++||+|+.+++.|++++..++ +.+.+++++.+|+.+++.. ..++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCce
Confidence 456799999999999999999853 399999999999999999987653 2233699999999998754 256899
Q ss_pred EEEEcCCCCCCCCCccCcc-----cHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++|++.-.. .+...++ -.++++. +.+.|+|||++++..
T Consensus 228 ~Ii~dPP~~~~-~~~~~~~~~~~~~~~ll~~-~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 228 IILTDPPKFGR-GTHGEVWQLFDHLPLMLDI-CREILSPKALGLVLT 272 (332)
T ss_dssp EEEECCCSEEE-CTTCCEEEHHHHHHHHHHH-HHHTBCTTCCEEEEE
T ss_pred EEEECCccccC-CchHHHHHHHHHHHHHHHH-HHHhcCcCcEEEEEE
Confidence 99999862110 1101111 2467887 689999999966654
No 53
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.42 E-value=6e-13 Score=114.14 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=84.1
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCC-ceEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKES-YDVI 179 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~-yD~I 179 (297)
++.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++...+ +..++++++.+|+.+++.. ..++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 56799999999999999877753 4699999999999999999986542 1125899999999988654 2467 9999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHH--cccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~--~~~L~pgGvl~~~~~ 220 (297)
++|++-.. . ...++++. + .+.|+|||++++.+.
T Consensus 130 ~~~~~~~~------~-~~~~~l~~-~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 130 FLDPPFHF------N-LAEQAISL-LCENNWLKPNALIYVETE 164 (201)
T ss_dssp EECCCSSS------C-HHHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred EECCCCCC------c-cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 99976211 1 12366777 6 578999999998764
No 54
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=9.9e-13 Score=115.92 Aligned_cols=133 Identities=12% Similarity=0.073 Sum_probs=94.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc--cCCCCCCCeEEEEcchHHHHh--ccCCCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN--KEAFSDPRLELVINDARAELE--SRKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~--~~~~~~~rv~~~~~Da~~~l~--~~~~~y 176 (297)
....+|||||||+|.++..+++..+..+|++||+++.+++.|++.+... ......++++++.+|+..++. -.++.|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567899999999999999998777789999999999999999875421 000123689999999987554 235789
Q ss_pred eEEEEcCCCCCCCC--CccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 177 DVIIGDLADPIEGG--PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 177 D~Ii~D~~~~~~~~--p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
|.|++..++|+... ....+....+++. +.++|+|||.|++.+. .......+...+.+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~-~~~~LkpGG~l~~~td------~~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAE-YAYVLRVGGLVYTITD------VLELHDWMCTHFEE 183 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHT
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHH-HHHHCCCCCEEEEEeC------CHHHHHHHHHHHHH
Confidence 99999877765211 0123445689999 8999999999998753 23344455555554
No 55
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.42 E-value=2.3e-12 Score=108.11 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=82.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++...+ -++++++.+|........+++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG----IENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 56789999999999999999986 5799999999999999999886542 26899999887664323457899999
Q ss_pred EcCC-CCCCCCCc--cCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLA-DPIEGGPC--YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~-~~~~~~p~--~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+++. -+...... ..-....+++. +.+.|+|||.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEK-ILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEC-----------CHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCCCCCcchhcccChhhHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9842 22100000 00112357788 789999999998765
No 56
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=4e-12 Score=107.75 Aligned_cols=115 Identities=13% Similarity=0.041 Sum_probs=87.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...+ -.++++++.+|+.++....+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN---LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT---CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHhhhccCCceEE
Confidence 567899999999999999999863 45699999999999999999876542 13689999999987754455789999
Q ss_pred EEcCCC-CCCCCC--ccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLAD-PIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~-~~~~~p--~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+++++- |..... ...-...++++. +.+.|+|||.+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSK-AMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHH-HHHhCcCCCEEEEEE
Confidence 999742 211000 000112468888 799999999998775
No 57
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.41 E-value=8.5e-13 Score=108.74 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=82.8
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc---CCCceE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~---~~~yD~ 178 (297)
++++|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++.... -+++++.+|+.+++... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTG-----LGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHT-----CCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcC-----CceEEEeccHHHHHHhhhccCCceEE
Confidence 67899999999999999999864 349999999999999999887542 17999999998876432 347999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHc--ccCCCCcEEEEecCC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAGP 221 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGvl~~~~~~ 221 (297)
|+++++-. . . ..++++. +. +.|+|||++++.+..
T Consensus 114 i~~~~~~~-~-~------~~~~~~~-~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 114 AFMAPPYA-M-D------LAALFGE-LLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEECCCTT-S-C------TTHHHHH-HHHHTCEEEEEEEEEEEET
T ss_pred EEECCCCc-h-h------HHHHHHH-HHhhcccCCCcEEEEEeCC
Confidence 99997532 1 1 2267777 67 999999999988643
No 58
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.41 E-value=3e-13 Score=122.02 Aligned_cols=130 Identities=16% Similarity=0.064 Sum_probs=98.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||+|||+|.++..+++... .+|+++|+|+.+++.|++++..++. .++++++.+|+.+++. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~---~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECCHHHhcc--cCCccEEE
Confidence 4578999999999999999998743 3899999999999999999876541 3579999999988765 57899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP 247 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (297)
+|++.. ..++++. +.+.|+|||++++....+...........+.+.+++..-.+..
T Consensus 198 ~~~p~~----------~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCchh----------HHHHHHH-HHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 987521 1367777 7899999999998764431122234556677777766544443
No 59
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=2.8e-12 Score=109.54 Aligned_cols=140 Identities=17% Similarity=0.210 Sum_probs=99.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++.... -++++++.+|+..+. .++||+|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~fD~i 129 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNG----IYDIALQKTSLLADV---DGKFDLI 129 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT----CCCCEEEESSTTTTC---CSCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEeccccccC---CCCceEE
Confidence 356789999999999999998875 46799999999999999999887542 234999999987653 4789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCCc
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFADT 258 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~~ 258 (297)
+++.+.+ . ...+++. +.+.|+|||.+++... .......+.+.+++. |..+.... .+.
T Consensus 130 ~~~~~~~-------~--~~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~~~~~Gf~~~~~~~------~~~ 187 (205)
T 3grz_A 130 VANILAE-------I--LLDLIPQ-LDSHLNEDGQVIFSGI------DYLQLPKIEQALAENSFQIDLKMR------AGR 187 (205)
T ss_dssp EEESCHH-------H--HHHHGGG-SGGGEEEEEEEEEEEE------EGGGHHHHHHHHHHTTEEEEEEEE------ETT
T ss_pred EECCcHH-------H--HHHHHHH-HHHhcCCCCEEEEEec------CcccHHHHHHHHHHcCCceEEeec------cCC
Confidence 9985421 1 2467788 7999999999988632 122345566666654 44332221 234
Q ss_pred eeEEEEecCCC
Q 022451 259 WGWIMVSIYNP 269 (297)
Q Consensus 259 ~~~~~as~~~~ 269 (297)
|..++..+.+.
T Consensus 188 w~~~~~~~~~~ 198 (205)
T 3grz_A 188 WIGLAISRKHE 198 (205)
T ss_dssp EEEEEEEECC-
T ss_pred EEEEEEecccc
Confidence 66555555543
No 60
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.41 E-value=7e-12 Score=107.81 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=93.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++.++++. ..+|++||+++.+++.|++++...+ -..+++++.+|+.+.+.. ..+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~-~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG---LSPRMRAVQGTAPAALAD-LPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCTTGGGTT-SCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCEEEEeCchhhhccc-CCCCCEE
Confidence 456789999999999999999987 5799999999999999999876442 123899999999886644 3579999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (297)
+++... ..++++. +.+.|+|||.+++... ..+....+.+.+++..
T Consensus 127 ~~~~~~-----------~~~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 127 FIGGGG-----------SQALYDR-LWEWLAPGTRIVANAV------TLESETLLTQLHARHG 171 (204)
T ss_dssp EECSCC-----------CHHHHHH-HHHHSCTTCEEEEEEC------SHHHHHHHHHHHHHHC
T ss_pred EECCcc-----------cHHHHHH-HHHhcCCCcEEEEEec------CcccHHHHHHHHHhCC
Confidence 987521 1238888 7999999999998753 3455667777777664
No 61
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.41 E-value=3.3e-13 Score=120.67 Aligned_cols=100 Identities=19% Similarity=0.210 Sum_probs=80.7
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+...+|||||||+|..+..++++. .+|++||+++.|++.|++ .++++++.+|+.+. .-.+++||+|
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~-~~~~~sfD~v 103 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT-GLPPASVDVA 103 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC-CCCSSCEEEE
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh-cccCCcccEE
Confidence 4567899999999999999999864 689999999999987764 37899999998653 3346789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
++...-++. -...++++ ++++|+|||+|++...
T Consensus 104 ~~~~~~h~~-------~~~~~~~e-~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 104 IAAQAMHWF-------DLDRFWAE-LRRVARPGAVFAAVTY 136 (257)
T ss_dssp EECSCCTTC-------CHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred EEeeehhHh-------hHHHHHHH-HHHHcCCCCEEEEEEC
Confidence 997654441 13478999 8999999999988753
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=9.7e-13 Score=115.16 Aligned_cols=109 Identities=9% Similarity=0.080 Sum_probs=82.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~I 179 (297)
.++.+|||||||+|.++..+++.. ..+|++||+++.+++.|+++.... .++++++.+|+.+.+.. .+++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 467899999999999999998753 458999999999999999976543 26799999999887533 35789999
Q ss_pred EEcCCCCCCCCCccCcc-cHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLY-TKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~-t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++|.+... .+..... ...+++. ++++|+|||+|++.
T Consensus 133 ~~d~~~~~--~~~~~~~~~~~~l~~-~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred EECCcccc--hhhhhhhhHHHHHHH-HHHhcCCCeEEEEE
Confidence 99754321 1111111 1256888 79999999999864
No 63
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.38 E-value=1.3e-11 Score=106.31 Aligned_cols=109 Identities=21% Similarity=0.289 Sum_probs=82.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-CCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~-~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.|++.+...... ...++++++.+|+.. +....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY-RDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS-CCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc-cccccCCCCEE
Confidence 4678999999999999999998766689999999999999999987543210 001389999999732 33334789999
Q ss_pred EEcCCCCCCCCCccCccc---HHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t---~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++...-. .+.. ..+++. +++.|+|||+++..
T Consensus 107 ~~~~~l~-------~~~~~~~~~~l~~-~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIE-------HLDENRLQAFEKV-LFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGG-------GCCHHHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred EEHHHHH-------hCCHHHHHHHHHH-HHHhhCCCEEEEEc
Confidence 9865421 2221 378898 79999999987765
No 64
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.38 E-value=1.2e-12 Score=114.31 Aligned_cols=106 Identities=22% Similarity=0.316 Sum_probs=87.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc--CCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~--~~~yD~ 178 (297)
.++++||+||||+|..+..+++..+..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++... .++||+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG---LESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhcccCCCccE
Confidence 46789999999999999999987667899999999999999999986542 1357999999998876543 578999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+++...+ ...++++. +.+.|+|||++++..
T Consensus 130 I~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAKG---------QYRRFFDM-YSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGGS---------CHHHHHHH-HGGGEEEEEEEEEET
T ss_pred EEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEEc
Confidence 99986421 12478888 799999999999873
No 65
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.37 E-value=8.7e-12 Score=112.91 Aligned_cols=142 Identities=15% Similarity=0.194 Sum_probs=96.6
Q ss_pred eeEEEEcCccccccCChhhHHHHHHHHHHhcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh
Q 022451 69 GKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (297)
Q Consensus 69 g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~ 148 (297)
|..+.++....+..+......+.+.. .+....+.+|||||||+|.++..+++. +..+|++||+|+.+++.|+++...
T Consensus 92 ~~~~~v~~~~lipr~~te~lv~~~l~--~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 92 GLSFLVEEGVFVPRPETEELVELALE--LIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp TEEEECCTTSCCCCTTHHHHHHHHHH--HHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred CeEEEeCCCceecChhHHHHHHHHHH--HhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 55666665444443332222222221 111125579999999999999999988 778999999999999999999765
Q ss_pred ccCCCCCCCeEEEEcchHHHHhccCCCc---eEEEEcCCC-CCC--------CCCccCcc----cHHHHHHHHc-ccCCC
Q 022451 149 NKEAFSDPRLELVINDARAELESRKESY---DVIIGDLAD-PIE--------GGPCYKLY----TKSFYEFVVK-PRLNP 211 (297)
Q Consensus 149 ~~~~~~~~rv~~~~~Da~~~l~~~~~~y---D~Ii~D~~~-~~~--------~~p~~~L~----t~ef~~~~~~-~~L~p 211 (297)
.+ -..+++++.+|+.+.+. ++| |+|+++++- +.. ..|...|+ ..++++. +. +.|+|
T Consensus 169 ~~---l~~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~-i~~~~l~p 241 (284)
T 1nv8_A 169 HG---VSDRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYRE-FFGRYDTS 241 (284)
T ss_dssp TT---CTTSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHH-HHHHCCCT
T ss_pred cC---CCCceEEEECcchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHH-HHHhcCCC
Confidence 43 13479999999988664 468 999999752 110 01100000 1278999 78 99999
Q ss_pred CcEEEEecC
Q 022451 212 EGIFVTQAG 220 (297)
Q Consensus 212 gGvl~~~~~ 220 (297)
||.+++..+
T Consensus 242 gG~l~~e~~ 250 (284)
T 1nv8_A 242 GKIVLMEIG 250 (284)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEEC
Confidence 999998753
No 66
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.37 E-value=3.1e-12 Score=109.25 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=83.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++.+.... ..++++++.+|+.+. ....++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~~D~v~ 116 (219)
T 3dlc_A 42 ITAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN---LNDRIQIVQGDVHNI-PIEDNYADLIV 116 (219)
T ss_dssp CCEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc---ccCceEEEEcCHHHC-CCCcccccEEE
Confidence 34459999999999999999987 56799999999999999999876542 246899999998663 23457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+.. + ....+++. +.+.|+|||.+++..
T Consensus 117 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 117 SRGSVFFW--E----DVATAFRE-IYRILKSGGKTYIGG 148 (219)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECchHhhc--c----CHHHHHHH-HHHhCCCCCEEEEEe
Confidence 98653221 1 12478888 799999999998863
No 67
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.37 E-value=1.2e-11 Score=116.78 Aligned_cols=118 Identities=13% Similarity=0.116 Sum_probs=88.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
..+++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ +.+.+++++.+|+.+++.. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 46789999999999999999985 35699999999999999999987653 1222899999999998754 246899
Q ss_pred EEEEcCCCCCCC-CCccCc--ccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 178 VIIGDLADPIEG-GPCYKL--YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 178 ~Ii~D~~~~~~~-~p~~~L--~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
+|++|++..... ...... .-.++++. +.+.|+|||++++.++++
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~-~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQ-GLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCC
Confidence 999998742100 000111 11245666 689999999999887654
No 68
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.37 E-value=2.4e-11 Score=101.42 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=96.5
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
...++.+||++|||+|.++..+++.. .+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... ++||+
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~-~~~D~ 103 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG---LGDNVTLMEGDAPEALCKI-PDIDI 103 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT---CCTTEEEEESCHHHHHTTS-CCEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC---CCcceEEEecCHHHhcccC-CCCCE
Confidence 34567899999999999999999865 799999999999999999876442 1268999999998866432 47999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCcee
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVV 246 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~ 246 (297)
|+++...+ . -.++++. +.+.|+|||.+++... .......+.+.+++. | .+.
T Consensus 104 v~~~~~~~-------~--~~~~l~~-~~~~l~~gG~l~~~~~------~~~~~~~~~~~l~~~g~-~~~ 155 (192)
T 1l3i_A 104 AVVGGSGG-------E--LQEILRI-IKDKLKPGGRIIVTAI------LLETKFEAMECLRDLGF-DVN 155 (192)
T ss_dssp EEESCCTT-------C--HHHHHHH-HHHTEEEEEEEEEEEC------BHHHHHHHHHHHHHTTC-CCE
T ss_pred EEECCchH-------H--HHHHHHH-HHHhcCCCcEEEEEec------CcchHHHHHHHHHHCCC-ceE
Confidence 99985421 1 2578898 7999999999988742 334556677777765 6 443
No 69
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=3.9e-12 Score=112.23 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=89.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC----CCCCCeEEEEcchHHHHhc--cCC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----FSDPRLELVINDARAELES--RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~----~~~~rv~~~~~Da~~~l~~--~~~ 174 (297)
+++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++...... ..-++++++.+|+.+++.. ...
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567899999999999999998766679999999999999999887543100 0125799999999887653 356
Q ss_pred CceEEEEcCCCCCCCCC--ccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|.|++..++|+.... ...+...++++. +.+.|+|||+|++.+
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~-~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSE-YAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHH-HHHHcCCCCEEEEEe
Confidence 89999988776652110 123445789999 899999999999864
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.36 E-value=1e-11 Score=106.62 Aligned_cols=135 Identities=11% Similarity=0.070 Sum_probs=95.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+.. .++++++.+|+.++. ..++||+|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~fD~v 118 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS--TAELFDLI 118 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC--CSCCEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC--CCCCccEE
Confidence 3456899999999999999999863 6899999999999999998653 258999999987764 45789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCC---CcCCchHHHHHHHHHHhhCCceeEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~---~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
++...-.....+ . .-..+++. +.+.|+|||++++.+..+. .|........+.+.+.+.+..+...
T Consensus 119 ~~~~~l~~~~~~--~-~~~~~l~~-~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 186 (216)
T 3ofk_A 119 VVAEVLYYLEDM--T-QMRTAIDN-MVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERV 186 (216)
T ss_dssp EEESCGGGSSSH--H-HHHHHHHH-HHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEE
T ss_pred EEccHHHhCCCH--H-HHHHHHHH-HHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEE
Confidence 997542220011 0 01367888 7999999999998541110 0122223345666666667665443
No 71
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.35 E-value=3.4e-12 Score=113.51 Aligned_cols=106 Identities=14% Similarity=0.095 Sum_probs=85.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++. +..+|++||+++.+++.|++.+...+ -.++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG---LQNRVTGIVGSMDDL-PFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC---CCcCcEEEEcChhhC-CCCCCCEEEEE
Confidence 56789999999999999999987 56799999999999999999876442 236899999998653 22357899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. +-...+++. +.+.|+|||++++..
T Consensus 120 ~~~~~~~-------~~~~~~l~~-~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 120 SEGAIYN-------IGFERGLNE-WRKYLKKGGYLAVSE 150 (267)
T ss_dssp ESSCGGG-------TCHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EcCCcee-------cCHHHHHHH-HHHHcCCCCEEEEEE
Confidence 8764322 123578998 899999999998874
No 72
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.35 E-value=4.9e-12 Score=118.99 Aligned_cols=134 Identities=16% Similarity=0.212 Sum_probs=96.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||+|||+|.++..+++..|..+|++||+|+.+++.|++++..++.. +..+++++.+|+.+.+ ..++||+|+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~~~--~~~~fD~Ii 297 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGV--EPFRFNAVL 297 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTTTC--CTTCEEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhccC--CCCCeeEEE
Confidence 3458999999999999999999877889999999999999999998754210 1236889999988754 346899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
++++-+..... ..-...++++. +.++|+|||++++-... ... ....+++.|..+...
T Consensus 298 ~nppfh~~~~~-~~~~~~~~l~~-~~~~LkpgG~l~iv~n~-----~~~----~~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 298 CNPPFHQQHAL-TDNVAWEMFHH-ARRCLKINGELYIVANR-----HLD----YFHKLKKIFGNCTTI 354 (375)
T ss_dssp ECCCC--------CCHHHHHHHH-HHHHEEEEEEEEEEEET-----TSC----HHHHHHHHHSCCEEE
T ss_pred ECCCcccCccc-CHHHHHHHHHH-HHHhCCCCcEEEEEEEC-----CcC----HHHHHHHhcCCEEEE
Confidence 99874321011 11223478999 79999999999885422 111 135567778876644
No 73
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.34 E-value=4.4e-12 Score=111.70 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=84.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|..+..+++..+ .+|++||+++.+++.|++++...+ -.++++++.+|+... ...+++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKAN---CADRVKGITGSMDNL-PFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECChhhC-CCCCCCEEEEE
Confidence 4567999999999999999998764 499999999999999999876543 235799999998543 23457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. +-..++++. +.+.|+|||++++..
T Consensus 120 ~~~~l~~-------~~~~~~l~~-~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYN-------IGFERGMNE-WSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCC-------CCHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred ecChHhh-------cCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9865322 123578898 899999999998874
No 74
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.34 E-value=2.2e-12 Score=112.12 Aligned_cols=106 Identities=19% Similarity=0.275 Sum_probs=83.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++.+... ++++++.+|+.+... .++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~--~~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF--EEKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC--CSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC--CCCceEEE
Confidence 4678999999999999999998777789999999999999999986532 489999999876532 27899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ .....++++. +++.|+|||.+++..
T Consensus 115 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHH--LE--DEDKKELYKR-SYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCcccc--CC--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9854221 11 1111258898 799999999998764
No 75
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=5.9e-12 Score=110.91 Aligned_cols=124 Identities=13% Similarity=0.131 Sum_probs=95.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
..++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+. .-..++||
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~-~~~~~~~D 168 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA-ELEEAAYD 168 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC-CCCTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc-CCCCCCcC
Confidence 356789999999999999999986 55689999999999999999987643 2 36899999998775 11236799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCcee
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVV 246 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~ 246 (297)
+|++|.++++ ++++. +.+.|+|||.+++... ..+....+.+.+++. |..+.
T Consensus 169 ~v~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 169 GVALDLMEPW-----------KVLEK-AALALKPDRFLVAYLP------NITQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHTTTTEEEEE
T ss_pred EEEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHHCCCceEE
Confidence 9999865321 56777 7899999999998752 234556777777654 54443
No 76
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.34 E-value=8.6e-12 Score=107.38 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=82.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-CCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~-~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.|++.+...... ...++++++.+|+. .+....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEE
Confidence 4678999999999999999998766679999999999999999987543210 00138999999974 233334689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++...-.. .+. -.-..+++. +++.|+|||++++.
T Consensus 107 ~~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 107 TVIEVIEH--LDL--SRLGAFERV-LFEFAQPKIVIVTT 140 (217)
T ss_dssp EEESCGGG--CCH--HHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred eeHHHHHc--CCH--HHHHHHHHH-HHHHcCCCEEEEEc
Confidence 98754221 110 011478888 79999999988765
No 77
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.34 E-value=5.7e-12 Score=114.25 Aligned_cols=111 Identities=18% Similarity=0.075 Sum_probs=85.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++..+ .+|++||+++.+++.|++.+...+ -.++++++.+|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD---SPRRKEVRIQGWEEF----DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC---CSSCEEEEECCGGGC----CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECCHHHc----CCCccEE
Confidence 35677999999999999999998754 789999999999999999876542 135899999999775 5789999
Q ss_pred EEcCCCCCCCCCc---cCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPC---YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.....|. ..-.-..+++. +.+.|+|||.+++..
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKK-FYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHH-HHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9875422111110 01122578999 799999999999875
No 78
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=2.4e-11 Score=106.03 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=80.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~~yD~ 178 (297)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.|+++... .++++++.+|+..... ....+||+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANIVEKVDV 146 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTTSCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccccccCccEEE
Confidence 456899999999999999999875567999999999999999987532 2689999999876211 11267999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+++..++. ....+++. +.+.|+|||.+++.
T Consensus 147 v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 147 IYEDVAQPN--------QAEILIKN-AKWFLKKGGYGMIA 177 (230)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEEecCChh--------HHHHHHHH-HHHhCCCCcEEEEE
Confidence 998764321 12467888 79999999999884
No 79
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.33 E-value=1.7e-11 Score=106.31 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=81.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH--hccCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--ESRKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l--~~~~~~yD 177 (297)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.+++..... ++++++.+|+.+.. ....++||
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchhhcccCCce
Confidence 45679999999999999999976 34579999999999999998875422 68999999987632 22245899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++|.+.+. ....+++. +.+.|+|||.+++..
T Consensus 146 ~v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 146 VIFEDVAQPT--------QAKILIDN-AEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEECCCCHh--------HHHHHHHH-HHHhcCCCCEEEEEE
Confidence 9999876321 12345888 799999999988763
No 80
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.33 E-value=6.2e-12 Score=112.87 Aligned_cols=107 Identities=18% Similarity=0.295 Sum_probs=85.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|.++..+++. ..+|++||+++.+++.|++.+...+ -.++++++.+|+.+.....+++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG---VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C---CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC---CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 45789999999999999999986 4689999999999999999876432 126899999999876544568899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ . ...+++. ++++|+|||++++..
T Consensus 142 ~~~~l~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEW--VA--D--PRSVLQT-LWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGG--CS--C--HHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhc--cc--C--HHHHHHH-HHHHcCCCeEEEEEE
Confidence 9755322 11 1 2478899 899999999998864
No 81
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=5e-12 Score=113.43 Aligned_cols=124 Identities=19% Similarity=0.249 Sum_probs=94.3
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.... -.++++++.+|+.+.+ ..++||+
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~ 184 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG---LIERVTIKVRDISEGF--DEKDVDA 184 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT---CGGGEEEECCCGGGCC--SCCSEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHcc--cCCccCE
Confidence 355789999999999999999986 556899999999999999999876432 1257999999988764 2357999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCcee
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVV 246 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~ 246 (297)
|++|+++++ ++++. +.+.|+|||.+++... .......+.+.+++. |..+.
T Consensus 185 V~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 185 LFLDVPDPW-----------NYIDK-CWEALKGGGRFATVCP------TTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp EEECCSCGG-----------GTHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHSSEEEEE
T ss_pred EEECCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHCCCceeE
Confidence 999875432 56677 7899999999998752 223456666667653 44333
No 82
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.33 E-value=5.6e-12 Score=113.14 Aligned_cols=125 Identities=14% Similarity=0.153 Sum_probs=94.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
..++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+ .+++||
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~--~~~~fD 181 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI--SDQMYD 181 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC--CSCCEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccC--cCCCcc
Confidence 356689999999999999999986 56689999999999999999987643 2 268999999987743 246799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEE
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPY 248 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~ 248 (297)
+|++|.+++. ++++. +.+.|+|||++++.+. .......+.+.+++. |..+..+
T Consensus 182 ~Vi~~~~~~~-----------~~l~~-~~~~LkpgG~l~i~~~------~~~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 182 AVIADIPDPW-----------NHVQK-IASMMKPGSVATFYLP------NFDQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp EEEECCSCGG-----------GSHHH-HHHTEEEEEEEEEEES------SHHHHHHHHHHSGGGTEEEEEEE
T ss_pred EEEEcCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHCCCeEEEEE
Confidence 9999765321 56777 7899999999998752 223445666666654 5544433
No 83
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.33 E-value=1.8e-11 Score=105.09 Aligned_cols=100 Identities=21% Similarity=0.240 Sum_probs=79.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
..+.+|||||||+|.++..+++. ..+|+++|+++.+++.|++. ++++++..|+...... ...+||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 45689999999999999999986 45899999999999999985 4567889998876322 235699
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+|++...-.. .. -..+++. +++.|+|||.+++...
T Consensus 119 ~v~~~~~l~~-~~------~~~~l~~-~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALLH-QD------IIELLSA-MRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCCS-SC------CHHHHHH-HHHTEEEEEEEEEEEC
T ss_pred EEEECchhhh-hh------HHHHHHH-HHHHhCCCeEEEEEec
Confidence 9999765331 11 2378888 8999999999998763
No 84
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.32 E-value=5.8e-12 Score=118.72 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=101.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++. ..+|++||+|+.+++.|++++..+. .+++++.+|+.+.... .++||+|+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~-----~~v~~~~~D~~~~~~~-~~~fD~Ii 303 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANA-----LKAQALHSDVDEALTE-EARFDIIV 303 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTSCT-TCCEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-----CCeEEEEcchhhcccc-CCCeEEEE
Confidence 35679999999999999999986 3599999999999999999987542 3489999999876542 47899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCccCCcee
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSFADTWG 260 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~ 260 (297)
++++-+..... ..-...++++. ++++|+|||.+++..... . .....+.+.|..+.... ..++.
T Consensus 304 ~npp~~~~~~~-~~~~~~~~l~~-~~~~LkpGG~l~iv~n~~---l------~~~~~l~~~f~~v~~l~------~~gF~ 366 (381)
T 3dmg_A 304 TNPPFHVGGAV-ILDVAQAFVNV-AAARLRPGGVFFLVSNPF---L------KYEPLLEEKFGAFQTLK------VAEYK 366 (381)
T ss_dssp ECCCCCTTCSS-CCHHHHHHHHH-HHHHEEEEEEEEEEECTT---S------CHHHHHHHHHSCCEEEE------ESSSE
T ss_pred ECCchhhcccc-cHHHHHHHHHH-HHHhcCcCcEEEEEEcCC---C------ChHHHHHHhhccEEEEe------CCCEE
Confidence 99774431110 11123478888 799999999999876432 1 22355666777765431 12345
Q ss_pred EEEEecCCCC
Q 022451 261 WIMVSIYNPH 270 (297)
Q Consensus 261 ~~~as~~~~~ 270 (297)
++-+.+....
T Consensus 367 Vl~a~~~~~~ 376 (381)
T 3dmg_A 367 VLFAEKRGRH 376 (381)
T ss_dssp EEEEECC---
T ss_pred EEEEEEeccc
Confidence 5555555543
No 85
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=1.9e-11 Score=105.76 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=76.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~~yD~ 178 (297)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+..... ...++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhcccccceeE
Confidence 456799999999999999988865557999999999987655443221 1468889999876411 12368999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+++...+. ....+++. +++.|+|||.+++..
T Consensus 130 V~~~~~~~~--------~~~~~l~~-~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDIAQKN--------QIEILKAN-AEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEeccChh--------HHHHHHHH-HHHHhCCCCEEEEEE
Confidence 999954321 12245788 799999999998874
No 86
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.32 E-value=5.2e-12 Score=111.14 Aligned_cols=107 Identities=20% Similarity=0.129 Sum_probs=83.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+...+ -.++++++.+|+.+... +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~---~~~~v~~~~~d~~~~~~--~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG---VSERVHFIHNDAAGYVA--NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCCTTCCC--SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECChHhCCc--CCCCCEE
Confidence 4567899999999999999999865 4689999999999999999876432 13589999999876532 5789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ --..+++. +++.|+|||.+++..
T Consensus 108 ~~~~~~~~--~~----~~~~~l~~-~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWI--AG----GFAGAEEL-LAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGG--TS----SSHHHHHH-HTTSEEEEEEEEEEE
T ss_pred EECCChHh--cC----CHHHHHHH-HHHHcCCCeEEEEec
Confidence 98543211 11 12578898 899999999998753
No 87
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.1e-10 Score=96.70 Aligned_cols=120 Identities=15% Similarity=0.100 Sum_probs=93.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++..+++ +..+++++|+++.+++.|++++...+ -++++++.+|+.+.+.. ++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~~--~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDVLDK--LEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHHGGG--CCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCccccccC--CCCcEE
Confidence 35678999999999999999998 46899999999999999999886542 25799999999885543 689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCcee
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVV 246 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (297)
+++.. . . ..++++. +++. |||.+++... .......+.+.+++..-.+.
T Consensus 105 ~~~~~-~---~------~~~~l~~-~~~~--~gG~l~~~~~------~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 105 FIGGT-K---N------IEKIIEI-LDKK--KINHIVANTI------VLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp EECSC-S---C------HHHHHHH-HHHT--TCCEEEEEES------CHHHHHHHHHHHHHTTCEEE
T ss_pred EECCc-c---c------HHHHHHH-HhhC--CCCEEEEEec------ccccHHHHHHHHHHcCCeEE
Confidence 99865 1 1 2477887 6666 9999998752 33456677777877654443
No 88
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.32 E-value=1.5e-11 Score=110.49 Aligned_cols=139 Identities=14% Similarity=0.040 Sum_probs=96.2
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCC
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKE 174 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~ 174 (297)
...++.+|||+|||+|+.+..+++..+. .+|+++|+++.+++.+++++...+ -++++++.+|+..+... ..+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTC
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccc
Confidence 3456789999999999999999875433 799999999999999999876542 24899999999887542 256
Q ss_pred CceEEEEcCCCCCCCC----Cc--------cCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhC
Q 022451 175 SYDVIIGDLADPIEGG----PC--------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~----p~--------~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (297)
+||+|++|++-..... |. ..-...++++. +.+.|+|||.+++.+++.. ..+ ...+++.+-+.+
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~stcs~~---~~e-ne~~v~~~l~~~ 230 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDI-GIDLLKKDGELVYSTCSME---VEE-NEEVIKYILQKR 230 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHH-HHHHEEEEEEEEEEESCCC---TTS-SHHHHHHHHHHC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEECCCC---hHH-hHHHHHHHHHhC
Confidence 8999999976211000 00 00122578888 7899999999998875431 111 134444444455
Q ss_pred Ccee
Q 022451 243 KYVV 246 (297)
Q Consensus 243 ~~v~ 246 (297)
+...
T Consensus 231 ~~~~ 234 (274)
T 3ajd_A 231 NDVE 234 (274)
T ss_dssp SSEE
T ss_pred CCcE
Confidence 5543
No 89
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=1.2e-11 Score=108.27 Aligned_cols=124 Identities=12% Similarity=0.104 Sum_probs=93.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++.... -+++++++.+|+.+.+. ..+.||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~-~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN---LGKNVKFFNVDFKDAEV-PEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT---CCTTEEEECSCTTTSCC-CTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC---CCCcEEEEEcChhhccc-CCCcccEEE
Confidence 46789999999999999999987 5799999999999999999876432 13689999999877541 235799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
++++++. ++++. +.+.|+|||.+++... ..+....+.+.+++.|..+..+
T Consensus 164 ~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~f~~~~~~ 213 (248)
T 2yvl_A 164 VDVREPW-----------HYLEK-VHKSLMEGAPVGFLLP------TANQVIKLLESIENYFGNLEVV 213 (248)
T ss_dssp ECSSCGG-----------GGHHH-HHHHBCTTCEEEEEES------SHHHHHHHHHHSTTTEEEEEEE
T ss_pred ECCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHhhCCcceEE
Confidence 9865321 45677 7899999999998752 2345556666666545554443
No 90
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.31 E-value=7.6e-12 Score=107.50 Aligned_cols=152 Identities=13% Similarity=-0.011 Sum_probs=102.9
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++.+.... .++++++.+|+...- ...++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~ 109 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENKIP-LPDNTVDF 109 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTBCS-SCSSCEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEecccccCC-CCCCCeeE
Confidence 3567899999999999999998864 56799999999999999999876542 257999999986532 23578999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCC-Cc-----CCchHHHHHHHHHHhh-CCceeEEEEe
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG-IF-----SHTEVFSCIYNTLRQV-FKYVVPYSAH 251 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~-~~-----~~~~~~~~i~~~l~~~-F~~v~~~~~~ 251 (297)
|++...-.. .+ ....+++. +.+.|+|||.+++....+. .. ...-....+.+.+++. |..+....
T Consensus 110 v~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-- 180 (219)
T 3dh0_A 110 IFMAFTFHE--LS----EPLKFLEE-LKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE-- 180 (219)
T ss_dssp EEEESCGGG--CS----SHHHHHHH-HHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE--
T ss_pred EEeehhhhh--cC----CHHHHHHH-HHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe--
Confidence 998765322 11 12578898 7999999999988642110 00 0111235566667665 65544322
Q ss_pred cCccCCceeEEEEecCC
Q 022451 252 IPSFADTWGWIMVSIYN 268 (297)
Q Consensus 252 vp~~~~~~~~~~as~~~ 268 (297)
++..+.++++.|..
T Consensus 181 ---~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 181 ---VGKYCFGVYAMIVK 194 (219)
T ss_dssp ---ETTTEEEEEEECC-
T ss_pred ---eCCceEEEEEEecc
Confidence 12335556666554
No 91
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.30 E-value=5.3e-12 Score=108.83 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=82.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|.++..+++..+ +++++|+++.+++.|++++... .++++++.+|+.+. ....++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKL-SFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcC-CCCCCcEEEEE
Confidence 4578999999999999999988743 8999999999999999987644 26899999998763 22346899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-... .. --..++++. +++.|+|||.+++..
T Consensus 109 ~~~~~~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 109 FIDSIVHF-EP---LELNQVFKE-VRRVLKPSGKFIMYF 142 (227)
T ss_dssp EESCGGGC-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCchHhC-CH---HHHHHHHHH-HHHHcCCCcEEEEEe
Confidence 88541110 00 012468888 799999999998874
No 92
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=1.4e-11 Score=113.69 Aligned_cols=123 Identities=12% Similarity=0.215 Sum_probs=89.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhcc-----CCC--CCCCeEEEEcchHHHHhc
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNK-----EAF--SDPRLELVINDARAELES 171 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~-----~~~--~~~rv~~~~~Da~~~l~~ 171 (297)
..++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.... ..+ ..++++++.+|+.+.+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 456789999999999999999986 455899999999999999999876310 001 126899999999875422
Q ss_pred -cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 172 -RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 172 -~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
..++||+|++|.++++ .+++. +.++|+|||.+++... .......+++.+++
T Consensus 183 ~~~~~fD~V~~~~~~~~-----------~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 183 IKSLTFDAVALDMLNPH-----------VTLPV-FYPHLKHGGVCAVYVV------NITQVIELLDGIRT 234 (336)
T ss_dssp -----EEEEEECSSSTT-----------TTHHH-HGGGEEEEEEEEEEES------SHHHHHHHHHHHHH
T ss_pred cCCCCeeEEEECCCCHH-----------HHHHH-HHHhcCCCcEEEEEeC------CHHHHHHHHHHHHh
Confidence 2457999999876543 25677 7999999999997742 34455666666665
No 93
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.30 E-value=1.7e-11 Score=123.98 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=90.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||+|||+|.++..+++. +..+|++||+|+.+++.|++++..++ +.+++++++.+|+.+++....++||+|+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG--LTGRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEEecCHHHHHHhcCCCccEEE
Confidence 36789999999999999998874 46789999999999999999988764 2336899999999999987678999999
Q ss_pred EcCCCCCCCCCccCc-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 181 GDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+|++.-......... .-.++++. +.+.|+|||+|++.+++
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~-a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKD-LKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHH-HHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECC
Confidence 998731100000011 12356777 68999999999987654
No 94
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=5.5e-12 Score=113.41 Aligned_cols=126 Identities=14% Similarity=0.053 Sum_probs=95.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++ -++++++.+|+.++ .. .++||+|
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~-~~~~D~V 190 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL-KDVADRV 190 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC-TTCEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc-cCCceEE
Confidence 356789999999999999999987556799999999999999999987653 25789999999887 43 5689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~ 243 (297)
++|++. . ..+++.. +.+.|+|||++++.+.... ....+.+....+.+.+.+.
T Consensus 191 i~d~p~----~------~~~~l~~-~~~~LkpgG~l~~s~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (272)
T 3a27_A 191 IMGYVH----K------THKFLDK-TFEFLKDRGVIHYHETVAE-KIMYERPIERLKFYAEKNG 242 (272)
T ss_dssp EECCCS----S------GGGGHHH-HHHHEEEEEEEEEEEEEEG-GGTTTHHHHHHHHHHHHTT
T ss_pred EECCcc----c------HHHHHHH-HHHHcCCCCEEEEEEcCcc-ccccccHHHHHHHHHHHhC
Confidence 999763 1 1256777 6889999999988753221 1112345566666666543
No 95
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.30 E-value=6.3e-12 Score=117.95 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=82.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~Ii 180 (297)
++++||||| |+|.++..+++..+..+|++||+|+.+++.|++++...+ + .+++++.+|+.+.+.. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g--~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG--Y--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT--C--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C--CCEEEEEChhhhhchhhccCCccEEE
Confidence 578999999 999999999886555799999999999999999987543 1 3899999999875542 245899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCc-EEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEG-IFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgG-vl~~~~ 219 (297)
+|++-.. . . ...|++. +.+.|+||| ++++.+
T Consensus 247 ~~~p~~~----~-~--~~~~l~~-~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETL----E-A--IRAFVGR-GIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSH----H-H--HHHHHHH-HHHTBCSTTCEEEEEE
T ss_pred ECCCCch----H-H--HHHHHHH-HHHHcccCCeEEEEEE
Confidence 9975321 1 2 2689999 799999999 434443
No 96
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.30 E-value=6.1e-12 Score=111.32 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=82.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+...+ .++++++.+|+.+. ...+++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~l-~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQM-PFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-CC-CSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHhC-CCCCCCEEEE
Confidence 3577899999999999999999874 499999999999999999875432 25799999998663 3345789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++...-.+... -..+++. +++.|+|||.+++.
T Consensus 108 ~~~~~l~~~~d------~~~~l~~-~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 108 TCRIAAHHFPN------PASFVSE-AYRVLKKGGQLLLV 139 (260)
T ss_dssp EEESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEhhhhHhcCC------HHHHHHH-HHHHcCCCCEEEEE
Confidence 99855322111 2478898 89999999999875
No 97
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=4.8e-12 Score=114.35 Aligned_cols=146 Identities=16% Similarity=0.105 Sum_probs=100.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++++|||+|||+|.++..+++. +..+|+++|+||.+++.++++...++. ..+++++.+|++++.. ...||.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v---~~~v~~~~~D~~~~~~--~~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG--ENIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC--CSCEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEeCcHHHhcc--ccCCCEE
Confidence 367889999999999999999886 457899999999999999999887652 4689999999998864 4689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEE-ecCcc-CC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSA-HIPSF-AD 257 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~-~vp~~-~~ 257 (297)
+++++.. +.+|+.. +.++|++||++.+....+...........+.+..++....+..... .+.+| |.
T Consensus 197 i~~~p~~----------~~~~l~~-a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~ 265 (278)
T 3k6r_A 197 LMGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPG 265 (278)
T ss_dssp EECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTT
T ss_pred EECCCCc----------HHHHHHH-HHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEEEEEEeECcC
Confidence 9997521 2367777 6789999999876542211111122233444444444444443321 34444 34
Q ss_pred ceeEE
Q 022451 258 TWGWI 262 (297)
Q Consensus 258 ~~~~~ 262 (297)
.|.++
T Consensus 266 ~~hvv 270 (278)
T 3k6r_A 266 VWHVV 270 (278)
T ss_dssp EEEEE
T ss_pred ccEEE
Confidence 45444
No 98
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.29 E-value=3.3e-11 Score=107.11 Aligned_cols=120 Identities=15% Similarity=0.150 Sum_probs=91.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||+|||+|.++..+++.. . +|+++|+||.+++.|++++..++ -. ++++.+|+.+.+. .++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~~~~~----~~-v~~~~~d~~~~~~--~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANAKRNG----VR-PRFLEGSLEAALP--FGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHHHHTT----CC-CEEEESCHHHHGG--GCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChhhcCc--CCCCCEEE
Confidence 567899999999999999988864 3 99999999999999999887553 12 8999999988653 46799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCce
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYV 245 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v 245 (297)
++...+ . -..+++. +.+.|+|||.+++... .......+.+.+++. |..+
T Consensus 190 ~n~~~~-------~--~~~~l~~-~~~~LkpgG~lils~~------~~~~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 190 ANLYAE-------L--HAALAPR-YREALVPGGRALLTGI------LKDRAPLVREAMAGAGFRPL 239 (254)
T ss_dssp EECCHH-------H--HHHHHHH-HHHHEEEEEEEEEEEE------EGGGHHHHHHHHHHTTCEEE
T ss_pred ECCcHH-------H--HHHHHHH-HHHHcCCCCEEEEEee------ccCCHHHHHHHHHHCCCEEE
Confidence 975421 1 2478888 7999999999988642 122345666777765 5543
No 99
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.29 E-value=1.6e-11 Score=109.81 Aligned_cols=150 Identities=11% Similarity=0.123 Sum_probs=101.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhc-------CCC-----cEEEEEECCH---HH-----------HHHHHhhhhh-cc---
Q 022451 101 PNPKTIFIMGGGEGSTAREILRH-------KTV-----EKVVMCDIDE---EV-----------VEFCKSYLVV-NK--- 150 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-------~~~-----~~v~~VEid~---~v-----------i~~a~~~f~~-~~--- 150 (297)
.++.+||+||+|+|..+..+++. .|. .+++++|.+| +. .+.|++.+.. +.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999988776542 332 5899999997 33 3355554431 00
Q ss_pred ----CCCCC--CCeEEEEcchHHHHhccCC----CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 151 ----EAFSD--PRLELVINDARAELESRKE----SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 151 ----~~~~~--~rv~~~~~Da~~~l~~~~~----~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
..+.+ .+++++.+|+++.+..... +||+|++|++.|.. . ..+++.++|+. +.++|+|||+|++.+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~--p~lw~~~~l~~-l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-N--PDMWTQNLFNA-MARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-C--GGGCCHHHHHH-HHHHEEEEEEEEESCC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-C--hhhcCHHHHHH-HHHHcCCCcEEEEEeC
Confidence 00222 3578999999998876433 79999999987652 2 37899999999 8999999999997542
Q ss_pred CCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCCceeEEEEecCCC
Q 022451 221 PAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFADTWGWIMVSIYNP 269 (297)
Q Consensus 221 ~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~~~~~~~as~~~~ 269 (297)
. ..+.+.|.+. |. + ..+|.++.....+.+.+.+.
T Consensus 215 -------a---~~vrr~L~~aGF~-v----~~~~g~~~kr~m~~a~~~~~ 249 (257)
T 2qy6_A 215 -------A---GFVRRGLQEAGFT-M----QKRKGFGRKREMLCGVMEQT 249 (257)
T ss_dssp -------B---HHHHHHHHHHTEE-E----EEECCSTTCCCEEEEEEC--
T ss_pred -------C---HHHHHHHHHCCCE-E----EeCCCCCCCCceEEEEecCc
Confidence 1 2455666665 43 2 24566665566777776654
No 100
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.29 E-value=1.4e-11 Score=110.11 Aligned_cols=127 Identities=17% Similarity=0.199 Sum_probs=95.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
..++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. -.++++++.+|+.+.. ...+.||
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~-~~~~~~D 173 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSE-LPDGSVD 173 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCC-CCTTCEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcC-CCCCcee
Confidence 356779999999999999999984 45679999999999999999987533 10 1268999999987652 2246799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh--hCCceeE
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ--VFKYVVP 247 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~--~F~~v~~ 247 (297)
+|+++.++++ ++++. +.+.|+|||.+++... ..+....+...+++ .|.....
T Consensus 174 ~v~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~~~~f~~~~~ 227 (280)
T 1i9g_A 174 RAVLDMLAPW-----------EVLDA-VSRLLVAGGVLMVYVA------TVTQLSRIVEALRAKQCWTEPRA 227 (280)
T ss_dssp EEEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHHSSBCCCEE
T ss_pred EEEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHhcCCcCCcEE
Confidence 9999876432 56777 7899999999998752 33456677777775 3554433
No 101
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.1e-11 Score=112.26 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=85.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-----CC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-----~~ 174 (297)
.++.+|||||||+|..+..+++.. +..+|++||+++.+++.|++.+.... ...++++++.+|+.+.-... .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP--DTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc--CCCCceEEEEcCHHhCCccccccccCC
Confidence 578899999999999999999753 67899999999999999999876430 02478999999987643221 26
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+||+|++...-++ +--..+++. ++++|+|||.+++.
T Consensus 113 ~fD~V~~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 113 KIDMITAVECAHW-------FDFEKFQRS-AYANLRKDGTIAIW 148 (299)
T ss_dssp CEEEEEEESCGGG-------SCHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CeeEEeHhhHHHH-------hCHHHHHHH-HHHhcCCCcEEEEE
Confidence 8999999865332 123578998 89999999999874
No 102
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=3.9e-11 Score=112.94 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=87.9
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCceE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD~ 178 (297)
.+++|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++.. ...+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~----~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG----LGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT----CTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 6689999999999999999986 5799999999999999999987663 23499999999998754 2578999
Q ss_pred EEEcCCCCCCCCCccCc-----ccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 179 IIGDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
|++|++.-.. .+ ..+ .-.+++.. +.+.|+|||++++.+.+.
T Consensus 283 Ii~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 283 VVLDPPAFAK-GK-KDVERAYRAYKEVNLR-AIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEECCCCSCC-ST-TSHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCC-Ch-hHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCC
Confidence 9999873210 11 111 12357777 789999999999887654
No 103
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.28 E-value=5.9e-12 Score=112.24 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=86.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++..+..+|++||+++.+++.|++.+.... -++++++.+|+.... ...++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSLP-FEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGCC-SCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccCC-CCCCCeeEEE
Confidence 56789999999999999999988777899999999999999999876542 257999999987642 3457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-..... ...+++. +++.|+|||++++..
T Consensus 111 ~~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFVLEHLQS------PEEALKS-LKKVLKPGGTITVIE 142 (276)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EechhhhcCC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 9765322111 2378888 899999999998864
No 104
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=8.3e-11 Score=111.25 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=84.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||+|||+|..+..+++. + .+|++||+|+.+++.|++++..++. ..++..+|+.+++....++||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-g-a~V~avDis~~al~~a~~n~~~ng~-----~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-G-AYALAVDKDLEALGVLDQAALRLGL-----RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc-C-CeEEEEECCHHHHHHHHHHHHHhCC-----CCcEEEccHHHHHHHhcCCCCEEE
Confidence 34789999999999999999986 3 4499999999999999999876641 135779999999876444599999
Q ss_pred EcCCCCCCCCCccCc-----ccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 181 GDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
+|++.-.. .. ..+ ...++++. +.+.|+|||+|++.++++
T Consensus 286 ~dpP~f~~-~~-~~~~~~~~~~~~ll~~-a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 286 LDPPTLVK-RP-EELPAMKRHLVDLVRE-ALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ECCCCCCS-SG-GGHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred ECCCcCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCC
Confidence 99863110 11 111 11367777 689999999998776554
No 105
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=1.3e-11 Score=105.56 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=81.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++...+ -++++++.+|+.+.... .++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQGWQA-RAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccCCcc-CCCccEE
Confidence 456789999999999999999987 4799999999999999999887542 25799999999875543 4789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+++...+. .+ . . +.+.|+|||.+++...
T Consensus 148 ~~~~~~~~--~~-----~-----~-~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 148 IVTAAPPE--IP-----T-----A-LMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESSBCSS--CC-----T-----H-HHHTEEEEEEEEEEEC
T ss_pred EEccchhh--hh-----H-----H-HHHhcccCcEEEEEEc
Confidence 99865332 11 1 3 5789999999999864
No 106
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.27 E-value=7.2e-11 Score=111.53 Aligned_cols=118 Identities=23% Similarity=0.217 Sum_probs=89.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
..+++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++..++ +.+++++++.+|+.+++.. ...+||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 467899999999999999999863 5799999999999999999987653 1023899999999998754 246899
Q ss_pred EEEEcCCCCCCC--CCcc-CcccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 178 VIIGDLADPIEG--GPCY-KLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 178 ~Ii~D~~~~~~~--~p~~-~L~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
+|++|++..... .... .-.-.+++.. +.+.|+|||++++.+++.
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINML-AIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCC
Confidence 999998732100 0000 0112467777 689999999999887654
No 107
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=5e-12 Score=111.31 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=82.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++. .++++++.+|+.++. .+++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---------~~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---------LPNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---------STTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---------CCCcEEEECChhhcC--ccCCcCEEE
Confidence 567899999999999999999875667999999999999999986 157899999987653 457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-++. + --..+++. +.+.|+|||.+++..
T Consensus 101 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQWV--P----DHLAVLSQ-LMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGGS--T----THHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EeCchhhC--C----CHHHHHHH-HHHhcCCCeEEEEEe
Confidence 97653321 1 12478888 899999999999875
No 108
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.27 E-value=3.3e-11 Score=103.57 Aligned_cols=102 Identities=17% Similarity=0.066 Sum_probs=80.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++. ..+++++|+++.+++.|++.+. ++++++.+|+.++. .. ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~-~~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFE-VP-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCC-CC-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcC-CC-CCeEEEE
Confidence 46789999999999999999986 4699999999999999998753 47889999987643 22 7899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ ......+++. +++.|+|||.+++..
T Consensus 112 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 112 STYAFHH--LT--DDEKNVAIAK-YSQLLNKGGKIVFAD 145 (220)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred ECcchhc--CC--hHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 9854222 11 1111348888 799999999999874
No 109
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.26 E-value=1.5e-11 Score=100.95 Aligned_cols=144 Identities=18% Similarity=0.261 Sum_probs=94.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH-----h--cc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-----E--SR 172 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l-----~--~~ 172 (297)
.++.+|||+|||+|.++..+++. .+..+++++|+++ +++. ++++++.+|+.+.- . ..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 56779999999999999999986 3457999999999 6421 57899999987641 1 23
Q ss_pred CCCceEEEEcCCCCCCCCCcc-Cc----ccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE
Q 022451 173 KESYDVIIGDLADPIEGGPCY-KL----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP 247 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~p~~-~L----~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (297)
+++||+|+++.+-+....+.. .. ....+++. +.+.|+|||.+++.... ......+.+.+++.|..+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~~~~~~~ 158 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEM-CRDVLAPGGSFVVKVFQ------GEGFDEYLREIRSLFTKVKV 158 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEES------STTHHHHHHHHHHHEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHH-HHHHcCCCcEEEEEEec------CCcHHHHHHHHHHhhhhEEe
Confidence 468999999876433111100 00 01478888 79999999999886421 22345666777777776654
Q ss_pred EEEecCccCCceeEEEEec
Q 022451 248 YSAHIPSFADTWGWIMVSI 266 (297)
Q Consensus 248 ~~~~vp~~~~~~~~~~as~ 266 (297)
...........-.+++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~ 177 (180)
T 1ej0_A 159 RKPDSSRARSREVYIVATG 177 (180)
T ss_dssp ECCTTSCTTCCEEEEEEEE
T ss_pred ecCCcccccCceEEEEEcc
Confidence 4321111122345566653
No 110
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.26 E-value=7.8e-12 Score=112.53 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=85.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++.+... .++++++.+|+.++. ..++||+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~ 92 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--LNDKYDI 92 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--CSSCEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--cCCCeeE
Confidence 35789999999999999999998755 479999999999999999987643 248999999998643 2468999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 93 v~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 93 AICHAFLLH--MT----TPETMLQK-MIHSVKKGGKIICFE 126 (284)
T ss_dssp EEEESCGGG--CS----SHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEECChhhc--CC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 999865322 11 12478898 799999999998764
No 111
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.26 E-value=4.8e-12 Score=111.45 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=78.6
Q ss_pred CCCeEEEEccchhHHHHHHHhc----CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhccC-C
Q 022451 102 NPKTIFIMGGGEGSTAREILRH----KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRK-E 174 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~--l~~~~-~ 174 (297)
++.+||+||||+|.++..+++. .+..+|++||+++.+++.|+. . .++++++.+|+.+. +.... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c------CCceEEEECcchhHHHHHhhccC
Confidence 4689999999999999998876 567899999999999988872 1 26899999999875 43323 3
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcc-cCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKP-RLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~-~L~pgGvl~~~~ 219 (297)
+||+|++|.... ....+++. +.+ +|+|||+|++..
T Consensus 152 ~fD~I~~d~~~~---------~~~~~l~~-~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA---------NTFNIMKW-AVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS---------SHHHHHHH-HHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH---------hHHHHHHH-HHHhhCCCCCEEEEEe
Confidence 799999987521 12467888 686 999999999863
No 112
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.26 E-value=1.5e-11 Score=109.56 Aligned_cols=110 Identities=12% Similarity=-0.010 Sum_probs=79.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-------c-CC-----CCCCCeEEEEcchHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-------K-EA-----FSDPRLELVINDARA 167 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~-------~-~~-----~~~~rv~~~~~Da~~ 167 (297)
.++.+|||+|||+|..+..+++. ..+|++||+++.+++.|++..... . .. -..++++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 46789999999999999999986 358999999999999998754310 0 00 013689999999987
Q ss_pred HHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 168 ~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
.-....++||+|+....-.. .+. . ....+++. +.++|+|||++++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~--l~~-~-~~~~~l~~-~~~~LkpGG~l~l 189 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVA--INP-G-DHDRYADI-ILSLLRKEFQYLV 189 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTT--SCG-G-GHHHHHHH-HHHTEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhh--CCH-H-HHHHHHHH-HHHHcCCCeEEEE
Confidence 54322378999997643221 121 1 13468888 8999999999853
No 113
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.26 E-value=1e-11 Score=112.59 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=82.4
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-----------------------------
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----------------------------- 152 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~----------------------------- 152 (297)
.+++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999877789999999999999999986422100
Q ss_pred -------------------------CCCCCeEEEEcchHHH----HhccCCCceEEEEcCCCCCCCCCccCcccHHHHHH
Q 022451 153 -------------------------FSDPRLELVINDARAE----LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEF 203 (297)
Q Consensus 153 -------------------------~~~~rv~~~~~Da~~~----l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~ 203 (297)
--..+++++.+|.... +....++||+|++.....+.......---..+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0014899999997532 22245789999987542110000000022468888
Q ss_pred HHcccCCCCcEEEEec
Q 022451 204 VVKPRLNPEGIFVTQA 219 (297)
Q Consensus 204 ~~~~~L~pgGvl~~~~ 219 (297)
+.++|+|||+|++..
T Consensus 206 -~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 -IYRHLRPGGILVLEP 220 (292)
T ss_dssp -HHHHEEEEEEEEEEC
T ss_pred -HHHHhCCCcEEEEec
Confidence 799999999999874
No 114
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.26 E-value=4.1e-11 Score=104.93 Aligned_cols=107 Identities=19% Similarity=0.221 Sum_probs=83.7
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
...++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+...+ -++++++.+|+.. +...+++||+
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~-~~~~~~~fD~ 90 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAES-LPFPDDSFDI 90 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTB-CCSCTTCEEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEeccccc-CCCCCCcEEE
Confidence 34678899999999999999999864 489999999999999999876442 2579999999865 3334578999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++...-.. .+ . -..+++. +++.|+|||.+++..
T Consensus 91 v~~~~~l~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 91 ITCRYAAHH--FS--D--VRKAVRE-VARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEESCGGG--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEECCchhh--cc--C--HHHHHHH-HHHHcCCCcEEEEEE
Confidence 999854222 11 1 2478888 799999999998754
No 115
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.26 E-value=5.5e-12 Score=108.28 Aligned_cols=108 Identities=11% Similarity=0.027 Sum_probs=77.3
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC--------CCCCCCeEEEEcchHHHHhc
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE--------AFSDPRLELVINDARAELES 171 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~--------~~~~~rv~~~~~Da~~~l~~ 171 (297)
.+++.+|||+|||+|..+..+++. ..+|++||+++.|++.|++....... .+..++++++++|+.+.-..
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 357789999999999999999986 35899999999999999987542100 00136899999998764321
Q ss_pred cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcE
Q 022451 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGI 214 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGv 214 (297)
..++||+|++...-.. .+. -....+++. ++++|+|||.
T Consensus 98 ~~~~fD~v~~~~~l~~--l~~--~~~~~~l~~-~~r~LkpgG~ 135 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIA--LPA--DMRERYVQH-LEALMPQACS 135 (203)
T ss_dssp HHHSEEEEEEESCGGG--SCH--HHHHHHHHH-HHHHSCSEEE
T ss_pred cCCCEEEEEECcchhh--CCH--HHHHHHHHH-HHHHcCCCcE
Confidence 1157999997543211 110 012357888 8999999997
No 116
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.26 E-value=9.1e-11 Score=103.28 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=103.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCCCc
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~~y 176 (297)
..++.+||+||||+|.++..+++. .+..+|++||+++++++.+++.... .+++..+.+|+...-. .....+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccceE
Confidence 467789999999999999999985 5678999999999999999886532 3689999999865432 234789
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCC---CcCCchHHHHHHHHHHhh-CCceeEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQV-FKYVVPYSAHI 252 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~---~~~~~~~~~~i~~~l~~~-F~~v~~~~~~v 252 (297)
|+|++|.+.|. . ...++.. +++.|||||.+++...... .......+++..+.|++. |.-+.. ..+
T Consensus 149 DvVf~d~~~~~--~------~~~~l~~-~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~--i~L 217 (233)
T 4df3_A 149 DGLYADVAQPE--Q------AAIVVRN-ARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV--VHL 217 (233)
T ss_dssp EEEEECCCCTT--H------HHHHHHH-HHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE--EEC
T ss_pred EEEEEeccCCh--h------HHHHHHH-HHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE--Ecc
Confidence 99999987543 1 2467888 7999999999887531100 001234566677777765 654432 234
Q ss_pred CccCCceeEEEE
Q 022451 253 PSFADTWGWIMV 264 (297)
Q Consensus 253 p~~~~~~~~~~a 264 (297)
..|......+++
T Consensus 218 ~pf~~~H~lv~~ 229 (233)
T 4df3_A 218 DPFDRDHAMIYA 229 (233)
T ss_dssp TTTSTTEEEEEE
T ss_pred CCCCCceEEEEE
Confidence 445433444444
No 117
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.26 E-value=4.2e-11 Score=102.44 Aligned_cols=150 Identities=15% Similarity=0.061 Sum_probs=98.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++.+ +++++.+|+...- ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC--CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC--CCCcEEEEE
Confidence 56789999999999999999986 458999999999999999875 3567788876543 567899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCc--------CCchHHHHHHHHHHhh--CCceeEEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF--------SHTEVFSCIYNTLRQV--FKYVVPYSA 250 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~--------~~~~~~~~i~~~l~~~--F~~v~~~~~ 250 (297)
+...-.. .+. -.-..+++. +++.|+|||++++........ ...-....+.+.+++. |..+.....
T Consensus 108 ~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 108 AHACLLH--VPR--DELADVLKL-IWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp ECSCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred ecCchhh--cCH--HHHHHHHHH-HHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 8754211 110 012368888 799999999998875321100 0011345566666665 676655443
Q ss_pred ecCccC---CceeEEEEecCCC
Q 022451 251 HIPSFA---DTWGWIMVSIYNP 269 (297)
Q Consensus 251 ~vp~~~---~~~~~~~as~~~~ 269 (297)
....+. ..|.+++..+.+.
T Consensus 183 ~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 183 EGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp EEECTTSCEEEEEEEEEECCCC
T ss_pred cCCCCCCCCceEEEEEEecCcc
Confidence 333332 2354454444443
No 118
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.26 E-value=1.2e-11 Score=107.70 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=80.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+. ++++++.+|+.+. ..+++||+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------~~v~~~~~d~~~~--~~~~~fD~v~ 108 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK--------DGITYIHSRFEDA--QLPRRYDNIV 108 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC--------SCEEEEESCGGGC--CCSSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh--------CCeEEEEccHHHc--CcCCcccEEE
Confidence 467899999999999999999864 379999999999999998752 1799999998876 2457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHc-ccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVK-PRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~-~~L~pgGvl~~~~ 219 (297)
+...-.. .+ . ...+++. ++ ++|+|||.+++..
T Consensus 109 ~~~~l~~--~~--~--~~~~l~~-~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 109 LTHVLEH--ID--D--PVALLKR-INDDWLAEGGRLFLVC 141 (250)
T ss_dssp EESCGGG--CS--S--HHHHHHH-HHHTTEEEEEEEEEEE
T ss_pred EhhHHHh--hc--C--HHHHHHH-HHHHhcCCCCEEEEEc
Confidence 8754222 11 1 2478999 89 9999999998875
No 119
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.25 E-value=5.8e-11 Score=114.43 Aligned_cols=135 Identities=11% Similarity=0.064 Sum_probs=97.0
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
...++.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++...+ -. ++++.+|+..+.....++||
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHHCSCEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhccccCC
Confidence 345678999999999999999997643 4699999999999999999987543 24 89999999987643467899
Q ss_pred EEEEcCCCCC----CCCCccCcc-------------cHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 178 VIIGDLADPI----EGGPCYKLY-------------TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 178 ~Ii~D~~~~~----~~~p~~~L~-------------t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
+|++|++-.. ...| ...+ ..++++. +.+.|+|||+|+..+++. ..+..+.++..+.+
T Consensus 173 ~Il~D~PcSg~G~~rr~p-d~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvysTCs~----~~eEne~vv~~~l~ 246 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDR-EAARHWGPSAPKRMAEVQKALLAQ-ASRLLGPGGVLVYSTCTF----APEENEGVVAHFLK 246 (464)
T ss_dssp EEEEECCCCCGGGTTTCT-TSGGGCCTTHHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESCC----CGGGTHHHHHHHHH
T ss_pred EEEECCCcCCccccccCh-HHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeccC----chhcCHHHHHHHHH
Confidence 9999987211 0112 1111 1678888 789999999999877643 22223444555444
Q ss_pred hCCc
Q 022451 241 VFKY 244 (297)
Q Consensus 241 ~F~~ 244 (297)
.+++
T Consensus 247 ~~~~ 250 (464)
T 3m6w_A 247 AHPE 250 (464)
T ss_dssp HCTT
T ss_pred HCCC
Confidence 5554
No 120
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.25 E-value=2.7e-11 Score=107.69 Aligned_cols=108 Identities=15% Similarity=0.109 Sum_probs=84.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+...+ ..++++++.+|+.+. ...+++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG---LANRVTFSYADAMDL-PFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECccccC-CCCCCCccEE
Confidence 3567899999999999999998865 4799999999999999999876432 135899999998663 2335789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ . ...+++. +++.|+|||.+++..
T Consensus 134 ~~~~~l~~--~~--~--~~~~l~~-~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHH--MP--D--RGRALRE-MARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTT--SS--C--HHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EEechhhh--CC--C--HHHHHHH-HHHHcCCCeEEEEEE
Confidence 98654322 11 1 2578898 899999999998765
No 121
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.24 E-value=3.1e-11 Score=101.77 Aligned_cols=106 Identities=12% Similarity=0.090 Sum_probs=82.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+||+||||+|..+..+++. ..+++++|+++.+++.|++.+.... .++++++.+|+.+.- . .++||+|
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~-~~~~D~v 101 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLT-F-DRQYDFI 101 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCC-C-CCCEEEE
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCC-C-CCCceEE
Confidence 346789999999999999999986 4599999999999999999876442 257999999987643 2 5789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++...-.. .+.. ....+++. +.+.|+|||.+++.
T Consensus 102 ~~~~~l~~--~~~~--~~~~~l~~-~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 102 LSTVVLMF--LEAK--TIPGLIAN-MQRCTKPGGYNLIV 135 (199)
T ss_dssp EEESCGGG--SCGG--GHHHHHHH-HHHTEEEEEEEEEE
T ss_pred EEcchhhh--CCHH--HHHHHHHH-HHHhcCCCeEEEEE
Confidence 98864222 1101 13578888 79999999997654
No 122
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=5.4e-11 Score=112.34 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=88.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
..+++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++. +++++++.+|+.+++.. ...+||
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~---~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV---EDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEECCHHHHHHHHHhhCCCCC
Confidence 36789999999999999999986 467999999999999999999876531 23899999999988753 256899
Q ss_pred EEEEcCCCCCCCCCccCc-----ccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 178 VIIGDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
+|++|++.-.. .. ..+ ...+++.. +.+.|+|||++++.++++
T Consensus 292 ~Vi~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 292 IVVLDPPAFVQ-HE-KDLKAGLRAYFNVNFA-GLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEEECCCCSCS-SG-GGHHHHHHHHHHHHHH-HHTTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCC
Confidence 99999863210 11 111 12357777 789999999998876554
No 123
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.23 E-value=1.1e-10 Score=102.83 Aligned_cols=150 Identities=16% Similarity=0.153 Sum_probs=93.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCCCc
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~~y 176 (297)
..++.+|||+|||+|..+..+++. .+..+|++||+++.+++...+.... .+++.++.+|++.... ...++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccce
Confidence 356789999999999999988875 3467999999999886443322111 2579999999875321 124689
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCC---CcCCchHHHHHHHHHHhh-CCceeEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQV-FKYVVPYSAHI 252 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~---~~~~~~~~~~i~~~l~~~-F~~v~~~~~~v 252 (297)
|+|++|.+.+. ....+... +++.|+|||.|++...+++ .....+.+......+++. |.-+. ...+
T Consensus 148 D~I~~d~a~~~--------~~~il~~~-~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~--~~~l 216 (232)
T 3id6_C 148 DVLYVDIAQPD--------QTDIAIYN-AKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQ--IINL 216 (232)
T ss_dssp EEEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEE--EEEC
T ss_pred EEEEecCCChh--------HHHHHHHH-HHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEE--Eecc
Confidence 99999976432 11223444 5669999999987642221 011223345566666654 43322 1344
Q ss_pred CccCCceeEEEEec
Q 022451 253 PSFADTWGWIMVSI 266 (297)
Q Consensus 253 p~~~~~~~~~~as~ 266 (297)
.+|.....++++.+
T Consensus 217 ~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 217 DPYDKDHAIVLSKY 230 (232)
T ss_dssp TTTCSSCEEEEEEE
T ss_pred CCCcCceEEEEEEe
Confidence 44544455565554
No 124
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.23 E-value=1.7e-11 Score=107.95 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=82.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+. .++++++.+|+... ....++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~ 113 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI-AIEPDAYNVVL 113 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC-CCCTTCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC-CCCCCCeEEEE
Confidence 367899999999999999999874 3499999999999999998764 36899999998653 33457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-... + .-..+++. +++.|+|||.+++..
T Consensus 114 ~~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALHYI--A----SFDDICKK-VYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Echhhhhh--h----hHHHHHHH-HHHHcCCCcEEEEEe
Confidence 97642221 1 12478888 799999999999864
No 125
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.23 E-value=7.8e-11 Score=108.11 Aligned_cols=117 Identities=15% Similarity=0.055 Sum_probs=87.0
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+..+.. ..++||
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~~~~fD 189 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-LNVEFD 189 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-GCCCEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-ccccCC
Confidence 34567899999999999999999764 34799999999999999999886542 2479999999987643 356899
Q ss_pred EEEEcCCCC-C---CCCCcc-Ccc-----------cHHHHHHHHcccCCCCcEEEEecCC
Q 022451 178 VIIGDLADP-I---EGGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 178 ~Ii~D~~~~-~---~~~p~~-~L~-----------t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+|++|++-. . ...|.. ..+ ..++++. +.+.|+|||.+++.+++
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~-~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEK-GLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEeCC
Confidence 999997621 1 001100 001 1478888 78999999999987654
No 126
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=2.7e-11 Score=102.97 Aligned_cols=100 Identities=8% Similarity=0.016 Sum_probs=80.0
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+.+|||||||+|.++..+++. ..++++||+++.+++.|++.+ ++++++.+|+.+. ....++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-SDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-GGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-ccCCCCeEEEEeh
Confidence 789999999999999999986 358999999999999999862 5789999998774 3345789999997
Q ss_pred CCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..-.. .+.. .-..+++. +.++|+|||.+++..
T Consensus 110 ~~l~~--~~~~--~~~~~l~~-~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIH--MGPG--ELPDALVA-LRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTT--CCTT--THHHHHHH-HHHTEEEEEEEEEEE
T ss_pred hhHhc--CCHH--HHHHHHHH-HHHHcCCCcEEEEEE
Confidence 54222 1101 12478888 799999999998875
No 127
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=2.9e-11 Score=103.10 Aligned_cols=142 Identities=14% Similarity=0.135 Sum_probs=92.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-----Hhc-c--
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-----LES-R-- 172 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-----l~~-~-- 172 (297)
.++.+|||||||+|.++..+++. ..+|++||++|.. ..++++++.+|+.+. +.. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 56789999999999999999986 5799999999741 126899999997542 111 0
Q ss_pred --CCCceEEEEcCCCCCCCCCc-cCc----ccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCce
Q 022451 173 --KESYDVIIGDLADPIEGGPC-YKL----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYV 245 (297)
Q Consensus 173 --~~~yD~Ii~D~~~~~~~~p~-~~L----~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (297)
.++||+|++|.+........ ... .-...++. +.+.|+|||.|++..- ..+....+...+++.|..|
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~-a~~~LkpGG~lv~k~~------~~~~~~~~~~~l~~~F~~v 159 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEI-AVRYLRNGGNVLLKQF------QGDMTNDFIAIWRKNFSSY 159 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEE------CSTHHHHHHHHHGGGEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEc------CCCCHHHHHHHHHHhcCEE
Confidence 14899999998532211100 000 01345666 6899999999998752 2234567888899899988
Q ss_pred eEEEEecCccC-CceeEEEEecC
Q 022451 246 VPYSAHIPSFA-DTWGWIMVSIY 267 (297)
Q Consensus 246 ~~~~~~vp~~~-~~~~~~~as~~ 267 (297)
..+. +..+.. ..-.|++|...
T Consensus 160 ~~~k-P~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 160 KISK-PPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp EEEC-C------CCEEEEEEEEE
T ss_pred EEEC-CCCccCCCceEEEEEeee
Confidence 7553 222222 22356666543
No 128
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.22 E-value=9.3e-12 Score=109.73 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=82.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. ..+|++||+++.+++.|++.+... ++++++.+|+.+. ....++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK-EFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC-CCCCCcEEEEe
Confidence 467899999999999999999864 469999999999999999876422 6899999998764 33457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ .-.-..+++. +++.|+|||.+++..
T Consensus 126 ~~~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILA--LS--LENKNKLFQK-CYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHHHHHh--cC--hHHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 9754222 11 0122468888 799999999998875
No 129
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.22 E-value=2.9e-11 Score=103.42 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=81.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++. ..++++++.+|+.++ ...++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~--~~~~~~D~v 111 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW--TPDRQWDAV 111 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC--CCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC--CCCCceeEE
Confidence 355679999999999999999987 46999999999999999981 136799999999876 346789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-+. .+. . ....+++. +++.|+|||.+++..
T Consensus 112 ~~~~~l~~--~~~-~-~~~~~l~~-~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 112 FFAHWLAH--VPD-D-RFEAFWES-VRSAVAPGGVVEFVD 146 (218)
T ss_dssp EEESCGGG--SCH-H-HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEechhhc--CCH-H-HHHHHHHH-HHHHcCCCeEEEEEe
Confidence 99754221 110 0 01578888 799999999998875
No 130
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.22 E-value=3.5e-11 Score=105.37 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=92.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|+++...++ -..+++++.+|+.+.+.. .++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG---LKEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECchhhhccc-CcCCCEEE
Confidence 56679999999999999999998777899999999999999999987654 135899999999776643 23699988
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
+.- ....+ -.+++.. +.+.|+++|.|+++.. .. ...+.+.|.+.
T Consensus 90 iaG-------~Gg~~-i~~Il~~-~~~~L~~~~~lVlq~~-----~~---~~~vr~~L~~~ 133 (225)
T 3kr9_A 90 IAG-------MGGRL-IARILEE-GLGKLANVERLILQPN-----NR---EDDLRIWLQDH 133 (225)
T ss_dssp EEE-------ECHHH-HHHHHHH-TGGGCTTCCEEEEEES-----SC---HHHHHHHHHHT
T ss_pred EcC-------CChHH-HHHHHHH-HHHHhCCCCEEEEECC-----CC---HHHHHHHHHHC
Confidence 741 11122 3478888 7999999999999842 12 34555666654
No 131
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.22 E-value=1.6e-11 Score=107.06 Aligned_cols=104 Identities=19% Similarity=0.158 Sum_probs=79.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhccCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~--l~~~~~~yD 177 (297)
.+..+|||+|||+|.++..+++.. +..+|++||+++.+++.+.+..... ++++++.+|+.+. +....++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcEE
Confidence 456799999999999999999863 4579999999998877666654322 6799999999774 233457899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++|.+.+. ....+++. +.+.|+|||++++.+
T Consensus 150 ~V~~~~~~~~--------~~~~~~~~-~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVAQPD--------QTRIVALN-AHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEEcCCCcc--------HHHHHHHH-HHHHcCCCeEEEEEE
Confidence 9999876321 12356777 789999999998864
No 132
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.21 E-value=3.9e-11 Score=106.24 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=79.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+ ++++++.+|+.++-. .++||+|
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~--~~~fD~v 114 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRN---------PDAVLHHGDMRDFSL--GRRFSAV 114 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTCCC--SCCEEEE
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhC---------CCCEEEECChHHCCc--cCCcCEE
Confidence 3567899999999999999999863 58999999999999999864 378999999877432 5789999
Q ss_pred EEcC-CCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 180 IGDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 180 i~D~-~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++.. .-.. .+ ..-....+++. +.+.|+|||++++.
T Consensus 115 ~~~~~~l~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGH--LA-GQAELDAALER-FAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGG--SC-HHHHHHHHHHH-HHHTEEEEEEEEEC
T ss_pred EEcCchhhh--cC-CHHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 9874 2111 00 00012367888 79999999999986
No 133
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.21 E-value=1.2e-11 Score=112.47 Aligned_cols=111 Identities=17% Similarity=0.103 Sum_probs=84.0
Q ss_pred CCCCCeEEEEccchhHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREIL-RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+++.+|||||||+|..+..++ ...+..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.. . .++||+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-~-~~~fD~ 190 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA---LAGQITLHRQDAWKLD-T-REGYDL 190 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEECCGGGCC-C-CSCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECchhcCC-c-cCCeEE
Confidence 3677899999999999999985 34567899999999999999999876432 1357999999988742 2 378999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++...-.. .+ ..-....+++. +++.|+|||++++..
T Consensus 191 v~~~~~~~~--~~-~~~~~~~~l~~-~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 191 LTSNGLNIY--EP-DDARVTELYRR-FWQALKPGGALVTSF 227 (305)
T ss_dssp EECCSSGGG--CC-CHHHHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred EEECChhhh--cC-CHHHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 998654221 11 01112247898 799999999999875
No 134
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.21 E-value=1.4e-11 Score=107.78 Aligned_cols=107 Identities=22% Similarity=0.228 Sum_probs=81.9
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.... ..+++++.+|+..+. ...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT-PEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC-CCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC-CCCCCEEEEEE
Confidence 57899999999999999988764 5699999999999999999876431 257899999976643 23458999999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+..-.. .+... ...+++. +.+.|+|||++++..
T Consensus 153 ~~~l~~--~~~~~--~~~~l~~-~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 153 QWVIGH--LTDQH--LAEFLRR-CKGSLRPNGIIVIKD 185 (241)
T ss_dssp ESCGGG--SCHHH--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cchhhh--CCHHH--HHHHHHH-HHHhcCCCeEEEEEE
Confidence 854221 11000 1368888 799999999998853
No 135
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.21 E-value=2.6e-11 Score=105.57 Aligned_cols=133 Identities=17% Similarity=0.104 Sum_probs=92.1
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
++.+|||||||+|..+..+++. ..+|+++|+++.+++.|++.+.... ...+++++.+|+.++. ..++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR--PTELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC--CSSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC--CCCCeeEEEE
Confidence 4569999999999999998773 5789999999999999999875321 1357999999987753 3458999998
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcC----CchHHHHHHHHHHhh-CCcee
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS----HTEVFSCIYNTLRQV-FKYVV 246 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~----~~~~~~~i~~~l~~~-F~~v~ 246 (297)
...-.. .+ .-....+++. +++.|+|||.+++...+..... ..-....+.+.+++. |..+.
T Consensus 139 ~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 139 YVFFCA--IE--PEMRPAWAKS-MYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp ESSTTT--SC--GGGHHHHHHH-HHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred Chhhhc--CC--HHHHHHHHHH-HHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 754322 11 1123478888 7999999999987542111000 011234556666665 65444
No 136
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=4e-11 Score=107.51 Aligned_cols=106 Identities=13% Similarity=0.125 Sum_probs=81.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+...+ ..++++++.+|+.++ .++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~----~~~fD~v~ 134 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE---NLRSKRVLLAGWEQF----DEPVDRIV 134 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC---CCSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC---CCCCeEEEECChhhC----CCCeeEEE
Confidence 5678999999999999999985443 499999999999999999876432 236899999998653 27899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ .-.-..+++. +.+.|+|||.+++..
T Consensus 135 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEH--FG--HERYDAFFSL-AHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGG--TC--TTTHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeCchhh--cC--hHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 8753211 11 0112478898 799999999998875
No 137
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.20 E-value=3.7e-11 Score=107.80 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=82.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++. ..+|++||+++.+++.|++.+...+ .+++++.+|+.+... .++||+|+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~fD~i~ 189 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKEN-----LNISTALYDINAANI--QENYDFIV 189 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCGGGCCC--CSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcC-----CceEEEEeccccccc--cCCccEEE
Confidence 36789999999999999999986 3599999999999999999876542 289999999876532 67899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...-.. .+ .-....+++. ++++|+|||++++.
T Consensus 190 ~~~~~~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 190 STVVFMF--LN--RERVPSIIKN-MKEHTNVGGYNLIV 222 (286)
T ss_dssp ECSSGGG--SC--GGGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred Eccchhh--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 9865322 11 1113478898 79999999997664
No 138
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.20 E-value=3.7e-11 Score=105.11 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=79.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~I 179 (297)
+++.+|||||||+|.++..+.+. ..+|+++|+++.+++.|++. ++++.+|+.+++.. .+++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 56789999999999999998886 35799999999999999863 78899999888743 45789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
++...-.. .+.. .-..+++. +++.|+|||.+++...
T Consensus 106 ~~~~~l~~--~~~~--~~~~~l~~-~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEH--LDPE--RLFELLSL-CYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEESCGGG--SCGG--GHHHHHHH-HHHHBCTTCCEEEEEE
T ss_pred EECCchhh--CCcH--HHHHHHHH-HHHHcCCCcEEEEEeC
Confidence 98754221 1100 12578999 7999999999998763
No 139
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.20 E-value=8.6e-11 Score=113.06 Aligned_cols=118 Identities=8% Similarity=0.018 Sum_probs=88.7
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
...++.+|||+|||+|+.+..+++. .+..+|+++|+|+..++.+++++...+ -.++.++.+|+..+.....++||
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhccccCC
Confidence 3456789999999999999988875 334799999999999999999987543 24699999999987654457899
Q ss_pred EEEEcCCC-CC---CCCCc-------cC-----cccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 178 VIIGDLAD-PI---EGGPC-------YK-----LYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 178 ~Ii~D~~~-~~---~~~p~-------~~-----L~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+|++|++- .. ...|. .. -...++++. +.+.|+|||.|+..+++
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSS-AIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHH-HHHTEEEEEEEEEEESC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEEee
Confidence 99999872 11 00110 00 012367888 78999999999987764
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.20 E-value=2.1e-11 Score=106.00 Aligned_cols=92 Identities=16% Similarity=0.321 Sum_probs=75.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~I 179 (297)
+++.+|||||||+|.++..+++. ..+|+++|+++.+++.|+++ .++++++.+|+.+.+... +++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN---------APHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH---------CTTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh---------CCCceEEEcchhhccCCcCCCCEEEE
Confidence 56789999999999999999987 46999999999999999986 257999999986555444 5789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
++.. .+. .+++. +.+.|+|||.++
T Consensus 116 ~~~~------~~~------~~l~~-~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSRR------GPT------SVILR-LPELAAPDAHFL 139 (226)
T ss_dssp EEES------CCS------GGGGG-HHHHEEEEEEEE
T ss_pred EeCC------CHH------HHHHH-HHHHcCCCcEEE
Confidence 9972 121 34455 789999999998
No 141
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.20 E-value=5.4e-11 Score=110.59 Aligned_cols=114 Identities=17% Similarity=0.099 Sum_probs=86.7
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++...+ -++++++.+|+.++.. ..+.||+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g----~~~i~~~~~D~~~~~~-~~~~~D~ 275 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG----LSWIRFLRADARHLPR-FFPEVDR 275 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT----CTTCEEEECCGGGGGG-TCCCCSE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC----CCceEEEeCChhhCcc-ccCCCCE
Confidence 3567899999999999999999864 56899999999999999999987543 1389999999988643 3456999
Q ss_pred EEEcCCCCCCCCCccCc--ccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKL--YTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L--~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++|++-.........+ .-.++++. +++.|+|||.+++.+
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~-~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRG-ALALLPPGGRVALLT 317 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHH-HHHTSCTTCEEEEEE
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 99998743211111111 11468888 799999999999875
No 142
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.19 E-value=2.6e-11 Score=114.05 Aligned_cols=112 Identities=13% Similarity=0.169 Sum_probs=85.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhcc----CCCCCCCeEEEEcchHHHH-----h
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNK----EAFSDPRLELVINDARAEL-----E 170 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~----~~~~~~rv~~~~~Da~~~l-----~ 170 (297)
.++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++.... ..+..++++++.+|+.+.. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 467899999999999999998863 56799999999999999999875321 0023478999999987652 2
Q ss_pred ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+++||+|++...-.. .+ . ...+++. +++.|+|||.|++..
T Consensus 162 ~~~~~fD~V~~~~~l~~--~~--d--~~~~l~~-~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNL--ST--N--KLALFKE-IHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGG--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhc--CC--C--HHHHHHH-HHHHcCCCCEEEEEE
Confidence 23568999999865332 11 1 2478898 899999999998864
No 143
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.19 E-value=4.5e-11 Score=101.38 Aligned_cols=145 Identities=17% Similarity=0.194 Sum_probs=91.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC--CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH---------
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT--VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--------- 169 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l--------- 169 (297)
.+..+|||||||+|.++..+++..+ ..+|+++|+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 5667999999999999999998755 5899999999831 1256888888876532
Q ss_pred -------------h--ccCCCceEEEEcCCCCCCCCCccCcc-----cHHHHHHHHcccCCCCcEEEEecCCCCCcCCch
Q 022451 170 -------------E--SRKESYDVIIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTE 229 (297)
Q Consensus 170 -------------~--~~~~~yD~Ii~D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~ 229 (297)
. -...+||+|+++...++......... ...+++. +.+.|+|||.+++.... .+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~------~~ 158 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHF-MEQYINIGGTYIVKMYL------GS 158 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEEC------ST
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEeC------CC
Confidence 0 12468999999875333110000000 1236777 78999999999886421 12
Q ss_pred HHHHHHHHHHhhCCceeEEEEecCccCCceeEEEEecC
Q 022451 230 VFSCIYNTLRQVFKYVVPYSAHIPSFADTWGWIMVSIY 267 (297)
Q Consensus 230 ~~~~i~~~l~~~F~~v~~~~~~vp~~~~~~~~~~as~~ 267 (297)
....+...+++.|..+..+..........-.|++|.+.
T Consensus 159 ~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~ 196 (201)
T 2plw_A 159 QTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNF 196 (201)
T ss_dssp THHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecC
Confidence 34566777777787665432111111122356666643
No 144
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.19 E-value=3.8e-11 Score=102.26 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=82.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+||+||||+|.++..+++.. ..+|+++|+++.+++.|++.+.. .++++++.+|+.+. ...+++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL-DFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-CCCCCcccEEE
Confidence 567899999999999999999864 34899999999999999998642 36899999998764 23356899999
Q ss_pred EcCCC---------CCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLAD---------PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~---------~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...- ++.......-....+++. +.++|+|||.+++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSE-VSRVLVPGGRFISMT 159 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHH-HHHhCcCCCEEEEEe
Confidence 86431 110000000012578888 799999999999875
No 145
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.19 E-value=5.7e-11 Score=103.38 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=81.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|..+..+++. +..+++++|+++.+++.|++.+. .++++++.+|+.+.. ...++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~-~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKLH-LPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGCC-CCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhcc-CCCCCceEEE
Confidence 46789999999999999999986 33499999999999999998753 247999999987642 2357899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ --..+++. ++++|+|||.+++..
T Consensus 113 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHY--VE----DVARLFRT-VHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eeccccc--cc----hHHHHHHH-HHHhcCcCcEEEEEe
Confidence 8754221 11 12478888 799999999998864
No 146
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.19 E-value=6.8e-11 Score=102.92 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=81.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++.. ..++++++.+|+.+. ....++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~-~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG-------EGPDLSFIKGDLSSL-PFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT-------CBTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc-------ccCCceEEEcchhcC-CCCCCCccEEE
Confidence 57789999999999999999986 458999999999999999874 236899999998764 23357899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ -...+++. +.+.|+|||++++..
T Consensus 122 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEW--TE----EPLRALNE-IKRVLKSDGYACIAI 153 (242)
T ss_dssp EESCTTS--SS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChHhh--cc----CHHHHHHH-HHHHhCCCeEEEEEE
Confidence 8755332 11 12378888 799999999998875
No 147
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.19 E-value=4.6e-11 Score=105.18 Aligned_cols=104 Identities=19% Similarity=0.193 Sum_probs=82.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++.+. . ..++++++.+|+.+. ...+++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~~~~d~~~~-~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIA-G----VDRKVQVVQADARAI-PLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTT-T----SCTTEEEEESCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh-c----cCCceEEEEcccccC-CCCCCCeeEEE
Confidence 56789999999999999999986 4689999999999999999872 1 247899999998653 22356899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-++ .+ -...+++. +.+.|+|||.+++..
T Consensus 110 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 110 VVHLWHL--VP----DWPKVLAE-AIRVLKPGGALLEGW 141 (263)
T ss_dssp EESCGGG--CT----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhh--cC----CHHHHHHH-HHHHCCCCcEEEEEe
Confidence 8754322 11 12478888 799999999998763
No 148
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=5.9e-11 Score=106.19 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=80.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++ +..+|+++|+++.+++.|++.+ ++++++.+|+..+ . ..++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~-~~~~fD~v 121 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-R-VDKPLDAV 121 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-C-CSSCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-C-cCCCcCEE
Confidence 35678999999999999999998 4579999999999999999864 5688999998763 2 24689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
++...-.+. + --..+++. +++.|+|||.+++...
T Consensus 122 ~~~~~l~~~--~----d~~~~l~~-~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHWV--K----EPEAAIAS-IHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred EEcchhhhC--c----CHHHHHHH-HHHhcCCCcEEEEEec
Confidence 987643221 1 12478888 7999999999988753
No 149
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.19 E-value=5.4e-11 Score=103.99 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=80.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++++...+ -.++++++.+|+.++. ..++||+|+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~D~v~ 149 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYG---IADKIEFICGDFLLLA--SFLKADVVF 149 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHG--GGCCCSEEE
T ss_pred cCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC---CCcCeEEEECChHHhc--ccCCCCEEE
Confidence 367899999999999999999863 799999999999999999876542 1258999999998876 346899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++++-.....+. ..+.. +++.|+|||++++.
T Consensus 150 ~~~~~~~~~~~~------~~~~~-~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDYAT------AETFD-IRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGGGG------SSSBC-TTTSCSSCHHHHHH
T ss_pred ECCCcCCcchhh------hHHHH-HHhhcCCcceeHHH
Confidence 997633211111 12234 68999999987654
No 150
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.18 E-value=3.2e-11 Score=99.62 Aligned_cols=97 Identities=18% Similarity=0.079 Sum_probs=78.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.|++. .++++++.+| +....++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---------FDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---------CTTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC----CCCCCCceEEEE
Confidence 567799999999999999999865 4999999999999999986 2689999999 333457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 81 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 81 FANSFHD--MD----DKQHVISE-VKRILKDDGRVIIID 112 (170)
T ss_dssp EESCSTT--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eccchhc--cc----CHHHHHHH-HHHhcCCCCEEEEEE
Confidence 8765332 11 12478888 799999999998874
No 151
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.18 E-value=3.2e-10 Score=108.27 Aligned_cols=117 Identities=19% Similarity=0.210 Sum_probs=87.1
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCce
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD 177 (297)
...++.+|||+|||+|+.+..+++..+..+|+++|+++..++.+++++...+ -+++++.+|+..+... ..++||
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFD 317 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCC
Confidence 3456789999999999999999987655799999999999999999886542 2478999998765432 246899
Q ss_pred EEEEcCCCCCC----CCCcc-------Cc-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 178 VIIGDLADPIE----GGPCY-------KL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 178 ~Ii~D~~~~~~----~~p~~-------~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+|++|++-... ..|.. .+ ...++++. +.+.|+|||.++..+++
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~-a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA-IWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHH-HGGGEEEEEEEEEEESC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECC
Confidence 99999862110 01100 00 11477888 79999999999987754
No 152
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.18 E-value=6e-10 Score=92.74 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=83.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. .++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~--~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN--QESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC--GGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc--cCCCCEEE
Confidence 456799999999999999999864 99999999999987 1578999999877543 37899999
Q ss_pred EcCCCCCCCCC---ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeE
Q 022451 181 GDLADPIEGGP---CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVP 247 (297)
Q Consensus 181 ~D~~~~~~~~p---~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~ 247 (297)
++++-.+...+ ....-..++++. +.+.| |||.+++.... ......+.+.+++. |..+..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-pgG~l~~~~~~------~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDR-FVDAV-TVGMLYLLVIE------ANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHH-HHHHC-CSSEEEEEEEG------GGCHHHHHHHHHHTTCEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHH-HHhhC-CCCEEEEEEec------CCCHHHHHHHHHHCCCcEEEE
Confidence 98763221110 000112357777 56777 99999886421 12335566666654 554433
No 153
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.18 E-value=5.2e-11 Score=108.52 Aligned_cols=106 Identities=12% Similarity=0.065 Sum_probs=83.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. ..+|++||+++.+++.|++++...+ -.++++++.+|+.+. ...+++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR---IDDHVRSRVCNMLDT-PFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhcC-CCCCCCEeEEE
Confidence 457899999999999999998864 4689999999999999999876543 135899999998653 22357899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. +--..+++. +.+.|+|||.+++..
T Consensus 191 ~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMY-------VDLHDLFSE-HSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGG-------SCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhh-------CCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 8644221 114578998 799999999998765
No 154
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.17 E-value=3.7e-11 Score=108.30 Aligned_cols=108 Identities=16% Similarity=0.138 Sum_probs=83.9
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+...+ -.++++++.+|+.+. ...+++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG---LADNITVKYGSFLEI-PCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT---CTTTEEEEECCTTSC-SSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEEcCcccC-CCCCCCEeEE
Confidence 3567899999999999999999864 3589999999999999999875432 136899999998663 2235789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ . -..+++. +++.|+|||.+++..
T Consensus 155 ~~~~~l~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLH--SP--D--KLKVFQE-CARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGG--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eecchhhh--cC--C--HHHHHHH-HHHHcCCCeEEEEEE
Confidence 98754221 11 1 2578898 899999999998774
No 155
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=3.1e-11 Score=111.90 Aligned_cols=108 Identities=20% Similarity=0.253 Sum_probs=84.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++..++ .+++++.+|+..+. .++||+|+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~~~~~~d~~~~~---~~~fD~Iv 266 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG-----VEGEVFASNVFSEV---KGRFDMII 266 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTC---CSCEEEEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-----CCCEEEEccccccc---cCCeeEEE
Confidence 34679999999999999999987666799999999999999999886542 34678999987653 56899999
Q ss_pred EcCCCCCCCCCc-cCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++++-+. +.. ..-....+++. +.++|+|||.+++..
T Consensus 267 ~~~~~~~--g~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 267 SNPPFHD--GMQTSLDAAQTLIRG-AVRHLNSGGELRIVA 303 (343)
T ss_dssp ECCCCCS--SSHHHHHHHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred ECCCccc--CccCCHHHHHHHHHH-HHHhCCCCcEEEEEE
Confidence 9976432 110 01113578898 899999999998765
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.17 E-value=6.5e-11 Score=108.47 Aligned_cols=103 Identities=18% Similarity=0.172 Sum_probs=81.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++...+ -++++++.+|+.+.+. ..++||+
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g----~~~v~~~~~d~~~~~~-~~~~fD~ 147 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG----IENVIFVCGDGYYGVP-EFSPYDV 147 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEECChhhccc-cCCCeEE
Confidence 35678999999999999999988644 3679999999999999999876442 2469999999987544 2467999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+++...+. +. +. +.+.|+|||++++...
T Consensus 148 Iv~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 148 IFVTVGVDE-------VP-----ET-WFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEECSBBSC-------CC-----HH-HHHHEEEEEEEEEEBC
T ss_pred EEEcCCHHH-------HH-----HH-HHHhcCCCcEEEEEEC
Confidence 999965322 11 34 6789999999999864
No 157
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.17 E-value=9.8e-12 Score=109.75 Aligned_cols=113 Identities=15% Similarity=0.128 Sum_probs=80.4
Q ss_pred CCCeEEEEccchhHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhhhhc---cCCCCCCC-------------------
Q 022451 102 NPKTIFIMGGGEGSTAREILRH--KTVEKVVMCDIDEEVVEFCKSYLVVN---KEAFSDPR------------------- 157 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~f~~~---~~~~~~~r------------------- 157 (297)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++... +. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL---TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH---HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc---cccchhhhhhhhhcccccchhh
Confidence 5679999999999999999876 45679999999999999999876432 10 011
Q ss_pred ------eE-------------EEEcchHHHHhc----cCCCceEEEEcCCCCCCCCCc---cCcccHHHHHHHHcccCCC
Q 022451 158 ------LE-------------LVINDARAELES----RKESYDVIIGDLADPIEGGPC---YKLYTKSFYEFVVKPRLNP 211 (297)
Q Consensus 158 ------v~-------------~~~~Da~~~l~~----~~~~yD~Ii~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L~p 211 (297)
++ ++.+|+.+.+.. ...+||+|+++++-....... ..-....+++. +.++|+|
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~-~~~~Lkp 206 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS-LASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH-HHHHSCT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH-HHHhcCC
Confidence 56 999998776531 334899999997521100000 00112468888 7999999
Q ss_pred CcEEEEe
Q 022451 212 EGIFVTQ 218 (297)
Q Consensus 212 gGvl~~~ 218 (297)
||++++.
T Consensus 207 gG~l~~~ 213 (250)
T 1o9g_A 207 HAVIAVT 213 (250)
T ss_dssp TCEEEEE
T ss_pred CcEEEEe
Confidence 9999983
No 158
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=6.8e-11 Score=103.86 Aligned_cols=120 Identities=9% Similarity=0.048 Sum_probs=92.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++ -.++++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g---l~~~I~~~~gD~l~~~~~-~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG---LTSKIDVRLANGLSAFEE-ADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECchhhcccc-ccccCEEE
Confidence 56689999999999999999998767899999999999999999987654 236899999999887642 23799988
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
+.- ....+ -.+++.. ..+.|+++|.|+++.. .. ...+.+.+.+.
T Consensus 96 iaG-------mGg~l-I~~IL~~-~~~~l~~~~~lIlqp~-----~~---~~~lr~~L~~~ 139 (230)
T 3lec_A 96 ICG-------MGGRL-IADILNN-DIDKLQHVKTLVLQPN-----NR---EDDLRKWLAAN 139 (230)
T ss_dssp EEE-------ECHHH-HHHHHHH-TGGGGTTCCEEEEEES-----SC---HHHHHHHHHHT
T ss_pred EeC-------CchHH-HHHHHHH-HHHHhCcCCEEEEECC-----CC---hHHHHHHHHHC
Confidence 741 11222 3478888 7899999999999842 12 34556666655
No 159
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.17 E-value=4.7e-11 Score=110.53 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=89.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||+|||+|.++.. ++ +..+|++||+|+.+++.|++++..++. .++++++.+|+.+++ ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l---~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL---EHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECChHHhc----CCCcEEE
Confidence 4678999999999999999 76 468999999999999999999876641 358999999999876 6899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhC
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (297)
+|++.. ..++++. +.+.|+|||++++....+. .....+.+++.+
T Consensus 264 ~dpP~~----------~~~~l~~-~~~~L~~gG~l~~~~~~~~-------~~~~~~~l~~~~ 307 (336)
T 2yx1_A 264 MNLPKF----------AHKFIDK-ALDIVEEGGVIHYYTIGKD-------FDKAIKLFEKKC 307 (336)
T ss_dssp ECCTTT----------GGGGHHH-HHHHEEEEEEEEEEEEESS-------SHHHHHHHHHHS
T ss_pred ECCcHh----------HHHHHHH-HHHHcCCCCEEEEEEeecC-------chHHHHHHHHhc
Confidence 997521 1267787 7899999999988754331 234445555554
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.17 E-value=6.5e-11 Score=110.10 Aligned_cols=108 Identities=17% Similarity=0.239 Sum_probs=82.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++....++ -.++++++.+|+.+. ....++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK---LDHVVTIIKGKVEEV-ELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC-CCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC---CCCcEEEEECcHHHc-cCCCCceEEEE
Confidence 46789999999999999999987 567999999995 9999999876543 235799999998775 22357899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++...... . ..-.-..+++. +.+.|+|||+++..
T Consensus 139 s~~~~~~l--~-~~~~~~~~l~~-~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCL--F-YESMLNTVLHA-RDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTB--T-BTCCHHHHHHH-HHHHEEEEEEEESC
T ss_pred Eccccccc--c-CchhHHHHHHH-HHHhCCCCCEEccc
Confidence 98642210 0 11123467787 78999999998743
No 161
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.17 E-value=1.3e-10 Score=105.79 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=82.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+...+ ..++++++.+|+.++ +++||+|+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v~ 160 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID---TNRSRQVLLQGWEDF----AEPVDRIV 160 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECChHHC----CCCcCEEE
Confidence 467899999999999999999864 3599999999999999999876432 136799999998654 37899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ .-.-..+++. +.+.|+|||.+++..
T Consensus 161 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEH--FG--HENYDDFFKR-CFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGG--TC--GGGHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeChHHh--cC--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 8754211 11 0123578898 799999999999875
No 162
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.17 E-value=3.7e-11 Score=108.70 Aligned_cols=110 Identities=16% Similarity=0.192 Sum_probs=81.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|.++..+++. ..+|++||+++.+++.|++.+...... ...+++++.+|+.++- ..++||+|+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~~~~--~~~~fD~v~ 155 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPAD-VRDRCTLVQGDMSAFA--LDKRFGTVV 155 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHH-HHTTEEEEECBTTBCC--CSCCEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccc-cccceEEEeCchhcCC--cCCCcCEEE
Confidence 45569999999999999999986 368999999999999999987642100 0157999999987742 257899998
Q ss_pred EcCC-CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+... ... .+ .-.-..+++. +++.|+|||.|++.+.
T Consensus 156 ~~~~~~~~--~~--~~~~~~~l~~-~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 156 ISSGSINE--LD--EADRRGLYAS-VREHLEPGGKFLLSLA 191 (299)
T ss_dssp ECHHHHTT--SC--HHHHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred ECCccccc--CC--HHHHHHHHHH-HHHHcCCCcEEEEEee
Confidence 6421 111 01 0012578888 7999999999998863
No 163
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.17 E-value=8.1e-11 Score=110.59 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=82.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||++ .+++.|++++..++ -.++++++.+|+.++.. .++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~--~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN---LDHIVEVIEGSVEDISL--PEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT---CTTTEEEEESCGGGCCC--SSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC---CCCeEEEEECchhhcCc--CCcceEEE
Confidence 56789999999999999999987 45699999999 99999999876543 23679999999877532 27899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++..... .. ..-.-..+++. +.+.|+|||+++..
T Consensus 135 ~~~~~~~--l~-~e~~~~~~l~~-~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYF--LL-RESMFDSVISA-RDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTT--BT-TTCTHHHHHHH-HHHHEEEEEEEESS
T ss_pred EcChhhc--cc-chHHHHHHHHH-HHhhCCCCeEEEEe
Confidence 9864222 00 01112457887 78999999999754
No 164
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.16 E-value=5.9e-11 Score=104.10 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=81.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+... ++++++.+|+... ....++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC-CCCCCCeEEEE
Confidence 467899999999999999988764 568999999999999999976432 6799999998763 23456899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ .-.-..+++. +.+.|+|||++++..
T Consensus 164 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIY--LT--DADFVKFFKH-CQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhh--CC--HHHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 8754211 11 0012478888 799999999998865
No 165
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.16 E-value=6e-11 Score=106.60 Aligned_cols=116 Identities=8% Similarity=0.070 Sum_probs=81.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~~yD~ 178 (297)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++...........+++.+..+|+...-. ...++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 467899999999999999999863 49999999999999999875321100012578899999877532 23578999
Q ss_pred EEEc--CCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGD--LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D--~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++. ...+........-.-..+++. +.++|+|||++++..
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKN-IASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 9985 222211000000113468888 799999999999874
No 166
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=2.8e-10 Score=95.07 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=89.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+++.+||+||||+|.++..+++. ..+++++|+++.+++.|++.+ ++++++.+|+.+. ....++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~~D~i 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVD-QISETDFDLI 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTS-CCCCCCEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccC-CCCCCceeEE
Confidence 357789999999999999999986 468999999999999999864 4588999998763 2234689999
Q ss_pred EEcCC-CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeE
Q 022451 180 IGDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVP 247 (297)
Q Consensus 180 i~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~ 247 (297)
++... ... .+. -....+++. +.+.|+|||.+++...... ......+.+.+.+. |..+..
T Consensus 112 ~~~~~~~~~--~~~--~~~~~~l~~-~~~~l~~~G~l~~~~~~~~----~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 112 VSAGNVMGF--LAE--DGREPALAN-IHRALGADGRAVIGFGAGR----GWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp EECCCCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEEETTS----SCCHHHHHHHHHHHTEEEEEE
T ss_pred EECCcHHhh--cCh--HHHHHHHHH-HHHHhCCCCEEEEEeCCCC----CcCHHHHHHHHHHcCCEEeee
Confidence 99732 111 000 012478888 7999999999988753221 11234555556554 554433
No 167
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=8.4e-11 Score=110.67 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=85.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC-------------CCCCCCeEEEEcchHHH
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE-------------AFSDPRLELVINDARAE 168 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~-------------~~~~~rv~~~~~Da~~~ 168 (297)
.+.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. .+ .+++++.+|+..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 67899999999999999999875567899999999999999999876510 11 2399999999998
Q ss_pred HhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 169 LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 169 l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+....++||+|++|++. . ..+|++. +.+.|++||++++.+
T Consensus 125 ~~~~~~~fD~I~lDP~~----~------~~~~l~~-a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAERHRYFHFIDLDPFG----S------PMEFLDT-ALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHSTTCEEEEEECCSS----C------CHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCCCC----C------HHHHHHH-HHHhcCCCCEEEEEe
Confidence 87655689999999752 1 1378888 789999999888763
No 168
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.2e-10 Score=99.98 Aligned_cols=103 Identities=19% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++.+||+||||+|.++..+++.. +..+|+++|+++.+++.|++++.... -++++++.+|+...+. ..++||+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~-~~~~fD~ 149 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGTLGYE-PLAPYDR 149 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcccCCC-CCCCeeE
Confidence 3567899999999999999998864 34799999999999999999876432 2569999999865443 2467999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+++...+. +. +. +.+.|+|||.+++...
T Consensus 150 v~~~~~~~~-------~~-----~~-~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 150 IYTTAAGPK-------IP-----EP-LIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEESSBBSS-------CC-----HH-HHHTEEEEEEEEEEES
T ss_pred EEECCchHH-------HH-----HH-HHHHcCCCcEEEEEEC
Confidence 999865322 11 24 6889999999998864
No 169
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=7.7e-11 Score=103.13 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=80.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc----CCCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~----~~~y 176 (297)
.++.+|||||||+|..+..+++..+ +|++||+|+.+++.|++.+. ..+++++.+|+.+.-... ...|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4568999999999999999998753 89999999999999998762 358999999987643211 1349
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|++....+. .+. -....+++. +++.|+|||.+++..
T Consensus 126 d~v~~~~~~~~--~~~--~~~~~~l~~-~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHH--IPV--EKRELLGQS-LRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTT--SCG--GGHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhc--CCH--HHHHHHHHH-HHHHcCCCCEEEEEe
Confidence 99999866433 111 112478898 799999999876653
No 170
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.15 E-value=6.7e-11 Score=100.39 Aligned_cols=100 Identities=17% Similarity=0.249 Sum_probs=78.6
Q ss_pred eEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCC
Q 022451 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (297)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~ 184 (297)
+|||||||+|..+..+++. ..+++++|+++.+++.|++.+.... .+++++.+|+.+. ....++||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKG-----VKITTVQSNLADF-DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHT-----CCEEEECCBTTTB-SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-----CceEEEEcChhhc-CCCcCCccEEEEEhh
Confidence 9999999999999999886 3599999999999999999876432 4799999998764 223468999998532
Q ss_pred CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 185 ~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.. + .-....+++. +.+.|+|||.+++..
T Consensus 104 -~~---~--~~~~~~~l~~-~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 -HL---P--SSLRQQLYPK-VYQGLKPGGVFILEG 131 (202)
T ss_dssp -CC---C--HHHHHHHHHH-HHTTCCSSEEEEEEE
T ss_pred -cC---C--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 11 1 0113468888 799999999998875
No 171
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=9.2e-11 Score=103.86 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=92.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++ -.++++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~I~v~~gD~l~~~~~-~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG---LTEQIDVRKGNGLAVIEK-KDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEecchhhccCc-cccccEEE
Confidence 56689999999999999999998667799999999999999999987654 136899999999887642 23699988
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CC
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FK 243 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~ 243 (297)
+. +....+ -.+++.. ..+.|+++|.|+++.. .. ...+.+.|.+. |.
T Consensus 96 ia-------gmGg~l-I~~IL~~-~~~~L~~~~~lIlq~~-----~~---~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 96 IA-------GMGGTL-IRTILEE-GAAKLAGVTKLILQPN-----IA---AWQLREWSEQNNWL 142 (244)
T ss_dssp EE-------EECHHH-HHHHHHH-TGGGGTTCCEEEEEES-----SC---HHHHHHHHHHHTEE
T ss_pred Ee-------CCchHH-HHHHHHH-HHHHhCCCCEEEEEcC-----CC---hHHHHHHHHHCCCE
Confidence 73 111122 3478888 7899999999999842 12 34555666655 44
No 172
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.15 E-value=1.9e-11 Score=106.92 Aligned_cols=111 Identities=13% Similarity=-0.026 Sum_probs=78.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECC-HHHHHHH---HhhhhhccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDID-EEVVEFC---KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
.++.+|||||||+|.++..+++..+..+|++||++ +.|++.| ++..... .-++++++.+|+..+-......+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhccCeE
Confidence 46779999999999999999876667899999999 7777776 7665432 23679999999877522123567
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
|.|.+..+.+.. .........++++. ++++|+|||.+++
T Consensus 99 ~~i~~~~~~~~~-~~~~~~~~~~~l~~-~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTL-LEYVIKPNRDILSN-VADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHH-HHHHHTTCHHHHHH-HHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHH-hhhhhcchHHHHHH-HHHhcCCCcEEEE
Confidence 777776542210 00001112468899 8999999999988
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.15 E-value=6.5e-11 Score=102.83 Aligned_cols=107 Identities=21% Similarity=0.257 Sum_probs=80.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC------CcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHhccC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT------VEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRK 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~------~~~v~~VEid~~vi~~a~~~f~~~~~-~~~~~rv~~~~~Da~~~l~~~~ 173 (297)
.+..+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++..... .+..++++++.+|+.+.+.. .
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-N 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-G
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-C
Confidence 4567999999999999998887533 25899999999999999998753210 00025799999999874432 3
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
++||+|+++...+. +. +. +.+.|+|||++++....
T Consensus 162 ~~fD~I~~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 162 APYNAIHVGAAAPD-------TP-----TE-LINQLASGGRLIVPVGP 196 (227)
T ss_dssp CSEEEEEECSCBSS-------CC-----HH-HHHTEEEEEEEEEEESC
T ss_pred CCccEEEECCchHH-------HH-----HH-HHHHhcCCCEEEEEEec
Confidence 67999999865321 21 45 68899999999998754
No 174
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.15 E-value=8.8e-11 Score=102.10 Aligned_cols=106 Identities=13% Similarity=0.154 Sum_probs=81.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+||+||||+|.++..+++. ..+++++|+++.+++.|++.+.... .+++++.+|+.++. ..++||+|+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~--~~~~fD~v~ 106 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQG-----LKPRLACQDISNLN--INRKFDLIT 106 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTT-----CCCEEECCCGGGCC--CSCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcC-----CCeEEEecccccCC--ccCCceEEE
Confidence 46789999999999999999986 3689999999999999999876432 37999999987642 227899999
Q ss_pred EcC-CCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~-~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.. .-+. .+ ..-.-..+++. +++.|+|||++++..
T Consensus 107 ~~~~~l~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 107 CCLDSTNY--II-DSDDLKKYFKA-VSNHLKEGGVFIFDI 142 (246)
T ss_dssp ECTTGGGG--CC-SHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EcCccccc--cC-CHHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 864 3211 11 00112468888 799999999999864
No 175
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.15 E-value=1.9e-09 Score=91.81 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=85.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+ -+++++.+|+.++ +.+||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~----~~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-----GKFKVFIGDVSEF----NSRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-----TSEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCEEEEECchHHc----CCCCCEEE
Confidence 45789999999999999999886 34689999999999999999876542 2799999998774 35899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (297)
+|++-... ..-....+++. +.+.| ||++++... .......+.+.+.+.
T Consensus 118 ~~~p~~~~----~~~~~~~~l~~-~~~~l--~~~~~~~~~------~~~~~~~~~~~l~~~ 165 (207)
T 1wy7_A 118 MNPPFGSQ----RKHADRPFLLK-AFEIS--DVVYSIHLA------KPEVRRFIEKFSWEH 165 (207)
T ss_dssp ECCCCSSS----STTTTHHHHHH-HHHHC--SEEEEEEEC------CHHHHHHHHHHHHHT
T ss_pred EcCCCccc----cCCchHHHHHH-HHHhc--CcEEEEEeC------CcCCHHHHHHHHHHC
Confidence 99873321 11224578888 67777 676665421 223344455555544
No 176
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.15 E-value=1.4e-10 Score=100.09 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=83.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~-~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
+++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++.+..... .....+++++.+|+... ....++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCceeEE
Confidence 56789999999999999999986 46899999999999999998754321 11124789999998653 2335789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ ..-....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~l~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTS--VP-DPKERSRIIKE-VFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGG--CC-CHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcchhhc--CC-CHHHHHHHHHH-HHHHcCCCeEEEEEE
Confidence 98754221 11 00111268888 799999999998864
No 177
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.14 E-value=1.5e-10 Score=100.28 Aligned_cols=106 Identities=13% Similarity=0.131 Sum_probs=80.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHh---c
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELE---S 171 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~f~~~~~-~~~~~rv~~~~~Da~~~l~---~ 171 (297)
.++.+||+||||+|.++..+++.. +..+|+++|+++.+++.|++++..... .+..++++++.+|+.+... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 457899999999999999998864 346999999999999999998764310 0013689999999987431 1
Q ss_pred cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..++||+|+++...+ .+ ++. +.+.|+|||++++..
T Consensus 159 ~~~~fD~I~~~~~~~-------~~-----~~~-~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS-------EL-----PEI-LVDLLAENGKLIIPI 193 (227)
T ss_dssp HHCCEEEEEECSBBS-------SC-----CHH-HHHHEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH-------HH-----HHH-HHHhcCCCcEEEEEE
Confidence 246799999986532 22 245 678999999999875
No 178
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.14 E-value=4.7e-11 Score=107.07 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=83.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|..+..+++. +..+++++|+++.+++.|++.+.... ...+++++.+|+.+.-....++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK---RRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC---CSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC---CCccEEEEECCccccccCCCCCcCEE
Confidence 357789999999999999888876 45699999999999999999876432 12579999999876421135689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-+..-.. .-....+++. +.+.|+|||.+++..
T Consensus 138 ~~~~~l~~~~~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 138 SSQFSFHYAFST--SESLDIAQRN-IARHLRPGGYFIMTV 174 (298)
T ss_dssp EEESCGGGGGSS--HHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EECchhhhhcCC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 987542110000 0112468888 799999999999875
No 179
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.14 E-value=7.6e-11 Score=102.56 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
++..+||+||||+|.++..+++. .+++++|+++.+++.|++.+... ..+++++.+|+.+.- ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 101 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--LPEPVDAIT 101 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--CSSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--CCCCcCEEE
Confidence 45689999999999999998875 68999999999999999987643 257999999987642 237899999
Q ss_pred EcC-CCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~-~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.. .-.. .+ ..-....+++. +.++|+|||++++.+
T Consensus 102 ~~~~~~~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 102 ILCDSLNY--LQ-TEADVKQTFDS-AARLLTDGGKLLFDV 137 (243)
T ss_dssp ECTTGGGG--CC-SHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCchhh--cC-CHHHHHHHHHH-HHHhcCCCeEEEEEc
Confidence 864 1111 00 00112467888 799999999999865
No 180
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.14 E-value=8.1e-11 Score=111.17 Aligned_cols=104 Identities=23% Similarity=0.196 Sum_probs=86.0
Q ss_pred CCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCC-eEEEEcchHHHHh-ccCCCceE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPR-LELVINDARAELE-SRKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~r-v~~~~~Da~~~l~-~~~~~yD~ 178 (297)
++.+|||++||+|.++.++++.. +..+|++||+|+..++.+++++..++. +++ ++++.+|+++++. ...++||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl---~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI---PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC---CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC---CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 46799999999999999988853 347999999999999999999987641 245 9999999999997 65678999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++|++. .+ .+|++. +.+.|++||++.+..
T Consensus 129 V~lDP~g----~~------~~~l~~-a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPFG----TP------VPFIES-VALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCSS----CC------HHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEECCCc----CH------HHHHHH-HHHHhCCCCEEEEEe
Confidence 9999842 11 368888 788999999988764
No 181
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=1.6e-10 Score=107.11 Aligned_cols=106 Identities=18% Similarity=0.157 Sum_probs=80.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+..++ -.++++++.+|+.++ ....++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK---LEDTITLIKGKIEEV-HLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC---CCCcEEEEEeeHHHh-cCCCCcEEEEE
Confidence 56789999999999999999986 456999999997 9999999876543 136899999998764 22347899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
++..... .. ..-.-..+++. +.+.|+|||+++
T Consensus 137 s~~~~~~--l~-~~~~~~~~l~~-~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYF--LL-FESMLDSVLYA-KNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTT--BT-TTCHHHHHHHH-HHHHEEEEEEEE
T ss_pred EcCchhh--cc-CHHHHHHHHHH-HHhhcCCCcEEE
Confidence 9863111 00 01112357787 789999999987
No 182
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=109.34 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=79.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
+++.|||||||+|.++..+++. +..+|++||.++ +++.|++....++ -..+++++.+|..+. ..++++|+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~---~~~~i~~i~~~~~~~--~lpe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNG---LEDRVHVLPGPVETV--ELPEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcC---CCceEEEEeeeeeee--cCCccccEEEe
Confidence 5789999999999999988886 578999999997 7899998877654 247899999998764 23578999999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
...... .....+ -..++.. ..+.|+|||+++-
T Consensus 156 E~~~~~--l~~e~~-l~~~l~a-~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYG--LLHESM-LSSVLHA-RTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTT--BTTTCS-HHHHHHH-HHHHEEEEEEEES
T ss_pred eccccc--ccccch-hhhHHHH-HHhhCCCCceECC
Confidence 776422 111112 2356666 5799999998863
No 183
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.14 E-value=3.3e-11 Score=106.43 Aligned_cols=80 Identities=10% Similarity=0.126 Sum_probs=63.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhc-c---CCCc
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELES-R---KESY 176 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~-~l~~-~---~~~y 176 (297)
++.+|||+|||+|.++..+++..+..+|++||+++.+++.|++++...+ -.++++++.+|+.+ ++.. . +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN---LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC---CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 5679999999999999888876445799999999999999999886542 13579999999765 2221 1 2589
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|+|+++++
T Consensus 142 D~i~~npp 149 (254)
T 2h00_A 142 DFCMCNPP 149 (254)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99999976
No 184
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.14 E-value=8.6e-11 Score=100.01 Aligned_cols=108 Identities=18% Similarity=0.107 Sum_probs=78.9
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+++.+|||+|||+|..+..++... ..+|+++|+++.+++.|++++... .++++++.+|+.+. ...+++||+|
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~fD~v 93 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIRKL-PFKDESMSFV 93 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTTSC-CSCTTCEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchhhC-CCCCCceeEE
Confidence 3567899999999998754444433 469999999999999999987643 25789999998763 2235789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ .-....+++. +.+.|+|||++++..
T Consensus 94 ~~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 94 YSYGTIFH--MR--KNDVKEAIDE-IKRVLKPGGLACINF 128 (209)
T ss_dssp EECSCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcChHHh--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 98643111 11 0113468888 799999999998875
No 185
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.13 E-value=7.7e-10 Score=93.93 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=73.2
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++..+++. +..+|++||+|+.+++.|++++. +++++.+|+.++ +++||+|
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~~~~D~v 114 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----SGKYDTW 114 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----CCCEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----CCCeeEE
Confidence 346789999999999999999886 45689999999999999998753 689999998773 2689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
+++++-... . .-....+++. +.+.| |+++++
T Consensus 115 ~~~~p~~~~--~--~~~~~~~l~~-~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSV--V--KHSDRAFIDK-AFETS--MWIYSI 145 (200)
T ss_dssp EECCCC-----------CHHHHHH-HHHHE--EEEEEE
T ss_pred EECCCchhc--c--CchhHHHHHH-HHHhc--CcEEEE
Confidence 999874321 1 1123578888 67777 554443
No 186
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.13 E-value=2.9e-10 Score=109.30 Aligned_cols=118 Identities=15% Similarity=0.169 Sum_probs=87.1
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCc
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESY 176 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~y 176 (297)
...++.+|||+|||+|+.+..+++..+. .+|+++|+++.+++.+++++...+ -++++++.+|+..+.... +++|
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSSCSSCE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhhccCCC
Confidence 3456689999999999999999986544 799999999999999999876442 257999999987753222 2679
Q ss_pred eEEEEcCCCCCC----CCCc-------cCc-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 177 DVIIGDLADPIE----GGPC-------YKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 177 D~Ii~D~~~~~~----~~p~-------~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
|+|++|++-... ..|. ..+ ...++++. +.+.|+|||.++..+++
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLES-AARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCC
Confidence 999999863110 0110 000 01568888 79999999999987654
No 187
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.12 E-value=9.8e-11 Score=102.78 Aligned_cols=106 Identities=17% Similarity=0.244 Sum_probs=80.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+||+||||+|..+..+++. ..+|+++|+++.+++.|++.+... ..+++++.+|+.+.. ..++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--FKNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--CCSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--cCCCccEEE
Confidence 45689999999999999999986 358999999999999999987643 247999999987742 246799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+....... .+ .-.-..+++. +.++|+|||++++..
T Consensus 111 ~~~~~~~~-~~--~~~~~~~l~~-~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIMY-FD--EEDLRKLFSK-VAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGGG-SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCCchhc-CC--HHHHHHHHHH-HHHHcCCCeEEEEec
Confidence 75321100 00 0012468888 799999999998764
No 188
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=96.68 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=84.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCC---------cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE-EcchHHHHh
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTV---------EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELE 170 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~-~~Da~~~l~ 170 (297)
.++.+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|....-.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 56789999999999999999987543 799999999831 12568888 888654311
Q ss_pred -------ccCCCceEEEEcCCCCCCCCCccCccc--------HHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHH
Q 022451 171 -------SRKESYDVIIGDLADPIEGGPCYKLYT--------KSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (297)
Q Consensus 171 -------~~~~~yD~Ii~D~~~~~~~~p~~~L~t--------~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~ 235 (297)
..+++||+|+++...... +. ...+ ..+++. +.+.|+|||.+++.... ......+.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~------~~~~~~~~ 155 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNAT-GF--RDLDHDRLISLCLTLLSV-TPDILQPGGTFLCKTWA------GSQSRRLQ 155 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCC-SC--HHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECC------SGGGHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCC-CC--cccCHHHHHHHHHHHHHH-HHHHhcCCCEEEEEecC------CccHHHHH
Confidence 123579999998642211 10 1111 367888 79999999999987522 12345666
Q ss_pred HHHHhhCCceeEE
Q 022451 236 NTLRQVFKYVVPY 248 (297)
Q Consensus 236 ~~l~~~F~~v~~~ 248 (297)
..+++.|..+..+
T Consensus 156 ~~l~~~f~~v~~~ 168 (196)
T 2nyu_A 156 RRLTEEFQNVRII 168 (196)
T ss_dssp HHHHHHEEEEEEE
T ss_pred HHHHHHhcceEEE
Confidence 7777778776544
No 189
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.12 E-value=2.1e-10 Score=99.44 Aligned_cols=102 Identities=13% Similarity=0.201 Sum_probs=77.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+||+||||+|..+..+++.. .+++++|+++.+++.|++.+ ++++++.+|+.+.- ..++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--LGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--cCCCCcEEE
Confidence 567899999999999999999864 38999999999999999863 46899999987642 256899999
Q ss_pred EcCC-CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+... -+. .+ ..-....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~~~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGY--LK-TTEELGAAVAS-FAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGG--CC-SHHHHHHHHHH-HHHTEEEEEEEEECC
T ss_pred EcCchHhh--cC-CHHHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 5321 111 10 00112468888 799999999999874
No 190
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.12 E-value=2.5e-10 Score=99.01 Aligned_cols=99 Identities=21% Similarity=0.340 Sum_probs=78.7
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+||+||||+|.++..+++.. .+|+++|+++.+++.|++++... .+++++.+|+.+.+. ..++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~-~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE-EEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc-cCCCccEE
Confidence 3567899999999999999999864 79999999999999999987533 279999999877333 34689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+++..-+ .+. +. +.+.|+|||++++...
T Consensus 139 ~~~~~~~-------~~~-----~~-~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 139 VVWATAP-------TLL-----CK-PYEQLKEGGIMILPIG 166 (231)
T ss_dssp EESSBBS-------SCC-----HH-HHHTEEEEEEEEEEEC
T ss_pred EECCcHH-------HHH-----HH-HHHHcCCCcEEEEEEc
Confidence 9986432 121 24 6789999999998764
No 191
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=1.6e-10 Score=98.65 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=77.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|..+..+ +..+++++|+++.+++.|++.+ ++++++.+|+.+. ...+++||+|+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 100 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL-PFPGESFDVVL 100 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC-CCCCCcEEEEE
Confidence 47789999999999999876 2348999999999999999874 4688999997653 23356899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ ...++++. +.+.|+|||.+++..
T Consensus 101 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 101 LFTTLEF--VE----DVERVLLE-ARRVLRPGGALVVGV 132 (211)
T ss_dssp EESCTTT--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 8755332 11 12478888 799999999998875
No 192
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.12 E-value=3.8e-10 Score=97.61 Aligned_cols=106 Identities=23% Similarity=0.302 Sum_probs=79.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~-~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+. .+..++++++.+|+..... ...+||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 567899999999999999988763 446999999999999999998754210 0012579999999875432 2467999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+++...+ .+. +. +.+.|+|||++++...
T Consensus 155 i~~~~~~~-------~~~-----~~-~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAP-------VVP-----QA-LIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSBBS-------SCC-----HH-HHHTEEEEEEEEEEES
T ss_pred EEECCchH-------HHH-----HH-HHHhcCCCcEEEEEEe
Confidence 99986421 222 35 6889999999998864
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.12 E-value=3.5e-10 Score=105.11 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=80.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+..++ -.++++++.+|+.+.- ..++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~---l~~~v~~~~~d~~~~~--~~~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEVS--LPEQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTCC--CSSCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC---CCCcEEEEEcchhhCC--CCCceeEEE
Confidence 46789999999999999999986 467999999997 7899998876442 1368999999987641 236899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...... ..... ..+.+.. +++.|+|||++++.
T Consensus 122 s~~~~~~--~~~~~--~~~~l~~-~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYM--LFNER--MLESYLH-AKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTT--BTTTS--HHHHHHH-GGGGEEEEEEEESC
T ss_pred EeCchhc--CChHH--HHHHHHH-HHhhcCCCeEEEEe
Confidence 9865221 00011 2366777 78999999999854
No 194
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.12 E-value=1.3e-10 Score=99.96 Aligned_cols=110 Identities=14% Similarity=0.059 Sum_probs=76.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHH----hhhhhccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCK----SYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~----~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.+. +..... ..++++++.+|+.+ +....+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~-l~~~~~~- 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAER-LPPLSGV- 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTT-CCSCCCE-
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhh-CCCCCCC-
Confidence 5678999999999999999999877889999999999888532 222221 23589999999877 3333344
Q ss_pred eEEEEcCCCCCCCCCccC-cccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYK-LYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~-L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|.|++...... ..... --...+++. +++.|+|||.+++..
T Consensus 100 d~v~~~~~~~~--~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGS--LLRGVLGSSPEMLRG-MAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHH--HHHHHHTSSSHHHHH-HHHTEEEEEEEEEEE
T ss_pred CEEEEEccchh--hhhhhhccHHHHHHH-HHHHcCCCcEEEEEe
Confidence 87775442100 00000 001378888 899999999998864
No 195
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.11 E-value=4.8e-10 Score=108.62 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=87.1
Q ss_pred CCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+..+.....+.||+|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhccccCCEEE
Confidence 67899999999999999998864 34799999999999999999986542 24799999999886543456899999
Q ss_pred EcCCCC-C---CCCCcc-Ccc-----------cHHHHHHHHcccCCCCcEEEEecCC
Q 022451 181 GDLADP-I---EGGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 181 ~D~~~~-~---~~~p~~-~L~-----------t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+|++-. . ...|.. ..+ ..++++. +.+.|+|||+|+..+++
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDS-AFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHH-HHHhcCCCCEEEEeccc
Confidence 998621 1 001110 011 2467787 78999999999988764
No 196
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.11 E-value=8.4e-11 Score=100.18 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=75.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|.++..+....|..+++++|+|+.+++++++++...+. ..++++ .|..... ..++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~---~~~v~~--~d~~~~~--~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT---TIKYRF--LNKESDV--YKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC---SSEEEE--ECCHHHH--TTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CccEEE--ecccccC--CCCCcChhh
Confidence 678999999999999999998877778999999999999999999875431 114554 6765542 457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.-..-|.-..... ..+ . +.+.|+|||+++-.
T Consensus 121 a~k~LHlL~~~~~-----al~-~-v~~~L~pggvfISf 151 (200)
T 3fzg_A 121 LLKMLPVLKQQDV-----NIL-D-FLQLFHTQNFVISF 151 (200)
T ss_dssp EETCHHHHHHTTC-----CHH-H-HHHTCEEEEEEEEE
T ss_pred HhhHHHhhhhhHH-----HHH-H-HHHHhCCCCEEEEe
Confidence 8754221000001 133 4 57899999999754
No 197
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.11 E-value=6.4e-11 Score=107.88 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=82.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC---CCCCCCeEEEEcchHHHH-----hcc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE---AFSDPRLELVINDARAEL-----ESR 172 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~---~~~~~rv~~~~~Da~~~l-----~~~ 172 (297)
+++.+|||||||+|..+..+++. +..+++++|+++.+++.|++.+..... .....+++++.+|+.... ...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 46789999999999999998875 467999999999999999998753210 001247999999987652 112
Q ss_pred CCCceEEEEcCCCCCCCCCccCc-ccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 KESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.++||+|++...-++ .. ... .-..+++. +.++|+|||++++.+
T Consensus 112 ~~~fD~V~~~~~l~~--~~-~~~~~~~~~l~~-~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHY--SF-ESYEQADMMLRN-ACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGG--GG-GSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhh--cc-CCHHHHHHHHHH-HHHHhCCCcEEEEec
Confidence 358999999764332 10 011 12478898 799999999999875
No 198
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.10 E-value=1.7e-10 Score=105.32 Aligned_cols=114 Identities=9% Similarity=0.105 Sum_probs=76.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC--CCCeEEEEcch----H-HHHhc--
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS--DPRLELVINDA----R-AELES-- 171 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~--~~rv~~~~~Da----~-~~l~~-- 171 (297)
+.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|+++......... ..+++++++|. . .-+..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 34689999999999866555553 357899999999999999998653210000 01366777776 1 12221
Q ss_pred cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..++||+|++...-+..-.+ .+. ..+++. +.++|+|||++++.+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~-~~~--~~~l~~-~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHP-RHY--ATVMNN-LSELTASGGKVLITT 169 (302)
T ss_dssp CSSCEEEEEEESCGGGTCST-TTH--HHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCH-HHH--HHHHHH-HHHHcCCCCEEEEEe
Confidence 34689999876432210011 122 578999 799999999998875
No 199
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.10 E-value=2.6e-10 Score=99.62 Aligned_cols=103 Identities=24% Similarity=0.289 Sum_probs=79.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+||+||||+|.++..+++..+ .+|+++|+++.+++.|++++...+ -++++++.+|+..-+.. ..+||+|
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~fD~I 162 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDGSKGFPP-KAPYDVI 162 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCcccCCCC-CCCccEE
Confidence 35677999999999999999998755 789999999999999999876442 24699999998333322 3469999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+++...+. +. +. +.+.|+|||++++.+..
T Consensus 163 i~~~~~~~-------~~-----~~-~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPK-------IP-----EP-LIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSS-------CC-----HH-HHHTEEEEEEEEEEECS
T ss_pred EECCcHHH-------HH-----HH-HHHhcCCCcEEEEEEec
Confidence 99864321 21 24 67899999999988753
No 200
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.09 E-value=4.3e-10 Score=103.62 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=80.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||++ .+++.|++.+..++ -.++++++.+|+.+. ....++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG---FSDKITLLRGKLEDV-HLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC---CCCCEEEEECchhhc-cCCCCcccEEE
Confidence 35689999999999999999986 46799999999 58999999876543 136899999998764 22346899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
++..... .. ..-.-..++.. +++.|+|||+++.
T Consensus 111 s~~~~~~--l~-~~~~~~~~l~~-~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYF--LL-YESMMDTVLYA-RDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTT--BS-TTCCHHHHHHH-HHHHEEEEEEEES
T ss_pred EeCchhh--cc-cHHHHHHHHHH-HHhhcCCCeEEEE
Confidence 9865221 00 01112367777 7899999999973
No 201
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.09 E-value=4.6e-10 Score=100.94 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCCeEEEEccch---hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--H-------
Q 022451 102 NPKTIFIMGGGE---GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--L------- 169 (297)
Q Consensus 102 ~~~~VL~iG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~--l------- 169 (297)
...+|||||||+ |.++..+.+..+..+|++||+||.|++.|++.+.. .++++++.+|+++. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 458999999999 98877776666678999999999999999998732 36899999998653 1
Q ss_pred hc-cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 170 ES-RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 170 ~~-~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
.. ...+||+|++...-++ .+. . --..+++. +.++|+|||.|++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~--~~d-~-~~~~~l~~-~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHY--LSP-D-VVDRVVGA-YRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGG--SCT-T-THHHHHHH-HHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhh--CCc-H-HHHHHHHH-HHHhCCCCcEEEEEEe
Confidence 11 1247999998765332 111 1 13478898 7999999999998764
No 202
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.08 E-value=2.1e-10 Score=103.55 Aligned_cols=108 Identities=11% Similarity=0.070 Sum_probs=74.2
Q ss_pred CCCeEEEEccchhHHHHHH----HhcCCCcEE--EEEECCHHHHHHHHhhhhhccCCCCCCCe--EEEEcchHHHHh---
Q 022451 102 NPKTIFIMGGGEGSTAREI----LRHKTVEKV--VMCDIDEEVVEFCKSYLVVNKEAFSDPRL--ELVINDARAELE--- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l----~~~~~~~~v--~~VEid~~vi~~a~~~f~~~~~~~~~~rv--~~~~~Da~~~l~--- 170 (297)
++.+|||||||+|.++..+ +...+..+| ++||+++.|++.|++.+.... .-+++ .+..+|+..+..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS---NLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS---SCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc---CCCcceEEEEecchhhhhhhhc
Confidence 4579999999999765433 332344544 999999999999999864321 11344 456677765542
Q ss_pred --ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 171 --SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+++||+|++...-++...+ ..+++. ++++|+|||.+++..
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~------~~~l~~-~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDI------PATLKF-FHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCH------HHHHHH-HHHTEEEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeeeecCCH------HHHHHH-HHHHcCCCcEEEEEE
Confidence 135789999988653331112 368888 899999999998764
No 203
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.07 E-value=2.9e-10 Score=108.61 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=79.1
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHH-------HhhhhhccCCCCCCCeEEEEcchHH---HH
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFC-------KSYLVVNKEAFSDPRLELVINDARA---EL 169 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------~~~f~~~~~~~~~~rv~~~~~Da~~---~l 169 (297)
..++.+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+ +.-.+++++.+|+.. .+
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~~~~~~~ 317 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSFVDNNRV 317 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCSTTCHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCcccccccc
Confidence 3567899999999999999999865567899999999999999 76654332 112689999987542 12
Q ss_pred hccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 170 ESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 170 ~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
....++||+|+++.+- . .+ . -...++. +.+.|+|||.+++.
T Consensus 318 ~~~~~~FDvIvvn~~l-~--~~--d--~~~~L~e-l~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 AELIPQCDVILVNNFL-F--DE--D--LNKKVEK-ILQTAKVGCKIISL 358 (433)
T ss_dssp HHHGGGCSEEEECCTT-C--CH--H--HHHHHHH-HHTTCCTTCEEEES
T ss_pred ccccCCCCEEEEeCcc-c--cc--c--HHHHHHH-HHHhCCCCeEEEEe
Confidence 2223679999986432 1 11 1 1246677 78999999999876
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=1.5e-10 Score=102.72 Aligned_cols=99 Identities=17% Similarity=0.130 Sum_probs=76.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++ +..+|+++|+++.+++.|++. ++++++.+|+.+ +...+++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~-~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAEN-LALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTS-CCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhh-CCCCCCCEeEE
Confidence 35788999999999999999997 357999999999999887753 379999999865 33345789999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-..... -..+++. +.++|+ ||.+++..
T Consensus 99 ~~~~~l~~~~~------~~~~l~~-~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFSH------LEKSFQE-MQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCSS------HHHHHHH-HHHHBC-SSCEEEEE
T ss_pred EEcchHhhccC------HHHHHHH-HHHHhC-CcEEEEEE
Confidence 99865322111 2478888 799999 99665554
No 205
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.05 E-value=3.1e-10 Score=97.41 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=76.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-HhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-l~~~~~~yD~I 179 (297)
.++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+ .+++.+|+.++ +...+++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-----------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-----------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-----------CcEEEcchhhcCCCCCCCccCEE
Confidence 56789999999999999999987 4 79999999999999999753 26788887654 22234689999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-.. .+ -..++++. +++.|+|||.+++..
T Consensus 98 ~~~~~l~~--~~----~~~~~l~~-~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEH--LF----DPWAVIEK-VKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGG--SS----CHHHHHHH-TGGGEEEEEEEEEEE
T ss_pred EECChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 98644221 11 12478898 899999999998875
No 206
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.04 E-value=1.1e-09 Score=103.61 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=80.3
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-----ccCCCCCCCeEEEEcchHHHHhc-c
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-----NKEAFSDPRLELVINDARAELES-R 172 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~-----~~~~~~~~rv~~~~~Da~~~l~~-~ 172 (297)
...+..+|||||||+|.++..++...+..+|++||+++.++++|++.... ....+..++++++.+|+.+.--. .
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 34567899999999999999988766666799999999999999875321 00011236899999998664211 1
Q ss_pred CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
-..||+|+++.+- + .+ . -...+.. +.+.|+|||.|++..
T Consensus 250 ~~~aDVVf~Nn~~-F--~p--d--l~~aL~E-i~RvLKPGGrIVssE 288 (438)
T 3uwp_A 250 IANTSVIFVNNFA-F--GP--E--VDHQLKE-RFANMKEGGRIVSSK 288 (438)
T ss_dssp HHTCSEEEECCTT-C--CH--H--HHHHHHH-HHTTSCTTCEEEESS
T ss_pred cCCccEEEEcccc-c--Cc--h--HHHHHHH-HHHcCCCCcEEEEee
Confidence 1369999997542 1 11 1 1245666 689999999998763
No 207
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.04 E-value=4.2e-10 Score=104.96 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=82.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+++|||||||+|.++..+++..|..+++++|+ |.+++.|++++...+ ..+|++++.+|..+.-...++.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS---GSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT---TGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC---cccceEEEEccccccCCCCCCCcCEEE
Confidence 4678999999999999999998777789999999 999999999876432 136899999997653000136799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. -+. -....+++. +++.|+|||.+++..
T Consensus 254 ~~~vlh~--~~~--~~~~~~l~~-~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 254 MSQFLDC--FSE--EEVISILTR-VAQSIGKDSKVYIME 287 (363)
T ss_dssp EESCSTT--SCH--HHHHHHHHH-HHHHCCTTCEEEEEE
T ss_pred Eechhhh--CCH--HHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 8654221 110 012367888 799999999998754
No 208
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.02 E-value=6.1e-10 Score=98.62 Aligned_cols=99 Identities=17% Similarity=0.263 Sum_probs=76.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+++.+|||||||+|.++..+++. ..+++++|+++.+++.|++... . .++.+|+.+. ...+++||+|+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~--------~--~~~~~d~~~~-~~~~~~fD~v~ 119 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV--------K--NVVEAKAEDL-PFPSGAFEAVL 119 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC--------S--CEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC--------C--CEEECcHHHC-CCCCCCEEEEE
Confidence 47789999999999999999986 3689999999999999998742 1 2788887653 23357899999
Q ss_pred EcCC-CCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+... .+. .+ . -..+++. +.+.|+|||.+++..
T Consensus 120 ~~~~~~~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 120 ALGDVLSY--VE--N--KDKAFSE-IRRVLVPDGLLIATV 152 (260)
T ss_dssp ECSSHHHH--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhhc--cc--c--HHHHHHH-HHHHcCCCeEEEEEe
Confidence 8642 111 01 1 3578888 799999999999875
No 209
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.02 E-value=3.2e-10 Score=100.66 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=76.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++.. ++++++.+|+... ...+++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL-PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC-SBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC-CCCCCceeEEE
Confidence 4678999999999999999998755679999999999999999863 4688999997653 23356899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+... + .+++. +.+.|+|||.+++.+
T Consensus 154 ~~~~------~-------~~l~~-~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 154 RIYA------P-------CKAEE-LARVVKPGGWVITAT 178 (269)
T ss_dssp EESC------C-------CCHHH-HHHHEEEEEEEEEEE
T ss_pred EeCC------h-------hhHHH-HHHhcCCCcEEEEEE
Confidence 7532 1 23567 789999999998875
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.01 E-value=1.3e-09 Score=103.99 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=79.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||+|||+|.++..+++. ..+|++||+++.+++.|+++...++ -+ ++++.+|+.+++.. +||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ng----l~-v~~~~~d~~~~~~~---~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINN----VD-AEFEVASDREVSVK---GFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT----CC-EEEEECCTTTCCCT---TCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChHHcCcc---CCCEEE
Confidence 56789999999999999999885 4699999999999999999987653 23 99999999887532 799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++.. + ...++++. +. .|+|+|++.+.+
T Consensus 359 ~dPPr~---g-----~~~~~~~~-l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRA---G-----LHPRLVKR-LN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTT---C-----SCHHHHHH-HH-HHCCSEEEEEES
T ss_pred EcCCcc---c-----hHHHHHHH-HH-hcCCCcEEEEEC
Confidence 997631 1 13457776 44 699999999875
No 211
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.01 E-value=1.7e-09 Score=101.08 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=82.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++++...+ -.++++++.+|..+. .+..||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---l~~~v~~~~~d~~~~---~p~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG---LADRCEILPGDFFET---IPDGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTTC---CCSSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC---cCCceEEeccCCCCC---CCCCceEEE
Confidence 4678999999999999999998877889999999 999999999876432 137899999998632 223799999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 274 ~~~vlh~--~~--d~~~~~~L~~-~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 274 IKHVLHD--WD--DDDVVRILRR-IATAMKPDSRLLVID 307 (369)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEEE
T ss_pred hhhhhcc--CC--HHHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 8754221 11 1111258898 799999999998764
No 212
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.01 E-value=8.2e-10 Score=101.41 Aligned_cols=106 Identities=9% Similarity=0.039 Sum_probs=81.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++++...+ -.+|++++.+|..+. .+..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~p~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG---LSGRAQVVVGSFFDP---LPAGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTSC---CCCSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC---cCcCeEEecCCCCCC---CCCCCcEEEE
Confidence 468999999999999999998777789999999 999999999876432 137899999997632 2237999998
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 242 ~~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHD--WD--DLSAVAILRR-CAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred ehhhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 654221 11 0012468898 799999999998864
No 213
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.00 E-value=1.7e-09 Score=96.81 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=73.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~-~l~~~~~~yD~ 178 (297)
..++.+|||||||+|.++..+++. ..+|++||+|+.|++.|++++... .++....|... ......++||+
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~ 113 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDF 113 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccE
Confidence 456789999999999999999986 468999999999999999976421 23333333211 00122468999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+++..-.. -+... -..+++. +.++| |||++++...
T Consensus 114 Vv~~~~l~~--~~~~~--~~~~l~~-l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 114 VLNDRLINR--FTTEE--ARRACLG-MLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEEESCGGG--SCHHH--HHHHHHH-HHHHH-TTSEEEEEEE
T ss_pred EEEhhhhHh--CCHHH--HHHHHHH-HHHhC-cCcEEEEEec
Confidence 999854211 01001 2357787 78899 9999998863
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.99 E-value=1e-10 Score=103.00 Aligned_cols=115 Identities=11% Similarity=0.090 Sum_probs=79.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-------------------------C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------D 155 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~-------------------------~ 155 (297)
.++++||+||||+|.++..+++... .+|+++|+++.+++.|++.+......++ .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4567999999999999988887643 5899999999999999988653210000 0
Q ss_pred CCe-EEEEcchHHHHhccC---CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 156 PRL-ELVINDARAELESRK---ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 156 ~rv-~~~~~Da~~~l~~~~---~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.++ +++.+|+.+...... ++||+|++...-.. .+...-.-..+++. +.++|+|||.+++..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~--~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA--ACPDLPAYRTALRN-LGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH--HCSSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh--hcCChHHHHHHHHH-HHhhCCCCcEEEEEe
Confidence 127 899999876532223 68999998754210 00000012467888 799999999998764
No 215
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.99 E-value=3e-09 Score=99.71 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=77.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||+|||+|.++.+++...+..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+.. ...++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g---l~~~i~~~~~D~~~~~-~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG---VLDKIKFIQGDATQLS-QYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT---CGGGCEEEECCGGGGG-GTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhhCC-cccCCcCEE
Confidence 456789999999999999999987554589999999999999999986543 1257999999998753 334789999
Q ss_pred EEcCCCCCCCCCc---cCcccHHHHHHHHcccC
Q 022451 180 IGDLADPIEGGPC---YKLYTKSFYEFVVKPRL 209 (297)
Q Consensus 180 i~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L 209 (297)
++|++-....+.. ..+ ..++++. ++++|
T Consensus 291 i~npPyg~r~~~~~~~~~l-y~~~~~~-l~r~l 321 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDL-YMKFFNE-LAKVL 321 (373)
T ss_dssp EEECCCC------CCHHHH-HHHHHHH-HHHHE
T ss_pred EECCCCCcccCcchhHHHH-HHHHHHH-HHHHc
Confidence 9998732211110 122 2467788 78888
No 216
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.98 E-value=9.1e-10 Score=97.79 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=78.8
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHH------HHHHHHhhhhhccCCCCCCCeEEEEcc-hHHH-Hh
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEE------VVEFCKSYLVVNKEAFSDPRLELVIND-ARAE-LE 170 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~------vi~~a~~~f~~~~~~~~~~rv~~~~~D-a~~~-l~ 170 (297)
..++.+|||||||+|.++..+++.. +..+|+++|+++. +++.|++++.... ..++++++.+| .... +.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~ 117 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP---LGDRLTVHFNTNLSDDLGP 117 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST---TGGGEEEECSCCTTTCCGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC---CCCceEEEECChhhhccCC
Confidence 4567899999999999999999863 4579999999997 9999999876432 12689999998 2211 12
Q ss_pred ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...++||+|++...-.....+ ..+++. +++.++|||.+++..
T Consensus 118 ~~~~~fD~v~~~~~l~~~~~~------~~~~~~-~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 118 IADQHFDRVVLAHSLWYFASA------NALALL-FKNMAAVCDHVDVAE 159 (275)
T ss_dssp GTTCCCSEEEEESCGGGSSCH------HHHHHH-HHHHTTTCSEEEEEE
T ss_pred CCCCCEEEEEEccchhhCCCH------HHHHHH-HHHHhCCCCEEEEEE
Confidence 235789999987543221111 235565 677777799998864
No 217
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.98 E-value=6.4e-10 Score=102.77 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=82.5
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++++.... ..+|++++.+|..+.-....+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD---LGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC---CCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 78999999999999999998777789999999 899999999876432 13689999999866421134569999986
Q ss_pred CCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..-+. .+. -....+++. +++.|+|||.+++..
T Consensus 256 ~vlh~--~~~--~~~~~~l~~-~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHY--FDA--REAREVIGH-AAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGG--SCH--HHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ccccc--CCH--HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 54221 010 012478888 799999999998764
No 218
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.98 E-value=1.1e-09 Score=101.97 Aligned_cols=107 Identities=13% Similarity=0.117 Sum_probs=81.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ -.++++++.+|..+.+ ...||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG---LADRVTVAEGDFFKPL---PVTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SCCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCcC---CCCCCEEE
Confidence 4578999999999999999998777789999999 999999999876432 1358999999986533 23499999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 254 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 254 LSFVLLN--WS--DEDALTILRG-CVRALEPGGRLLVLD 287 (374)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 8754211 11 0011368898 799999999887654
No 219
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.98 E-value=2.8e-08 Score=92.97 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=76.3
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccC--------
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-------- 173 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~-------- 173 (297)
.+++|||+|||+|.++..+++. ..+|++||+++.+++.|+++...++ -++++++.+|+.+++....
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhccccccc
Confidence 3678999999999999988874 4699999999999999999987653 2589999999998875321
Q ss_pred -------CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 174 -------ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 174 -------~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
.+||+|++|++.. .+ ..+++ +.|+++|.++.-++.
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~-------g~-~~~~~-----~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRS-------GL-DSETE-----KMVQAYPRILYISCN 328 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTT-------CC-CHHHH-----HHHTTSSEEEEEESC
T ss_pred cccccccCCCCEEEECcCcc-------cc-HHHHH-----HHHhCCCEEEEEECC
Confidence 2799999997632 11 22333 344577877766543
No 220
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.97 E-value=8.3e-10 Score=106.99 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=79.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+...+ -.++++++.+|+.++ ...++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~g---l~~~v~~~~~d~~~~--~~~~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEV--SLPEQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcC---CCCcEEEEECchhhC--ccCCCeEEEE
Confidence 45789999999999999999885 567999999999 8899998876542 136899999998764 1236899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...... .. .. ..+.+.. +++.|+|||++++..
T Consensus 230 s~~~~~~~-~~-e~--~~~~l~~-~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYML-FN-ER--MLESYLH-AKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHH-TC-HH--HHHHHHH-GGGGEEEEEEEESCE
T ss_pred EeCchHhc-Cc-HH--HHHHHHH-HHHhcCCCCEEEEEe
Confidence 97541100 00 01 1356667 689999999998543
No 221
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.96 E-value=3.2e-09 Score=98.60 Aligned_cols=108 Identities=11% Similarity=0.109 Sum_probs=81.7
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..++.+|||||||+|.++..+++..|..+++++|+ |.+++.|++++...+ ..+|++++.+|+.+. .-..+|+|
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v 260 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG---VADRMRGIAVDIYKE---SYPEADAV 260 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CTTTEEEEECCTTTS---CCCCCSEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC---CCCCEEEEeCccccC---CCCCCCEE
Confidence 35678999999999999999998777789999999 999999999876432 135799999998654 22345999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 261 ~~~~vlh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYS--AN--EQLSTIMCKK-AFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEEE
T ss_pred EEechhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 98654211 11 1112468888 799999999996653
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.96 E-value=2.7e-10 Score=102.80 Aligned_cols=155 Identities=11% Similarity=-0.043 Sum_probs=96.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~--~~Da~~~l~~~~~~yD~ 178 (297)
.+..+|||||||+|.++..+++. .+|++||+++ ++..+++. +..... ...+++++ .+|++.+ .+++||+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 151 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVET-FGWNLITFKSKVDVTKM---EPFQADT 151 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCC-TTGGGEEEECSCCGGGC---CCCCCSE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhh-cCCCeEEEeccCcHhhC---CCCCcCE
Confidence 45779999999999999999986 5899999999 43333221 111000 11278999 8998763 2578999
Q ss_pred EEEcCCCCCCCCCc-cCcccHHHHHHHHcccCCCCc--EEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCcc
Q 022451 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPSF 255 (297)
Q Consensus 179 Ii~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG--vl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~~ 255 (297)
|++|.. .....+. ...-+..+++. +.+.|+||| .+++..-.| .......+++.+++.|..+..+ |.+
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~~v~~~~~~----~~~~~~~~l~~l~~~f~~v~v~----P~~ 221 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNV-ISRWLEYNQGCGFCVKVLNP----YSCDVLEALMKMQARFGGGLIR----VPL 221 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHSTTCEEEEEESCC----CSHHHHHHHHHHHHHHCCEEEC----CTT
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHH-HHHHhccCCCcEEEEEeCCC----CchhHHHHHHHHHHHcCCEEEE----cCC
Confidence 999976 2211110 00001136777 789999999 998865333 1122345667788888876543 443
Q ss_pred C---CceeEEEEecCCCCCCcc
Q 022451 256 A---DTWGWIMVSIYNPHSHSI 274 (297)
Q Consensus 256 ~---~~~~~~~as~~~~~~~~i 274 (297)
. ....|+++..+....+.+
T Consensus 222 sR~~s~E~y~v~~~~~~~~~~~ 243 (276)
T 2wa2_A 222 SRNSTHEMYFVSGIKNNIMGNV 243 (276)
T ss_dssp SCTTCCCEEEESSCCCCHHHHH
T ss_pred CCCcchheEEecccCCCcchhH
Confidence 2 234566666655443433
No 223
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.96 E-value=5.1e-10 Score=105.54 Aligned_cols=98 Identities=17% Similarity=0.305 Sum_probs=71.0
Q ss_pred CCCCeEEEEccc------h-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHh-
Q 022451 101 PNPKTIFIMGGG------E-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELE- 170 (297)
Q Consensus 101 ~~~~~VL~iG~G------~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~- 170 (297)
.++.+||+|||| + |.....+.++++..+|++||+++.+. . ..++++++++|+.+ ++.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcEEEEecccccchhhh
Confidence 568999999999 4 44444444455678999999999972 0 24789999999865 331
Q ss_pred --ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 171 --SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...++||+|++|....+ + . -..+|+. ++++|||||++++..
T Consensus 282 l~~~d~sFDlVisdgsH~~---~--d--~~~aL~e-l~rvLKPGGvlVi~D 324 (419)
T 3sso_A 282 IARRYGPFDIVIDDGSHIN---A--H--VRTSFAA-LFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHHCCEEEEEECSCCCH---H--H--HHHHHHH-HGGGEEEEEEEEEEC
T ss_pred hhcccCCccEEEECCcccc---h--h--HHHHHHH-HHHhcCCCeEEEEEe
Confidence 12478999999864211 1 1 2468888 799999999999863
No 224
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.96 E-value=2e-09 Score=97.75 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=81.2
Q ss_pred EEEEcCcc-ccccCChhhHHHHHHHHHHhcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc
Q 022451 71 ALVIDGKL-QSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN 149 (297)
Q Consensus 71 ~L~ldg~~-q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~ 149 (297)
.+.++|.. ....+..+-..+++..+ .....+++|||||||+|.++..+++. +..+|++||+++.|++.+.+.
T Consensus 55 ~I~v~g~~~~yvsrg~~Kl~~~l~~~--~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---- 127 (291)
T 3hp7_A 55 ELKLKGEKLRYVSRGGLKLEKALAVF--NLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---- 127 (291)
T ss_dssp CEEETTCCCCSSSTTHHHHHHHHHHT--TCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----
T ss_pred EEEEcccccccccchHHHHHHHHHhc--CCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----
Confidence 35566653 23334433333333322 12345789999999999999999886 567999999999999885442
Q ss_pred cCCCCCCCeEEEE-cchHHHHhc---cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 150 KEAFSDPRLELVI-NDARAELES---RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 150 ~~~~~~~rv~~~~-~Da~~~l~~---~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
++++.... .|++. +.. ....||+|++|..... + ...+.. +++.|+|||.+++-
T Consensus 128 -----~~rv~~~~~~ni~~-l~~~~l~~~~fD~v~~d~sf~s-------l--~~vL~e-~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 -----DDRVRSMEQYNFRY-AEPVDFTEGLPSFASIDVSFIS-------L--NLILPA-LAKILVDGGQVVAL 184 (291)
T ss_dssp -----CTTEEEECSCCGGG-CCGGGCTTCCCSEEEECCSSSC-------G--GGTHHH-HHHHSCTTCEEEEE
T ss_pred -----CcccceecccCcee-cchhhCCCCCCCEEEEEeeHhh-------H--HHHHHH-HHHHcCcCCEEEEE
Confidence 35654433 34332 221 1234999999975321 1 356777 79999999998775
No 225
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.94 E-value=9.4e-10 Score=100.71 Aligned_cols=108 Identities=14% Similarity=0.134 Sum_probs=81.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||+|||+|.++..+++..+..+++++|++ .+++.|++.+...+ -.++++++.+|..+. ...+.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~--~~~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG---VASRYHTIAGSAFEV--DYGNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT---CGGGEEEEESCTTTS--CCCSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC---CCcceEEEecccccC--CCCCCCcEEE
Confidence 56789999999999999999987677899999999 99999999876432 125799999997653 2234599999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-...++++. +++.|+|||.+++..
T Consensus 238 ~~~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 238 LPNFLHH--FD--VATCEQLLRK-IKTALAVEGKVIVFD 271 (335)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhcc--CC--HHHHHHHHHH-HHHhCCCCcEEEEEe
Confidence 8543111 01 0112478888 799999999777654
No 226
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.94 E-value=1.3e-08 Score=97.23 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=80.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD 177 (297)
..+.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++...++ -++++++.+|+.+++.. ..++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~----~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEECCHHHHhhhhhhhcCCCC
Confidence 45679999999999999999986 5799999999999999999986553 24899999999886532 346799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++|++-. .+ .++++. +. .++|++++.+.+
T Consensus 359 ~Vv~dPPr~-------g~--~~~~~~-l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARA-------GA--AGVMQQ-II-KLEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTT-------CC--HHHHHH-HH-HHCCSEEEEEES
T ss_pred EEEECCCCc-------cH--HHHHHH-HH-hcCCCeEEEEEC
Confidence 999997632 11 256666 43 588999888764
No 227
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.94 E-value=2.5e-09 Score=92.00 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=74.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--------------
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-------------- 167 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~-------------- 167 (297)
.+++||++|+| ..+..+++.. ..+|+.||.|++..+.|+++|...+.. ...+++++.+|+.+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~-~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPA-EGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCC-TTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCCceEEEEeCchhhhcccccccchhhh
Confidence 67899999984 6777777753 689999999999999999999754310 03689999999643
Q ss_pred ----HHh---c--cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 168 ----ELE---S--RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 168 ----~l~---~--~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+.. . ..++||+|++|..- ...++.. +.++|+|||++++-
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-----------~~~~~~~-~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-----------RVGCALA-TAFSITRPVTLLFD 153 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-----------HHHHHHH-HHHHCSSCEEEEET
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-----------chhHHHH-HHHhcCCCeEEEEe
Confidence 221 1 23689999999631 1255565 56899999999763
No 228
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.94 E-value=1.4e-08 Score=92.93 Aligned_cols=117 Identities=14% Similarity=0.036 Sum_probs=82.7
Q ss_pred cCCCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc--CCC
Q 022451 99 HHPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KES 175 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~--~~~ 175 (297)
...++.+|||+|||+|+.+..+++. .+..+|+++|+++..++.+++++...+ -.+++++.+|+.++.... ..+
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGGGTT
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccccCC
Confidence 3456789999999999999998875 345799999999999999999986542 257999999998764321 147
Q ss_pred ceEEEEcCCCCCC----CCCc---------cCc-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 176 YDVIIGDLADPIE----GGPC---------YKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 176 yD~Ii~D~~~~~~----~~p~---------~~L-----~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
||.|++|++-... ..|. ..+ ...++++. +.+.|+ ||.|+..+++
T Consensus 175 fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 175 VHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH-ALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEEEEECCCCCC------------------CCHHHHHHHHHHHHHH-HTTCTT-CCEEEEEESC
T ss_pred CCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHH-HHhccC-CCEEEEECCC
Confidence 9999999872110 0010 011 11346666 567776 9998877654
No 229
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.94 E-value=3.5e-09 Score=107.29 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhc--cCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVN--KEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~--~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
..+.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+... ......++++++.+|+.+. ....++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCee
Confidence 467899999999999999999875 4479999999999999999866421 1111236899999998764 23457899
Q ss_pred EEEEcCCCCCCCCCccCccc---HHHHHHHHcccCCCCcEEEEe
Q 022451 178 VIIGDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t---~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|++...-. ++.. ..+++. +.+.|+|| .+++.
T Consensus 799 lVV~~eVLe-------HL~dp~l~~~L~e-I~RvLKPG-~LIIS 833 (950)
T 3htx_A 799 IGTCLEVIE-------HMEEDQACEFGEK-VLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEEESCGG-------GSCHHHHHHHHHH-HHHTTCCS-EEEEE
T ss_pred EEEEeCchh-------hCChHHHHHHHHH-HHHHcCCC-EEEEE
Confidence 999964321 2222 247888 79999999 66554
No 230
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.94 E-value=1.1e-10 Score=104.03 Aligned_cols=114 Identities=15% Similarity=0.129 Sum_probs=75.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-------------------------C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------D 155 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~-------------------------~ 155 (297)
.++.+|||||||+|..+..++.. +..+|+++|+++.+++.|++++......++ .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 35678999999999877665554 346899999999999999987643211110 0
Q ss_pred CCeE-EEEcchHHHHh---ccCCCceEEEEcCCCCCCCCCccCc-ccHHHHHHHHcccCCCCcEEEEec
Q 022451 156 PRLE-LVINDARAELE---SRKESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 156 ~rv~-~~~~Da~~~l~---~~~~~yD~Ii~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+++ ++.+|..+... ...++||+|++...-+.. .+ .+ --...++. +.++|||||.|++..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i-~~--~~~~~~~~l~~-i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA-CC--SLDAYRAALCN-LASLLKPGGHLVTTV 197 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH-CS--SHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHh-cC--CHHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 1243 88888766321 124689999997542110 00 00 01357777 789999999998874
No 231
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.93 E-value=1.9e-09 Score=99.94 Aligned_cols=107 Identities=21% Similarity=0.268 Sum_probs=81.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ -.++++++.+|..+.+ ...||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG---LSDRVDVVEGDFFEPL---PRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCCC---CCCccEEE
Confidence 4578999999999999999998777779999999 999999999876432 1358999999986533 23599999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 255 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 255 LSFVLLN--WP--DHDAVRILTR-CAEALEPGGRILIHE 288 (360)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EcccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 8654211 11 0011368898 799999999888764
No 232
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.93 E-value=2.4e-09 Score=96.37 Aligned_cols=110 Identities=16% Similarity=0.161 Sum_probs=75.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEEC-CHHHHHHHHhhhhhccC---CCC---CCCeEEEEcc---h-HHHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI-DEEVVEFCKSYLVVNKE---AFS---DPRLELVIND---A-RAEL 169 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~a~~~f~~~~~---~~~---~~rv~~~~~D---a-~~~l 169 (297)
..+++|||||||+|.++..+++. +..+|+++|+ ++.+++.|+++...+.. .+. .++++++..| . ....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 45689999999999999988886 3469999999 99999999998732210 010 1478888444 2 2222
Q ss_pred hc-cCCCceEEEE-cCCCCCCCCCccCcccHHHHHHHHcccCC---C--CcEEEEec
Q 022451 170 ES-RKESYDVIIG-DLADPIEGGPCYKLYTKSFYEFVVKPRLN---P--EGIFVTQA 219 (297)
Q Consensus 170 ~~-~~~~yD~Ii~-D~~~~~~~~p~~~L~t~ef~~~~~~~~L~---p--gGvl~~~~ 219 (297)
.. ..++||+|++ |..... + .-..+++. +++.|+ | ||++++..
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~---~----~~~~ll~~-l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH---Q----AHDALLRS-VKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG---G----GHHHHHHH-HHHHBCCTTTCTTCEEEEEE
T ss_pred hhccCCCCCEEEEeCcccCh---H----HHHHHHHH-HHHHhcccCCCCCCEEEEEE
Confidence 11 3578999987 543211 1 13467888 799999 9 99776543
No 233
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.92 E-value=1.4e-09 Score=100.76 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=91.3
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCC-----cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTV-----EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~-----~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
.+.+|||+|||+|.++..+++..+. .+++++|+|+.++++|+.++...+ .+++++.+|+.... ...+|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~~~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----QKMTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEESCTTSCC--CCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----CCceEEECCCCCcc--ccCCc
Confidence 5679999999999999888875332 689999999999999999876543 25899999976532 34689
Q ss_pred eEEEEcCCCCCCC--------CC--ccC--cccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhC
Q 022451 177 DVIIGDLADPIEG--------GP--CYK--LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (297)
Q Consensus 177 D~Ii~D~~~~~~~--------~p--~~~--L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (297)
|+|+++++-.... .+ ... .+...|++. +.+.|+|||++++-+... +........+.+.+.+.+
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~~~Lk~gG~~~~v~p~~--~~~~~~~~~ir~~l~~~~ 277 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQ-GMRYTKPGGYLFFLVPDA--MFGTSDFAKVDKFIKKNG 277 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHH-HHHTEEEEEEEEEEEEGG--GGGSTTHHHHHHHHHHHE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHH-HHHHhCCCCEEEEEECch--hcCCchHHHHHHHHHhCC
Confidence 9999998721100 00 001 122368888 789999999988765221 233334466666666543
No 234
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.92 E-value=4.7e-10 Score=100.61 Aligned_cols=152 Identities=11% Similarity=-0.072 Sum_probs=93.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~--~~Da~~~l~~~~~~yD~ 178 (297)
.+..+|||||||+|.++..+++. .+|++||+++ ++..+++. +..... ...++.++ .+|++.+ .+++||+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 143 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL---PVERTDV 143 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS---CCCCCSE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC---CCCCCcE
Confidence 46789999999999999999886 5899999999 43222211 110000 11268889 8998763 2578999
Q ss_pred EEEcCCCCCCCCCc-cCcccHHHHHHHHcccCCCCc--EEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecCc-
Q 022451 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIPS- 254 (297)
Q Consensus 179 Ii~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG--vl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp~- 254 (297)
|++|.. .....+. ...-+..+++. +.+.|+||| .+++..-.| .......++..+++.|..+.... +.
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~fv~kv~~~----~~~~~~~~l~~l~~~f~~v~~~k---~~s 214 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILEL-LEKWKVKNPSADFVVKVLCP----YSVEVMERLSVMQRKWGGGLVRN---PYS 214 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHCTTCEEEEEESCT----TSHHHHHHHHHHHHHHCCEEECC---TTS
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHH-HHHHhccCCCeEEEEEeCCC----CChhHHHHHHHHHHHcCCEEEEE---ecc
Confidence 999976 2211110 00001136777 789999999 998875333 11223366677888888765432 32
Q ss_pred cC-CceeEEEEecCCCC
Q 022451 255 FA-DTWGWIMVSIYNPH 270 (297)
Q Consensus 255 ~~-~~~~~~~as~~~~~ 270 (297)
.. ..-.|++|..+...
T Consensus 215 R~~s~E~y~v~~~~~~~ 231 (265)
T 2oxt_A 215 RNSTHEMYFTSRAGGNI 231 (265)
T ss_dssp CTTCCCEEEESSCCSCH
T ss_pred cCCCccEEEEecCCCCc
Confidence 22 22356666655543
No 235
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.92 E-value=1.4e-09 Score=99.87 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=80.5
Q ss_pred CeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcC
Q 022451 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDL 183 (297)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~ 183 (297)
.+|||+|||+|..+..+++..|..+++++|+ |.+++.|++.+...+ -.++++++.+|..+. ..+.||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL---AGERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH---HTTSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC---CCCcEEEecCCCCCC---CCCCCCEEEEch
Confidence 8999999999999999998777789999999 999999999875322 136899999998662 236799999875
Q ss_pred CCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 184 ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 184 ~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.-+. -+ .-....+++. +++.|+|||.+++..
T Consensus 242 vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 242 IIGD--LD--EAASLRLLGN-CREAMAGDGRVVVIE 272 (334)
T ss_dssp CGGG--CC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred hccC--CC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 4221 01 0012378888 799999999988774
No 236
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=2e-09 Score=92.72 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=72.4
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+.+||+||||+|.++..+++. +++|+++.+++.|++. +++++.+|+... ....++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENL-PLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-CSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccC-CCCCCCeeEEEEc
Confidence 889999999999999987763 9999999999999974 578889997653 2334689999987
Q ss_pred CCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..-.. .+ . ...+++. +.+.|+|||.+++..
T Consensus 110 ~~l~~--~~--~--~~~~l~~-~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICF--VD--D--PERALKE-AYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGG--SS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred chHhh--cc--C--HHHHHHH-HHHHcCCCcEEEEEE
Confidence 54221 11 1 2478888 799999999998875
No 237
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.90 E-value=1.3e-08 Score=92.73 Aligned_cols=148 Identities=17% Similarity=0.195 Sum_probs=95.2
Q ss_pred CCCeEEEEccchhHHHHH----HHhcCCCcEEE--EEECCHH---------HHHHHHhhhhhccCCCCCCC--eEEEEcc
Q 022451 102 NPKTIFIMGGGEGSTARE----ILRHKTVEKVV--MCDIDEE---------VVEFCKSYLVVNKEAFSDPR--LELVIND 164 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~----l~~~~~~~~v~--~VEid~~---------vi~~a~~~f~~~~~~~~~~r--v~~~~~D 164 (297)
..-+||++|.|+|..... +.+..+..++. .+|-+|. ..++.+..+.... .+...+ ++++.+|
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p-~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP-EYEGERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS-EEECSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc-cccCCcEEEEEEech
Confidence 456899999999985432 22333445554 4554321 1222222221100 112344 4688999
Q ss_pred hHHHHhccC-CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCC
Q 022451 165 ARAELESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (297)
Q Consensus 165 a~~~l~~~~-~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~ 243 (297)
+++.+..-. .++|+|++|.|.|.. . ..|++.++|+. +.++++|||+|++.+.. ..+.+.|+++.=
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~k-N--PeLWs~e~f~~-l~~~~~pgg~laTYtaa----------g~VRR~L~~aGF 240 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYK-N--PELWTLDFLSL-IKERIDEKGYWVSYSSS----------LSVRKSLLTLGF 240 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTT-S--GGGGSHHHHHH-HHTTEEEEEEEEESCCC----------HHHHHHHHHTTC
T ss_pred HHHHHhhhcccceeEEEeCCCCccc-C--cccCCHHHHHH-HHHHhCCCcEEEEEeCc----------HHHHHHHHHCCC
Confidence 999998743 489999999998862 3 48999999999 89999999999987521 356677877744
Q ss_pred ceeEEEEecCccCCceeEEEEecCC
Q 022451 244 YVVPYSAHIPSFADTWGWIMVSIYN 268 (297)
Q Consensus 244 ~v~~~~~~vp~~~~~~~~~~as~~~ 268 (297)
.|. .+|.++.-...+.|+..+
T Consensus 241 ~V~----k~~G~g~KReml~A~~~~ 261 (308)
T 3vyw_A 241 KVG----SSREIGRKRKGTVASLKA 261 (308)
T ss_dssp EEE----EEECC---CEEEEEESSS
T ss_pred EEE----ecCCCCCCCceeEEecCC
Confidence 443 456676656778888654
No 238
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.89 E-value=2.1e-09 Score=98.20 Aligned_cols=126 Identities=11% Similarity=0.017 Sum_probs=84.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEEC----CHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhccCCC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI----DEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKES 175 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~a~~~f~~~~~~~~~~rv~~~~~-Da~~~l~~~~~~ 175 (297)
.+..+|||||||+|.++..+++. .+|++||+ ++..++.+ ... ....++++++.+ |+..+ ..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~~--~~~~~~v~~~~~~D~~~l---~~~~ 148 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PMS--TYGWNLVRLQSGVDVFFI---PPER 148 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CCC--STTGGGEEEECSCCTTTS---CCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hhh--hcCCCCeEEEeccccccC---CcCC
Confidence 45689999999999999999986 47999999 45332211 101 112367999999 87653 3468
Q ss_pred ceEEEEcCCCCCCCCCccCccc----HHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE
Q 022451 176 YDVIIGDLADPIEGGPCYKLYT----KSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP 247 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t----~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (297)
||+|++|..... +. .... ...++. +.+.|+|||.|++..-.+ .......++..+++.|..+..
T Consensus 149 fD~V~sd~~~~~--g~--~~~d~~~~l~~L~~-~~~~LkpGG~~v~kv~~~----~~~~~~~~l~~l~~~f~~v~~ 215 (305)
T 2p41_A 149 CDTLLCDIGESS--PN--PTVEAGRTLRVLNL-VENWLSNNTQFCVKVLNP----YMSSVIEKMEALQRKHGGALV 215 (305)
T ss_dssp CSEEEECCCCCC--SS--HHHHHHHHHHHHHH-HHHHCCTTCEEEEEESCC----CSHHHHHHHHHHHHHHCCEEE
T ss_pred CCEEEECCcccc--Cc--chhhHHHHHHHHHH-HHHHhCCCCEEEEEeCCC----CCchHHHHHHHHHHHcCCEEE
Confidence 999999975321 11 1111 146777 689999999999875322 123446677778888887653
No 239
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.89 E-value=1.2e-09 Score=103.28 Aligned_cols=124 Identities=21% Similarity=0.226 Sum_probs=86.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..+.+|||+|||+|.++..++++. +..+|++||+|+.+++.| ++++++.+|...+. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~--~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE--PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC--CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC--ccCCCCEE
Confidence 356799999999999999998753 457999999999998765 36899999987753 24689999
Q ss_pred EEcCCCCCCCC--------Ccc--Cc-------------ccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHH
Q 022451 180 IGDLADPIEGG--------PCY--KL-------------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (297)
Q Consensus 180 i~D~~~~~~~~--------p~~--~L-------------~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~ 236 (297)
+++++-..... +.. .. ....|++. +.+.|+|||.+++-... .+........+.+
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~~G~~~~i~p~--~~l~~~~~~~lr~ 179 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEK-AVRLLKPGGVLVFVVPA--TWLVLEDFALLRE 179 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHH-HHHHEEEEEEEEEEEEG--GGGTCGGGHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHH-HHHHhCCCCEEEEEECh--HHhcCccHHHHHH
Confidence 99986311101 000 00 11267888 78999999999876522 1333334456666
Q ss_pred HHHhhC
Q 022451 237 TLRQVF 242 (297)
Q Consensus 237 ~l~~~F 242 (297)
.+.+..
T Consensus 180 ~l~~~~ 185 (421)
T 2ih2_A 180 FLAREG 185 (421)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 666553
No 240
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.88 E-value=5.5e-10 Score=100.42 Aligned_cols=113 Identities=14% Similarity=0.106 Sum_probs=73.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC------------C-------------
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS------------D------------- 155 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~------------~------------- 155 (297)
.++.+|||||||+|.++..+... +..+|+++|+++.+++.|++++......+. .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999954433332 356999999999999999986542100000 0
Q ss_pred -CCeEEEEcchHHHHh-----ccCCCceEEEEcCCCCCCCCCccCc-ccHHHHHHHHcccCCCCcEEEEe
Q 022451 156 -PRLELVINDARAELE-----SRKESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 156 -~rv~~~~~Da~~~l~-----~~~~~yD~Ii~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
..++++..|+.+.+. ..+++||+|++...-.+ .+ ..+ --..+++. ++++|+|||.|++.
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~--~~-~~~~~~~~~l~~-~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA--VS-PDLASFQRALDH-ITTLLRPGGHLLLI 214 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH--HC-SSHHHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh--hc-CCHHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 125677778776332 12356999998754211 00 001 12468888 79999999999875
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=9.4e-09 Score=92.41 Aligned_cols=129 Identities=14% Similarity=0.115 Sum_probs=82.4
Q ss_pred CCCCeEEEEccch--hHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---Hhcc--
Q 022451 101 PNPKTIFIMGGGE--GSTAREIL-RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESR-- 172 (297)
Q Consensus 101 ~~~~~VL~iG~G~--G~~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---l~~~-- 172 (297)
....+|||||||+ +..+.+++ +..|..+|++||.||.|++.||+.+... ...+++++.+|.++. +...
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhccccc
Confidence 3457999999996 33344443 3456789999999999999999987532 125799999999775 2111
Q ss_pred CCCce-----EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHH
Q 022451 173 KESYD-----VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (297)
Q Consensus 173 ~~~yD-----~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~ 239 (297)
.+.|| .|++...-++. +. .---...++. +.+.|+|||+|++....+. ...+..+.+...++
T Consensus 153 ~~~~D~~~p~av~~~avLH~l--~d-~~~p~~~l~~-l~~~L~PGG~Lvls~~~~d--~~p~~~~~~~~~~~ 218 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFV--LD-EDDAVGIVRR-LLEPLPSGSYLAMSIGTAE--FAPQEVGRVAREYA 218 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGS--CG-GGCHHHHHHH-HHTTSCTTCEEEEEEECCT--TSHHHHHHHHHHHH
T ss_pred ccccCcCCcchHHhhhhHhcC--Cc-hhhHHHHHHH-HHHhCCCCcEEEEEeccCC--CCHHHHHHHHHHHH
Confidence 23455 45565543331 10 0001367888 7999999999998864331 22333444444444
No 242
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.83 E-value=3.3e-08 Score=91.82 Aligned_cols=105 Identities=18% Similarity=0.145 Sum_probs=80.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
...++|||||||+|.++..+++.+|..++++.|+ |.+++.|++++... ..+|++++.+|.++ .....+|+|+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~~~~~~D~~~ 249 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---DPLPEADLYI 249 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---SCCCCCSEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---CCCCCceEEE
Confidence 3467999999999999999999888889999998 99999999987643 24799999999643 3445689998
Q ss_pred EcCCC-CCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLAD-PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~-~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+-..- .| + .-....+++. +++.|+|||.+++..
T Consensus 250 ~~~vlh~~---~--d~~~~~iL~~-~~~al~pgg~lli~e 283 (353)
T 4a6d_A 250 LARVLHDW---A--DGKCSHLLER-IYHTCKPGGGILVIE 283 (353)
T ss_dssp EESSGGGS---C--HHHHHHHHHH-HHHHCCTTCEEEEEE
T ss_pred eeeecccC---C--HHHHHHHHHH-HHhhCCCCCEEEEEE
Confidence 86442 22 1 0012367888 799999999887764
No 243
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.82 E-value=1.6e-09 Score=102.57 Aligned_cols=103 Identities=18% Similarity=0.204 Sum_probs=73.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++. ..+|+++|+++.+++.|++. ... ....++..+....+...+++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~------~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIR------VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCC------EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCC------cceeeechhhHhhcccCCCCEEEEE
Confidence 45779999999999999999986 35899999999999999986 111 1111222232333433457899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-.. .+ --..+++. ++++|+|||++++..
T Consensus 177 ~~~vl~h--~~----d~~~~l~~-~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCH--IP----YVQSVLEG-VDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGG--CT----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECChHHh--cC----CHHHHHHH-HHHHcCCCeEEEEEe
Confidence 9765322 11 12478999 899999999999874
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.81 E-value=4.8e-09 Score=92.11 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=68.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--ccCC-Cce
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKE-SYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~--~~~~-~yD 177 (297)
..+++|||||||+|.++..+++. +..+|++||+++.+++.|++.. +++......-..++. .... .||
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d 105 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD---------ERVVVMEQFNFRNAVLADFEQGRPS 105 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC---------TTEEEECSCCGGGCCGGGCCSCCCS
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC---------ccccccccceEEEeCHhHcCcCCCC
Confidence 45679999999999999999987 4569999999999999987742 343332221122221 1122 378
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.+..|..-. .+ ..+++. +++.|+|||.+++.
T Consensus 106 ~~~~D~v~~-------~l--~~~l~~-i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 106 FTSIDVSFI-------SL--DLILPP-LYEILEKNGEVAAL 136 (232)
T ss_dssp EEEECCSSS-------CG--GGTHHH-HHHHSCTTCEEEEE
T ss_pred EEEEEEEhh-------hH--HHHHHH-HHHhccCCCEEEEE
Confidence 887776421 11 467888 79999999998875
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.81 E-value=2e-08 Score=91.12 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=77.9
Q ss_pred CCCCCeEEEEcc------chhHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEE-EEcchHHHHhc
Q 022451 100 HPNPKTIFIMGG------GEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELES 171 (297)
Q Consensus 100 ~~~~~~VL~iG~------G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~-~~~Da~~~l~~ 171 (297)
.+++.+|||||| |.|+ ..+++..+ ..+|++||+++. + +++++ +.+|+.+.-
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~v~~~i~gD~~~~~-- 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SDADSTLIGDCATVH-- 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CSSSEEEESCGGGCC--
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CCCEEEEECccccCC--
Confidence 356779999999 5577 33343333 579999999998 1 35778 999987642
Q ss_pred cCCCceEEEEcCCCCCCC-----CC-ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCc
Q 022451 172 RKESYDVIIGDLADPIEG-----GP-CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKY 244 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~-----~p-~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~ 244 (297)
..++||+|++|...+... .. ...+ -.+.++. +.+.|+|||.|++..-.. .....+...+++. |..
T Consensus 120 ~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l-~~~~l~~-a~r~LkpGG~~v~~~~~~------~~~~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 120 TANKWDLIISDMYDPRTKHVTKENDSKEGF-FTYLCGF-IKQKLALGGSIAVKITEH------SWNADLYKLMGHFSWWT 191 (290)
T ss_dssp CSSCEEEEEECCCCCC---CCSCCCCCCTH-HHHHHHH-HHHHEEEEEEEEEEECSS------SCCHHHHHHHTTEEEEE
T ss_pred ccCcccEEEEcCCccccccccccccchHHH-HHHHHHH-HHHhcCCCcEEEEEEecc------CCHHHHHHHHHHcCCcE
Confidence 236799999997533210 00 0112 2467888 799999999999864211 1124666777776 766
Q ss_pred eeEE
Q 022451 245 VVPY 248 (297)
Q Consensus 245 v~~~ 248 (297)
+...
T Consensus 192 v~~~ 195 (290)
T 2xyq_A 192 AFVT 195 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 246
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.80 E-value=8.3e-09 Score=95.48 Aligned_cols=104 Identities=20% Similarity=0.141 Sum_probs=75.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+...+|||||||+|..+..+++..+..+++++|+ +.++. ++...... ..+|++++.+|..+. .+ .||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~~~---~p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFLRE---VP-HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTTTC---CC-CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCCCC---CC-CCcEEE
Confidence 5678999999999999999998777889999999 55555 44332211 236899999998632 23 899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 253 ~~~vlh~--~~--d~~~~~~L~~-~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHN--WG--DEDSVRILTN-CRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTCCTTCEEEEEE
T ss_pred EehhccC--CC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 8754221 11 1111478898 799999999998764
No 247
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.76 E-value=1.3e-08 Score=91.70 Aligned_cols=112 Identities=16% Similarity=0.173 Sum_probs=73.9
Q ss_pred CCCeEEEEccchhH----HHHHHHhcCC----CcEEEEEECCHHHHHHHHhhhh-hcc----------------CCCCC-
Q 022451 102 NPKTIFIMGGGEGS----TAREILRHKT----VEKVVMCDIDEEVVEFCKSYLV-VNK----------------EAFSD- 155 (297)
Q Consensus 102 ~~~~VL~iG~G~G~----~~~~l~~~~~----~~~v~~VEid~~vi~~a~~~f~-~~~----------------~~~~~- 155 (297)
.+.+||++|||+|. ++..+.+..+ ..+|+++|+|+.+++.|++... ... ....+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5555555422 3589999999999999998631 000 00001
Q ss_pred ---------CCeEEEEcchHHH-HhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 156 ---------PRLELVINDARAE-LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 156 ---------~rv~~~~~Da~~~-l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|++...|..+. + ...++||+|++-..-... .+ -.....++. +.+.|+|||.|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~-~~~~~fDlI~crnvliyf-~~---~~~~~vl~~-~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY-NVPGPFDAIFCRNVMIYF-DK---TTQEDILRR-FVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC-CCCCCEEEEEECSSGGGS-CH---HHHHHHHHH-HGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCC-CcCCCeeEEEECCchHhC-CH---HHHHHHHHH-HHHHhCCCcEEEEEe
Confidence 3689999997651 1 113689999995321100 00 012467888 799999999999853
No 248
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.76 E-value=3.3e-08 Score=90.14 Aligned_cols=79 Identities=29% Similarity=0.347 Sum_probs=65.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---HhccC-CCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK-ESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---l~~~~-~~y 176 (297)
.++.+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++...+ ++++++++|+.+. +.... .+|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-----~~v~~v~~d~~~l~~~l~~~g~~~~ 99 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-----DRVSLFKVSYREADFLLKTLGIEKV 99 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-----TTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCHHHHHHHHHhcCCCCC
Confidence 46789999999999999999987656799999999999999999876442 6899999998664 22211 579
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|.|++|+.
T Consensus 100 D~Vl~D~g 107 (301)
T 1m6y_A 100 DGILMDLG 107 (301)
T ss_dssp EEEEEECS
T ss_pred CEEEEcCc
Confidence 99999985
No 249
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.75 E-value=1.4e-08 Score=96.30 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=65.7
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~Ii 180 (297)
.+.+|||+|||+|..+..+++. ..+|++||+|+.+++.|++++...... -.+++++.+|+.+++.. ..++||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g--l~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE--GKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT--TCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC--CCcEEEEECcHHHhhhhccCCCceEEE
Confidence 4789999999999999988875 469999999999999999998744101 15799999999988754 235799999
Q ss_pred EcCC
Q 022451 181 GDLA 184 (297)
Q Consensus 181 ~D~~ 184 (297)
+|++
T Consensus 169 lDPP 172 (410)
T 3ll7_A 169 VDPA 172 (410)
T ss_dssp ECCE
T ss_pred ECCC
Confidence 9987
No 250
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.75 E-value=2.7e-08 Score=89.83 Aligned_cols=76 Identities=18% Similarity=0.380 Sum_probs=62.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.+++.+.... ..++++++.+|+.++ .-..||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~D~~~~---~~~~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP---VASKLQVLVGDVLKT---DLPFFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEESCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEEcceecc---cchhhcEEE
Confidence 46789999999999999999986 3589999999999999999875321 125899999998654 224799999
Q ss_pred EcCC
Q 022451 181 GDLA 184 (297)
Q Consensus 181 ~D~~ 184 (297)
++++
T Consensus 99 ~nlp 102 (285)
T 1zq9_A 99 ANLP 102 (285)
T ss_dssp EECC
T ss_pred EecC
Confidence 9875
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.75 E-value=2.6e-08 Score=98.30 Aligned_cols=77 Identities=17% Similarity=0.296 Sum_probs=64.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~I 179 (297)
.+|.+|||||||+|.++..+++. ..+|++||+++.+++.||.+....+ .-+++++++|+.+.... .+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhccCCCccEE
Confidence 56789999999999999999986 4689999999999999999875432 23689999999887654 45789999
Q ss_pred EEcC
Q 022451 180 IGDL 183 (297)
Q Consensus 180 i~D~ 183 (297)
++--
T Consensus 139 ~~~e 142 (569)
T 4azs_A 139 IGLS 142 (569)
T ss_dssp EEES
T ss_pred EECc
Confidence 9864
No 252
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.74 E-value=1.1e-08 Score=95.51 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=74.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
....+|||||||+|.++..+++..|..+++++|+ |.+++.|++ .++++++.+|..+.+ . +. |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~~--p-~~-D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDGV--P-KG-DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTCC--C-CC-SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCCC--C-CC-CEEE
Confidence 3468999999999999999998777889999999 999877664 268999999986522 2 23 9998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+ .-....+++. +++.|+|||.+++..
T Consensus 267 ~~~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 267 IKWICHD--WS--DEHCLKLLKN-CYAALPDHGKVIVAE 300 (368)
T ss_dssp EESCGGG--BC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred Eechhhc--CC--HHHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 8754221 01 0012367888 799999999988764
No 253
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.74 E-value=1e-08 Score=91.53 Aligned_cols=80 Identities=14% Similarity=0.112 Sum_probs=64.9
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCH-------HHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-C
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE-------EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-K 173 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~ 173 (297)
.+.+|||+|||+|..+..+++. ..+|+++|+++ .+++.|+++...++. ..+++++.+|+.+++... +
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEECCHHHHHHhhhc
Confidence 4579999999999999999985 46899999999 999999988654321 246999999999987642 2
Q ss_pred --CCceEEEEcCCCC
Q 022451 174 --ESYDVIIGDLADP 186 (297)
Q Consensus 174 --~~yD~Ii~D~~~~ 186 (297)
++||+|++|++-+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999998643
No 254
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.73 E-value=1.1e-08 Score=95.40 Aligned_cols=98 Identities=20% Similarity=0.196 Sum_probs=75.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|..+..+++..+..+++++|+ |.+++.|+++ ++++++.+|..+. .+. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VPQ-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CCC-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CCC-CCEEE
Confidence 4578999999999999999998777788999999 9998877642 5799999998652 223 99999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...-+. .+ ......+++. +++.|+|||.+++.
T Consensus 273 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 273 LKAVCHN--WS--DEKCIEFLSN-CHKALSPNGKVIIV 305 (372)
T ss_dssp EESSGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Eeccccc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8754221 11 1112378898 79999999998876
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=2.5e-08 Score=90.73 Aligned_cols=76 Identities=17% Similarity=0.331 Sum_probs=63.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++.+|+.++- -....||+|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~-~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD-LNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC-GGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC-cccCCccEE
Confidence 346779999999999999999986 47999999999999999998762 268999999987642 123469999
Q ss_pred EEcCC
Q 022451 180 IGDLA 184 (297)
Q Consensus 180 i~D~~ 184 (297)
+.+++
T Consensus 119 v~NlP 123 (295)
T 3gru_A 119 VANLP 123 (295)
T ss_dssp EEECC
T ss_pred EEeCc
Confidence 98865
No 256
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.72 E-value=1.8e-08 Score=93.34 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.+.+|||||||+|..+..+++..|..+++++|+ |.+++.|+++ ++++++.+|..+.+ + .||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~~---p-~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTSI---P-NADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTCC---C-CCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCCC---C-CccEEE
Confidence 4568999999999999999998777789999999 9999887752 45999999976522 2 499999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCC---CcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p---gGvl~~~~ 219 (297)
+...-+. .+ ......+++. +++.|+| ||.+++..
T Consensus 252 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 252 LKYILHN--WT--DKDCLRILKK-CKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHHSGGGCCCEEEEEE
T ss_pred eehhhcc--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEEE
Confidence 8754221 11 1112378898 7999999 99887764
No 257
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.72 E-value=9.1e-09 Score=91.58 Aligned_cols=105 Identities=21% Similarity=0.130 Sum_probs=79.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.|.+|||||||.|-++..+....+..+++++|+|+.+++++++++...+ .+.++.+.|...- ....+||+|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-----~~~~~~v~D~~~~--~p~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-----VPHRTNVADLLED--RLDEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-----CCEEEEECCTTTS--CCCSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEeeeccc--CCCCCcchHH
Confidence 66899999999999999998887788999999999999999999987653 5588888985332 2467899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...-|.- ..--....| . +.+.|+++|+++-.
T Consensus 204 ~lkti~~L----e~q~kg~g~-~-ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 204 LLKTLPCL----ETQQRGSGW-E-VIDIVNSPNIVVTF 235 (281)
T ss_dssp ETTCHHHH----HHHSTTHHH-H-HHHHSSCSEEEEEE
T ss_pred HHHHHHHh----hhhhhHHHH-H-HHHHhCCCCEEEec
Confidence 88652210 000011344 4 56899999988644
No 258
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.72 E-value=3.6e-08 Score=84.26 Aligned_cols=128 Identities=18% Similarity=0.176 Sum_probs=82.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+. .+++++|+++. +++++.+|+.+ +....++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQ-VPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTS-CSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEecccc-CCCCCCCEeEEE
Confidence 456899999999999988762 57999999987 24567778765 223356899999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhh-CCceeEEEEecCccCCce
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKYVVPYSAHIPSFADTW 259 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~vp~~~~~~ 259 (297)
+...-+. + -...+++. +.+.|+|||.+++...... .. ....+.+.+++. |..+. ....+..+
T Consensus 121 ~~~~l~~---~----~~~~~l~~-~~~~L~~gG~l~i~~~~~~-~~---~~~~~~~~l~~~Gf~~~~-----~~~~~~~~ 183 (215)
T 2zfu_A 121 FCLSLMG---T----NIRDFLEE-ANRVLKPGGLLKVAEVSSR-FE---DVRTFLRAVTKLGFKIVS-----KDLTNSHF 183 (215)
T ss_dssp EESCCCS---S----CHHHHHHH-HHHHEEEEEEEEEEECGGG-CS---CHHHHHHHHHHTTEEEEE-----EECCSTTC
T ss_pred Eehhccc---c----CHHHHHHH-HHHhCCCCeEEEEEEcCCC-CC---CHHHHHHHHHHCCCEEEE-----EecCCCeE
Confidence 8754322 1 12478888 7999999999988642110 11 234555666654 44332 11123345
Q ss_pred eEEEEecCCCC
Q 022451 260 GWIMVSIYNPH 270 (297)
Q Consensus 260 ~~~~as~~~~~ 270 (297)
.++.+.|....
T Consensus 184 ~~~~~~k~~~~ 194 (215)
T 2zfu_A 184 FLFDFQKTGPP 194 (215)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEecCcc
Confidence 66666665433
No 259
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.71 E-value=1.4e-08 Score=94.73 Aligned_cols=99 Identities=21% Similarity=0.142 Sum_probs=75.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
....+|||||||+|.++..+++..|..+++++|+ |.+++.|++ .++++++.+|..+-+ . +. |+|+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~~--p-~~-D~v~ 264 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKEV--P-SG-DTIL 264 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTCC--C-CC-SEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCCC--C-CC-CEEE
Confidence 4568999999999999999998777889999999 998877664 268999999986522 2 23 9998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+...-+. .+. -....+++. +++.|+|||.+++..
T Consensus 265 ~~~vlh~--~~d--~~~~~~L~~-~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 265 MKWILHD--WSD--QHCATLLKN-CYDALPAHGKVVLVQ 298 (364)
T ss_dssp EESCGGG--SCH--HHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred ehHHhcc--CCH--HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 8654221 010 012367888 799999999998764
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.71 E-value=5.7e-08 Score=87.27 Aligned_cols=99 Identities=19% Similarity=0.192 Sum_probs=71.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.+. +|||||||+|.++..+++.. .+|++||+|+++++.+++.+. +.+++++++|+.++-......+|.|+
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~~~~~~~iv 115 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEEVPQGSLLV 115 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGGSCTTEEEE
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhhccCccEEE
Confidence 345 99999999999999999863 689999999999999999764 25899999998775222223689999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.+++-.. -+.-+++. +....-+.+++.++
T Consensus 116 ~NlPy~i--------ss~il~~l-l~~~~~~~~~lm~Q 144 (271)
T 3fut_A 116 ANLPYHI--------ATPLVTRL-LKTGRFARLVFLVQ 144 (271)
T ss_dssp EEECSSC--------CHHHHHHH-HHHCCEEEEEEEEE
T ss_pred ecCcccc--------cHHHHHHH-hcCCCCCEEEEEee
Confidence 9975322 22233443 33322246677777
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.70 E-value=3.6e-08 Score=87.83 Aligned_cols=76 Identities=20% Similarity=0.378 Sum_probs=61.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-Hhcc--CCCc
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR--KESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-l~~~--~~~y 176 (297)
..++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++.+|+.++ +... .++|
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~ 98 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPL 98 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCe
Confidence 3467899999999999999999863 7999999999999999998753 36899999999775 3221 3568
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
| |+.+++
T Consensus 99 ~-vv~NlP 105 (255)
T 3tqs_A 99 R-VVGNLP 105 (255)
T ss_dssp E-EEEECC
T ss_pred E-EEecCC
Confidence 8 777764
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.67 E-value=9.6e-08 Score=84.22 Aligned_cols=75 Identities=21% Similarity=0.358 Sum_probs=59.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++-......| .|+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~~-~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPKNQSY-KIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCSSCCC-EEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCcccCCCe-EEE
Confidence 456799999999999999999874 7899999999999999998642 2689999999876522112345 577
Q ss_pred EcCC
Q 022451 181 GDLA 184 (297)
Q Consensus 181 ~D~~ 184 (297)
++++
T Consensus 100 ~nlP 103 (244)
T 1qam_A 100 GNIP 103 (244)
T ss_dssp EECC
T ss_pred EeCC
Confidence 7764
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.65 E-value=8.5e-08 Score=90.28 Aligned_cols=111 Identities=12% Similarity=-0.031 Sum_probs=77.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFC 142 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 142 (297)
.....+||.+||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 4567899999999999988875321 14699999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCC--CcEEEEec
Q 022451 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQA 219 (297)
Q Consensus 143 ~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p--gGvl~~~~ 219 (297)
+++....+ -..+++++.+|+.++.. ..+||+|++|++-...-+.... -.++|+. +.+.|++ ||.+.+-+
T Consensus 273 r~Na~~~g---l~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~~~~--l~~ly~~-lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREVG---LEDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLDDKA--VDILYNE-MGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHTT---CTTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSCHHH--HHHHHHH-HHHHHTTCTTSEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChHHCCc--cCCcCEEEECCchhhccCCHHH--HHHHHHH-HHHHHhhCCCcEEEEEE
Confidence 99986543 13579999999987532 3589999999874321111011 1345555 4444444 88777665
No 264
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.63 E-value=2.2e-07 Score=87.76 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=76.1
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFC 142 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 142 (297)
.....|||.+||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 4567899999999999888775321 14699999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCC--CCcEEEEec
Q 022451 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLN--PEGIFVTQA 219 (297)
Q Consensus 143 ~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~--pgGvl~~~~ 219 (297)
+++....+ -+.+++++.+|+.++.. ..+||+|++|++-....+.... -.++|+. +.+.|+ +||.+.+-+
T Consensus 280 r~Na~~~g---l~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~~~~--l~~ly~~-lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAG---LGDLITFRQLQVADFQT--EDEYGVVVANPPYGERLEDEEA--VRQLYRE-MGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTT---CTTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHHHHH--HHHHHHH-HHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChHhCCC--CCCCCEEEECCCCccccCCchh--HHHHHHH-HHHHHhcCCCCEEEEEE
Confidence 99987543 13579999999987532 3589999999873221000001 1235554 444444 488776654
No 265
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.63 E-value=4e-08 Score=86.56 Aligned_cols=102 Identities=16% Similarity=0.143 Sum_probs=75.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.|.+|||||||.|.++..+. +..+++++|||+.+++.+++++... .++.++.+.|...- ....+||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~--~~~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA--PPAEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS--CCCCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC--CCCCCcchHH
Confidence 678999999999999998877 5789999999999999999997654 37789999996433 2456899998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+...-|.- .+.-....++ +.+.|+++|+++-.
T Consensus 174 llk~lh~L----E~q~~~~~~~--ll~aL~~~~vvVsf 205 (253)
T 3frh_A 174 IFKLLPLL----EREQAGSAMA--LLQSLNTPRMAVSF 205 (253)
T ss_dssp EESCHHHH----HHHSTTHHHH--HHHHCBCSEEEEEE
T ss_pred HHHHHHHh----hhhchhhHHH--HHHHhcCCCEEEEc
Confidence 77542110 0111113443 45699999988643
No 266
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.63 E-value=3.7e-08 Score=94.33 Aligned_cols=114 Identities=14% Similarity=0.040 Sum_probs=80.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC-------------CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK-------------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA 167 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~ 167 (297)
....+|||.|||+|+++..+.++. ...+++++|+|+.++++|+.++...+. ...+++++++|+..
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~--~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI--GTDRSPIVCEDSLE 247 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC--CSSCCSEEECCTTT
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC--CcCCCCEeeCCCCC
Confidence 345699999999999988877641 235799999999999999998765431 11267899999755
Q ss_pred HHhccCCCceEEEEcCCCCCCCCCccC-----------cccHHHHHHHHcccCCCCcEEEEec
Q 022451 168 ELESRKESYDVIIGDLADPIEGGPCYK-----------LYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 168 ~l~~~~~~yD~Ii~D~~~~~~~~p~~~-----------L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.. ...+||+|+.++|-......... -....|++. +.+.|+|||.+++-.
T Consensus 248 ~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 248 KE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQH-MMLMLKTGGRAAVVL 307 (445)
T ss_dssp SC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Cc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHH-HHHHhccCCEEEEEE
Confidence 32 23489999999873211000000 012478998 789999999887654
No 267
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.62 E-value=5.3e-08 Score=86.85 Aligned_cols=82 Identities=17% Similarity=0.107 Sum_probs=65.0
Q ss_pred CeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc--CCCCC---CCeEEEEcchHHHHhccCCCceE
Q 022451 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSD---PRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~--~~~~~---~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+|||+|||.|..+..+++. ..+|++||+++.+.+++++.+.... ...+. .|++++.+|+.++++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 79999999999999999986 3579999999999888887764211 01111 57999999999998765557999
Q ss_pred EEEcCCCCC
Q 022451 179 IIGDLADPI 187 (297)
Q Consensus 179 Ii~D~~~~~ 187 (297)
|++|++-+.
T Consensus 168 V~lDP~y~~ 176 (258)
T 2oyr_A 168 VYLDPMFPH 176 (258)
T ss_dssp EEECCCCCC
T ss_pred EEEcCCCCC
Confidence 999987543
No 268
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.61 E-value=4.7e-07 Score=84.41 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=89.6
Q ss_pred hcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc--CCCCCCCeEEEEcchHHHHhccCCC
Q 022451 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSDPRLELVINDARAELESRKES 175 (297)
Q Consensus 98 ~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~--~~~~~~rv~~~~~Da~~~l~~~~~~ 175 (297)
+...++.+|||+++|.|+=+.+++.......|+++|+++.-++..++++.... ......++.+...|++.+-....++
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 34456789999999999988888887666789999999999998888775321 1112357999999999886656688
Q ss_pred ceEEEEcCCCCC------CCCCcc-C---------c--ccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 176 YDVIIGDLADPI------EGGPCY-K---------L--YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 176 yD~Ii~D~~~~~------~~~p~~-~---------L--~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
||.|++|++=.. ...|.. . | ...+.+.. +.+.|+|||+|+-.+++.
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~-a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAA-GLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHH-HHHTEEEEEEEEEEESCC
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEEEEEeCCC
Confidence 999999998211 001100 0 0 12456666 678999999998887654
No 269
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.60 E-value=4.6e-08 Score=92.11 Aligned_cols=111 Identities=15% Similarity=0.113 Sum_probs=76.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFC 142 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 142 (297)
....+|||.|||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4567899999999999988875411 14799999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCC--CcEEEEec
Q 022451 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQA 219 (297)
Q Consensus 143 ~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p--gGvl~~~~ 219 (297)
+++....+ -+.++++..+|+.++.. ..+||+|++|++-...-+.... -.++|+. +.+.|++ ||.+.+-+
T Consensus 274 r~Na~~~g---l~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~~~~--l~~ly~~-lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 274 RENAEIAG---VDEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLEDKDS--VKQLYKE-LGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHT---CGGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHHHHH--HHHHHHH-HHHHHHTSBSCEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChhhcCc--CCCCcEEEECCCCcCccCCHHH--HHHHHHH-HHHHHhhCCCCEEEEEE
Confidence 99987543 12479999999887542 4589999999873221010001 1245555 4445544 77666654
No 270
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.60 E-value=1e-08 Score=91.69 Aligned_cols=163 Identities=12% Similarity=0.024 Sum_probs=100.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
....+|||||||.|++++.+++..+..++.++++.-++. ..+...... +.++..+.+|. +...-...+||+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~-dv~~l~~~~~DlVl 145 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKT-DIHRLEPVKCDTLL 145 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSC-CTTTSCCCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEeccc-eehhcCCCCccEEE
Confidence 456789999999999999998876677888998874431 001110000 12334444443 11122357899999
Q ss_pred EcCCCCCCCCCc-cCcccHHHHHHHHcccCCCC-cEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecC-ccC-
Q 022451 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIP-SFA- 256 (297)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg-Gvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp-~~~- 256 (297)
+|.... ...+. ....+...++. +.+.|+|| |.|++..-.| -.+....++..|++.|..|..+. | |..
T Consensus 146 sD~apn-sG~~~~D~~rs~~LL~~-a~~~LkpG~G~FV~KVf~p----yg~~~~~l~~~lk~~F~~V~~~K---PaSR~~ 216 (277)
T 3evf_A 146 CDIGES-SSSSVTEGERTVRVLDT-VEKWLACGVDNFCVKVLAP----YMPDVLEKLELLQRRFGGTVIRN---PLSRNS 216 (277)
T ss_dssp ECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT----TSHHHHHHHHHHHHHHCCEEECC---TTSCTT
T ss_pred ecCccC-cCchHHHHHHHHHHHHH-HHHHhCCCCCeEEEEecCC----CCccHHHHHHHHHHhcCCEEEEe---CCCCCC
Confidence 998633 21110 11122234566 68999999 9999975322 15667889999999999987554 4 222
Q ss_pred CceeEEEEecCCCCCCccccccc
Q 022451 257 DTWGWIMVSIYNPHSHSILSLSY 279 (297)
Q Consensus 257 ~~~~~~~as~~~~~~~~i~~~~~ 279 (297)
..-.|++|..+.+..+.++.+++
T Consensus 217 S~E~Y~V~~~r~n~~~~v~~~s~ 239 (277)
T 3evf_A 217 THEMYYVSGARSNVTFTVNQTSR 239 (277)
T ss_dssp CCCEEEESSCCCCHHHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHH
Confidence 22367777777666555555543
No 271
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.58 E-value=6.7e-08 Score=87.84 Aligned_cols=75 Identities=21% Similarity=0.312 Sum_probs=58.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++...+ .++++++.+|+..+ ...+||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~---~~~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKT---VFPKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSS---CCCCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhC---CcccCCEEE
Confidence 46789999999999999999986 4699999999999999999875432 26899999998654 235799999
Q ss_pred EcCC
Q 022451 181 GDLA 184 (297)
Q Consensus 181 ~D~~ 184 (297)
++++
T Consensus 112 ~n~p 115 (299)
T 2h1r_A 112 ANIP 115 (299)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9975
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.54 E-value=6.9e-08 Score=89.54 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=74.3
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
...+|||||||+|.++..+++..+..+++++|+ |.+++.|++ .++++++.+|..+- . ..||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~-~~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFKS---I-PSADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTTC---C-CCCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCCC---C-CCceEEEE
Confidence 568999999999999999998777789999999 888876664 14699999997651 2 25999998
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCC---CcEEEEec
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQA 219 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p---gGvl~~~~ 219 (297)
...-+. .+ .-....+++. +++.|+| ||.+++..
T Consensus 258 ~~vlh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHD--WN--DEQSLKILKN-SKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHTGGGGGGCEEEEEE
T ss_pred cccccC--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEEE
Confidence 754221 11 1112378888 7999999 99887753
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.53 E-value=5e-07 Score=80.00 Aligned_cols=100 Identities=27% Similarity=0.400 Sum_probs=70.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-HhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-l~~~~~~yD~I 179 (297)
.++.+|||||||+|.++..+++. +..+|++||+|+.+++.++++ . .++++++.+|+.++ +......| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 46789999999999999999986 457999999999999999986 2 26899999998765 22211234 78
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcc-cCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKP-RLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~-~L~pgGvl~~~~ 219 (297)
+.+++- ...+.-+++. +.. ..-+.++++++.
T Consensus 100 v~NlPy--------~i~~~il~~l-l~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 100 VGNLPY--------NVASLIIENT-VYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEECCT--------TTHHHHHHHH-HHTGGGCSEEEEEEEH
T ss_pred EEECch--------hccHHHHHHH-HhcCCCCceEEEEEeH
Confidence 888753 2223333443 332 234567777763
No 274
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.53 E-value=3.4e-07 Score=82.25 Aligned_cols=125 Identities=12% Similarity=0.124 Sum_probs=93.6
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCCceE
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~yD~ 178 (297)
++..+|++=+|+|.++.++++ +..+++.||.++...+..++++.. +++++++..|+..+++. ...+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 467799999999999999998 348999999999999999998853 37899999999998874 3457999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHH--cccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCce
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYV 245 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~--~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (297)
|++|++-.. ...+. ..++. + ...+.|+|+++++. | ....+....+.+.+++.-..+
T Consensus 163 VfiDPPYe~-----k~~~~-~vl~~-L~~~~~r~~~Gi~v~WY--P--i~~~~~~~~~~~~l~~~~~~~ 220 (283)
T 2oo3_A 163 IFIDPSYER-----KEEYK-EIPYA-IKNAYSKFSTGLYCVWY--P--VVNKAWTEQFLRKMREISSKS 220 (283)
T ss_dssp EEECCCCCS-----TTHHH-HHHHH-HHHHHHHCTTSEEEEEE--E--ESSHHHHHHHHHHHHHHCSSE
T ss_pred EEECCCCCC-----CcHHH-HHHHH-HHHhCccCCCeEEEEEE--e--ccchHHHHHHHHHHHhcCCCe
Confidence 999986321 11222 22222 2 25788999999985 3 345566778888887654333
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.50 E-value=4.9e-07 Score=88.72 Aligned_cols=138 Identities=11% Similarity=0.037 Sum_probs=92.4
Q ss_pred CCCeEEEEccchhHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhccCCCc
Q 022451 102 NPKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKESY 176 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~--l~~~~~~y 176 (297)
...+|||.+||+|+++..+.++ .+..++.++|+|+.+.++|+.++...+. ..++++++.+|.... -.....+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV--PIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC--CcCccceEecceecccccccccccc
Confidence 4679999999999998777765 2357899999999999999998765431 225789999997543 11235689
Q ss_pred eEEEEcCCCC--CCCC---------------CccCcccHHHHHHHHcccCC-CCcEEEEecCCCCCcCCchHHHHHHHHH
Q 022451 177 DVIIGDLADP--IEGG---------------PCYKLYTKSFYEFVVKPRLN-PEGIFVTQAGPAGIFSHTEVFSCIYNTL 238 (297)
Q Consensus 177 D~Ii~D~~~~--~~~~---------------p~~~L~t~ef~~~~~~~~L~-pgGvl~~~~~~p~~~~~~~~~~~i~~~l 238 (297)
|+|+.++|-. +... |...-....|++. +.+.|+ |||.+++-+.. +..........+++.+
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~-~l~~Lk~~gGr~a~VlP~-g~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLH-GYYHLKQDNGVMAIVLPH-GVLFRGNAEGTIRKAL 376 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHH-HHHTBCTTTCEEEEEEET-HHHHCCTHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHH-HHHHhCCCceeEEEEecc-hHhhCCchhHHHHHHH
Confidence 9999998731 2100 0001112358898 789999 99988765421 1111223346677777
Q ss_pred HhhCC
Q 022451 239 RQVFK 243 (297)
Q Consensus 239 ~~~F~ 243 (297)
-+.+.
T Consensus 377 le~~~ 381 (542)
T 3lkd_A 377 LEEGA 381 (542)
T ss_dssp HHTTC
T ss_pred HhCCc
Confidence 66554
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.50 E-value=3.1e-07 Score=90.19 Aligned_cols=138 Identities=12% Similarity=-0.001 Sum_probs=89.6
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCC---------------CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKT---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da 165 (297)
+.+.+|||.+||+|+++..+.++.. ..++.++|+|+.++++|+.++...+. +.++.++.+|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI---DFNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC---CCBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC---Ccccceeccch
Confidence 4455999999999999877654311 35899999999999999998765531 23455588886
Q ss_pred HHHHhccCCCceEEEEcCCCC---CCC--------------------CCccCcccHHHHHHHHcccCCCCcEEEEecCCC
Q 022451 166 RAELESRKESYDVIIGDLADP---IEG--------------------GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (297)
Q Consensus 166 ~~~l~~~~~~yD~Ii~D~~~~---~~~--------------------~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p 222 (297)
...-.....+||+|+.++|-. +.. .|...-....|++. +.+.|+|||.+++-+..
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~aiVlP~- 397 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH-MLYHLAPTGSMALLLAN- 397 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH-HHHTEEEEEEEEEEEET-
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH-HHHHhccCceEEEEecc-
Confidence 443222346899999998732 110 11111112368898 78999999998766411
Q ss_pred CCcCCc-hHHHHHHHHHHhhCC
Q 022451 223 GIFSHT-EVFSCIYNTLRQVFK 243 (297)
Q Consensus 223 ~~~~~~-~~~~~i~~~l~~~F~ 243 (297)
+..... .....+.+.+-+.+.
T Consensus 398 g~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 398 GSMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHHHCCGGGHHHHHHHHHHTTC
T ss_pred hhhhcCcchHHHHHHHHHhCCc
Confidence 111122 345677777766654
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.49 E-value=1.9e-08 Score=89.95 Aligned_cols=161 Identities=13% Similarity=-0.002 Sum_probs=101.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc--chHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN--DARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~--Da~~~l~~~~~~yD~ 178 (297)
.+..+|||||||.|++++.+++..+..+|+++|+...+...+... .. .+.++..... |.. .....++|+
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-----~~-~g~~ii~~~~~~dv~---~l~~~~~Dv 159 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-----TT-LGWNLIRFKDKTDVF---NMEVIPGDT 159 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----CB-TTGGGEEEECSCCGG---GSCCCCCSE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-----cc-CCCceEEeeCCcchh---hcCCCCcCE
Confidence 456689999999999999999766778899999976532111110 00 1123332232 322 224578999
Q ss_pred EEEcCCCCCCCCC-ccCcccHHHHHHHHcccCCCC--cEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecC-c
Q 022451 179 IIGDLADPIEGGP-CYKLYTKSFYEFVVKPRLNPE--GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIP-S 254 (297)
Q Consensus 179 Ii~D~~~~~~~~p-~~~L~t~ef~~~~~~~~L~pg--Gvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp-~ 254 (297)
|++|.... ...+ ..+..+.+.++. +.+.|+|| |.|++..-.| -.+....++..|++.|..|..+. | |
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~-A~~~Lk~g~~G~Fv~KvF~p----yg~~~~~l~~~lk~~F~~V~~~K---PaS 230 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNC-AKQWLQEGNYTEFCIKVLCP----YTPLIMEELSRLQLKHGGGLVRV---PLS 230 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHH-HHHHHHHHCCCEEEEEESCC----CSHHHHHHHHHHHHHHCCEEECC---TTS
T ss_pred EEecCccC-CCChHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEEecC----CCccHHHHHHHHHHhcCCEEEEc---CCC
Confidence 99998643 2211 012222234555 67899999 9999985221 15667889999999999987554 4 2
Q ss_pred cC-CceeEEEEecCCCCCCccccccc
Q 022451 255 FA-DTWGWIMVSIYNPHSHSILSLSY 279 (297)
Q Consensus 255 ~~-~~~~~~~as~~~~~~~~i~~~~~ 279 (297)
.. ..-.|++|..+.+..+.++.+++
T Consensus 231 R~~S~E~Y~V~~~r~n~~~~v~~~s~ 256 (282)
T 3gcz_A 231 RNSTHEMYWVSGTRTDVVGTVSNVSR 256 (282)
T ss_dssp CTTCCCEEEETTCCCCSHHHHHHHHH
T ss_pred cccCcceeEEEecCCCccchHHHHHH
Confidence 22 22367777777666665555544
No 278
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.47 E-value=3.5e-07 Score=82.52 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=82.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcC-----CCcEEEEEECCHH--------------------------HHHHHHhhhhh
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEE--------------------------VVEFCKSYLVV 148 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~a~~~f~~ 148 (297)
...|++||++|+..|..+..++... +..+|+++|..+. .++.++++|..
T Consensus 104 ~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 104 NNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred cCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 3568999999999999887765421 3678999996421 46678888864
Q ss_pred ccCCCCCCCeEEEEcchHHHHhcc-CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 149 NKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 149 ~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+ +..++++++.+|+.+.|... .++||+|++|... .-.+..+|+. +..+|+|||++++--
T Consensus 184 ~g--l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--------y~~~~~~Le~-~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 184 YD--LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--------YESTWDTLTN-LYPKVSVGGYVIVDD 244 (282)
T ss_dssp TT--CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--------HHHHHHHHHH-HGGGEEEEEEEEESS
T ss_pred cC--CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--------cccHHHHHHH-HHhhcCCCEEEEEcC
Confidence 42 22479999999999988764 4689999999621 1124688898 799999999998753
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.44 E-value=3.2e-07 Score=90.10 Aligned_cols=138 Identities=8% Similarity=-0.021 Sum_probs=88.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC---C---------------CcEEEEEECCHHHHHHHHhhhhhccCCCCC---CCeE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK---T---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSD---PRLE 159 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~---~---------------~~~v~~VEid~~vi~~a~~~f~~~~~~~~~---~rv~ 159 (297)
....+|||.+||+|+++..+.++. . ..+++++|+|+.++++|+.++...+. .. .+.+
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi--~~~~~~~~~ 245 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI--EGNLDHGGA 245 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC--CCBGGGTBS
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC--CccccccCC
Confidence 345799999999999987776531 0 23799999999999999998765431 11 1378
Q ss_pred EEEcchHHHHhccCCCceEEEEcCCCCCCCCC--------ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHH
Q 022451 160 LVINDARAELESRKESYDVIIGDLADPIEGGP--------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVF 231 (297)
Q Consensus 160 ~~~~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p--------~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~ 231 (297)
++++|..........+||+|+.++|-...... ...-....|++. +.+.|+|||.+++-+. .+........
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~a~V~p-~~~L~~~~~~ 323 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH-IIETLHPGGRAAVVVP-DNVLFEGGKG 323 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH-HHHHEEEEEEEEEEEE-HHHHHCCTHH
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH-HHHHhCCCCEEEEEec-CcceecCcHH
Confidence 99999865433334689999999873211000 001112368888 7899999998876641 1111122234
Q ss_pred HHHHHHHHhhC
Q 022451 232 SCIYNTLRQVF 242 (297)
Q Consensus 232 ~~i~~~l~~~F 242 (297)
..+.+.|.+.+
T Consensus 324 ~~iR~~L~~~~ 334 (541)
T 2ar0_A 324 TDIRRDLMDKC 334 (541)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHhhcC
Confidence 55666665544
No 280
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.44 E-value=1.2e-07 Score=78.62 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=76.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCce
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD 177 (297)
..++.+||+||||. + .+|+++.|++.|++.+. .+++++.+|+.+.-.. .+++||
T Consensus 10 ~~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp CCTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEe
Confidence 35678999999985 1 39999999999998752 2489999998765321 457899
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCC---cCCchHHHHHHHHHHhh-C
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGI---FSHTEVFSCIYNTLRQV-F 242 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~---~~~~~~~~~i~~~l~~~-F 242 (297)
+|++...-++. .+ . ...+++. +++.|+|||.+++....... .........+.+.+++. |
T Consensus 66 ~V~~~~~l~~~-~~--~--~~~~l~~-~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 66 IILSGLVPGST-TL--H--SAEILAE-IARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEECCSTTCC-CC--C--CHHHHHH-HHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred EEEECChhhhc-cc--C--HHHHHHH-HHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 99986543321 01 1 2578999 89999999999985310000 00111245666777765 6
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.41 E-value=5.7e-07 Score=91.10 Aligned_cols=140 Identities=11% Similarity=0.044 Sum_probs=88.0
Q ss_pred CCCeEEEEccchhHHHHHHHhcCC---CcEEEEEECCHHHHHHH--HhhhhhccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKT---VEKVVMCDIDEEVVEFC--KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
.+.+|||.|||+|+++..+++..+ ..+++++|+|+.++++| +.++..+......+...+..+|....-.....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999887643 35799999999999999 5443321111112234666677654211234689
Q ss_pred eEEEEcCCCCC-CCCCcc-----------------C-----cccHHHHHHHHcccCCCCcEEEEecCCCCCcC--CchHH
Q 022451 177 DVIIGDLADPI-EGGPCY-----------------K-----LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVF 231 (297)
Q Consensus 177 D~Ii~D~~~~~-~~~p~~-----------------~-----L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~--~~~~~ 231 (297)
|+|+.++|-.. ...+.. . -....|++. +.+.|+|||.+++-+. ..+. .....
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~-Al~lLKpGGrLAfIlP--~s~Lf~sg~~~ 477 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLEL-VTELVQDGTVISAIMP--KQYLTAQGNES 477 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHH-HHHHSCTTCEEEEEEE--THHHHCCSHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHH-HHHhcCCCcEEEEEEC--hHHhccCChHH
Confidence 99999997311 100000 0 013357888 7899999999987652 1122 22345
Q ss_pred HHHHHHHHhhCCc
Q 022451 232 SCIYNTLRQVFKY 244 (297)
Q Consensus 232 ~~i~~~l~~~F~~ 244 (297)
+.+++.+.+.+.-
T Consensus 478 kkLRk~LLe~~~I 490 (878)
T 3s1s_A 478 KAFREFLVGNFGL 490 (878)
T ss_dssp HHHHHHHTTTTCE
T ss_pred HHHHHHHHhCCCe
Confidence 6667776666553
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.38 E-value=5.9e-07 Score=80.92 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=58.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCC--cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-HhccCC--
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTV--EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESRKE-- 174 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-l~~~~~-- 174 (297)
..++.+|||||||+|.++..+++.... .+|++||+|+.+++.+++.+ . ++++++.+|+.++ +.....
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~~~~~~~~~~ 111 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTFDFGSIARPG 111 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGCCGGGGSCSS
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcCChhHhcccc
Confidence 356789999999999999999986321 34999999999999999873 2 5799999999775 222111
Q ss_pred --CceEEEEcCC
Q 022451 175 --SYDVIIGDLA 184 (297)
Q Consensus 175 --~yD~Ii~D~~ 184 (297)
..+.|+.+++
T Consensus 112 ~~~~~~vv~NlP 123 (279)
T 3uzu_A 112 DEPSLRIIGNLP 123 (279)
T ss_dssp SSCCEEEEEECC
T ss_pred cCCceEEEEccC
Confidence 2356777764
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.37 E-value=2.8e-07 Score=83.02 Aligned_cols=163 Identities=13% Similarity=0.049 Sum_probs=100.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~-Da~~~l~~~~~~yD~ 178 (297)
..+.++||||||+.|+++..+++..+...|+++|+....... +.....+..+-+.+..+ |.+ .....++|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~-----P~~~~~~~~~iv~~~~~~di~---~l~~~~~Dl 150 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEK-----PIHMQTLGWNIVKFKDKSNVF---TMPTEPSDT 150 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCC-----CCCCCBTTGGGEEEECSCCTT---TSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccc-----cccccccCCceEEeecCceee---ecCCCCcCE
Confidence 357889999999999999999986667789999996532100 00000000111223222 322 223578999
Q ss_pred EEEcCCCCCCCCC-ccCcccHHHHHHHHcccCCCC-cEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecC-cc
Q 022451 179 IIGDLADPIEGGP-CYKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIP-SF 255 (297)
Q Consensus 179 Ii~D~~~~~~~~p-~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp-~~ 255 (297)
|++|.... ...+ ..+.-+...++. +.+.|+|| |.|++..-.| -.+....++..|++.|..|..+. | |.
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~-A~~~LkpG~G~FV~KvF~~----yG~~~~~ll~~lk~~F~~V~~~K---PaSR 221 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLEN-FERWKHVNTENFCVKVLAP----YHPDVIEKLERLQLRFGGGIVRV---PFSR 221 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHH-HHHHCCTTCCEEEEEESST----TSHHHHHHHHHHHHHHCCEEECC---TTSC
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEEeccc----cCccHHHHHHHHHHhCCcEEEEe---CCCC
Confidence 99998633 2111 012222334665 67899999 9999985221 15667889999999999987553 4 22
Q ss_pred C-CceeEEEEecCCCCCCccccccc
Q 022451 256 A-DTWGWIMVSIYNPHSHSILSLSY 279 (297)
Q Consensus 256 ~-~~~~~~~as~~~~~~~~i~~~~~ 279 (297)
. ..-.|++|..+....+.++..++
T Consensus 222 ~~S~E~Y~V~~~r~n~~~~v~~~~~ 246 (300)
T 3eld_A 222 NSTHEMYYISGARNNITHMVNTTSR 246 (300)
T ss_dssp TTCCCEEEESSCCCCHHHHHHHHHH
T ss_pred CCChHHeeeccCCCCcchhHHHHHH
Confidence 2 23467778777666555554443
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.36 E-value=4.6e-07 Score=80.42 Aligned_cols=76 Identities=12% Similarity=0.239 Sum_probs=56.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-Hhcc---CCCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR---KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~-l~~~---~~~y 176 (297)
....+||+||||+|.++. +.+ .+..+|++||+|+.+++.+++.+.. .++++++.+|+.++ +... ....
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 91 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKMGQP 91 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHHTSC
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhhcccCCc
Confidence 456789999999999999 654 3222399999999999999987643 25899999998764 2211 1245
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|.|+.+++
T Consensus 92 ~~vvsNlP 99 (252)
T 1qyr_A 92 LRVFGNLP 99 (252)
T ss_dssp EEEEEECC
T ss_pred eEEEECCC
Confidence 78888875
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.36 E-value=1.8e-06 Score=86.18 Aligned_cols=105 Identities=22% Similarity=0.365 Sum_probs=73.1
Q ss_pred CCeEEEEccchhHHHHHHHhc----C---------CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH
Q 022451 103 PKTIFIMGGGEGSTAREILRH----K---------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL 169 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~----~---------~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l 169 (297)
.+.|||+|||+|.+...+++. . ...+|++||-||.++...+.... ++ + .++|+++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~-~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--W-KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--T-TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--C-CCeEEEEeCchhhcc
Confidence 457999999999996433221 1 23499999999987766555433 22 2 368999999999873
Q ss_pred h----ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 170 E----SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 170 ~----~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
. ...++.|+||+.+..-. +. ..| ..+.+.. +.+.|+|||+++
T Consensus 486 lp~~~~~~ekVDIIVSElmGsf--l~-nEL-~pe~Ld~-v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSF--GD-NEL-SPECLDG-VTGFLKPTTISI 531 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTT--BG-GGS-HHHHHHT-TGGGSCTTCEEE
T ss_pred cccccCCCCcccEEEEeccccc--cc-hhc-cHHHHHH-HHHhCCCCcEEE
Confidence 2 12578999999986322 11 122 3577777 689999999886
No 286
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.31 E-value=8.1e-07 Score=89.80 Aligned_cols=113 Identities=8% Similarity=-0.024 Sum_probs=75.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcC------------------------------------------CCcEEEEEECCHHH
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHK------------------------------------------TVEKVVMCDIDEEV 138 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~v 138 (297)
.....+||.+||+|+++.+++... +..+|+++|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 456789999999999988877531 12479999999999
Q ss_pred HHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc-CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHc---ccCCCCcE
Q 022451 139 VEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVK---PRLNPEGI 214 (297)
Q Consensus 139 i~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~-~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~---~~L~pgGv 214 (297)
++.|+++....+ -+.++++..+|+.++.... .++||+|++++|-...-+.... -.++|+. +. +.+.|||.
T Consensus 269 v~~A~~N~~~ag---v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~--l~~ly~~-l~~~lk~~~~g~~ 342 (703)
T 3v97_A 269 IQRARTNARLAG---IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPA--LIALHSL-LGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHTT---CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHH--HHHHHHH-HHHHHHHHCTTCE
T ss_pred HHHHHHHHHHcC---CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhH--HHHHHHH-HHHHHHhhCCCCe
Confidence 999999976543 1346999999988753221 2279999999874321111011 1234444 33 44557887
Q ss_pred EEEec
Q 022451 215 FVTQA 219 (297)
Q Consensus 215 l~~~~ 219 (297)
+.+-+
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76643
No 287
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.29 E-value=8.7e-07 Score=88.13 Aligned_cols=103 Identities=15% Similarity=0.266 Sum_probs=70.9
Q ss_pred CCeEEEEccchhHHHHHHH---hcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 103 PKTIFIMGGGEGSTAREIL---RHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~---~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+.|||+|||+|.+...++ +.. ...+|.+||-+|. ...|++....++ + +++|+++.+|.+++ ..+++.|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~--~-~dkVtVI~gd~eev--~LPEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE--W-GSQVTVVSSDMREW--VAPEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT--T-GGGEEEEESCTTTC--CCSSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc--C-CCeEEEEeCcceec--cCCcccCE
Confidence 3569999999999844433 322 1227899999985 556676655443 2 47899999999886 34589999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
||+....-. .. ..+. .+.+.. ..+.|||||+++
T Consensus 432 IVSEwMG~f--Ll-~E~m-levL~A-rdr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSF--AD-NELS-PECLDG-AQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTT--BG-GGCH-HHHHHH-HGGGEEEEEEEE
T ss_pred EEEEcCccc--cc-ccCC-HHHHHH-HHHhcCCCcEEc
Confidence 999887432 11 1221 245555 589999999886
No 288
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.19 E-value=6.4e-08 Score=85.14 Aligned_cols=75 Identities=19% Similarity=0.411 Sum_probs=59.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.|++++.. .++++++.+|+.++-....++| .|+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~f-~vv 98 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQFQFPNKQRY-KIV 98 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTTTTCCCSSEE-EEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhhcCcccCCCc-EEE
Confidence 456789999999999999999863 7899999999999999887641 3689999999876521112578 777
Q ss_pred EcCC
Q 022451 181 GDLA 184 (297)
Q Consensus 181 ~D~~ 184 (297)
++++
T Consensus 99 ~n~P 102 (245)
T 1yub_A 99 GNIP 102 (245)
T ss_dssp EECC
T ss_pred EeCC
Confidence 8765
No 289
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.12 E-value=1.9e-05 Score=70.87 Aligned_cols=136 Identities=17% Similarity=0.258 Sum_probs=82.2
Q ss_pred CCCCCeEEEEcc------chhHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc
Q 022451 100 HPNPKTIFIMGG------GEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR 172 (297)
Q Consensus 100 ~~~~~~VL~iG~------G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~ 172 (297)
.|...+||++|+ ..|+.. +.+..+. ..|+.+||.|-.. ++. .++.+|..+.. .
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s---------------da~-~~IqGD~~~~~--~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS---------------DAD-STLIGDCATVH--T 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC---------------SSS-EEEESCGGGEE--E
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc---------------CCC-eEEEccccccc--c
Confidence 477899999996 566632 2223343 5999999976441 233 44999976532 3
Q ss_pred CCCceEEEEcCCCCCCCC---Cc--cCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE
Q 022451 173 KESYDVIIGDLADPIEGG---PC--YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP 247 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~---p~--~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (297)
..+||+|++|........ +. ..-+.+..+.- +++.|+|||.|++.. +.... ...+..+++.|..|+.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdf-A~~~LkpGGsFvVKV-----FQGsg--~~~L~~lrk~F~~VK~ 238 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKI-----TEHSW--NADLYKLMGHFSWWTA 238 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEE-----CSSSC--CHHHHHHHTTEEEEEE
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHH-HHHhCcCCCEEEEEE-----ecCCC--HHHHHHHHhhCCeEEE
Confidence 578999999987432211 10 01122334444 688999999999985 22221 2335556679999888
Q ss_pred EEEecCccC-CceeEEEEe
Q 022451 248 YSAHIPSFA-DTWGWIMVS 265 (297)
Q Consensus 248 ~~~~vp~~~-~~~~~~~as 265 (297)
+.. .+.. ..-.|++|.
T Consensus 239 fK~--ASRa~SsEvYLVG~ 255 (344)
T 3r24_A 239 FVT--NVNASSSEAFLIGA 255 (344)
T ss_dssp EEE--GGGTTSSCEEEEEE
T ss_pred ECC--CCCCCCeeEEEEee
Confidence 741 1222 223566665
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.07 E-value=1.7e-05 Score=71.14 Aligned_cols=74 Identities=30% Similarity=0.258 Sum_probs=62.2
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---HhccC-CCc
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK-ESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---l~~~~-~~y 176 (297)
.++..++|++||.|+.+..+++. ..+|+++|.||.+++.|++ +. ++|++++++|..++ +.... .++
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~-------~~rv~lv~~~f~~l~~~L~~~g~~~v 90 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH-------LPGLTVVQGNFRHLKRHLAALGVERV 90 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC-------CTTEEEEESCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc-------cCCEEEEECCcchHHHHHHHcCCCCc
Confidence 45678999999999999999997 5799999999999999998 53 16899999998765 44322 579
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|.|+.|+.
T Consensus 91 DgIL~DLG 98 (285)
T 1wg8_A 91 DGILADLG 98 (285)
T ss_dssp EEEEEECS
T ss_pred CEEEeCCc
Confidence 99999985
No 291
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.05 E-value=4.8e-05 Score=76.26 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=82.1
Q ss_pred CCCeEEEEccchhHHHHHHHhcC------------CCcEEEEEEC---CHHHHHHHHhhhhh------------cc----
Q 022451 102 NPKTIFIMGGGEGSTAREILRHK------------TVEKVVMCDI---DEEVVEFCKSYLVV------------NK---- 150 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~a~~~f~~------------~~---- 150 (297)
+.-+||++|.|+|......++.. ..-+++.+|. +++.+..+-++++. +.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34689999999998765554321 1246889999 88877754443221 00
Q ss_pred ---CCCCC--CCeEEEEcchHHHHhcc----CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 151 ---EAFSD--PRLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 151 ---~~~~~--~rv~~~~~Da~~~l~~~----~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+++ -+++++.+|+++.|.+. ..+||+|++|.|.|.. . ..|++.++|+. +.++++|||.++..+
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-n--p~~w~~~~~~~-l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-N--PDMWTQNLFNA-MARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-C--GGGSCHHHHHH-HHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-C--hhhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 01122 34678999999999764 4679999999998752 2 47999999999 899999999998764
No 292
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.03 E-value=1e-05 Score=81.44 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCeEEEEccchhHHHHHHHhcC----------C--CcEEEEEECCH---HHHHHHHhhhhh------------c-----
Q 022451 102 NPKTIFIMGGGEGSTAREILRHK----------T--VEKVVMCDIDE---EVVEFCKSYLVV------------N----- 149 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~----------~--~~~v~~VEid~---~vi~~a~~~f~~------------~----- 149 (297)
++.+||++|.|+|.....+.+.. + ..+++.+|..| +.+..|-+.++. +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45789999999999765554421 1 15789999954 444433222210 0
Q ss_pred --cCCCCCC--CeEEEEcchHHHHhcc----CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 150 --KEAFSDP--RLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 150 --~~~~~~~--rv~~~~~Da~~~l~~~----~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...+.+. +++++.+|+++.|+.. ..++|+|++|.|.|.. . ..+++.+||+. +.++++|||.++..+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-n--p~~w~~~~~~~-l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-N--PDMWNEQLFNA-MARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---C--CTTCSHHHHHH-HHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-C--hhhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 0012233 5678999999999764 4689999999998752 2 47999999999 899999999998764
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.96 E-value=3.2e-05 Score=68.31 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=91.5
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCe---EEEEc-chHHHHhccCCC
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL---ELVIN-DARAELESRKES 175 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv---~~~~~-Da~~~l~~~~~~ 175 (297)
..+..+|+||||+.|++++.+++..+...|.+..+-.+. . -.+... ..+.+ ++..+ |.++ ....+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~~---~~~Gv~~i~~~~G~Df~~---~~~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPMLM---QSYGWNIVTMKSGVDVFY---KPSEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCCC---CSTTGGGEEEECSCCGGG---SCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCcc---cCCCceEEEeeccCCccC---CCCCC
Confidence 456889999999999999999986444455555543331 0 001110 01344 44447 8765 23468
Q ss_pred ceEEEEcCCCCCCCCCc-cCcccHHHHHHHHcccCCCCc-EEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEEecC
Q 022451 176 YDVIIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG-IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSAHIP 253 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG-vl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~~vp 253 (297)
+|+|++|... ....+. .+.-+...+.. +.+.|+||| .|++..-.+ ..+.+.++++.+++.|..+.. .-|
T Consensus 140 ~DvVLSDMAP-nSG~~~vD~~Rs~~aL~~-A~~~Lk~gG~~FvvKVFqg----~~~~~~~~l~~lk~~F~~vkv---k~p 210 (269)
T 2px2_A 140 SDTLLCDIGE-SSPSAEIEEQRTLRILEM-VSDWLSRGPKEFCIKILCP----YMPKVIEKLESLQRRFGGGLV---RVP 210 (269)
T ss_dssp CSEEEECCCC-CCSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT----TSHHHHHHHHHHHHHHCCEEE---CCT
T ss_pred CCEEEeCCCC-CCCccHHHHHHHHHHHHH-HHHHhhcCCcEEEEEECCC----CchHHHHHHHHHHHHcCCEEE---ECC
Confidence 9999999874 221110 11112224554 568999999 898875211 225677888899999999863 234
Q ss_pred cc-CC-ceeEEEEecCCCCCCcc
Q 022451 254 SF-AD-TWGWIMVSIYNPHSHSI 274 (297)
Q Consensus 254 ~~-~~-~~~~~~as~~~~~~~~i 274 (297)
.. .. .-.|++|..+....+.+
T Consensus 211 aSR~~S~E~YlVa~~~~n~~~~v 233 (269)
T 2px2_A 211 LSRNSNHEMYWVSGASGNIVHAV 233 (269)
T ss_dssp TSCTTCCCEEEETTCCSCHHHHH
T ss_pred CCCCCCccEEEEecccCcHHHHH
Confidence 32 22 23455555554444444
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.86 E-value=8.4e-05 Score=64.83 Aligned_cols=133 Identities=16% Similarity=0.093 Sum_probs=89.8
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~-Da~~~l~~~~~~yD~I 179 (297)
.....||||||+.|+.+..++...+..+|.++|+-+.-.+ .+..-..+.-+-++++.+ |.+ ++ ...++|.|
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-----~P~~~~s~gwn~v~fk~gvDv~-~~--~~~~~Dtl 148 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-----EPVPMSTYGWNIVKLMSGKDVF-YL--PPEKCDTL 148 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-----CCCCCCCTTTTSEEEECSCCGG-GC--CCCCCSEE
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-----CcchhhhcCcCceEEEecccee-ec--CCccccEE
Confidence 4566999999999999999998878889999999654221 111111233367899999 863 23 34779999
Q ss_pred EEcCCCCCCCCCc-cCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 180 IGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 180 i~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
++|... ....|. +.--+...++. +.+.|++ |-+++..-.|. ...+.+.++.|+..|..+.+.
T Consensus 149 lcDIge-Ss~~~~vE~~RtlrvLel-a~~wL~~-~~fc~KVl~py----~p~v~e~l~~lq~~fgg~lVR 211 (267)
T 3p8z_A 149 LCDIGE-SSPSPTVEESRTIRVLKM-VEPWLKN-NQFCIKVLNPY----MPTVIEHLERLQRKHGGMLVR 211 (267)
T ss_dssp EECCCC-CCSCHHHHHHHHHHHHHH-HGGGCSS-CEEEEEESCCC----SHHHHHHHHHHHHHHCCEEEC
T ss_pred EEecCC-CCCChhhhhhHHHHHHHH-HHHhccc-CCEEEEEccCC----ChhHHHHHHHHHHHhCCEeEe
Confidence 999874 211221 11123346666 6789998 88888875552 233457778889999987644
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.56 E-value=8.6e-05 Score=66.74 Aligned_cols=134 Identities=13% Similarity=0.025 Sum_probs=87.4
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~-Da~~~l~~~~~~yD~I 179 (297)
.....||||||+.|+++..++...++.+|.++|+-..-.+ .+..-..+.-+-|.++.+ |.+ ++. ..++|+|
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~Dv~-~l~--~~~~D~i 164 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVDVF-YRP--SECCDTL 164 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCCTT-SSC--CCCCSEE
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccCHh-hCC--CCCCCEE
Confidence 4566999999999999999888878889999999644110 010000111133777777 753 333 3679999
Q ss_pred EEcCCCCCCCCCc-cCcccHHHHHHHHcccCCCC-cEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 180 IGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 180 i~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg-Gvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
++|..... ..|. +.--+...++. +.+.|+++ |-+++..-.|+ .+.+.+.+..|+..|..+.+.
T Consensus 165 vcDigeSs-~~~~ve~~Rtl~vLel-~~~wL~~~~~~f~~KVl~pY----~~~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 165 LCDIGESS-SSAEVEEHRTIRVLEM-VEDWLHRGPREFCVKVLCPY----MPKVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp EECCCCCC-SCHHHHHHHHHHHHHH-HHHHHTTCCCEEEEEESCTT----SHHHHHHHHHHHHHHCCEEEC
T ss_pred EEECccCC-CChhhhhhHHHHHHHH-HHHHhccCCCcEEEEEcCCC----ChHHHHHHHHHHHHhCCEeEe
Confidence 99997321 1111 11122335565 57889988 89998875552 244557788899999987644
No 296
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.49 E-value=0.00057 Score=64.02 Aligned_cols=111 Identities=11% Similarity=-0.022 Sum_probs=70.4
Q ss_pred CCeEEEEccchhHHHHHHHhc-----------------CCCcEEEEEECC-----------HHHHHHHHhhhhhccCCCC
Q 022451 103 PKTIFIMGGGEGSTAREILRH-----------------KTVEKVVMCDID-----------EEVVEFCKSYLVVNKEAFS 154 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~a~~~f~~~~~~~~ 154 (297)
+-+|+|+||++|..+..+... .|.-+|...|+- |...+.+++..+ .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 678999999999887655432 244567777776 444443332211 1
Q ss_pred CCCeEEEEcchHHHHhc--cCCCceEEEEcCCCCCCCCCccCccc---------------------------------HH
Q 022451 155 DPRLELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLYT---------------------------------KS 199 (297)
Q Consensus 155 ~~rv~~~~~Da~~~l~~--~~~~yD~Ii~D~~~~~~~~p~~~L~t---------------------------------~e 199 (297)
..+-.++.+.+..|-.. ..+.+|+|++...-+|-...+..+.+ ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12346777777776543 46789999999987774333222221 12
Q ss_pred HHHHHHcccCCCCcEEEEecC
Q 022451 200 FYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 200 f~~~~~~~~L~pgGvl~~~~~ 220 (297)
|++. ..+.|+|||.+++...
T Consensus 207 FL~~-Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 207 FLRI-HSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHH-HHHHEEEEEEEEEEEE
T ss_pred HHHH-HHHHhccCCeEEEEEe
Confidence 3565 5799999999998874
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.49 E-value=0.00011 Score=68.13 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=50.0
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~ 168 (297)
...||+||.|.|.+++.|++.....+|++||+|++.+...++.+ . .++++++.+|+..+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~--~-----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF--E-----GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT--T-----TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc--c-----CCCEEEEECCccch
Confidence 47899999999999999998533468999999999999888765 1 36899999999655
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.48 E-value=0.0002 Score=69.94 Aligned_cols=138 Identities=12% Similarity=0.051 Sum_probs=83.6
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc----CC---------CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH----KT---------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~----~~---------~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~ 166 (297)
.....+|+|-.||+|++...+.++ .. ...+.++|+|+.+..+|+-++-+.+ .+.-++..+|..
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL 290 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSL 290 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTT
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----Cccccccccccc
Confidence 344668999999999998766542 11 2469999999999999998876543 233467788865
Q ss_pred HHH-hc--cCCCceEEEEcCCCCCCCC----------CccCcccHHHHHHHHcccCC-------CCcEEEEecCCCCCcC
Q 022451 167 AEL-ES--RKESYDVIIGDLADPIEGG----------PCYKLYTKSFYEFVVKPRLN-------PEGIFVTQAGPAGIFS 226 (297)
Q Consensus 167 ~~l-~~--~~~~yD~Ii~D~~~~~~~~----------p~~~L~t~ef~~~~~~~~L~-------pgGvl~~~~~~p~~~~ 226 (297)
.+- .. ...+||+|+.++|-..... +...-...-|++. +.+.|+ |||.+++-.. .+...
T Consensus 291 ~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~~~~~l~~gGr~avVlP-~g~Lf 368 (530)
T 3ufb_A 291 RFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQL-IMRKLKRPGHGSDNGGRAAVVVP-NGTLF 368 (530)
T ss_dssp CSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHH-HHHHBCCTTSSSSSCCEEEEEEE-HHHHH
T ss_pred cCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHH-HHHHhhhhhhccCCCceEEEEec-chhhh
Confidence 431 11 2357999999997321000 0001112346666 455554 7998876641 11112
Q ss_pred CchHHHHHHHHHHhhCC
Q 022451 227 HTEVFSCIYNTLRQVFK 243 (297)
Q Consensus 227 ~~~~~~~i~~~l~~~F~ 243 (297)
.......+++.|-+.+.
T Consensus 369 ~~~~~~~iRk~Lle~~~ 385 (530)
T 3ufb_A 369 SDGISARIKEELLKNFN 385 (530)
T ss_dssp CCTHHHHHHHHHHHHSE
T ss_pred ccchHHHHHHHHhhcCE
Confidence 23334556666666554
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.36 E-value=0.0005 Score=63.13 Aligned_cols=76 Identities=22% Similarity=0.282 Sum_probs=60.9
Q ss_pred CCCCeEEEEccchhHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---HhccC--C
Q 022451 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK--E 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---l~~~~--~ 174 (297)
.++..++|..+|.|+.+..+++. .+..+|+++|.||.+++.|+ .+ .++|++++.++..++ +.... +
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~ 127 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIG 127 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCC
Confidence 45678999999999999999986 46789999999999999995 33 247999999987665 33321 3
Q ss_pred CceEEEEcCC
Q 022451 175 SYDVIIGDLA 184 (297)
Q Consensus 175 ~yD~Ii~D~~ 184 (297)
++|.|+.|+-
T Consensus 128 ~vDgILfDLG 137 (347)
T 3tka_A 128 KIDGILLDLG 137 (347)
T ss_dssp CEEEEEEECS
T ss_pred cccEEEECCc
Confidence 6999999984
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.36 E-value=0.00019 Score=66.85 Aligned_cols=71 Identities=10% Similarity=0.069 Sum_probs=55.5
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.++.+|||||++.|+.+..+++. ..+|++||+.|.--. .. .+++|+++.+|++.+... ..++|+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~-l~----------~~~~V~~~~~d~~~~~~~-~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQS-LM----------DTGQVTWLREDGFKFRPT-RSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHH-HH----------TTTCEEEECSCTTTCCCC-SSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChh-hc----------cCCCeEEEeCccccccCC-CCCcCEEE
Confidence 56789999999999999999986 468999997642211 11 358999999999886532 46799999
Q ss_pred EcCCC
Q 022451 181 GDLAD 185 (297)
Q Consensus 181 ~D~~~ 185 (297)
+|...
T Consensus 276 sDm~~ 280 (375)
T 4auk_A 276 CDMVE 280 (375)
T ss_dssp ECCSS
T ss_pred EcCCC
Confidence 99863
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.34 E-value=0.0016 Score=59.92 Aligned_cols=151 Identities=15% Similarity=0.208 Sum_probs=90.1
Q ss_pred CCeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc--CCCceEE
Q 022451 103 PKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYDVI 179 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~--~~~yD~I 179 (297)
+.+|+++.||.|++...+.+.. ....|.++|+|+..++..+.+++ ...++.+|..++.... ...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---------~~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---------HTQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---------ccccccCCHHHccHhHcCcCCcCEE
Confidence 4579999999999998888752 13579999999999999999864 2346778887653211 1269999
Q ss_pred EEcCC-CCCC-CC-------CccCcccHHHHHHHHcccCC--CCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 180 IGDLA-DPIE-GG-------PCYKLYTKSFYEFVVKPRLN--PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 180 i~D~~-~~~~-~~-------p~~~L~t~ef~~~~~~~~L~--pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
+.+++ .+.+ .+ +...| -.++++. + +.++ |.-+++=|+. + ......+..+.+.|.+.-=.+...
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l-~~~~~~~-i-~~~~~~P~~~~~ENV~--~-l~~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNS-FLHILDI-L-PRLQKLPKYILLENVK--G-FEVSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp EECCC------------------CH-HHHHHHH-G-GGCSSCCSEEEEEEET--T-GGGSHHHHHHHHHHHHTTEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchH-HHHHHHH-H-HHhcCCCCEEEEeCCc--c-ccCHHHHHHHHHHHHHCCCeeEEE
Confidence 99987 2221 11 11122 2356664 3 5677 8877765542 2 223456677778776542122221
Q ss_pred EEecCccC----CceeEEEEecCC
Q 022451 249 SAHIPSFA----DTWGWIMVSIYN 268 (297)
Q Consensus 249 ~~~vp~~~----~~~~~~~as~~~ 268 (297)
......|+ ...-|+++.+.+
T Consensus 147 vl~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 147 LLSPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp EECGGGGTCSCCCCEEEEEEEESS
T ss_pred EEEHHHCCCCCcccEEEEEEEeCC
Confidence 11112232 124567777654
No 302
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.15 E-value=0.00056 Score=63.88 Aligned_cols=119 Identities=11% Similarity=0.044 Sum_probs=72.4
Q ss_pred CCCCeEEEEccchhHHHHHHH--------hc-------CCCcEEEEEECCHHHHHHHHhhhhhccCCC--------CCCC
Q 022451 101 PNPKTIFIMGGGEGSTAREIL--------RH-------KTVEKVVMCDIDEEVVEFCKSYLVVNKEAF--------SDPR 157 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~--------~~-------~~~~~v~~VEid~~vi~~a~~~f~~~~~~~--------~~~r 157 (297)
+.+-+|+|+|||+|..+..+. +. .|.-+|..-|+-..-....-+.++.....+ ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 346789999999998876552 11 245677788876655544433333211000 0112
Q ss_pred eEEEEcchHHHHhc--cCCCceEEEEcCCCCCCCCCccCccc--------------------------------HHHHHH
Q 022451 158 LELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLYT--------------------------------KSFYEF 203 (297)
Q Consensus 158 v~~~~~Da~~~l~~--~~~~yD~Ii~D~~~~~~~~p~~~L~t--------------------------------~ef~~~ 203 (297)
-.++.+.+..|-.. +++.+|+|++...-+|-...+..+.+ ..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 24566666655432 46789999999987774332222211 125666
Q ss_pred HHcccCCCCcEEEEecC
Q 022451 204 VVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 204 ~~~~~L~pgGvl~~~~~ 220 (297)
..+.|+|||.+++...
T Consensus 211 -ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 211 -RAAEVKRGGAMFLVCL 226 (374)
T ss_dssp -HHHHEEEEEEEEEEEE
T ss_pred -HHHHhCCCCEEEEEEe
Confidence 6899999999998863
No 303
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.14 E-value=0.00027 Score=57.25 Aligned_cols=64 Identities=16% Similarity=0.097 Sum_probs=44.9
Q ss_pred CCCCeEEEEccchh-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..+.+||+||||.| ..+..|.++. ...|+++|++|..++ ++.+|.++-....-+.||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~-------------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG-------------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT-------------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc-------------------eEEccCCCCcccccCCcCEE
Confidence 45689999999999 5899888743 468999999987765 45556543221111479999
Q ss_pred -EEcCC
Q 022451 180 -IGDLA 184 (297)
Q Consensus 180 -i~D~~ 184 (297)
-+.++
T Consensus 94 YsirPP 99 (153)
T 2k4m_A 94 YSIRPP 99 (153)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 55543
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.11 E-value=0.0099 Score=54.34 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=93.5
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
..++++|.||.|++...+.+. +...+.++|+|+..++..+.+++.. . .+|..++....-..+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhCCCCCEEEEC
Confidence 468999999999999988875 4678899999999999999987521 1 588877654433569999999
Q ss_pred CC-CCCC-CC-------CccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcC--CchHHHHHHHHHHhhCCceeEEEEe
Q 022451 183 LA-DPIE-GG-------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVFSCIYNTLRQVFKYVVPYSAH 251 (297)
Q Consensus 183 ~~-~~~~-~~-------p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~--~~~~~~~i~~~l~~~F~~v~~~~~~ 251 (297)
++ .+.+ ++ +...| -.++++. + +.++|.-+++=|+ ++... ....+..+.+.|.+.-=.+......
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L-~~~~~r~-i-~~~~P~~~~~ENV--~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~ 153 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTL-FFDIARI-V-REKKPKVVFMENV--KNFASHDNGNTLEVVKNTMNELDYSFHAKVLN 153 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCH-HHHHHHH-H-HHHCCSEEEEEEE--GGGGTGGGGHHHHHHHHHHHHTTBCCEEEEEE
T ss_pred CCCCCcchhcccCCCcchhhHH-HHHHHHH-H-HhccCcEEEEeCc--HHHHhccccHHHHHHHHHHHhCCCEEEEEEEE
Confidence 87 2221 11 11123 2466665 4 5679987776664 22121 2346777888887652223322222
Q ss_pred cCccC---C-ceeEEEEecC
Q 022451 252 IPSFA---D-TWGWIMVSIY 267 (297)
Q Consensus 252 vp~~~---~-~~~~~~as~~ 267 (297)
...|+ . ..-|+++.+.
T Consensus 154 a~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 154 ALDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGGGTCSBCCEEEEEEEEBG
T ss_pred HHHcCCCccceEEEEEEEeC
Confidence 23343 1 2456777654
No 305
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.98 E-value=0.00066 Score=63.03 Aligned_cols=115 Identities=11% Similarity=0.055 Sum_probs=78.0
Q ss_pred CCCCeEEEEccchhHHHHHHHh----------------cCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc
Q 022451 101 PNPKTIFIMGGGEGSTAREILR----------------HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND 164 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~----------------~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~D 164 (297)
+.+-+|+|+||++|..+..+.. ..|.-+|...|+-..-...+-+.++... ...+-.++.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~gv 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFINGV 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEec
Confidence 4567899999999975432221 1456788999998888888877765321 11145778888
Q ss_pred hHHHHhc--cCCCceEEEEcCCCCCCCCCccC--------------------cccH-------HHHHHHHcccCCCCcEE
Q 022451 165 ARAELES--RKESYDVIIGDLADPIEGGPCYK--------------------LYTK-------SFYEFVVKPRLNPEGIF 215 (297)
Q Consensus 165 a~~~l~~--~~~~yD~Ii~D~~~~~~~~p~~~--------------------L~t~-------ef~~~~~~~~L~pgGvl 215 (297)
+..|-.. ..+.+|+|++...-+|-...+.. .|.. .|++. ..+.|+|||.+
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~-Ra~EL~pGG~m 205 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC-RAQEVVPGGRM 205 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH-HHHHBCTTCEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCceE
Confidence 7776543 46789999999887764322111 2222 35666 68999999999
Q ss_pred EEec
Q 022451 216 VTQA 219 (297)
Q Consensus 216 ~~~~ 219 (297)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9886
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.95 E-value=0.0014 Score=59.02 Aligned_cols=46 Identities=11% Similarity=0.061 Sum_probs=41.0
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~ 148 (297)
.+...|||++||+|+++.++.+. ..+++++|+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHH
Confidence 56789999999999999999986 36899999999999999998753
No 307
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.77 E-value=0.056 Score=49.43 Aligned_cols=150 Identities=14% Similarity=0.147 Sum_probs=91.1
Q ss_pred CeEEEEccchhHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCceEEE
Q 022451 104 KTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVII 180 (297)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD~Ii 180 (297)
-+++++.||.|++..-+.+.. +...|.++|+|+...+..+.+|+ ...++.+|..+.... ....+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---------~~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---------ETNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---------CCceeccccccCCHHHhccCCCCEEE
Confidence 479999999999988877642 12568899999999999998874 234567787654322 123699999
Q ss_pred EcCC-CCCC--------CCCccCcccHHHHHHHHcccCC-CCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEEEE
Q 022451 181 GDLA-DPIE--------GGPCYKLYTKSFYEFVVKPRLN-PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYSA 250 (297)
Q Consensus 181 ~D~~-~~~~--------~~p~~~L~t~ef~~~~~~~~L~-pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~ 250 (297)
..++ .+.+ ..+...|+ .++++. + +.++ |.-+++=|+ ++ ......+..+.+.|.+.-=.+.....
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r~-i-~~~~~P~~~vlENV--~g-l~~~~~~~~i~~~l~~~GY~v~~~vl 148 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIGI-L-DQLDNVDYILMENV--KG-FENSTVRNLFIDKLKECNFIYQEFLL 148 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHHH-G-GGCTTCCEEEEEEC--TT-GGGSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHHH-H-HHhcCCCEEEEecc--hh-hhhhhHHHHHHHHHHhCCCeEEEEEe
Confidence 9887 2221 11212343 466665 4 5665 987776664 22 22344567777777764222222222
Q ss_pred ecCccC----CceeEEEEecCC
Q 022451 251 HIPSFA----DTWGWIMVSIYN 268 (297)
Q Consensus 251 ~vp~~~----~~~~~~~as~~~ 268 (297)
....|+ ...-|++|++.+
T Consensus 149 ~a~~~GvPQ~R~R~fiva~r~~ 170 (333)
T 4h0n_A 149 CPSTVGVPNSRLRYYCTARRNN 170 (333)
T ss_dssp CTTTTTCSCCCCEEEEEEEETT
T ss_pred cHHHcCCCccceEEEEEEEeCC
Confidence 222343 124577787765
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.65 E-value=0.047 Score=49.84 Aligned_cols=151 Identities=17% Similarity=0.228 Sum_probs=88.2
Q ss_pred CCCeEEEEccchhHHHHHHHhcC-CCcEE-EEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCce
Q 022451 102 NPKTIFIMGGGEGSTAREILRHK-TVEKV-VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v-~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~yD 177 (297)
.+-+++++.||.|++..-+.+.. +...+ .++|+|+...+..+.+|+.. ++.+|.++.... ....+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45689999999999988877642 23567 79999999999999987521 345565443211 113699
Q ss_pred EEEEcCC-CCC--C--------CCCccCcccHHHHH-HHHcccC--CCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCC
Q 022451 178 VIIGDLA-DPI--E--------GGPCYKLYTKSFYE-FVVKPRL--NPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (297)
Q Consensus 178 ~Ii~D~~-~~~--~--------~~p~~~L~t~ef~~-~~~~~~L--~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~ 243 (297)
+|+..++ .+. + ..+...| -.++++ . + +.+ +|.-+++=|+ ++ ......+..+.+.|.+..=
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L-~~~~~r~~-i-~~~~~~P~~~~lENV--~g-l~~~~~~~~i~~~l~~~GY 152 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKS-VLHLYRDI-L-PYLINKPKHIFIENV--PL-FKESLVFKEIYNILIKNQY 152 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHH-HHHHHHTT-G-GGCSSCCSEEEEEEC--GG-GGGSHHHHHHHHHHHHTTC
T ss_pred EEEecCCccCcccccCCCCCCCccccchh-HHHHHHHH-H-HHhccCCCEEEEEch--hh-hcChHHHHHHHHHHHhCCC
Confidence 9999887 233 1 0111112 124444 3 2 455 6877666554 22 2234567778888876532
Q ss_pred ceeEEEEecCccC----CceeEEEEecCC
Q 022451 244 YVVPYSAHIPSFA----DTWGWIMVSIYN 268 (297)
Q Consensus 244 ~v~~~~~~vp~~~----~~~~~~~as~~~ 268 (297)
.+.........|+ ...-|+++++.+
T Consensus 153 ~v~~~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 153 YIKDIICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EEEEEEECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEEEEEEeHHHcCCCccceEEEEEEEeCC
Confidence 2332222222342 124567777664
No 309
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.57 E-value=0.0042 Score=57.95 Aligned_cols=122 Identities=19% Similarity=0.215 Sum_probs=80.2
Q ss_pred CeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-------cCCCc
Q 022451 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-------RKESY 176 (297)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-------~~~~y 176 (297)
-+|++|.||.|++...+.+. +...+.+||+|+..++..+.++ +...++.+|..+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~---------~~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF---------PRSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC---------TTSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC---------CCCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999888775 4667889999999999998875 3456788887664221 23679
Q ss_pred eEEEEcCC-CCCC-CCC------ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcC--CchHHHHHHHHHHhh
Q 022451 177 DVIIGDLA-DPIE-GGP------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVFSCIYNTLRQV 241 (297)
Q Consensus 177 D~Ii~D~~-~~~~-~~p------~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~--~~~~~~~i~~~l~~~ 241 (297)
|+|+.+++ .+.+ .+. ...| ..+|++. + +.++|.-+++=|+. +... ....+..+. .|.+.
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L-~~~~~~~-v-~~~~P~~~v~ENV~--gl~s~~~~~~~~~i~-~l~~~ 141 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQL-YMHFYRL-V-SELQPLFFLAENVP--GIMQEKYSGIRNKAF-NLVSG 141 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHH-HHHHHHH-H-HHHCCSEEEEEECT--TTTCGGGHHHHHHHH-HHHHT
T ss_pred eEEEecCCCCCcccccCCCCCCchHHH-HHHHHHH-H-HHhCCCEEEEecch--HhhccCcHHHHHHHH-HHHcC
Confidence 99999987 2221 111 0122 2356665 3 57899887776652 2121 233566666 66654
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.50 E-value=0.032 Score=51.06 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=67.0
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-----cchHHHHhc--
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-- 171 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-----~Da~~~l~~-- 171 (297)
..++++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. .. .-+.... .|..+.+..
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHh
Confidence 45678999999865 66778888876665699999999999999986 21 1122221 233333433
Q ss_pred cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
....+|+|+-... . ...++. +.+.|+++|.++.-.
T Consensus 249 ~g~g~Dvvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALECTG-----V-------ESSIAA-AIWAVKFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECC
T ss_pred CCCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEc
Confidence 2457999985432 1 135666 678999999998654
No 311
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.39 E-value=0.05 Score=48.01 Aligned_cols=108 Identities=19% Similarity=0.149 Sum_probs=71.7
Q ss_pred CCCCeEEEEccchhHHHHHHHhc-------CCCcEEEEEE-----CCHH-----------------------HHHHH--H
Q 022451 101 PNPKTIFIMGGGEGSTAREILRH-------KTVEKVVMCD-----IDEE-----------------------VVEFC--K 143 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-------~~~~~v~~VE-----id~~-----------------------vi~~a--~ 143 (297)
.-|..|+++|+-.|..+..++.. .+..+|.+.| ..+. +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 56899999999988877664431 2457899998 3210 11111 1
Q ss_pred hhhhhccCCCCCCCeEEEEcchHHHHhc-----cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 144 SYLVVNKEAFSDPRLELVINDARAELES-----RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 144 ~~f~~~~~~~~~~rv~~~~~Da~~~l~~-----~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+++... ...+++++++.|++.+.|.. ...++|+|.+|.-. .--+...|+. +..+|+|||++++-
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--------Y~~t~~~le~-~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--------YEPTKAVLEA-IRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--------HHHHHHHHHH-HGGGEEEEEEEEES
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--------cchHHHHHHH-HHHHhCCCcEEEEc
Confidence 111111 11247899999999888754 23579999999721 1125578888 78999999999986
Q ss_pred c
Q 022451 219 A 219 (297)
Q Consensus 219 ~ 219 (297)
-
T Consensus 217 D 217 (257)
T 3tos_A 217 E 217 (257)
T ss_dssp S
T ss_pred C
Confidence 4
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.36 E-value=0.0085 Score=54.48 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=66.6
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.-. . .-+.....|..+.+......+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-~------~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGA-E------VAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTC-S------EEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHcCC-C------EEEeCCCcCHHHHHHHhCCCCCEE
Confidence 5678999999875 778888888765 499999999999999987421 1 001111134444454433479999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.... . .+.++. +.+.|+++|.++...
T Consensus 237 id~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAV-----S-------PKAFSQ-AIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEeCC-----C-------HHHHHH-HHHHhccCCEEEEeC
Confidence 86542 1 245666 678999999997653
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.36 E-value=0.059 Score=49.25 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=64.0
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE------cchHHHHhc-
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES- 171 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~------~Da~~~l~~- 171 (297)
..+..+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. +. . .++. .|..+.+..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-------~--~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-GA-------D--LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC-------S--EEEECSSCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CC-------C--EEEcCcccccchHHHHHHHH
Confidence 35678999999875 67777888776555899999999999998864 21 1 1221 122222322
Q ss_pred cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 172 ~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+.+|+|+-... . ...++. +.+.|+++|.++.-.
T Consensus 239 ~~~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 LGCKPEVTIECTG-----A-------EASIQA-GIYATRSGGTLVLVG 273 (356)
T ss_dssp HTSCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECS
T ss_pred hCCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEe
Confidence 2256999985432 1 134556 578999999997653
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.24 E-value=0.0078 Score=55.48 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=64.7
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceE
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~ 178 (297)
.+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ..+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GAT------HVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCC------EEecCCccCHHHHHHHhcCCCCcE
Confidence 5678999999876 67777888766555899999999999999874 211 0011111233333433 2337999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+-... . .+.++. +.+.|+++|.+++-.
T Consensus 262 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG-----S-------PEILKQ-GVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC-----C-------HHHHHH-HHHTEEEEEEEEECC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEeC
Confidence 985432 1 145666 678999999997653
No 315
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.18 E-value=0.058 Score=48.66 Aligned_cols=148 Identities=12% Similarity=0.104 Sum_probs=92.1
Q ss_pred eEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEcCC
Q 022451 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (297)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~ 184 (297)
+|++|-||.|++..-+.+. +..-+.++|+|+...+.-+.+++ -+++.+|..+.-...-.+.|+|+..++
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHS----------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 6899999999988777664 46678899999999999888763 156789987654333357999998876
Q ss_pred -CCCC--------CCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCc--CCchHHHHHHHHHHhhCCceeEEEEecC
Q 022451 185 -DPIE--------GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF--SHTEVFSCIYNTLRQVFKYVVPYSAHIP 253 (297)
Q Consensus 185 -~~~~--------~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~--~~~~~~~~i~~~l~~~F~~v~~~~~~vp 253 (297)
.+++ ..+...| -.++++. -+.++|.-+++=|+ ++.. ...+.+..+++.|.+..=.+........
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L-~~~~~r~--i~~~~Pk~~~~ENV--~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~ 145 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKL-FYEYIRI--LKQKKPIFFLAENV--KGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNAN 145 (331)
T ss_dssp GGGTEETTEECCTTCGGGHH-HHHHHHH--HHHHCCSEEEEEEC--CGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGG
T ss_pred CCCcCCCCCccCCCCchhHH-HHHHHHH--HhccCCeEEEeeee--cccccccccchhhhhhhhhccCCcEEEEEecccc
Confidence 2221 1111123 2356664 35789987776564 2211 2345777888888765322333323333
Q ss_pred ccC---Cc-eeEEEEecCC
Q 022451 254 SFA---DT-WGWIMVSIYN 268 (297)
Q Consensus 254 ~~~---~~-~~~~~as~~~ 268 (297)
.|+ .+ .-|+++.+.+
T Consensus 146 ~yGvPQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 146 DYGVAQDRKRVFYIGFRKE 164 (331)
T ss_dssp GTTCSBCCEEEEEEEEEGG
T ss_pred cCCCCcccceEEEEEEcCC
Confidence 343 22 3467777643
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.12 E-value=0.015 Score=53.23 Aligned_cols=100 Identities=9% Similarity=0.070 Sum_probs=65.2
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCc
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~y 176 (297)
..++.+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.- .. .-+.....|..+.+.. . ...+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG-a~------~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYG-AT------DIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHT-CC------EEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhC-Cc------eEEcCCCcCHHHHHHHHcCCCCC
Confidence 35678999999875 667788888766558999999999999998752 11 0001111344444433 2 3469
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-... .+ +.++. +.+.|+++|.++.-.
T Consensus 237 D~v~d~~g-----~~-------~~~~~-~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 237 DKVVIAGG-----DV-------HTFAQ-AVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEECSS-----CT-------THHHH-HHHHEEEEEEEEECC
T ss_pred CEEEECCC-----Ch-------HHHHH-HHHHHhcCCEEEEec
Confidence 99985432 11 34555 578999999987653
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.11 E-value=0.016 Score=53.43 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=67.2
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc----cCC
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES----RKE 174 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~----~~~ 174 (297)
..+.++||++|+|+ |.++.++++..+..+|++++.+++-.+++++. +... -+.....|..+.+.. ..+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~------vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GATA------TVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCSE------EECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCCE------EECCCCcCHHHHHHhhhhccCC
Confidence 45678999999865 66778888877666999999999999999874 2110 011112344455543 234
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|+|+-... . .+.++. +.+.|+++|.+++-.
T Consensus 253 g~Dvvid~~G-----~-------~~~~~~-~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECAG-----V-------AETVKQ-STRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred CCCEEEECCC-----C-------HHHHHH-HHHHhccCCEEEEEe
Confidence 7999985431 1 145666 678999999998754
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.97 E-value=0.014 Score=51.34 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=41.4
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~ 148 (297)
..+...|||..||+|+++.++.+. ..+++++|+++..++.|++++..
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHh
Confidence 356788999999999999999986 47899999999999999998753
No 319
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.84 E-value=0.018 Score=52.37 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=65.5
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
..+.++||++|+|+ |..+.++++..+..+|+++|.+++-.+.+++. +.. .+--...|..+.+.. ....+
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-Ga~-------~~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-GAD-------AAVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-TCS-------EEEECSTTHHHHHHHHHGGGCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCC-------EEEcCCCcHHHHHHHHhCCCCC
Confidence 35678999999865 66777777765567999999999999999874 211 111111233333332 23479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-... . .+.++. +.+.|+++|.++.-.
T Consensus 241 d~v~d~~G-----~-------~~~~~~-~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVG-----A-------QSTIDT-AQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred eEEEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEC
Confidence 99885432 1 145666 678999999998653
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.73 E-value=0.029 Score=52.16 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=65.6
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhc-c-CCC
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES-R-KES 175 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da-~~~l~~-~-~~~ 175 (297)
..+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.++++ +.. -+.....|. .+.+.. . ...
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~-------~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GFE-------TIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TCE-------EEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCc-------EEcCCCcchHHHHHHHHhCCCC
Confidence 35678999999876 77788888866555899999999999998864 211 011111232 333332 2 236
Q ss_pred ceEEEEcCCCCCCCC-C-ccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 176 YDVIIGDLADPIEGG-P-CYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~-p-~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|+||-....+.... + ..++-....++. +.+.|+++|.+++-
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNS-LFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHH-HHHHEEEEEEEECC
T ss_pred CCEEEECCCCccccccccccccccHHHHHH-HHHHHhcCCEEEEe
Confidence 999985543211000 0 000011235666 67899999998754
No 321
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.66 E-value=0.048 Score=50.27 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=64.7
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-cCCCc
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~--~~Da~~~l~~-~~~~y 176 (297)
.+..+||++|+|+ |.++.++++..+..+|+++|.+++-.+.|++. +.. .-+... ..|..+.++. ..+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-GVN------EFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-TCC------EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc------EEEccccCchhHHHHHHHhcCCCC
Confidence 5678999999864 66777777766656899999999999999874 211 000000 1234444433 33479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
|+|+-... . .+.++. +.+.|+++ |.+++-.
T Consensus 265 D~vid~~g-----~-------~~~~~~-~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG-----N-------VSVMRA-ALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----C-------HHHHHH-HHHHhhccCCEEEEEc
Confidence 99985432 1 245666 67899997 9987653
No 322
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.65 E-value=0.043 Score=49.73 Aligned_cols=100 Identities=17% Similarity=0.117 Sum_probs=65.3
Q ss_pred CCCCCeEEEEccchh-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc--CCCc
Q 022451 100 HPNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~--~~~y 176 (297)
..+..+||++|+|++ .++..+++.....+|++++.+++-.+++++.-.. .-+.....|..+.+... ...+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------VTINSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------EEEEC-CCCHHHHHHHHTTSSCE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------EEEeCCCCCHHHHhhhhcCCCCc
Confidence 356789999999864 4455556544568999999999988888875321 11223334555555442 3457
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|.++.+... .+.+.. ..+.|+++|.+++..
T Consensus 234 d~~~~~~~~------------~~~~~~-~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 234 QSAIVCAVA------------RIAFEQ-AVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEECCSC------------HHHHHH-HHHTEEEEEEEEECC
T ss_pred eEEEEeccC------------cchhhe-eheeecCCceEEEEe
Confidence 888876431 144555 578999999987654
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.58 E-value=0.074 Score=48.99 Aligned_cols=95 Identities=20% Similarity=0.253 Sum_probs=61.1
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..+..+||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++. +.. .++..+-.+++......+|+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~~g~Dv 260 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GAD---------EVVNSRNADEMAAHLKSFDF 260 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TCS---------EEEETTCHHHHHTTTTCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEeccccHHHHHHhhcCCCE
Confidence 35678999999875 667777787654 4799999999999988873 311 11211112333332357999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+-.... + ..++. +.+.|+++|.++.-
T Consensus 261 vid~~g~-----~-------~~~~~-~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAA-----P-------HNLDD-FTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSS-----C-------CCHHH-HHTTEEEEEEEEEC
T ss_pred EEECCCC-----H-------HHHHH-HHHHhccCCEEEEe
Confidence 9854432 1 11344 56899999998764
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.52 E-value=0.071 Score=48.54 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=62.6
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhc-c----
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-R---- 172 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-~Da~~~l~~-~---- 172 (297)
..+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.- .. .-+.... .|..+.+.. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lG-a~------~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCG-AD------VTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTT-CS------EEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHhC-CC------EEEcCcccccHHHHHHHHhcccc
Confidence 35678999999864 666777777664 46999999999999998642 11 0011110 233333322 1
Q ss_pred CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+.+|+|+-.... ...++. +.+.|+++|.++.-.
T Consensus 238 g~g~D~vid~~g~------------~~~~~~-~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSGN------------EKCITI-GINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSCC------------HHHHHH-HHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC------------HHHHHH-HHHHHhcCCEEEEEe
Confidence 3569999854321 134556 578999999987653
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.45 E-value=0.078 Score=48.69 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=63.1
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE----cchHHHHhc-cCC
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI----NDARAELES-RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~----~Da~~~l~~-~~~ 174 (297)
.+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. +.. .+ +-. .|..+.+.. ..+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~-------~v-i~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GAT-------DF-VNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCC-------EE-ECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CCc-------eE-EeccccchhHHHHHHHHhCC
Confidence 4578999999764 66677777766555899999999999998864 211 00 101 133333332 224
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
.+|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 262 g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 262 GVDFSLECVG-----N-------VGVMRN-ALESCLKGWGVSVLVG 294 (374)
T ss_dssp CBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CCCEEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEEc
Confidence 7999985432 1 144566 67899999 9987653
No 326
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.37 E-value=0.16 Score=48.81 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=83.8
Q ss_pred CCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh------------
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE------------ 170 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~------------ 170 (297)
.-++++|-||.|++..-+.+. +...|.++|+|+...+.-+.+|.. .|...++.+|.+++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 458999999999998887764 456689999999999998887742 2455678899988752
Q ss_pred ----ccCCCceEEEEcCC-CCCC-CC----------------CccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcC--
Q 022451 171 ----SRKESYDVIIGDLA-DPIE-GG----------------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS-- 226 (297)
Q Consensus 171 ----~~~~~yD~Ii~D~~-~~~~-~~----------------p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~-- 226 (297)
.....+|+|+..++ .+++ .+ +...| -.++++. + +.++|.-+++=|+ ++...
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~L-f~e~~ri-I-~~~rPk~fvlENV--~gl~s~~ 235 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTL-FFDVVRI-I-DARRPAMFVLENV--KNLKSHD 235 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSH-HHHHHHH-H-HHHCCSEEEEEEE--TTTTTGG
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccH-HHHHHHH-H-HHcCCcEEEEeCc--HHHhccc
Confidence 12246899999887 2221 11 11122 2355554 3 5678987776665 22222
Q ss_pred CchHHHHHHHHHHhh
Q 022451 227 HTEVFSCIYNTLRQV 241 (297)
Q Consensus 227 ~~~~~~~i~~~l~~~ 241 (297)
....+..+++.|.+.
T Consensus 236 ~g~~f~~i~~~L~~l 250 (482)
T 3me5_A 236 KGKTFRIIMQTLDEL 250 (482)
T ss_dssp GGHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHhcC
Confidence 245677788887754
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.36 E-value=0.087 Score=48.37 Aligned_cols=96 Identities=9% Similarity=-0.016 Sum_probs=63.1
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-----cchHHHHhc-cC
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-----~Da~~~l~~-~~ 173 (297)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. +.. .++. .|..+.+.. ..
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GAT---------ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCc---------EEEecccccchHHHHHHHHhC
Confidence 4578999999764 56677777765555899999999999998864 211 1111 233344432 23
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
+.+|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 260 gg~Dvvid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG-----R-------IETMMN-ALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC-----C-------HHHHHH-HHHHHhcCCCEEEEEc
Confidence 47999985432 1 145566 67899999 9987653
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.36 E-value=0.099 Score=48.05 Aligned_cols=99 Identities=12% Similarity=0.019 Sum_probs=63.1
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-cCCCc
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~--~~Da~~~l~~-~~~~y 176 (297)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. +... -+... ..|..+.+.. ....+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~------vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-GATD------CLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCSE------EECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCcE------EEccccccchHHHHHHHHhCCCc
Confidence 4578999999764 56677778776655899999999999998864 2110 00000 0233333432 23479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
|+|+-... . .+.++. +.+.|+++ |.+++-.
T Consensus 267 Dvvid~~G-----~-------~~~~~~-~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSLDCAG-----T-------AQTLKA-AVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEEESSC-----C-------HHHHHH-HHHTBCTTTCEEEECC
T ss_pred cEEEECCC-----C-------HHHHHH-HHHHhhcCCCEEEEEC
Confidence 99985432 1 145566 67899999 9987643
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.30 E-value=0.1 Score=48.39 Aligned_cols=110 Identities=12% Similarity=0.143 Sum_probs=66.0
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc-hHHHHhc--cCCC
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND-ARAELES--RKES 175 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~D-a~~~l~~--~~~~ 175 (297)
..+.++||++|+|+ |.++.++++..+..+|+++|.+++-++.+++. +.. .+.....| ..+.+.. ....
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~-------~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GFE-------IADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCE-------EEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CCc-------EEccCCcchHHHHHHHHhCCCC
Confidence 35678999999865 67788888876666899999999999999874 210 01100112 2333432 2346
Q ss_pred ceEEEEcCCCCCCCCC---ccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 176 YDVIIGDLADPIEGGP---CYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p---~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|+||-....+..... .......+.++. +.+.|+++|.+++-
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNS-LMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHH-HHHHEEEEEEEEEC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHH-HHHHHhcCCEEEEe
Confidence 9999865432210000 000111235666 67899999998764
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.27 E-value=0.098 Score=48.02 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=63.0
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-----cchHHHHhc-cC
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-----~Da~~~l~~-~~ 173 (297)
.+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. +.. .++. .|..+.+.. ..
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT---------ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc---------eEecccccchhHHHHHHHHhC
Confidence 4578999999765 66677777766555899999999999998864 211 1111 233333432 23
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
..+|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 260 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIG-----R-------LDTMVT-ALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEec
Confidence 47999985432 1 144566 57899999 9987653
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.20 E-value=0.1 Score=47.83 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=62.9
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-----cchHHHHhc-cC
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-----~Da~~~l~~-~~ 173 (297)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. +.. .++. .|..+.+.. ..
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GAT---------ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc---------eEeccccccccHHHHHHHHhC
Confidence 4578999999764 56677777765555899999999999998864 211 1111 233344433 23
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCC-cEEEEec
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gvl~~~~ 219 (297)
..+|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 259 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIG-----N-------VKVMRA-ALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC-----c-------HHHHHH-HHHhhccCCcEEEEEe
Confidence 47999985432 1 144566 67899999 9987653
No 332
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.17 E-value=0.056 Score=49.19 Aligned_cols=91 Identities=18% Similarity=0.094 Sum_probs=61.6
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..++++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. +. . .++ .|. +.+. +.+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga-------~--~v~-~~~-~~~~---~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-GV-------K--HFY-TDP-KQCK---EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-TC-------S--EEE-SSG-GGCC---SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-CC-------C--eec-CCH-HHHh---cCCCE
Confidence 35678999999875 667788888765 4899999999999998873 21 1 122 342 2222 27999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+-....+ +.++. +.+.|+++|.++.-.
T Consensus 238 vid~~g~~------------~~~~~-~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPTH------------YDLKD-YLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCSC------------CCHHH-HHTTEEEEEEEEECC
T ss_pred EEECCCcH------------HHHHH-HHHHHhcCCEEEEEC
Confidence 98543321 12344 578999999998653
No 333
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.12 E-value=0.22 Score=45.82 Aligned_cols=100 Identities=20% Similarity=0.305 Sum_probs=57.8
Q ss_pred CCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.+++||++|+|+-+ .+..+++..+. +|+++|.+++-.+.+++.+.. .+..+..+...+.+. -..+|+||
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETA-VAEADLLI 235 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHH-HHTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHH-HcCCCEEE
Confidence 46899999986333 34444444444 899999999988887765432 122232222122111 12589998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.....+. .+...+.+.+ ..+.++++|+++--
T Consensus 236 ~~~~~~~--~~~~~li~~~-----~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 236 GAVLVPG--RRAPILVPAS-----LVEQMRTGSVIVDV 266 (361)
T ss_dssp ECCCCTT--SSCCCCBCHH-----HHTTSCTTCEEEET
T ss_pred ECCCcCC--CCCCeecCHH-----HHhhCCCCCEEEEE
Confidence 7665433 1122444433 34678899987643
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.10 E-value=0.08 Score=48.51 Aligned_cols=94 Identities=11% Similarity=0.085 Sum_probs=61.9
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhc--cCC
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES--RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~---~Da~~~l~~--~~~ 174 (297)
.+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. +.. .++. .|..+.+.. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFAL-GAD---------HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHc-CCC---------EEEcCCcccHHHHHHHHhCCC
Confidence 4678999999775 666777777665 5899999999999998874 211 1111 233333432 234
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|+|+-... . +.++. +.+.|+++|.++.-.
T Consensus 257 g~D~vid~~g------~-------~~~~~-~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG------G-------AGLGQ-SLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT------S-------SCHHH-HHHHEEEEEEEEEEC
T ss_pred CceEEEECCC------h-------HHHHH-HHHHhhcCCEEEEEe
Confidence 7999986542 1 11344 567899999988654
No 335
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.10 E-value=0.028 Score=51.45 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=59.4
Q ss_pred CeEEEEccch-hHHH-HHHH-hcCCCcEEEEEECCHH---HHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 104 KTIFIMGGGE-GSTA-REIL-RHKTVEKVVMCDIDEE---VVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 104 ~~VL~iG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
++||++|+|+ |.++ .+++ +..+..+|++++.+++ -.+.+++. +.. .+.....|..+ +....+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga~-------~v~~~~~~~~~-i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-DAT-------YVDSRQTPVED-VPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-TCE-------EEETTTSCGGG-HHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-CCc-------ccCCCccCHHH-HHHhCCCCC
Confidence 8999999753 6667 7888 7665556999999988 78888764 211 11000123333 322123799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|+-... . ...++. +.+.|+++|.++.-.
T Consensus 245 vvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIYEATG-----F-------PKHAIQ-SVQALAPNGVGALLG 273 (357)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----C-------hHHHHH-HHHHHhcCCEEEEEe
Confidence 9984432 1 134566 678999999987653
No 336
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.09 E-value=0.018 Score=50.64 Aligned_cols=62 Identities=11% Similarity=0.092 Sum_probs=42.8
Q ss_pred CeEEEEcchHHHHhcc-CCCceEEEEcCCCCCCCCCccCc--------ccHHHHHHHHcccCCCCcEEEEec
Q 022451 157 RLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKL--------YTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 157 rv~~~~~Da~~~l~~~-~~~yD~Ii~D~~~~~~~~p~~~L--------~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+++.+|+.++|+.. ++++|+|+.|+|-.........+ +..++++. +.++|+|+|.++++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~-~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDK-VLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHH-HHHHhcCCeEEEEEc
Confidence 4568999999998763 46899999999732210000011 23456777 689999999999874
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.96 E-value=0.042 Score=51.26 Aligned_cols=101 Identities=16% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCce
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~yD 177 (297)
.+..+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-... . +.....|..+.+.. . ...+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--v-----i~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH--V-----IDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE--E-----ECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE--E-----EcCCCCCHHHHHHHHhCCCCCC
Confidence 4578999999864 566777787766669999999999999998752110 0 00001344444433 2 34699
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHH---HHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEF---VVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~---~~~~~L~pgGvl~~~~ 219 (297)
+|+-.... + ...++. ++.+.++++|.++.-.
T Consensus 285 ~vid~~g~-----~------~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGV-----P------QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSC-----H------HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCC-----c------HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99854321 1 012333 0234449999998754
No 338
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.89 E-value=0.041 Score=49.71 Aligned_cols=98 Identities=23% Similarity=0.226 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCc
Q 022451 100 HPNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~y 176 (297)
..+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+.+.++.. .-+.....|..+.+.. ..+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGFD------GAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCS------EEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCC------EEEECCCHHHHHHHHHhcCCCc
Confidence 356789999997 45667777777654 49999999999888883333211 0011111333444432 34579
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+|+-... . +.++. +.+.|+++|.++.-
T Consensus 220 d~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 220 DVFFDNVG------G-------EILDT-VLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEESSC------H-------HHHHH-HHTTEEEEEEEEEC
T ss_pred eEEEECCC------c-------chHHH-HHHHHhhCCEEEEE
Confidence 99886432 1 34566 67899999998764
No 339
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.82 E-value=0.027 Score=51.16 Aligned_cols=66 Identities=24% Similarity=0.331 Sum_probs=45.9
Q ss_pred CCCCeEEEEcchHHHHhc-cCCCceEEEEcCCCCCCCC-CccC-------cccHHHHHHHHcccCCCCcEEEEecC
Q 022451 154 SDPRLELVINDARAELES-RKESYDVIIGDLADPIEGG-PCYK-------LYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 154 ~~~rv~~~~~Da~~~l~~-~~~~yD~Ii~D~~~~~~~~-p~~~-------L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
...+.+++.+|+.+.++. .++++|+|++|+|-..... .-.. -+-.+.++. ++++|+|||.++++.+
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~-~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKV-VNKKLKPDGSFVVDFG 85 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHH-HHHHCcCCcEEEEEEC
Confidence 346789999999998875 3568999999997321100 0000 023456777 6899999999999864
No 340
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.76 E-value=0.043 Score=45.49 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=58.6
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~y 176 (297)
.+.++||+.|+ |.|..+.++++..+ .+|++++.+++..+.+++. +. +..+.....|..+.+.. . ...+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 45788999994 44555555555443 5899999999988877653 11 00011111233333322 1 2469
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+... ++ +.++. +.+.|+++|.++.-.
T Consensus 109 D~vi~~~------g~-------~~~~~-~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSL------AG-------EAIQR-GVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECC------CT-------HHHHH-HHHTEEEEEEEEECS
T ss_pred eEEEECC------ch-------HHHHH-HHHHhccCCEEEEEc
Confidence 9999653 11 34566 678999999987653
No 341
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.75 E-value=0.11 Score=48.03 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=61.6
Q ss_pred CCCCeEEEEccc-hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE------cchHHHHhc-c
Q 022451 101 PNPKTIFIMGGG-EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES-R 172 (297)
Q Consensus 101 ~~~~~VL~iG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~------~Da~~~l~~-~ 172 (297)
.+.++||++|+| .|..+.++++..+..+|++++.+++-.+.+++. +.. .++. .|..+.+.. .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GAD---------LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TCS---------EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CCc---------EEEeccccCcchHHHHHHHHh
Confidence 456899999965 356677777766546999999999999998864 211 1221 233333333 2
Q ss_pred -CCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 -KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 -~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...+|+|+-.... + +.++. +.+.|+++|.++.-.
T Consensus 264 ~g~g~Dvvid~~g~-----~-------~~~~~-~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD-----S-------RALLE-GSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC-----T-------THHHH-HHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC-----H-------HHHHH-HHHHHhcCCEEEEEe
Confidence 2369999854321 1 23455 568899999987653
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.70 E-value=0.17 Score=45.60 Aligned_cols=100 Identities=16% Similarity=0.125 Sum_probs=64.2
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
..++++||+.|+|+ |.++.++++..+...+++++.+++-.++|+++-. . .-+.....|..+.++. ....+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-~------~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-M------QTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-S------EEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-e------EEEeCCCCCHHHHHHhhcccCCc
Confidence 45678999999875 4456777777777788999999999999988521 1 0111112333333322 23457
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-... . .+.++. +.+.|+++|.+++..
T Consensus 231 d~v~d~~G-----~-------~~~~~~-~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 231 QLILETAG-----V-------PQTVEL-AVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEEECSC-----S-------HHHHHH-HHHHCCTTCEEEECC
T ss_pred cccccccc-----c-------cchhhh-hhheecCCeEEEEEe
Confidence 87764431 1 145666 578999999998764
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.63 E-value=0.035 Score=50.44 Aligned_cols=99 Identities=17% Similarity=0.188 Sum_probs=61.7
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. +... .. +.+ ..|..+.+......+|+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~~-~~-d~~----~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GADL-VV-NPL----KEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TCSE-EE-CTT----TSCHHHHHHHHHSSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CCCE-Ee-cCC----CccHHHHHHHHhCCCCE
Confidence 35678999999853 666777777654 5899999999999988863 2110 00 000 12333333221147999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+.... .+ +.++. +.+.|+++|.++.-.
T Consensus 234 vid~~g-----~~-------~~~~~-~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAV-----SK-------PAFQS-AYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSC-----CH-------HHHHH-HHHHEEEEEEEEECC
T ss_pred EEECCC-----CH-------HHHHH-HHHHhhcCCEEEEec
Confidence 986542 11 34555 568899999887653
No 344
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.59 E-value=0.19 Score=39.27 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=59.7
Q ss_pred CCeEEEEccch-hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcc-CCCce
Q 022451 103 PKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (297)
Q Consensus 103 ~~~VL~iG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~-~~~yD 177 (297)
..+|+++|+|. |. +++.+.+. ..+|+++|.|++.++.+++ ..+.++.+|+.+ .+... -..+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~-----------~g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE-----------RGVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH-----------TTCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH-----------cCCCEEECCCCCHHHHHhcCcccCC
Confidence 46899999984 33 34444443 3589999999999887775 235678888743 34432 25799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++..++.. .. ...-. ..+.+.|+..++...
T Consensus 74 ~vi~~~~~~~--------~n-~~~~~-~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 74 WLILTIPNGY--------EA-GEIVA-SARAKNPDIEIIARA 105 (140)
T ss_dssp EEEECCSCHH--------HH-HHHHH-HHHHHCSSSEEEEEE
T ss_pred EEEEECCChH--------HH-HHHHH-HHHHHCCCCeEEEEE
Confidence 9998765321 01 11222 346678888777654
No 345
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.55 E-value=0.099 Score=47.97 Aligned_cols=96 Identities=23% Similarity=0.281 Sum_probs=62.1
Q ss_pred CCCeEEEEc-c-chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceE
Q 022451 102 NPKTIFIMG-G-GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG-~-G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~ 178 (297)
+.++||++| + |.|.++.++++.....+|++++.+++-.+.+++. +... .+ +. ..|..+.+.. ..+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi-~~-----~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VI-DH-----SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EE-CT-----TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EE-eC-----CCCHHHHHHHhcCCCceE
Confidence 457899998 3 4567778888753357999999999999998874 2110 00 01 1233344433 3357998
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+-... ..+.++. +.++|+++|.++.-
T Consensus 243 vid~~g------------~~~~~~~-~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------------TDKHAAE-IADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------------HHHHHHH-HHHHSCTTCEEEEC
T ss_pred EEECCC------------chhhHHH-HHHHhcCCCEEEEE
Confidence 875431 1145666 67899999999865
No 346
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.53 E-value=0.083 Score=42.95 Aligned_cols=106 Identities=16% Similarity=0.251 Sum_probs=69.6
Q ss_pred hcCCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcc----C
Q 022451 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----K 173 (297)
Q Consensus 98 ~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~----~ 173 (297)
....-+..||+||.|.|-+=..+.+..|..+|.++|--- +-| +.. --|.-.++.+|+++.+... .
T Consensus 36 ~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~------~~h---p~~--~P~~e~~ilGdi~~tL~~~~~r~g 104 (174)
T 3iht_A 36 QTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAV------ASH---PDS--TPPEAQLILGDIRETLPATLERFG 104 (174)
T ss_dssp HTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSC------CCC---GGG--CCCGGGEEESCHHHHHHHHHHHHC
T ss_pred HhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeee------ccC---CCC--CCchHheecccHHHHHHHHHHhcC
Confidence 344567889999999999999999988999999999731 111 111 1244579999999988763 3
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
.+.-++=.|.-... +.....+...+.-.+..+|.|||+++-
T Consensus 105 ~~a~LaHaD~G~g~---~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 105 ATASLVHADLGGHN---REKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp SCEEEEEECCCCSC---HHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CceEEEEeecCCCC---cchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 44555555654322 111222333333336799999998864
No 347
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.51 E-value=0.46 Score=42.74 Aligned_cols=91 Identities=16% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhccCCCceEE
Q 022451 103 PKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDVI 179 (297)
Q Consensus 103 ~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~-~l~~~~~~yD~I 179 (297)
..+|.+||+| ++.++..+.+.....+|+++|.+++.++.+++. +. +.-...|..+ .+ ...|+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~---------~~~~~~~~~~~~~----~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI---------IDEGTTSIAKVED----FSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS---------CSEEESCTTGGGG----GCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC---------cchhcCCHHHHhh----ccCCEE
Confidence 4789999998 455666666643223899999999988877753 11 0012234333 22 358999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
|+..+.. ...+.++. +...|+++.+++-
T Consensus 99 ilavp~~---------~~~~vl~~-l~~~l~~~~iv~d 126 (314)
T 3ggo_A 99 MLSSPVR---------TFREIAKK-LSYILSEDATVTD 126 (314)
T ss_dssp EECSCGG---------GHHHHHHH-HHHHSCTTCEEEE
T ss_pred EEeCCHH---------HHHHHHHH-HhhccCCCcEEEE
Confidence 9986521 13467788 6888998877654
No 348
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.44 E-value=0.065 Score=48.18 Aligned_cols=74 Identities=11% Similarity=0.172 Sum_probs=55.3
Q ss_pred CCCCeEEEEccchhHHHHHHHhcCCCcE--EEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---cCCC
Q 022451 101 PNPKTIFIMGGGEGSTAREILRHKTVEK--VVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKES 175 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---~~~~ 175 (297)
..+.++++|-+|.|++...+.+. +... |.++|+|+...+..+.+++ ...++.+|..++... ....
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCC
Confidence 44668999999999998877764 2333 6899999999998887653 346778898765322 1246
Q ss_pred ceEEEEcCC
Q 022451 176 YDVIIGDLA 184 (297)
Q Consensus 176 yD~Ii~D~~ 184 (297)
+|+|+..++
T Consensus 84 ~Dll~ggpP 92 (295)
T 2qrv_A 84 FDLVIGGSP 92 (295)
T ss_dssp CSEEEECCC
T ss_pred cCEEEecCC
Confidence 999999987
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.44 E-value=0.11 Score=47.09 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=60.0
Q ss_pred CCCeEEEEccch-hHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE----cchHHHHhccCCC
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI----NDARAELESRKES 175 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~----~Da~~~l~~~~~~ 175 (297)
+.++||++|+|+ |.++.++++.. +..+|++++.+++-.+.+++. +.. .++. .|...-+. ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-GAD---------YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TCS---------EEECHHHHHHHHHHHH-TTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CCC---------EEeccccchHHHHHhh-cCCC
Confidence 678999999864 56677777754 135799999999999998873 211 1121 12112222 1347
Q ss_pred ceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|+|+-... . .+.++. +.+.|+++|.++.-
T Consensus 239 ~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLVG-----T-------EETTYN-LGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred ccEEEECCC-----C-------hHHHHH-HHHHhhcCCEEEEe
Confidence 999985532 1 135566 67899999998764
No 350
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.41 E-value=0.038 Score=50.26 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=44.7
Q ss_pred CCCeEEE-EcchHHHHhcc-CCCceEEEEcCCCCCCCCC---ccCc--ccHHHHHHHHcccCCCCcEEEEecC
Q 022451 155 DPRLELV-INDARAELESR-KESYDVIIGDLADPIEGGP---CYKL--YTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 155 ~~rv~~~-~~Da~~~l~~~-~~~yD~Ii~D~~~~~~~~p---~~~L--~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+...+++ .+|+.++|+.. ++++|+|+.|+|-....+. .... +..+.+.. +++.|+|||.++++..
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~-~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAE-AERVLSPTGSIAIFGG 107 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHH-HHHHEEEEEEEEEEEC
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHH-HHHHcCCCeEEEEEcC
Confidence 3457888 99999998763 4689999999973221000 0011 23466777 6899999999999875
No 351
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.38 E-value=0.045 Score=49.81 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=62.3
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCceE
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~yD~ 178 (297)
+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. +... .. +.+ ..|..+.+.. . ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~~-~~-~~~----~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GADY-VI-NPF----EEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCSE-EE-CTT----TSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCCE-EE-CCC----CcCHHHHHHHHcCCCCCCE
Confidence 678999999853 56677777766544899999999999988864 2110 00 000 1233344433 2 246999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+-... . .+.++. +.+.|+++|.++.-.
T Consensus 240 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG-----A-------PKALEQ-GLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEc
Confidence 986532 1 144566 578899999987653
No 352
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.37 E-value=0.13 Score=46.97 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=58.6
Q ss_pred CCCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH-HHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR-AELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~-~~l~~~~~~yD 177 (297)
..+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. +.. .++..+-. ++...-.+.+|
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga~---------~v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GAD---------HYIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TCS---------EEEEGGGTSCHHHHSCSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CCC---------EEEcCcCchHHHHHhhcCCC
Confidence 35678999999753 666777777654 4799999999988888873 211 11211101 12222225799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|+-...... + .. ++. +.+.|+++|.++.-
T Consensus 246 ~vid~~g~~~---~--~~-----~~~-~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSLT---D--ID-----FNI-MPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCST---T--CC-----TTT-GGGGEEEEEEEEEC
T ss_pred EEEECCCCCc---H--HH-----HHH-HHHHhcCCCEEEEe
Confidence 9986543200 1 11 122 46789999988754
No 353
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.28 E-value=0.051 Score=48.61 Aligned_cols=65 Identities=22% Similarity=0.178 Sum_probs=42.9
Q ss_pred CCCeEEEEcchHHHHhcc-CCCceEEEEcCCCC-CCC-C-CccCc--------c---cHHHHHHHHcccCCCCcEEEEec
Q 022451 155 DPRLELVINDARAELESR-KESYDVIIGDLADP-IEG-G-PCYKL--------Y---TKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 155 ~~rv~~~~~Da~~~l~~~-~~~yD~Ii~D~~~~-~~~-~-p~~~L--------~---t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
..+++++++|+.++++.. +++||+|++|+|-. ... . ....+ + -.++++. +.++|+|||.++++.
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~-~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWRE-VFRLLVPGGRLVIVV 97 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 457899999999988653 47899999998731 100 0 00000 0 1245667 689999999999886
Q ss_pred C
Q 022451 220 G 220 (297)
Q Consensus 220 ~ 220 (297)
+
T Consensus 98 ~ 98 (297)
T 2zig_A 98 G 98 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 354
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.20 E-value=0.41 Score=44.23 Aligned_cols=97 Identities=20% Similarity=0.344 Sum_probs=57.5
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhccCCCce
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELESRKESYD 177 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~---~Da~~~l~~~~~~yD 177 (297)
.+++|+++|+|. |..+...++..+ .+|+++|.++.-.+.+++.++. .+.... .|..+.+ ...|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l----~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV----KRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH----cCCC
Confidence 478999999863 223334444444 4899999999988877765432 122221 1222333 3589
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|+.....|.. ....+.+.+ +.+.++|||+++ +.
T Consensus 234 vVi~~~~~p~~--~t~~li~~~-----~l~~mk~g~~iV-~v 267 (377)
T 2vhw_A 234 LVIGAVLVPGA--KAPKLVSNS-----LVAHMKPGAVLV-DI 267 (377)
T ss_dssp EEEECCCCTTS--CCCCCBCHH-----HHTTSCTTCEEE-EG
T ss_pred EEEECCCcCCC--CCcceecHH-----HHhcCCCCcEEE-EE
Confidence 99986644431 122455543 345678999875 44
No 355
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.96 E-value=0.19 Score=45.89 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.++.. .+ +-..| .+.+....+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~-------~v-i~~~~-~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGAD-------DY-VIGSD-QAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCS-------CE-EETTC-HHHHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCc-------ee-ecccc-HHHHHHhcCCCCEEE
Confidence 678999999753 455666776654 58999999998888887444321 11 11122 233433335799998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
-....+. . ++. +.+.|+++|.++.-.
T Consensus 250 d~~g~~~------~------~~~-~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 250 DTVPVHH------A------LEP-YLSLLKLDGKLILMG 275 (357)
T ss_dssp ECCCSCC------C------SHH-HHTTEEEEEEEEECS
T ss_pred ECCCChH------H------HHH-HHHHhccCCEEEEeC
Confidence 5443211 1 223 468899999987653
No 356
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.96 E-value=1.8 Score=45.16 Aligned_cols=153 Identities=10% Similarity=0.100 Sum_probs=92.4
Q ss_pred CCeEEEEccchhHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc----------
Q 022451 103 PKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---------- 171 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~---------- 171 (297)
.-++++|-||.|++..-+.+. +. ..+.++|+|+...+..+.+| |...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN---------PGSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC---------CCCccccccHHHHhhhccchhhhhhh
Confidence 457999999999988777664 33 46789999999999888775 4556788887765321
Q ss_pred -----cCCCceEEEEcCC-CCCCC-CC---------ccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHH
Q 022451 172 -----RKESYDVIIGDLA-DPIEG-GP---------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (297)
Q Consensus 172 -----~~~~yD~Ii~D~~-~~~~~-~p---------~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~ 235 (297)
....+|+|+..++ .+++. +. ...| -.+|++. + +.++|.-+++=|+..-..+.....+..++
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L-~~~~~ri-v-~~~rPk~~llENV~glls~~~~~~~~~i~ 686 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY-C-DYYRPRFFLLENVRNFVSFKRSMVLKLTL 686 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTTGGGHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHH-HHHHHHH-H-HHhCCCEEEEeccHHHhccCcchHHHHHH
Confidence 1236899999887 23311 11 0112 2356665 3 57899888876652110012244667777
Q ss_pred HHHHhhCCceeEEEEecCccC---C-ceeEEEEecCC
Q 022451 236 NTLRQVFKYVVPYSAHIPSFA---D-TWGWIMVSIYN 268 (297)
Q Consensus 236 ~~l~~~F~~v~~~~~~vp~~~---~-~~~~~~as~~~ 268 (297)
+.|.+..=.+.........|| . ...|++|++.+
T Consensus 687 ~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~g 723 (1002)
T 3swr_A 687 RCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPG 723 (1002)
T ss_dssp HHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEECTT
T ss_pred HHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEeCC
Confidence 777765333333322333343 1 24567777543
No 357
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.95 E-value=0.12 Score=46.59 Aligned_cols=95 Identities=18% Similarity=0.247 Sum_probs=60.5
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhc-cCC
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES-RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~---~Da~~~l~~-~~~ 174 (297)
...++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +. ...+-. .|..+.+.. ..+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~--------~~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF--------DAAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC--------SEEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC--------cEEEecCCHHHHHHHHHHHhCC
Confidence 45789999997 45666666666544 5899999999988888553 21 111111 233344432 234
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|+++.... . +.++. +.+.|+++|.+++-.
T Consensus 214 ~~d~vi~~~g------~-------~~~~~-~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 214 GYDCYFDNVG------G-------EFLNT-VLSQMKDFGKIAICG 244 (333)
T ss_dssp CEEEEEESSC------H-------HHHHH-HHTTEEEEEEEEECC
T ss_pred CCeEEEECCC------h-------HHHHH-HHHHHhcCCEEEEEe
Confidence 7999986642 1 23556 578999999987653
No 358
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.83 E-value=0.083 Score=47.92 Aligned_cols=97 Identities=16% Similarity=0.220 Sum_probs=61.0
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEE
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~I 179 (297)
++++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. ... .. +.+ ..|..+.+.. ....+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~-~~~----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LV-NPL----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EE-CTT----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--cc-CcC----ccCHHHHHHHhcCCCCCEE
Confidence 678999999753 56677777765544899999999888877764 211 00 000 1233333322 24569999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+-... . .+.++. +.+.|+++|.++.-.
T Consensus 236 id~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSG-----N-------EAAIHQ-GLMALIPGGEARILG 262 (343)
T ss_dssp EECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EECCC-----C-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 85432 1 144566 578899999887653
No 359
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.78 E-value=0.23 Score=46.18 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=57.1
Q ss_pred CCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-C-CCeEEEE----c----chHHHHh
Q 022451 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-D-PRLELVI----N----DARAELE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~-~-~rv~~~~----~----Da~~~l~ 170 (297)
++.+|++||+|.-+ .+..+++..+ .+|+++|.++...+.+++. +..-..++ + ....-+. . .-...+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 57899999998433 3444444343 5899999999988888763 21100000 0 0000000 0 0011122
Q ss_pred ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
+.-...|+||.-...|. .+...|++++.+ +.++||.+++
T Consensus 261 e~l~~aDIVI~tv~iPg--~~ap~Lvt~emv-----~~MkpGsVIV 299 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG--RPAPRLVTAAAA-----TGMQPGSVVV 299 (381)
T ss_dssp HHHTTCSEEEECCCCTT--SCCCCCBCHHHH-----HTSCTTCEEE
T ss_pred HHHhcCCEEEECCCCCC--cccceeecHHHH-----hcCCCCcEEE
Confidence 22367999998764443 223367777644 4567777664
No 360
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.69 E-value=0.051 Score=49.30 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=61.2
Q ss_pred CCCCCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCC
Q 022451 100 HPNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKES 175 (297)
Q Consensus 100 ~~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~ 175 (297)
..+.++||++|+| .|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-ga~------~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRL-GAA------YVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhC-CCc------EEEeCCcccHHHHHHHHhCCCC
Confidence 3567899999876 5667777777654 5899999999988888874 211 0011111233343332 2347
Q ss_pred ceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|+|+-.... + .+.+. .++|+++|.++.-.
T Consensus 214 ~Dvvid~~g~-----~-------~~~~~--~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIGG-----P-------DGNEL--AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSCH-----H-------HHHHH--HHTEEEEEEEEECC
T ss_pred CcEEEECCCC-----h-------hHHHH--HHHhcCCCEEEEEe
Confidence 9999865321 1 22333 37899999997654
No 361
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.66 E-value=0.28 Score=44.89 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=57.2
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.++.. .-+-..| .+.+....+.+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~--------~v~~~~~-~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGAD--------SFLVSRD-QEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCS--------EEEETTC-HHHHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCc--------eEEeccC-HHHHHHhhCCCCEEE
Confidence 678999999753 555667777654 58999999998888777444321 1111112 223433335799998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
-....+. . ++. +.+.|+++|.++.-
T Consensus 257 d~~g~~~-------~-----~~~-~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVH-------P-----LLP-LFGLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCC-------C-----SHH-HHHHEEEEEEEEEC
T ss_pred ECCCcHH-------H-----HHH-HHHHHhcCCEEEEE
Confidence 6543211 1 123 35678899988754
No 362
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.58 E-value=0.38 Score=43.51 Aligned_cols=96 Identities=17% Similarity=0.063 Sum_probs=61.4
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE---EcchHHHHhc-cCC
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV---INDARAELES-RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~---~~Da~~~l~~-~~~ 174 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +. ...+- ..|..+.+.. ...
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~--------~~~~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG--------EVFIDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC--------CEEEETTTCSCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC--------ceEEecCccHhHHHHHHHHhCC
Confidence 45789999998 45666666666554 5899999999888888763 21 11111 1233334432 122
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|+|+.... . .+.++. +.+.|+++|.++.-.
T Consensus 238 ~~D~vi~~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINVSV-----S-------EAAIEA-STRYVRANGTTVLVG 269 (347)
T ss_dssp CEEEEEECSS-----C-------HHHHHH-HTTSEEEEEEEEECC
T ss_pred CCCEEEECCC-----c-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 7999987642 1 145666 689999999987653
No 363
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.51 E-value=0.11 Score=46.87 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=61.4
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhc-cCC
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES-RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~---~Da~~~l~~-~~~ 174 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++.++.. ..+-. .|..+.+.. ...
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~--------~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFD--------DAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCS--------EEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCc--------eEEecCCHHHHHHHHHHHhCC
Confidence 45789999996 56666777777654 58999999999888887433311 11111 133334432 235
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.+|+|+.... . +.++. +.+.|+++|.+++-
T Consensus 225 ~~d~vi~~~g------~-------~~~~~-~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVG------G-------KMLDA-VLVNMNMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSC------H-------HHHHH-HHTTEEEEEEEEEC
T ss_pred CCcEEEECCC------H-------HHHHH-HHHHHhcCCEEEEE
Confidence 6999986532 1 34566 57899999998764
No 364
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.51 E-value=0.082 Score=47.30 Aligned_cols=88 Identities=14% Similarity=0.240 Sum_probs=57.0
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.++++||++|+|+ |.++.++++..+. +|++++ +++-.+.+++. +.. .++ .| .+-+ .+.+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-Ga~---------~v~-~d-~~~v---~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-GVR---------HLY-RE-PSQV---TQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-TEE---------EEE-SS-GGGC---CSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-CCC---------EEE-cC-HHHh---CCCccEE
Confidence 5678999999853 6677788876654 899999 88888888874 221 122 24 2222 5679998
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+-.... + . +.. +.++|+++|.++.-.
T Consensus 204 ~d~~g~-----~-------~-~~~-~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 204 FDAVNS-----Q-------N-AAA-LVPSLKANGHIICIQ 229 (315)
T ss_dssp ECC--------------------T-TGGGEEEEEEEEEEC
T ss_pred EECCCc-----h-------h-HHH-HHHHhcCCCEEEEEe
Confidence 843221 1 1 123 468999999987653
No 365
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.41 E-value=0.31 Score=45.74 Aligned_cols=106 Identities=20% Similarity=0.209 Sum_probs=58.4
Q ss_pred CCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCC-----CCC-CeEEEE---cch-----H
Q 022451 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-----SDP-RLELVI---NDA-----R 166 (297)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~-----~~~-rv~~~~---~Da-----~ 166 (297)
.+.+|++||+|.-+ .+..+++..+ .+|+++|.++...+.+++. +..-... ++. ....+. .+. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhH
Confidence 57899999998433 3444555444 5899999999998888873 2110000 000 000000 000 0
Q ss_pred HHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 167 ~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
.-+.+.-...|+||.-...|.. +...|++++ +-+.++||.+++
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~--~ap~Lvt~e-----mv~~Mk~GsVIV 309 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR--PAPRLVTRE-----MLDSMKPGSVVV 309 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS--CCCCCBCHH-----HHTTSCTTCEEE
T ss_pred hHHHHHhcCCCEEEECCcCCCC--CCCEEecHH-----HHhcCCCCCEEE
Confidence 1122222468999987655532 234677765 345678888775
No 366
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.38 E-value=0.13 Score=47.11 Aligned_cols=98 Identities=16% Similarity=0.282 Sum_probs=62.7
Q ss_pred CCCCCeEEEEc--cchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCc
Q 022451 100 HPNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~y 176 (297)
..+.++||++| +|.|..+.++++..+ .+|++++.+++-.+.+++. +... -+.....|..+.+.. ....+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga~~------~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GCDR------PINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCSE------EEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CCcE------EEecCChhHHHHHHHhcCCCC
Confidence 35678999999 456777778887654 4899999999988888873 2110 000001233333432 23579
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-... . +.++. +.+.|+++|.++.-.
T Consensus 233 D~vid~~g------~-------~~~~~-~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 233 DVVYESVG------G-------AMFDL-AVDALATKGRLIVIG 261 (362)
T ss_dssp EEEEECSC------T-------HHHHH-HHHHEEEEEEEEECC
T ss_pred CEEEECCC------H-------HHHHH-HHHHHhcCCEEEEEe
Confidence 99985532 1 34555 578899999987653
No 367
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.25 E-value=0.1 Score=46.92 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=61.6
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga~------~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKAL-GAW------ETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCC------EEEeCCCccHHHHHHHHhCCCCc
Confidence 45789999983 45667777777654 5899999999999988874 211 0011111333444433 23479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-.... +.++. +.++|+++|.++.-.
T Consensus 211 Dvvid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-------------DTWLT-SLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-------------GGHHH-HHTTEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhcCCCEEEEEe
Confidence 998864321 23445 578999999998764
No 368
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.23 E-value=0.61 Score=36.08 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=46.0
Q ss_pred CCeEEEEccch-h-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcc-CCCce
Q 022451 103 PKTIFIMGGGE-G-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (297)
Q Consensus 103 ~~~VL~iG~G~-G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~-~~~yD 177 (297)
.++|+++|+|. | .++..+.+. ..+|+++|.|++.++.+++. .+.++.+|+.+ .+... -+.+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCC
Confidence 35899999874 2 234444443 35899999999988776642 35677788743 34432 35799
Q ss_pred EEEEcCC
Q 022451 178 VIIGDLA 184 (297)
Q Consensus 178 ~Ii~D~~ 184 (297)
+|+....
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998754
No 369
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.20 E-value=0.24 Score=43.86 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhccCCCc
Q 022451 100 HPNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELESRKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da-~~~l~~~~~~y 176 (297)
..+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +. . .++..+- .++.+.- +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga--------~-~~~~~~~~~~~~~~~-~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA--------E-EAATYAEVPERAKAW-GGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC--------S-EEEEGGGHHHHHHHT-TSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC--------C-EEEECCcchhHHHHh-cCc
Confidence 356789999997 45667777777654 4899999999888888763 21 1 1222111 2232222 579
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+|+- ... +.++. +.++|+++|.++.-
T Consensus 191 d~vid-~g~-------------~~~~~-~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VRG-------------KEVEE-SLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CSC-------------TTHHH-HHTTEEEEEEEEEC
T ss_pred eEEEE-CCH-------------HHHHH-HHHhhccCCEEEEE
Confidence 99986 431 11344 57899999988754
No 370
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.19 E-value=0.49 Score=44.37 Aligned_cols=94 Identities=24% Similarity=0.312 Sum_probs=59.9
Q ss_pred CCeEEEEccch-hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcc-CCCce
Q 022451 103 PKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (297)
Q Consensus 103 ~~~VL~iG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~-~~~yD 177 (297)
..+|+++|+|- |. +++.|.+. ...|++||.|++.++.+++. .+.++.+|+.+ .|+.. -++.|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccC
Confidence 45799999974 32 34444443 35799999999999988752 25678899854 45443 36799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|++...++. . + ..... ..+.+.|+..+++..
T Consensus 71 ~viv~~~~~~-----~---n-~~i~~-~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 71 VLINAIDDPQ-----T---N-LQLTE-MVKEHFPHLQIIARA 102 (413)
T ss_dssp EEEECCSSHH-----H---H-HHHHH-HHHHHCTTCEEEEEE
T ss_pred EEEECCCChH-----H---H-HHHHH-HHHHhCCCCeEEEEE
Confidence 9998765421 0 1 12222 346677776665543
No 371
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.16 E-value=0.098 Score=47.19 Aligned_cols=97 Identities=14% Similarity=0.275 Sum_probs=61.8
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga~------~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEY-GAE------YLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc------EEEeCCCchHHHHHHHHhCCCCc
Confidence 46789999993 45667777777654 5899999999999988874 211 0011111344444433 23569
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-.... +.++. +.++|+++|.++.-.
T Consensus 219 D~vid~~g~-------------~~~~~-~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK-------------DTFEI-SLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG-------------GGHHH-HHHHEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhccCCEEEEEc
Confidence 999865321 23455 567899999987653
No 372
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.10 E-value=0.16 Score=46.42 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=57.2
Q ss_pred CCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 103 PKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 103 ~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
+++||++|+|+ |..+.++++..+ .+|++++.++ +-.+.+++. +.. .+. ..|..+.+......+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~~~-ga~-------~v~--~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG-LEVWMANRREPTEVEQTVIEET-KTN-------YYN--SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT-CEEEEEESSCCCHHHHHHHHHH-TCE-------EEE--CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCccchHHHHHHHHh-CCc-------eec--hHHHHHHHHHhCCCCCE
Confidence 78999999843 445566666554 4899999998 777877763 211 111 01222233222257999
Q ss_pred EEEcCCCCCCCCCccCcccHHHH-HHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFY-EFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~-~~~~~~~L~pgGvl~~~~ 219 (297)
|+..... + ..+ +. +.+.|+++|.++.-.
T Consensus 250 vid~~g~-----~-------~~~~~~-~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA-----D-------VNILGN-VIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC-----C-------THHHHH-HGGGEEEEEEEEECS
T ss_pred EEECCCC-----h-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 9865432 1 134 55 678999999887653
No 373
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.03 E-value=0.25 Score=44.79 Aligned_cols=95 Identities=20% Similarity=0.331 Sum_probs=61.0
Q ss_pred CCCeEEEEc-c-chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceE
Q 022451 102 NPKTIFIMG-G-GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG-~-G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~ 178 (297)
+.++||++| + |.|..+.++++..+ .+|++++.+++-.+.+++. +... .. +.+ .|..+.+.. ..+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~~-vi-~~~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKM-GADI-VL-NHK-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHH-TCSE-EE-CTT-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CCcE-EE-ECC-----ccHHHHHHHhCCCCccE
Confidence 578999995 3 34666777777665 4899999999999999874 3110 00 011 233333333 3457998
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+-... ....++. +.++|+++|.++..
T Consensus 221 v~d~~g------------~~~~~~~-~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN------------TDMYYDD-MIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC------------HHHHHHH-HHHHEEEEEEEEES
T ss_pred EEECCC------------chHHHHH-HHHHhccCCEEEEE
Confidence 885431 1245566 67899999999754
No 374
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.89 E-value=0.18 Score=45.66 Aligned_cols=95 Identities=19% Similarity=0.275 Sum_probs=61.5
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~y 176 (297)
...++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+... .|..+.+.. . ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga~------~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSV-GAD------IVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TCS------EEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CCc------EEecCc-hhHHHHHHHHhCCCCc
Confidence 45789999996 45677777777665 4899999999988888874 211 001111 344444433 2 2469
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+|+-.... +.++. +.++|+++|.++.-
T Consensus 229 Dvvid~~g~-------------~~~~~-~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGG-------------PAFDD-AVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC---------------CHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCch-------------hHHHH-HHHhhcCCCEEEEE
Confidence 999865431 12344 56899999998764
No 375
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.86 E-value=0.28 Score=44.39 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=60.5
Q ss_pred CCCCCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE--cchHHHHhc-cC-
Q 022451 100 HPNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI--NDARAELES-RK- 173 (297)
Q Consensus 100 ~~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~--~Da~~~l~~-~~- 173 (297)
..+.++||++|+| .|..+.++++.....+|++++.+++-.+.+++. +.. ..+-. .|..+.+.. ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~--------~~~~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD--------YVINASMQDPLAEIRRITES 238 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS--------EEEETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCC--------EEecCCCccHHHHHHHHhcC
Confidence 3567899999987 444555666544135899999999998888763 211 11111 232222322 22
Q ss_pred CCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.+|+|+..... .+.++. +.+.|+++|.++.-.
T Consensus 239 ~~~d~vi~~~g~------------~~~~~~-~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 239 KGVDAVIDLNNS------------EKTLSV-YPKALAKQGKYVMVG 271 (347)
T ss_dssp SCEEEEEESCCC------------HHHHTT-GGGGEEEEEEEEECC
T ss_pred CCceEEEECCCC------------HHHHHH-HHHHHhcCCEEEEEC
Confidence 479999865421 134555 678999999987653
No 376
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.86 E-value=0.8 Score=42.06 Aligned_cols=98 Identities=19% Similarity=0.365 Sum_probs=53.2
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-.+.+++.++ ..+.....+... +...-...|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~-l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEAN-IKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHH-HHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHH-HHHHHhCCCEEE
Confidence 468999999853 223333344344 489999999988777765332 123232222211 111113589998
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~ 216 (297)
.....+.. ....+.+.+ +.+.++++|+++
T Consensus 235 ~~~g~~~~--~~~~li~~~-----~l~~mk~gg~iV 263 (369)
T 2eez_A 235 GAVLVPGA--KAPKLVTRD-----MLSLMKEGAVIV 263 (369)
T ss_dssp ECCC---------CCSCHH-----HHTTSCTTCEEE
T ss_pred ECCCCCcc--ccchhHHHH-----HHHhhcCCCEEE
Confidence 87654320 112444443 345678899775
No 377
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.74 E-value=0.16 Score=46.20 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCC--CeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCC
Q 022451 101 PNP--KTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKES 175 (297)
Q Consensus 101 ~~~--~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~ 175 (297)
.+. ++||+.|+ |.|..+.++++..+..+|++++.+++-.+.+++.++.. .-+.....|..+.+.. ..+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~------~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD------AAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS------EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc------eEEecCchHHHHHHHHhcCCC
Confidence 456 89999996 45556666666554448999999998888877643311 0001001233333332 2237
Q ss_pred ceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|+++.... . +.++. +.++|+++|.++.-
T Consensus 231 ~d~vi~~~G------~-------~~~~~-~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 231 VDVYFDNVG------G-------NISDT-VISQMNENSHIILC 259 (357)
T ss_dssp EEEEEESCC------H-------HHHHH-HHHTEEEEEEEEEC
T ss_pred CCEEEECCC------H-------HHHHH-HHHHhccCcEEEEE
Confidence 999986542 1 34566 57899999998764
No 378
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.72 E-value=0.21 Score=46.75 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=40.6
Q ss_pred CCCCeEEEEccchhHHHHHHH-hcCC-CcEEEEEECCHHHHHHHHhhhhh
Q 022451 101 PNPKTIFIMGGGEGSTAREIL-RHKT-VEKVVMCDIDEEVVEFCKSYLVV 148 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~a~~~f~~ 148 (297)
.+...|+|+|++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456789999999999998877 4433 47999999999999999998765
No 379
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.65 E-value=0.28 Score=44.40 Aligned_cols=94 Identities=16% Similarity=0.285 Sum_probs=60.6
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
.++++||++|+ |.|..+.++++..+ .+|+++ .+++-.+.+++. +.. . +. ...|..+.+.. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~l-Ga~------~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDL-GAT------P-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHH-TSE------E-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHc-CCC------E-ec-cCCCHHHHHHHHhcCCCc
Confidence 45789999993 45677778887664 489999 888888888774 211 1 22 22333344432 23579
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+-... . +.++. +.++|+++|.++.-.
T Consensus 218 D~vid~~g------~-------~~~~~-~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG------G-------PVLDA-SFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC------T-------HHHHH-HHHHEEEEEEEEESC
T ss_pred eEEEECCC------c-------HHHHH-HHHHHhcCCeEEEEc
Confidence 98885431 1 34555 568999999988653
No 380
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.45 E-value=0.52 Score=43.63 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=31.1
Q ss_pred CCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 022451 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKS 144 (297)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~ 144 (297)
.+++|+++|+|.=+ .+..+++..+ .+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH
Confidence 57899999997433 3445555555 479999999988777776
No 381
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.19 E-value=0.79 Score=37.17 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=56.6
Q ss_pred CCeEEEEccch-hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcc--CCCc
Q 022451 103 PKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR--KESY 176 (297)
Q Consensus 103 ~~~VL~iG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~--~~l~~~--~~~y 176 (297)
..+|+++|+|. |. +++.+.+.. ..+|+++|.|++.++.+++. .+.++.+|+. +.+... -+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 46899999873 22 334444430 24799999999888776642 2345666653 334433 4579
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|++..+++. ........ .+.+.|++.++...
T Consensus 107 d~vi~~~~~~~--------~~~~~~~~--~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPHHQ--------GNQTALEQ--LQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSSHH--------HHHHHHHH--HHHTTCCSEEEEEE
T ss_pred CEEEEeCCChH--------HHHHHHHH--HHHHCCCCEEEEEE
Confidence 99998654311 11223333 35677788777654
No 382
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.14 E-value=0.19 Score=45.17 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=59.8
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
.+.++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~~------~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GCH------HTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCC------EEEECCCHHHHHHHHHHhCCCCC
Confidence 45789999994 56667777776654 5899999999888888763 211 0000011233333322 13469
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+..... +.++. +.++|+++|.++.-.
T Consensus 216 d~vi~~~g~-------------~~~~~-~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-------------DTLQK-SLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-------------TTHHH-HHHTEEEEEEEEECC
T ss_pred eEEEECCcH-------------HHHHH-HHHhhccCCEEEEEe
Confidence 999865421 12445 568899999987653
No 383
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.11 E-value=0.24 Score=42.68 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=46.5
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchhHHH--HHHHhcCCCcEEEEEEC--CHHHHHHHHhhhhhccCCCCCCCeEEEEcch
Q 022451 90 ESLVHPALLHHPNPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDI--DEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (297)
Q Consensus 90 e~l~~~~l~~~~~~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEi--d~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da 165 (297)
|.|..+|++..-..++||++|+|.=+.. +.+++. ..+|++|+. ++++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 5566678777778999999999854443 344443 467888854 4444444432 3466654432
Q ss_pred HHHHhccCCCceEEEEcCCC
Q 022451 166 RAELESRKESYDVIIGDLAD 185 (297)
Q Consensus 166 ~~~l~~~~~~yD~Ii~D~~~ 185 (297)
. ...-..+|+||....+
T Consensus 85 ~---~~dL~~adLVIaAT~d 101 (223)
T 3dfz_A 85 G---EEDLLNVFFIVVATND 101 (223)
T ss_dssp C---GGGSSSCSEEEECCCC
T ss_pred C---HhHhCCCCEEEECCCC
Confidence 1 1222468999976543
No 384
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.11 E-value=0.16 Score=45.58 Aligned_cols=95 Identities=13% Similarity=0.084 Sum_probs=59.1
Q ss_pred CCCCeEEEEc--cchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc--cCC
Q 022451 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES--RKE 174 (297)
Q Consensus 101 ~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~--~~Da~~~l~~--~~~ 174 (297)
...++||+.| +|.|..+.++++..+ .+|++++.+++-.+.+++. +.. ..+- ..|..+.+.. ...
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~~--------~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GAW--------QVINYREEDLVERLKEITGGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TCS--------EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCC--------EEEECCCccHHHHHHHHhCCC
Confidence 4578999999 345556666666544 5899999999988888763 211 1111 1233333322 134
Q ss_pred CceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+|+|+.... . +.++. +.+.|+++|.++.-.
T Consensus 209 ~~D~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSVG------R-------DTWER-SLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECSC------G-------GGHHH-HHHTEEEEEEEEECC
T ss_pred CceEEEECCc------h-------HHHHH-HHHHhcCCCEEEEEe
Confidence 6999986642 1 23455 578999999987654
No 385
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.04 E-value=0.17 Score=46.10 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=60.4
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCce
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD 177 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~------~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERL-GAK------RGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CCC------EEEeCCchHHHHHHHHHhCCCce
Confidence 45789999953 45666777777654 5899999999999988874 211 0011111233333322 245799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|+-.... +.++. +.+.|+++|.++.-.
T Consensus 238 vvid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIGA-------------AYFER-NIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCCG-------------GGHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCCH-------------HHHHH-HHHHhccCCEEEEEE
Confidence 98865421 12444 567899999987653
No 386
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.97 E-value=0.17 Score=45.75 Aligned_cols=97 Identities=13% Similarity=0.164 Sum_probs=60.6
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~y 176 (297)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. . ...+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga~------~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GAD------ETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CCC------EEEcCCcccHHHHHHHHhCCCCc
Confidence 45789999997 56677777777654 5899999999998888763 211 0001001233333332 2 2479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+.... + +.++. +.+.|+++|.++.-.
T Consensus 237 d~vi~~~g-~------------~~~~~-~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A------------LYFEG-VIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S------------SSHHH-HHHHEEEEEEEEESS
T ss_pred eEEEECCC-H------------HHHHH-HHHhhccCCEEEEEe
Confidence 99986643 1 12344 567889999887653
No 387
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.56 E-value=0.38 Score=43.48 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=49.9
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL 169 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l 169 (297)
..++.-|||--||+|+++.++.+. ..+.+++|++|..++++++++.... .....+.+|+++..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~-----~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNN-----ISEEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSC-----SCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhcc-----cchHHHHHHHHHHH
Confidence 356778999999999999999986 4789999999999999999875432 23555667766654
No 388
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.53 E-value=5.9 Score=42.56 Aligned_cols=153 Identities=10% Similarity=0.102 Sum_probs=91.1
Q ss_pred CCCeEEEEccchhHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---------
Q 022451 102 NPKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--------- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--------- 171 (297)
..-++++|-+|.|++..-+.+. +. ..+.++|+|+...+.-+.++ |...++.+|...++..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~gdi~~~ 919 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNN---------PGTTVFTEDCNVLLKLVMAGEVTNS 919 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHTTTCSBCS
T ss_pred CCceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC---------CCCcEeeccHHHHhHhhhccchhhh
Confidence 3457999999999998877664 33 46789999999999888765 3456778888766421
Q ss_pred ------cCCCceEEEEcCC-CCCCC-CCc---------cCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHH
Q 022451 172 ------RKESYDVIIGDLA-DPIEG-GPC---------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCI 234 (297)
Q Consensus 172 ------~~~~yD~Ii~D~~-~~~~~-~p~---------~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i 234 (297)
.....|+|+..++ .+++. +.. ..| -.+|++. + +.++|.-+++=|+..-..+.....+..+
T Consensus 920 ~~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L-~~~~lri-v-~~~rPk~fv~ENV~glls~~~g~~~~~i 996 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY-C-DYYRPRFFLLENVRNFVSYRRSMVLKLT 996 (1330)
T ss_dssp SCCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTTTTTHHHHHH
T ss_pred hhhhccccCccceEEecCCCcccccccccccccccchhhHH-HHHHHHH-H-HHhcCcEEEEeccHHHhccCccHHHHHH
Confidence 0135899998887 23321 110 012 2346665 3 5789987776664211011233466777
Q ss_pred HHHHHhhCCceeEEEEecCccC---Cc-eeEEEEecC
Q 022451 235 YNTLRQVFKYVVPYSAHIPSFA---DT-WGWIMVSIY 267 (297)
Q Consensus 235 ~~~l~~~F~~v~~~~~~vp~~~---~~-~~~~~as~~ 267 (297)
+..|.+..=.+.........|| .+ ..|+++.+.
T Consensus 997 l~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 997 LRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred HHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 7777765333333322323343 22 346666654
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.19 E-value=0.61 Score=43.56 Aligned_cols=43 Identities=23% Similarity=0.273 Sum_probs=31.4
Q ss_pred CCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhh
Q 022451 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (297)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (297)
.+++|+++|+|.-+ .+..+++..+ .+|+++|.++...+.+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~l 214 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQSM 214 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc
Confidence 47899999997433 3445555455 4899999999988877653
No 390
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.98 E-value=1.4 Score=34.63 Aligned_cols=98 Identities=10% Similarity=0.113 Sum_probs=56.7
Q ss_pred CCeEEEEccchhH--HHHHHHhcCCCcEEEEEECC-HHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhc-cCCCc
Q 022451 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID-EEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELES-RKESY 176 (297)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid-~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~--~~l~~-~~~~y 176 (297)
.++|+++|+|.=+ ++..|.+. ..+|+++|.+ ++..+..++.+ ...+.++.+|+. +.+.. .-+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~--------~~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRL--------GDNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHH--------CTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhh--------cCCCeEEEcCCCCHHHHHHcChhhC
Confidence 4689999975222 23444443 3579999998 45444333322 134788899875 33443 24679
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+|++...+.. .-..... ..+.+.|...++....
T Consensus 73 d~vi~~~~~d~---------~n~~~~~-~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 73 RAILALSDNDA---------DNAFVVL-SAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SEEEECSSCHH---------HHHHHHH-HHHHHTSSSCEEEECS
T ss_pred CEEEEecCChH---------HHHHHHH-HHHHHCCCCEEEEEEC
Confidence 99998764311 1122223 3466777777776643
No 391
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.98 E-value=1.6 Score=36.46 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=56.0
Q ss_pred eEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhc-cCCCceEE
Q 022451 105 TIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELES-RKESYDVI 179 (297)
Q Consensus 105 ~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~-~~~~yD~I 179 (297)
+|+++|+|.= .++..+.+. ..+|+++|.|++.++...+. ..+.++.+|+.+ .+.. .-+..|+|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~----------~~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKK----------LKATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHH----------SSSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHH----------cCCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 6899998632 234444443 35799999999988765432 235678888754 3433 23679999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
++...+.. ...+... +.+.+.+...++...
T Consensus 70 i~~~~~d~---------~n~~~~~-~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 70 VILTPRDE---------VNLFIAQ-LVMKDFGVKRVVSLV 99 (218)
T ss_dssp EECCSCHH---------HHHHHHH-HHHHTSCCCEEEECC
T ss_pred EEecCCcH---------HHHHHHH-HHHHHcCCCeEEEEE
Confidence 98764321 1123333 345566666666554
No 392
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.75 E-value=4.2 Score=38.65 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=61.5
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC-------CCCCeEEEEcchHHHHhccC
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF-------SDPRLELVINDARAELESRK 173 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f-~~~~~~~-------~~~rv~~~~~Da~~~l~~~~ 173 (297)
.+|.+||+|. +.++..+++..+..+|+++|+|++.++..++.. +.....+ ...+++ ...|..+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~-~t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLF-FSSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEE-EESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEE-EECCHHHHhh---
Confidence 4899999994 344566666532468999999999988776421 0000000 001232 2334333332
Q ss_pred CCceEEEEcCCCCCCCC-----CccCc-ccHHHHHHHHcccCCCCcEEEEe
Q 022451 174 ESYDVIIGDLADPIEGG-----PCYKL-YTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~-----p~~~L-~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
..|+||+..+.|.... ....+ +..+..+. +.+.|++|-+++..
T Consensus 86 -~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~~ 134 (481)
T 2o3j_A 86 -EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRT-IAQYAGGPKIVVEK 134 (481)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHHCCSCEEEEEC
T ss_pred -cCCEEEEecCCccccccccccCCCcHHHHHHHHHH-HHHhCCCCCEEEEC
Confidence 3799999987653110 00122 23456677 67889887766543
No 393
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.74 E-value=1.5 Score=32.09 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=42.2
Q ss_pred CCeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhccCCCceE
Q 022451 103 PKTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRKESYDV 178 (297)
Q Consensus 103 ~~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~~~~yD~ 178 (297)
.++|+++|+|.- .++..+++. +..+|++++.++.-.+.++. ..+.++..|... .+...-+.+|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 468999998421 123444443 34689999999987766552 234556555532 23222346999
Q ss_pred EEEcC
Q 022451 179 IIGDL 183 (297)
Q Consensus 179 Ii~D~ 183 (297)
|+...
T Consensus 73 vi~~~ 77 (118)
T 3ic5_A 73 VISAA 77 (118)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99875
No 394
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.62 E-value=0.29 Score=44.60 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=59.8
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--cCCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~--~~~~y 176 (297)
.+.++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. ....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga~------~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQN-GAH------EVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHc-CCC------EEEeCCCchHHHHHHHHcCCCCc
Confidence 45789999996 45666666776554 5899999999988888764 110 0001111233333322 23479
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+.... . +.++. +.+.|+++|.++.-.
T Consensus 241 D~vi~~~G------~-------~~~~~-~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA------N-------VNLSK-DLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH------H-------HHHHH-HHHHEEEEEEEEECC
T ss_pred EEEEECCC------h-------HHHHH-HHHhccCCCEEEEEe
Confidence 99986532 1 23455 568899999987643
No 395
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=90.62 E-value=0.27 Score=43.80 Aligned_cols=85 Identities=19% Similarity=0.247 Sum_probs=52.6
Q ss_pred CCceEEEEcCCCCCCCCC-c---c--CcccHHHHHHHHcccCCCCcEEEEecCCCCCcCC-chHHHHHHHHHHhhCCcee
Q 022451 174 ESYDVIIGDLADPIEGGP-C---Y--KLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSH-TEVFSCIYNTLRQVFKYVV 246 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p-~---~--~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~-~~~~~~i~~~l~~~F~~v~ 246 (297)
++||+|++|...+..... . . .+.+. .... +.++|+|||.+++.. |.. .+..+.+.+.+.+.|..+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~L-al~f-A~~vLkPGGtfV~Kv-----yggaDr~se~lv~~LaR~F~~Vr 277 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM-LTKK-ACLHLNPGGTCVSIG-----YGYADRASESIIGAIARQFKFSR 277 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH-THHH-HGGGEEEEEEEEEEE-----CCCCSHHHHHHHHHHHTTEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHH-HHHH-HHHhcCCCceEEEEE-----ecCCcccHHHHHHHHHHhcceee
Confidence 679999999875543211 0 0 01111 2333 469999999999885 222 2356889999999999887
Q ss_pred EEEEecC--ccCCceeEEEEecCC
Q 022451 247 PYSAHIP--SFADTWGWIMVSIYN 268 (297)
Q Consensus 247 ~~~~~vp--~~~~~~~~~~as~~~ 268 (297)
... | +....-.|+++....
T Consensus 278 ~vK---P~ASR~StEvf~La~gf~ 298 (320)
T 2hwk_A 278 VCK---PKSSLEETEVLFVFIGYD 298 (320)
T ss_dssp EEC---CTTCCSTTCEEEEEEEEC
T ss_pred eeC---CCCccccceEEEEEEeec
Confidence 553 3 222334566666433
No 396
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.46 E-value=0.79 Score=41.90 Aligned_cols=97 Identities=15% Similarity=0.271 Sum_probs=57.6
Q ss_pred CCCCeEEEEc--cchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.++++||++| +|.|..+.++++..+ .+|++++ +++-.+.+++. +.. .-+.....|..+.+... ..+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga~------~v~~~~~~~~~~~~~~~-~g~D~ 251 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GAD------DVIDYKSGSVEEQLKSL-KPFDF 251 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TCS------EEEETTSSCHHHHHHTS-CCBSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CCC------EEEECCchHHHHHHhhc-CCCCE
Confidence 4568999999 345667777777664 5898888 66667777653 211 00111112333334332 46999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+-.... +. ..++. ..++|+++|.++.-.
T Consensus 252 vid~~g~-----~~------~~~~~-~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVGG-----ST------ETWAP-DFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSCT-----TH------HHHGG-GGBCSSSCCEEEESC
T ss_pred EEECCCC-----hh------hhhHH-HHHhhcCCcEEEEeC
Confidence 9855421 10 12344 568999999997643
No 397
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.45 E-value=2 Score=40.67 Aligned_cols=102 Identities=18% Similarity=0.273 Sum_probs=63.4
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-----------hccCCCCCCCeEEEEcchHHHH
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-----------VNKEAFSDPRLELVINDARAEL 169 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~-----------~~~~~~~~~rv~~~~~Da~~~l 169 (297)
.++|.+||+|. +.++..+++. ..+|+++|++++.++.+++... ...........++ ..|. +.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 35799999995 3455666553 3589999999999887766421 0110001122333 4553 222
Q ss_pred hccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 170 ESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 170 ~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
...|+||...+.. .-...+.++. +...++|+.+++.++.
T Consensus 113 ----~~aDlVIeaVpe~-------~~~k~~v~~~-l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 113 ----STVDLVVEAVFED-------MNLKKKVFAE-LSALCKPGAFLCTNTS 151 (463)
T ss_dssp ----TTCSEEEECCCSC-------HHHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred ----CCCCEEEEcCCCC-------HHHHHHHHHH-HHhhCCCCeEEEeCCC
Confidence 4589999987531 1123467788 7888999998887654
No 398
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.42 E-value=0.56 Score=40.72 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=24.2
Q ss_pred CCCeEEEEccch-hH-HHHHHHhcCCCcEEEEEECCH
Q 022451 102 NPKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~-~~~~l~~~~~~~~v~~VEid~ 136 (297)
..++||++|+|+ |. ++..|++ .+..+|+.+|.|.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCC
Confidence 357899999973 33 3444444 3578999999996
No 399
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.32 E-value=3.1 Score=42.02 Aligned_cols=57 Identities=14% Similarity=0.052 Sum_probs=39.1
Q ss_pred CCeEEEEccchhHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH
Q 022451 103 PKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~ 168 (297)
..+|+||-||.|++..=+.+.. ...-+.++|+|+.+++.-+.+++ ...++.+|..++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---------~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---------QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---------TSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---------CCceecCcHHHh
Confidence 3579999999888865544321 12457799999999999888763 345555665443
No 400
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.11 E-value=2.7 Score=31.71 Aligned_cols=70 Identities=21% Similarity=0.274 Sum_probs=42.4
Q ss_pred CCeEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhc-cCCCce
Q 022451 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELES-RKESYD 177 (297)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~--~~l~~-~~~~yD 177 (297)
..+|+++|+|.-+ ++..+.+. ..+|+++|.+++.++..++.+ .+.++.+|.. +.+.. .-+.+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 3579999986422 23444443 358999999998776555321 2345556643 22332 235799
Q ss_pred EEEEcCC
Q 022451 178 VIIGDLA 184 (297)
Q Consensus 178 ~Ii~D~~ 184 (297)
+|++...
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9998764
No 401
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.08 E-value=1.4 Score=39.80 Aligned_cols=102 Identities=10% Similarity=0.107 Sum_probs=64.3
Q ss_pred CCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc------cCCCCC--------CCeEEEEcchH
Q 022451 103 PKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KEAFSD--------PRLELVINDAR 166 (297)
Q Consensus 103 ~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~------~~~~~~--------~rv~~~~~Da~ 166 (297)
.++|.+||+| +++++..+++. ..+|+++|.+++.++.+++..... ...... .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 4689999998 34566666664 347999999999998876542110 000000 13443 24433
Q ss_pred HHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 167 ~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.+ +..|+|+...+.. .-...++|+. +...++|+-+++.++
T Consensus 83 eav----~~aDlVieavpe~-------~~~k~~v~~~-l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 83 EAV----EGVVHIQECVPEN-------LDLKRKIFAQ-LDSIVDDRVVLSSSS 123 (319)
T ss_dssp HHT----TTEEEEEECCCSC-------HHHHHHHHHH-HHTTCCSSSEEEECC
T ss_pred HHH----hcCCEEEEeccCC-------HHHHHHHHHH-HHhhCCCCeEEEEeC
Confidence 333 4589999987531 1123577888 789999999887665
No 402
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.99 E-value=3 Score=39.39 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=78.1
Q ss_pred CCCeEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCC--------CCCCeEEEEcchHHHHh
Q 022451 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAF--------SDPRLELVINDARAELE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~-~~~~~~--------~~~rv~~~~~Da~~~l~ 170 (297)
..-++-+||+|.=+ ++..+++. .-+|+++|+|++.++..++... .....+ ...++++ ..|..+.+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 34589999998443 34555553 3589999999999887765310 000000 0123332 35544444
Q ss_pred ccCCCceEEEEcCCCCCC--CCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeEE
Q 022451 171 SRKESYDVIIGDLADPIE--GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPY 248 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~--~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (297)
+..|+||+..+.|.. .+.+.--+-++.++. +.+.|++|-+++..+..| ....+.+.+.+.+..+.....
T Consensus 83 ---~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~-i~~~l~~g~iVV~~STv~-----pgtt~~l~~~l~e~~~~~d~~ 153 (446)
T 4a7p_A 83 ---KDADAVFIAVGTPSRRGDGHADLSYVFAAARE-IAENLTKPSVIVTKSTVP-----VGTGDEVERIIAEVAPNSGAK 153 (446)
T ss_dssp ---TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHH-HHHSCCSCCEEEECSCCC-----TTHHHHHHHHHHHHSTTSCCE
T ss_pred ---hcCCEEEEEcCCCCccccCCccHHHHHHHHHH-HHHhcCCCCEEEEeCCCC-----chHHHHHHHHHHHhCCCCCce
Confidence 347999998876541 111111123455666 678899887776654322 233445555566555443333
Q ss_pred EEecCcc
Q 022451 249 SAHIPSF 255 (297)
Q Consensus 249 ~~~vp~~ 255 (297)
...-|.+
T Consensus 154 v~~~Pe~ 160 (446)
T 4a7p_A 154 VVSNPEF 160 (446)
T ss_dssp EEECCCC
T ss_pred EEeCccc
Confidence 3566776
No 403
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.90 E-value=0.91 Score=41.49 Aligned_cols=96 Identities=11% Similarity=0.198 Sum_probs=59.6
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCce
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD 177 (297)
.++++||++|+ |.|.++.++++..+ .+|+++- +++-.+.++++ +.. .-+.....|..+.++. .++++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga~------~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG-YIPIATC-SPHNFDLAKSR-GAE------EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TCS------EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe-CHHHHHHHHHc-CCc------EEEECCCchHHHHHHHHccCCcc
Confidence 56789999998 36778888888765 4777774 88888888874 211 0111112344444443 345699
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccC-CCCcEEEEe
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRL-NPEGIFVTQ 218 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L-~pgGvl~~~ 218 (297)
+|+-... . .+.++. +.+.| +++|.++.-
T Consensus 234 ~v~d~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT-----N-------VESTTF-CFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC-----S-------HHHHHH-HHHHSCTTCEEEEES
T ss_pred EEEECCC-----c-------hHHHHH-HHHHhhcCCCEEEEE
Confidence 9885432 1 144555 56778 599998754
No 404
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.82 E-value=10 Score=33.58 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=66.5
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECC--HHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDID--EEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid--~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..+|.+||+|. ..++..+++.. ..+|+++|.+ +...+.+++. .++ ...|..+.+. ..|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~----~aDv 86 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAG----ECDV 86 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHH----HCSE
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHh----cCCE
Confidence 46899999983 34566666642 3489999997 5666665542 122 2234444443 3799
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCcee
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVV 246 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (297)
||+-.+.+. ..+.++. +...|+++-+++-.+. ........+.+.+.+.++.+.
T Consensus 87 Vi~~vp~~~---------~~~~~~~-l~~~l~~~~ivvd~st-----~~~~~~~~~~~~~~~~~~g~~ 139 (312)
T 3qsg_A 87 IFSLVTAQA---------ALEVAQQ-AGPHLCEGALYADFTS-----CSPAVKRAIGDVISRHRPSAQ 139 (312)
T ss_dssp EEECSCTTT---------HHHHHHH-HGGGCCTTCEEEECCC-----CCHHHHHHHHHHHHHHCTTCE
T ss_pred EEEecCchh---------HHHHHHh-hHhhcCCCCEEEEcCC-----CCHHHHHHHHHHHHhhcCCCe
Confidence 999876432 1245677 6888988776653322 133444555666666554443
No 405
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.73 E-value=3 Score=39.51 Aligned_cols=73 Identities=21% Similarity=0.202 Sum_probs=50.8
Q ss_pred CCCCeEEEEccchh-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcc-CCCc
Q 022451 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~-~~~y 176 (297)
...++|+++|+|.- ..+...+.. ..+|..+|.|++-.+.+.+.+ ++..++++|+.+ .|.+. -+..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 45689999998743 323333332 368999999999887766543 568899999964 45543 2679
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|+++.-..
T Consensus 302 D~~ia~T~ 309 (461)
T 4g65_A 302 DVFIALTN 309 (461)
T ss_dssp SEEEECCS
T ss_pred cEEEEccc
Confidence 99887654
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.66 E-value=1.2 Score=38.82 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=54.9
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCC-CceEEE
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKE-SYDVII 180 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~-~yD~Ii 180 (297)
++|.+||+|. +.++..+.+.....+|+++|.+++.++.++++ +.. + . ...|..+.+ . ..|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~------~--~-~~~~~~~~~----~~~aDvVi 67 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GII------D--E-GTTSIAKVE----DFSPDFVM 67 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSC------S--E-EESCGGGGG----GTCCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CCc------c--c-ccCCHHHHh----cCCCCEEE
Confidence 4799999983 34455555532123799999999988777643 110 1 1 123433333 3 589999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
+..+.. ...+.++. +...|+++.+++.
T Consensus 68 lavp~~---------~~~~v~~~-l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSPVR---------TFREIAKK-LSYILSEDATVTD 94 (281)
T ss_dssp ECSCHH---------HHHHHHHH-HHHHSCTTCEEEE
T ss_pred EcCCHH---------HHHHHHHH-HHhhCCCCcEEEE
Confidence 986421 13466777 6778888876654
No 407
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.64 E-value=0.38 Score=43.74 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=58.8
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-c-CCCc
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~-~~~y 176 (297)
...++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .-+.....|..+.+.. . ...+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~~------~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GAA------AGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCc------EEEecCChHHHHHHHHHhcCCCc
Confidence 45789999984 45666666666554 5899999999988888653 211 0000001233333332 2 2469
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+|+..... +.++. +.++|+++|.++.-.
T Consensus 233 d~vi~~~G~-------------~~~~~-~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-------------SYWEK-NVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-------------GGHHH-HHHHEEEEEEEEECC
T ss_pred eEEEECCCc-------------hHHHH-HHHhccCCCEEEEEe
Confidence 999866421 12344 467889999987654
No 408
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.58 E-value=0.46 Score=42.51 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=25.0
Q ss_pred CCCeEEEEccch-hHH-HHHHHhcCCCcEEEEEECCH
Q 022451 102 NPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 136 (297)
...+||++|+|+ |+. +..|++ .+..+++.+|-|.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~-aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTR-CGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHH-cCCCEEEEECCCc
Confidence 357999999984 443 444554 4689999999886
No 409
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.57 E-value=1.3 Score=38.98 Aligned_cols=102 Identities=16% Similarity=0.225 Sum_probs=62.4
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc------cC-CCCC-------CCeEEEEcchH
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KE-AFSD-------PRLELVINDAR 166 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~------~~-~~~~-------~rv~~~~~Da~ 166 (297)
-++|.+||+|. ..++..+++. ..+|+++|.+++.++.+++.+... .. .+.. .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 36899999984 3445555554 358999999999988877653110 00 0000 12232 34433
Q ss_pred HHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 167 ~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+.+ +..|+||...+... -...++++. +...++|+.+++.++
T Consensus 81 ~~~----~~aDlVi~av~~~~-------~~~~~v~~~-l~~~~~~~~il~s~t 121 (283)
T 4e12_A 81 QAV----KDADLVIEAVPESL-------DLKRDIYTK-LGELAPAKTIFATNS 121 (283)
T ss_dssp HHT----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECC
T ss_pred HHh----ccCCEEEEeccCcH-------HHHHHHHHH-HHhhCCCCcEEEECC
Confidence 332 45899999875321 123467788 788899988887665
No 410
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.41 E-value=0.53 Score=42.61 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=55.2
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCce
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD 177 (297)
.+.++||++|+ |.|.++.++++..+..+|.+++ ++.-.+.++ ++.. .-+. ...|..+.+.. ..+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~------~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVT------HLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSS------EEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCc------EEEc-CCccHHHHHHHhcCCCce
Confidence 56789999987 3466777787765567888888 454445554 3321 0111 12333344433 345799
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+|+-.... + .++. +.++|+++|.+++-.
T Consensus 211 vv~d~~g~-----~--------~~~~-~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCG-----D--------NTGK-GLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC---------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCc-----h--------hHHH-HHHHhhcCCEEEEEC
Confidence 98855421 1 1234 578999999998653
No 411
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.37 E-value=1.3 Score=41.44 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=34.3
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhh
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (297)
.+.++||++|+ |.|..+.++++..+ .++++++.+++-.+.+++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 45789999996 45667777777654 5888899999999988764
No 412
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.37 E-value=0.68 Score=38.98 Aligned_cols=69 Identities=13% Similarity=0.181 Sum_probs=45.1
Q ss_pred CCCeEEEEccchhHH----HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCe-EEEEcchHHHHhccCCCc
Q 022451 102 NPKTIFIMGGGEGST----AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL-ELVINDARAELESRKESY 176 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~----~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv-~~~~~Da~~~l~~~~~~y 176 (297)
.+++||+.|+. |.+ ++++++. ..+|++++.++.-.+.... .++ +++.+|..+.+...-+..
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~ 85 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNK--GHEPVAMVRNEEQGPELRE-----------RGASDIVVANLEEDFSHAFASI 85 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH-----------TTCSEEEECCTTSCCGGGGTTC
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHh-----------CCCceEEEcccHHHHHHHHcCC
Confidence 56789999964 444 3444443 4689999999876543322 357 888888763333333578
Q ss_pred eEEEEcCC
Q 022451 177 DVIIGDLA 184 (297)
Q Consensus 177 D~Ii~D~~ 184 (297)
|+|++.+.
T Consensus 86 D~vi~~ag 93 (236)
T 3e8x_A 86 DAVVFAAG 93 (236)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998876
No 413
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.33 E-value=1.3 Score=42.31 Aligned_cols=102 Identities=19% Similarity=0.283 Sum_probs=64.5
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCC------------CCeEEEEcchHH
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSD------------PRLELVINDARA 167 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~-~~~~~~------------~rv~~~~~Da~~ 167 (297)
.++|.+||+|. ++++..+++. ..+|+++|++++.++.+++.+... ...... .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 46899999984 5566666664 357999999999999887653210 000001 133332 332 1
Q ss_pred HHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 168 ~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
.+ +..|+||...+.. .-...+.|+. +.+.++|+.+++.|+.
T Consensus 81 ~~----~~aDlVIeAVpe~-------~~vk~~v~~~-l~~~~~~~~IlasntS 121 (483)
T 3mog_A 81 AL----AAADLVIEAASER-------LEVKKALFAQ-LAEVCPPQTLLTTNTS 121 (483)
T ss_dssp GG----GGCSEEEECCCCC-------HHHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred Hh----cCCCEEEEcCCCc-------HHHHHHHHHH-HHHhhccCcEEEecCC
Confidence 12 3579999887531 1123477888 7889999999988764
No 414
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.23 E-value=1.3 Score=38.50 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=24.4
Q ss_pred CCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCH
Q 022451 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~ 136 (297)
...+||++|+|+ |......+...+..+++.+|-|.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999984 44333333345688999999873
No 415
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.10 E-value=5.7 Score=36.29 Aligned_cols=108 Identities=13% Similarity=0.114 Sum_probs=66.9
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+|.+||+|. ..++..+++. ..+|+++|.+++.++.+.+. .+. ...|..+.+... ++.|+|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a-~~~DvVi 86 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL-VKPRVVW 86 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS-CSSCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC-CCCCEEE
Confidence 46899999983 3455666664 35899999999887766542 111 134555666543 4579999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
+-.+.+ ...+.++. +...|++|-+++-.... ......++.+.+.+
T Consensus 87 ~~vp~~---------~v~~vl~~-l~~~l~~g~iiId~st~-----~~~~~~~~~~~l~~ 131 (358)
T 4e21_A 87 LMVPAA---------VVDSMLQR-MTPLLAANDIVIDGGNS-----HYQDDIRRADQMRA 131 (358)
T ss_dssp ECSCGG---------GHHHHHHH-HGGGCCTTCEEEECSSC-----CHHHHHHHHHHHHT
T ss_pred EeCCHH---------HHHHHHHH-HHhhCCCCCEEEeCCCC-----ChHHHHHHHHHHHH
Confidence 987532 34567777 78889887766533221 22333445555554
No 416
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.66 E-value=2.2 Score=37.85 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=55.6
Q ss_pred CCCCCeEEEEc--cchhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhccCCCc
Q 022451 100 HPNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESY 176 (297)
Q Consensus 100 ~~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~-~l~~~~~~y 176 (297)
..+..+||++| +|.|..+.++++..+ .+|+++..++ -.+.+++. +.. .++..+-.+ +.. .-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~~~-~~~~~~~l-Ga~---------~~i~~~~~~~~~~-~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTASKR-NHAFLKAL-GAE---------QCINYHEEDFLLA-ISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEECHH-HHHHHHHH-TCS---------EEEETTTSCHHHH-CCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeccc-hHHHHHHc-CCC---------EEEeCCCcchhhh-hccCC
Confidence 35678999997 345677788888765 4788887544 47777763 211 112111111 222 22569
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+|+-... . +.++. +.++|+++|.++.-
T Consensus 217 D~v~d~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG-----G--------DVGIQ-SIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC-----H--------HHHHH-HGGGEEEEEEEEEC
T ss_pred CEEEECCC-----c--------HHHHH-HHHhccCCCEEEEe
Confidence 98885431 1 22355 67999999999865
No 417
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.61 E-value=0.51 Score=42.07 Aligned_cols=90 Identities=24% Similarity=0.289 Sum_probs=57.5
Q ss_pred eEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-cCCCceEEEE
Q 022451 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVIIG 181 (297)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-~~~~yD~Ii~ 181 (297)
+||++|+ |.|..+.++++..+. +|++++.+++-.+.+++. +.. .++..+-...++. ....+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GAN---------RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TCS---------EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CCC---------EEEecCCHHHHHhhcCCCccEEE-
Confidence 5999986 567788888887654 899999999999999874 211 1111110011211 235799876
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|.. + .+.++. +.++|+++|.++.-.
T Consensus 217 d~~-----g-------~~~~~~-~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 217 DTV-----G-------DKVLAK-VLAQMNYGGCVAACG 241 (324)
T ss_dssp ESS-----C-------HHHHHH-HHHTEEEEEEEEECC
T ss_pred ECC-----C-------cHHHHH-HHHHHhcCCEEEEEe
Confidence 332 1 135666 678999999997653
No 418
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.56 E-value=0.7 Score=41.74 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=40.0
Q ss_pred CCCCCeEEEEccchhHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhhh
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLV 147 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~f~ 147 (297)
..++.-|||--||+|+++.++.+. ..+.+++|++| ..++++++++.
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHH
Confidence 356788999999999999999987 47899999999 99999998875
No 419
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.51 E-value=1.9 Score=39.24 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=59.0
Q ss_pred CCCCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
+..++|.+||+| ++.+++.+.+. ..+|+++|.+++.++.+++. + +. ...|..+.+....+..|+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-G----------~~-~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-G----------FD-VSADLEATLQRAAAEDAL 71 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-T----------CC-EESCHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-C----------Ce-eeCCHHHHHHhcccCCCE
Confidence 445789999998 45566766664 35799999999988877653 1 11 234555555432234799
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++..+. . ...+.++. +... +|+. +++..
T Consensus 72 VilavP~--------~-~~~~vl~~-l~~~-~~~~-iv~Dv 100 (341)
T 3ktd_A 72 IVLAVPM--------T-AIDSLLDA-VHTH-APNN-GFTDV 100 (341)
T ss_dssp EEECSCH--------H-HHHHHHHH-HHHH-CTTC-CEEEC
T ss_pred EEEeCCH--------H-HHHHHHHH-HHcc-CCCC-EEEEc
Confidence 9998652 1 13466676 5554 6664 45554
No 420
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.50 E-value=1.1 Score=35.41 Aligned_cols=98 Identities=22% Similarity=0.167 Sum_probs=54.4
Q ss_pred CCCCeEEEEccch-hHH-HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcc-CCC
Q 022451 101 PNPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR-KES 175 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~--~~l~~~-~~~ 175 (297)
....+|+++|+|. |.. +..+.+. ..+|+++|.+++.++.+++ ...+.++.+|.. +.+... -..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCccc
Confidence 4568999999874 322 3444333 3589999999876543331 123445666642 234332 246
Q ss_pred ceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 176 yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+|+|+....++. ....... +.+.+.+...++....
T Consensus 85 ad~Vi~~~~~~~---------~~~~~~~-~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 85 ADMVFAFTNDDS---------TNFFISM-NARYMFNVENVIARVY 119 (155)
T ss_dssp CSEEEECSSCHH---------HHHHHHH-HHHHTSCCSEEEEECS
T ss_pred CCEEEEEeCCcH---------HHHHHHH-HHHHHCCCCeEEEEEC
Confidence 999998764311 1122222 2345566666666543
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.33 E-value=6.8 Score=33.35 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=49.7
Q ss_pred CCCCeEEEEccchh-----HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HH
Q 022451 101 PNPKTIFIMGGGEG-----STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------EL 169 (297)
Q Consensus 101 ~~~~~VL~iG~G~G-----~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~------~l 169 (297)
...+.||+.|++++ .+++.+++. ..+|.+++.++...+.+++..... ...++.++..|..+ ++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHH
Confidence 35688999997632 245666664 468999999876666555543322 22478888888632 22
Q ss_pred hc---cCCCceEEEEcCC
Q 022451 170 ES---RKESYDVIIGDLA 184 (297)
Q Consensus 170 ~~---~~~~yD~Ii~D~~ 184 (297)
+. .-.+.|+++..+.
T Consensus 79 ~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhCCeeEEEEccc
Confidence 21 2247899999875
No 422
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.22 E-value=8.6 Score=33.48 Aligned_cols=76 Identities=20% Similarity=0.356 Sum_probs=47.0
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHH-HHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEE-VVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~-vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++. ..+.+.+..... ..++.++..|..+. +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHH
Confidence 46789999976542 34555554 468999998865 333333333221 35788888887432 21
Q ss_pred --ccCCCceEEEEcCC
Q 022451 171 --SRKESYDVIIGDLA 184 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~ 184 (297)
..-++.|+++..+.
T Consensus 119 ~~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 12257899999865
No 423
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.20 E-value=7.6 Score=34.62 Aligned_cols=109 Identities=15% Similarity=0.220 Sum_probs=57.9
Q ss_pred CCCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHH-HHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~-a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+.+|.+||+|. +.++..++......+|..+|++++..+. +....... .+....+++..+|. +-+ +..|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~~-~al----~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK--VFAPKPVDIWHGDY-DDC----RDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT--TSSSSCCEEEECCG-GGT----TTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh--hhcCCCeEEEcCcH-HHh----CCCCE
Confidence 457899999973 2344444443334689999999985553 22221111 11123556665442 222 45899
Q ss_pred EEEcCCCCCCCCC-ccCcc------cHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGP-CYKLY------TKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p-~~~L~------t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|++-...+...+. ...+. -.++.+. +.+. .|++++++-+
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~a~~iv~t 123 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVES-VMAS-GFQGLFLVAT 123 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHH-HHHH-TCCSEEEECS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHH-HHHH-CCCCEEEEeC
Confidence 9998764432111 01111 1234444 3444 5999876643
No 424
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.20 E-value=2.1 Score=36.57 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=54.1
Q ss_pred CeEEEEccch--hHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 104 KTIFIMGGGE--GSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+|.+||+|. +.++..+++.. +..+|+++|.+++-.+.+++.++ ++ ...|..+.+. ..|+|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g----------~~-~~~~~~e~~~----~aDvV 67 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG----------LT-TTTDNNEVAK----NADIL 67 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC----------CE-ECSCHHHHHH----HCSEE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC----------CE-EeCChHHHHH----hCCEE
Confidence 4799999983 34566666541 22489999999988776654332 12 2344445443 37999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
++-.+. . ...+.++. +...|+++.+++.
T Consensus 68 ilav~~-~--------~~~~v~~~-l~~~l~~~~~vvs 95 (247)
T 3gt0_A 68 ILSIKP-D--------LYASIINE-IKEIIKNDAIIVT 95 (247)
T ss_dssp EECSCT-T--------THHHHC----CCSSCTTCEEEE
T ss_pred EEEeCH-H--------HHHHHHHH-HHhhcCCCCEEEE
Confidence 998742 1 12355666 6788888876653
No 425
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.12 E-value=2.3 Score=37.82 Aligned_cols=97 Identities=14% Similarity=0.279 Sum_probs=61.7
Q ss_pred CCCCeEEEEccc--hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
..-++|.+||+| ++.++..++ . .-+|+++|.+++.++.+++.+ .... -.++++. .|..+ + ...|+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l--~~~~--~~~i~~~-~~~~~-~----~~aDl 76 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQI--PEEL--LSKIEFT-TTLEK-V----KDCDI 76 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHS--CGGG--GGGEEEE-SSCTT-G----GGCSE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHH--HHHH--hCCeEEe-CCHHH-H----cCCCE
Confidence 345899999999 455677777 4 358999999999999887762 1000 0134422 33322 2 34799
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
||...++.. -....+|.. +... |+.+++.|+.
T Consensus 77 Vieavpe~~-------~vk~~l~~~-l~~~--~~~IlasntS 108 (293)
T 1zej_A 77 VMEAVFEDL-------NTKVEVLRE-VERL--TNAPLCSNTS 108 (293)
T ss_dssp EEECCCSCH-------HHHHHHHHH-HHTT--CCSCEEECCS
T ss_pred EEEcCcCCH-------HHHHHHHHH-HhcC--CCCEEEEECC
Confidence 999876421 123467777 5555 8888888863
No 426
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.10 E-value=0.075 Score=60.66 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=0.0
Q ss_pred eEEEEccchhHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--------
Q 022451 105 TIFIMGGGEGSTAREILRHKT-----VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-------- 171 (297)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~-------- 171 (297)
+||+||.|+|..+..+++... ..+.+..|+++...+.|++.|.... +..
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d------------------i~~~~~d~~~~ 1304 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH------------------VTQGQWDPANP 1304 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT------------------EEEECCCSSCC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc------------------ccccccccccc
Q ss_pred ---cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 172 ---RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 172 ---~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
....||+|+..-.-+...... +.++. +++.|+|||.+++
T Consensus 1305 ~~~~~~~ydlvia~~vl~~t~~~~------~~l~~-~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1305 APGSLGKADLLVCNCALATLGDPA------VAVGN-MAATLKEGGFLLL 1346 (2512)
T ss_dssp CC-----CCEEEEECC---------------------------CCEEEE
T ss_pred ccCCCCceeEEEEcccccccccHH------HHHHH-HHHhcCCCcEEEE
No 427
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=88.02 E-value=8.5 Score=33.68 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=52.8
Q ss_pred cCccccccCChhhHHHHHHHHHHhcCCCCCeEEEEccchhHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC
Q 022451 75 DGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA 152 (297)
Q Consensus 75 dg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~ 152 (297)
||.+...+.|..-+.+.+.. ....+..+++|+||+|+.+-+ ..+++ .+..+|+++..+++-.+...+.+....
T Consensus 99 dG~l~G~NTD~~Gf~~~L~~--~g~~~~~~~~lilGaGGaarai~~aL~~-~g~~~i~i~nRt~~ra~~la~~~~~~~-- 173 (269)
T 3tum_A 99 DGRLLGDNVDGAGFLGAAHK--HGFEPAGKRALVIGCGGVGSAIAYALAE-AGIASITLCDPSTARMGAVCELLGNGF-- 173 (269)
T ss_dssp TSCEEEECCHHHHHHHHHHH--TTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCHHHHHHHHHHHHHHC--
T ss_pred CCEEEEEEcChHHHHHHHHH--hCCCcccCeEEEEecHHHHHHHHHHHHH-hCCCeEEEeCCCHHHHHHHHHHHhccC--
Confidence 45555555554444444432 122356789999999876543 33444 457899999998765544333333211
Q ss_pred CCCCCeEEEEcchHHHHhccCCCceEEEEcCC
Q 022451 153 FSDPRLELVINDARAELESRKESYDVIIGDLA 184 (297)
Q Consensus 153 ~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D~~ 184 (297)
+...+.. + ....+.||+|+...+
T Consensus 174 ---~~~~~~~-~-----~~~~~~~dliiNaTp 196 (269)
T 3tum_A 174 ---PGLTVST-Q-----FSGLEDFDLVANASP 196 (269)
T ss_dssp ---TTCEEES-C-----CSCSTTCSEEEECSS
T ss_pred ---Ccceehh-h-----hhhhhcccccccCCc
Confidence 1222211 1 012356999988765
No 428
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.85 E-value=7.8 Score=34.92 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=57.5
Q ss_pred CCCCeEEEEccch-h-HHHHHHHhcCCCcEEEEEECCHHHHHHHH----hhhhhccCCCCCCCeEEEEcchHHHHhccCC
Q 022451 101 PNPKTIFIMGGGE-G-STAREILRHKTVEKVVMCDIDEEVVEFCK----SYLVVNKEAFSDPRLELVINDARAELESRKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~----~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~ 174 (297)
..+.+|.+||+|. | .++..++...-..+|..+|++++.++... .-++.. ..++++..+|.. -+ +
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~-a~----~ 72 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYE-DC----K 72 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGG-GG----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHH-Hh----C
Confidence 3467899999863 2 23344444332358999999998665421 112221 134666666632 22 4
Q ss_pred CceEEEEcCCCCCCCCC-ccCcc--c----HHHHHHHHcccCCCCcEEEEecC
Q 022451 175 SYDVIIGDLADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 175 ~yD~Ii~D~~~~~~~~p-~~~L~--t----~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
..|+|++-...|...+. ...|+ + ++..+. +. ...|++++++-++
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~-I~-~~~p~a~vlvvtN 123 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSE-VM-ASGFDGIFLVATN 123 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHH-HH-HTTCCSEEEECSS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHH-HH-HhcCCeEEEEcCC
Confidence 58999997654431111 11122 1 122233 22 3579998776543
No 429
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.69 E-value=7.7 Score=36.86 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC--------CCCCeEEEEcchHHHHh
Q 022451 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF--------SDPRLELVINDARAELE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f-~~~~~~~--------~~~rv~~~~~Da~~~l~ 170 (297)
..-+|.+||+|. +.++..+++. ..+|+++|+|++.++..++.- +.....+ ...++++ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 456899999994 3345555553 357999999999998877642 1100000 0123332 344433332
Q ss_pred ccCCCceEEEEcCCCCCCC-CCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 171 SRKESYDVIIGDLADPIEG-GPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~~-~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
..|+||+..+.|... +.+..-+..+.++. +.+.|+++-+++..
T Consensus 84 ----~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 84 ----HGDVQFIAVGTPPDEDGSADLQYVLAAARN-IGRYMTGFKVIVDK 127 (478)
T ss_dssp ----HCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEEC
T ss_pred ----cCCEEEEEeCCCcccCCCccHHHHHHHHHH-HHHhcCCCCEEEEe
Confidence 479999998765321 11122344566777 67889987766544
No 430
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.55 E-value=5.5 Score=30.71 Aligned_cols=67 Identities=25% Similarity=0.300 Sum_probs=40.6
Q ss_pred CCCeEEEEccchhHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEE-EEcchHHHHhccCCCce
Q 022451 102 NPKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELESRKESYD 177 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~-~~~Da~~~l~~~~~~yD 177 (297)
.+++|++||+| .++..+++. .+ .+|++++.+++-.+...+.++ ..+ ...|..+.+. .+|
T Consensus 20 ~~~~v~iiG~G--~iG~~~a~~l~~~g-~~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~----~~D 82 (144)
T 3oj0_A 20 GGNKILLVGNG--MLASEIAPYFSYPQ-YKVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK----NND 82 (144)
T ss_dssp CCCEEEEECCS--HHHHHHGGGCCTTT-CEEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH----TCS
T ss_pred cCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc----CCC
Confidence 37899999985 444444432 33 459999999887654333222 122 2344444443 489
Q ss_pred EEEEcCCC
Q 022451 178 VIIGDLAD 185 (297)
Q Consensus 178 ~Ii~D~~~ 185 (297)
+|+.-.+.
T Consensus 83 ivi~at~~ 90 (144)
T 3oj0_A 83 VIITATSS 90 (144)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCC
Confidence 99987654
No 431
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.55 E-value=2.9 Score=34.41 Aligned_cols=67 Identities=16% Similarity=0.215 Sum_probs=42.8
Q ss_pred eEEEEccchhHHH----HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 105 TIFIMGGGEGSTA----REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 105 ~VL~iG~G~G~~~----~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+||+.|+ +|.++ ++|++. ..+|+++..++.-.... ..++++++.+|..+.-...-+..|+||
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~d~vi 67 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRR--GHEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEADLDSVDAVV 67 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHHHTTCSEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHC--CCEEEEEEecccccccc-----------cCCCceEEecccccccHhhcccCCEEE
Confidence 5899985 34444 444443 46899999988654321 125788999997543111124689999
Q ss_pred EcCCC
Q 022451 181 GDLAD 185 (297)
Q Consensus 181 ~D~~~ 185 (297)
+.+..
T Consensus 68 ~~ag~ 72 (224)
T 3h2s_A 68 DALSV 72 (224)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 88764
No 432
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.38 E-value=12 Score=35.22 Aligned_cols=108 Identities=17% Similarity=0.155 Sum_probs=61.2
Q ss_pred CeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCC--------CCCCeEEEEcchHHHHhcc
Q 022451 104 KTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAF--------SDPRLELVINDARAELESR 172 (297)
Q Consensus 104 ~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~-~~~~~~--------~~~rv~~~~~Da~~~l~~~ 172 (297)
.+|.+||+|.= .++..+++. ..+|+++|+|++.++..++... .....+ ...++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 47999999843 344555554 3589999999999887766311 000000 0123442 34544444
Q ss_pred CCCceEEEEcCCCCCCC-CCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 173 KESYDVIIGDLADPIEG-GPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~-~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+..|+||+..+.|... +.+..-+-.+.++. +.+.|+++-+++..+
T Consensus 77 -~~aDvViiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -PEADIIFIAVGTPAGEDGSADMSYVLDAARS-IGRAMSRYILIVTKS 122 (450)
T ss_dssp -GGCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred -hcCCEEEEEcCCCcccCCCcChHHHHHHHHH-HHhhCCCCCEEEEee
Confidence 3479999988755311 11111133456666 677888876665544
No 433
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.38 E-value=1.9 Score=37.65 Aligned_cols=89 Identities=25% Similarity=0.198 Sum_probs=55.1
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
.+|.+||+|. +.++..+.+.....+|+++|.+++..+.+++. +.. . ....|..+.+ +..|+|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~------~---~~~~~~~~~~----~~aDvVil 72 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIV------D---EATADFKVFA----ALADVIIL 72 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSC------S---EEESCTTTTG----GGCSEEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCc------c---cccCCHHHhh----cCCCEEEE
Confidence 5899999984 34455555543245899999999888766552 110 0 1223322222 35799999
Q ss_pred cCCCCCCCCCccCcccHHHHHHHHccc-CCCCcEEE
Q 022451 182 DLADPIEGGPCYKLYTKSFYEFVVKPR-LNPEGIFV 216 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~-L~pgGvl~ 216 (297)
..+.. . ..+.++. +... |+++.+++
T Consensus 73 avp~~-------~--~~~v~~~-l~~~~l~~~~ivi 98 (290)
T 3b1f_A 73 AVPIK-------K--TIDFIKI-LADLDLKEDVIIT 98 (290)
T ss_dssp CSCHH-------H--HHHHHHH-HHTSCCCTTCEEE
T ss_pred cCCHH-------H--HHHHHHH-HHhcCCCCCCEEE
Confidence 86521 1 2567777 6777 88876655
No 434
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=87.27 E-value=1.5 Score=38.18 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH----------
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---------- 168 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---------- 168 (297)
.++.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+... ...++.++..|..+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHH
Confidence 56788988876542 34555554 468999999988776655544322 235788898887443
Q ss_pred HhccCCCceEEEEcCC
Q 022451 169 LESRKESYDVIIGDLA 184 (297)
Q Consensus 169 l~~~~~~yD~Ii~D~~ 184 (297)
+....++.|++|..+.
T Consensus 85 ~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 85 IKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1112257999999875
No 435
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.21 E-value=4.1 Score=36.74 Aligned_cols=105 Identities=10% Similarity=0.113 Sum_probs=64.1
Q ss_pred CCCCeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc------cCCCCC--------CCeEEEEcc
Q 022451 101 PNPKTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KEAFSD--------PRLELVIND 164 (297)
Q Consensus 101 ~~~~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~------~~~~~~--------~rv~~~~~D 164 (297)
+...+|.+||+|+= +++..++.. ..+|+.+|++++.++.++++.... ...+.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 45678999999843 345555554 467999999999988877654311 111110 12222 223
Q ss_pred hHHHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 165 ARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 165 a~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
..+.+ +..|+|+=..+. .--..++.|+. +.+.++|+-+|+.|+.
T Consensus 81 l~~a~----~~ad~ViEav~E-------~l~iK~~lf~~-l~~~~~~~aIlaSNTS 124 (319)
T 3ado_A 81 LAEAV----EGVVHIQECVPE-------NLDLKRKIFAQ-LDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHHHT----TTEEEEEECCCS-------CHHHHHHHHHH-HHTTCCSSSEEEECCS
T ss_pred hHhHh----ccCcEEeecccc-------HHHHHHHHHHH-HHHHhhhcceeehhhh
Confidence 22222 347888855442 11235688999 8999999999999974
No 436
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.13 E-value=6.8 Score=36.95 Aligned_cols=108 Identities=17% Similarity=0.195 Sum_probs=58.4
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCC----C---CCCCeEEEEcchHHHHhccC
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEA----F---SDPRLELVINDARAELESRK 173 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f-~~~~~~----~---~~~rv~~~~~Da~~~l~~~~ 173 (297)
.+|.+||+|. +.++..+++..+..+|+++|++++.++..++.- +..... . ...++++ ..|..+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 4799999984 334566666432458999999999887654421 000000 0 0012332 344433343
Q ss_pred CCceEEEEcCCCCCCCCC-----ccCc-ccHHHHHHHHcccCCCCcEEEE
Q 022451 174 ESYDVIIGDLADPIEGGP-----CYKL-YTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 174 ~~yD~Ii~D~~~~~~~~p-----~~~L-~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
..|+|++..+.|..... ...+ +-.+..+. +.+.|++|.+++.
T Consensus 82 -~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~ 129 (467)
T 2q3e_A 82 -EADLVFISVNTPTKTYGMGKGRAADLKYIEACARR-IVQNSNGYKIVTE 129 (467)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHTCCSEEEEEE
T ss_pred -cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHH-HHhhCCCCCEEEE
Confidence 47999998875542110 0011 12355566 5678887665543
No 437
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=87.13 E-value=4.1 Score=36.53 Aligned_cols=76 Identities=12% Similarity=0.137 Sum_probs=49.1
Q ss_pred hcCCCCCeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCC
Q 022451 98 LHHPNPKTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKES 175 (297)
Q Consensus 98 ~~~~~~~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~ 175 (297)
+..++.+++++||+|.= ..++.+....+..+|.+++.+ ...++++++-...+ -++... |..+.++ .
T Consensus 116 La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g-----~~~~~~--~~~eav~----~ 183 (313)
T 3hdj_A 116 LARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCG-----VPARMA--APADIAA----Q 183 (313)
T ss_dssp HSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHT-----SCEEEC--CHHHHHH----H
T ss_pred hccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcC-----CeEEEe--CHHHHHh----h
Confidence 34567899999999842 334555554567899999999 66666665321111 123333 7766664 3
Q ss_pred ceEEEEcCCC
Q 022451 176 YDVIIGDLAD 185 (297)
Q Consensus 176 yD~Ii~D~~~ 185 (297)
.|+|+.-.+.
T Consensus 184 aDIVi~aT~s 193 (313)
T 3hdj_A 184 ADIVVTATRS 193 (313)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEccCC
Confidence 8999988664
No 438
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.03 E-value=11 Score=33.59 Aligned_cols=110 Identities=14% Similarity=0.268 Sum_probs=56.4
Q ss_pred CCCeEEEEccchhHHH--HHHHhcCCCcEEEEEECCHHHHHH-HHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 102 NPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~-a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+.+|.+||+|.-+.+ ..++......+|..+|++++.++. +...-.... +...++++..+| .+-+ +..|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~--~~~~~~~v~~~~-~~a~----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP--YSPTTVRVKAGE-YSDC----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGG--GSSSCCEEEECC-GGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhh--hcCCCeEEEeCC-HHHh----CCCCE
Confidence 4568999999754432 333333224689999999865543 222111110 111345555544 2223 34899
Q ss_pred EEEcCCCCCCCCCc-cC--cccHHHHHHH---HcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPC-YK--LYTKSFYEFV---VKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~-~~--L~t~ef~~~~---~~~~L~pgGvl~~~~ 219 (297)
|++-...|...+.. .. ..+...++.+ +.+. .|++++++-+
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 99887655421110 01 1111233331 2333 8999988754
No 439
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.96 E-value=5.5 Score=35.60 Aligned_cols=106 Identities=25% Similarity=0.260 Sum_probs=55.9
Q ss_pred eEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 105 ~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+|.+||+|.=+ ++..++......+|+.+|++++.++.....+....... ...++...|. +.+ +..|+|++-
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~--~~~~i~~~d~-~~~----~~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT--RRANIYAGDY-ADL----KGSDVVIVA 74 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS--CCCEEEECCG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhc--CCcEEEeCCH-HHh----CCCCEEEEc
Confidence 68999997433 34444443223489999999987765443221100001 2334444452 222 458999998
Q ss_pred CCCCCCCCC-ccCcc------cHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGP-CYKLY------TKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p-~~~L~------t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...+...+. ...|. -++.++. +.+. .|++++++-+
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~~~~~ii~~t 116 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARN-VSKY-APDSIVIVVT 116 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHH-HHHH-CTTCEEEECS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHhh-CCCeEEEEeC
Confidence 875431110 00111 1355555 4444 5899876643
No 440
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.89 E-value=4.9 Score=35.32 Aligned_cols=102 Identities=18% Similarity=0.291 Sum_probs=62.1
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh------ccCCCCC------------CCeEEEE
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV------NKEAFSD------------PRLELVI 162 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~------~~~~~~~------------~rv~~~~ 162 (297)
-++|.+||+|. +.++..+++. ..+|+++|.+++.++.+++.+.. ....+.. .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 46899999984 3356666654 35899999999988876553221 0000100 13333 2
Q ss_pred cchHHHHhccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 163 NDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 163 ~Da~~~l~~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.|..+.+ ...|+||...+... . ...++++. +...++|+.+++.++
T Consensus 92 ~~~~~~~----~~aD~Vi~avp~~~------~-~~~~v~~~-l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV----HSTDLVVEAIVENL------K-VKNELFKR-LDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT----TSCSEEEECCCSCH------H-HHHHHHHH-HTTTSCTTCEEEECC
T ss_pred cCHHHhh----cCCCEEEEcCcCcH------H-HHHHHHHH-HHhhCCCCeEEEECC
Confidence 3433222 45899999875311 1 13467888 788899888877664
No 441
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.67 E-value=3.2 Score=35.16 Aligned_cols=76 Identities=22% Similarity=0.280 Sum_probs=50.7
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+.+.+.+... .+++.++..|..+. +.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999976542 45555554 468999999998877665544322 35788888887432 21
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
..-++.|+++..+.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247999999875
No 442
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.64 E-value=3.6 Score=36.93 Aligned_cols=76 Identities=29% Similarity=0.391 Sum_probs=49.3
Q ss_pred CCCCeEEEEccchhHHHHH----HHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhccCC
Q 022451 101 PNPKTIFIMGGGEGSTARE----ILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKE 174 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~----l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~--l~~~~~ 174 (297)
-..++||+.|+ +|.++.. +++.++..+|++++.++.-....++.+. .++++++.+|.++. +...-+
T Consensus 19 ~~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 19 LDNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHHTT
T ss_pred hCCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHHHh
Confidence 35688999985 4555444 4443233489999999876554443321 36799999998643 333234
Q ss_pred CceEEEEcCC
Q 022451 175 SYDVIIGDLA 184 (297)
Q Consensus 175 ~yD~Ii~D~~ 184 (297)
..|+||+.+.
T Consensus 91 ~~D~Vih~Aa 100 (344)
T 2gn4_A 91 GVDICIHAAA 100 (344)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEECCC
Confidence 6899999875
No 443
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.53 E-value=4 Score=34.39 Aligned_cols=76 Identities=12% Similarity=0.168 Sum_probs=50.5
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~------~l~-- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+...+.+... ..++.++..|..+ +++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 46788998876542 45555554 468999999998776655544322 3578888888633 222
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
....+.|+++..+.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 23357899999875
No 444
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.33 E-value=3 Score=35.62 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=50.9
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---------H
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---------L 169 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~---------l 169 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+... ..++.++..|..+. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHH
Confidence 56789999977553 44555554 468999999988776665544322 35788888886321 2
Q ss_pred hccCCCceEEEEcCC
Q 022451 170 ESRKESYDVIIGDLA 184 (297)
Q Consensus 170 ~~~~~~yD~Ii~D~~ 184 (297)
... .+.|+++..+.
T Consensus 79 ~~~-g~id~lv~nAg 92 (252)
T 3h7a_A 79 DAH-APLEVTIFNVG 92 (252)
T ss_dssp HHH-SCEEEEEECCC
T ss_pred Hhh-CCceEEEECCC
Confidence 223 67999999876
No 445
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=86.23 E-value=6.7 Score=32.88 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=48.5
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch--------HHHHh
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--------RAELE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da--------~~~l~ 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+... ..+++.++..|. ..+++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHH
Confidence 46788888875442 34555554 468999999998877666655432 125566776665 12222
Q ss_pred ---ccCCCceEEEEcCC
Q 022451 171 ---SRKESYDVIIGDLA 184 (297)
Q Consensus 171 ---~~~~~yD~Ii~D~~ 184 (297)
..-++.|+++..+.
T Consensus 87 ~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 12247999999875
No 446
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.20 E-value=12 Score=31.99 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=51.5
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+.+.+.+... ..++.++..|..+. +.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56889999987653 45566654 468999999988776665544322 35788888886432 21
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
..-.+.|+++..+.
T Consensus 83 ~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 83 MKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 12357999999874
No 447
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.19 E-value=8.8 Score=32.51 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=49.2
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch--H------HHH-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--R------AEL- 169 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da--~------~~l- 169 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+.+.+.+.... ..++.++..|. . +.+
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHH
Confidence 46789999976542 34555554 4689999999887776655443221 23677777776 1 122
Q ss_pred --hccCCCceEEEEcCC
Q 022451 170 --ESRKESYDVIIGDLA 184 (297)
Q Consensus 170 --~~~~~~yD~Ii~D~~ 184 (297)
...-++.|+++..+.
T Consensus 85 ~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHCSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 122357999999875
No 448
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.90 E-value=5.4 Score=38.25 Aligned_cols=89 Identities=13% Similarity=0.218 Sum_probs=54.4
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
..+++|+++|+|. |......++..+ .+|+++|.++.-.+.|++. + +++ .+..+.+ ...|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~-G----------a~~--~~l~e~l----~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME-G----------FDV--VTVEEAI----GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-T----------CEE--CCHHHHG----GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-C----------CEE--ecHHHHH----hCCCEE
Confidence 5688999999873 333344444444 5899999999887777653 1 111 2333333 358999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+..... ..++..+. .+.+++||+++ |.+
T Consensus 334 i~atgt-------~~~i~~~~-----l~~mk~ggilv-nvG 361 (494)
T 3ce6_A 334 VTATGN-------KDIIMLEH-----IKAMKDHAILG-NIG 361 (494)
T ss_dssp EECSSS-------SCSBCHHH-----HHHSCTTCEEE-ECS
T ss_pred EECCCC-------HHHHHHHH-----HHhcCCCcEEE-EeC
Confidence 986421 23444333 34578999875 554
No 449
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.87 E-value=2.4 Score=34.78 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=41.6
Q ss_pred eEEEEccchhHH----HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 105 TIFIMGGGEGST----AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 105 ~VL~iG~G~G~~----~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
+||+.|+. |.+ ++.|++. ..+|+++..++.-.+.. . ++++++.+|..+.-...-+..|+||
T Consensus 2 kvlVtGat-G~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-----------~-~~~~~~~~D~~d~~~~~~~~~d~vi 66 (221)
T 3ew7_A 2 KIGIIGAT-GRAGSRILEEAKNR--GHEVTAIVRNAGKITQT-----------H-KDINILQKDIFDLTLSDLSDQNVVV 66 (221)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESCSHHHHHH-----------C-SSSEEEECCGGGCCHHHHTTCSEEE
T ss_pred eEEEEcCC-chhHHHHHHHHHhC--CCEEEEEEcCchhhhhc-----------c-CCCeEEeccccChhhhhhcCCCEEE
Confidence 68999853 444 3444443 36899999987653321 1 4688899987543111124689999
Q ss_pred EcCCC
Q 022451 181 GDLAD 185 (297)
Q Consensus 181 ~D~~~ 185 (297)
+.+..
T Consensus 67 ~~ag~ 71 (221)
T 3ew7_A 67 DAYGI 71 (221)
T ss_dssp ECCCS
T ss_pred ECCcC
Confidence 88764
No 450
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.81 E-value=5.9 Score=37.59 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=52.8
Q ss_pred CCCCeEEEEccch-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
-.+++|+++|+|. |......++.. ..+|+++|+||.-...+... .+++ .+..+.+ ...|+|
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~~~-----------G~~v--v~LeElL----~~ADIV 306 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGA-GARVKVTEVDPICALQAAMD-----------GFEV--VTLDDAA----STADIV 306 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHT-----------TCEE--CCHHHHG----GGCSEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHHhc-----------Ccee--ccHHHHH----hhCCEE
Confidence 4689999999985 33333334434 36899999999754433321 1222 2333334 357998
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCC
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~ 221 (297)
+... + ...+++.+.|+. +++|+++ +|++.
T Consensus 307 v~at------g-t~~lI~~e~l~~-----MK~GAIL-INvGR 335 (464)
T 3n58_A 307 VTTT------G-NKDVITIDHMRK-----MKDMCIV-GNIGH 335 (464)
T ss_dssp EECC------S-SSSSBCHHHHHH-----SCTTEEE-EECSS
T ss_pred EECC------C-CccccCHHHHhc-----CCCCeEE-EEcCC
Confidence 8642 1 135667666554 5666655 68753
No 451
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.68 E-value=1.2 Score=39.74 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=54.2
Q ss_pred eEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhc-cCCCceEEE
Q 022451 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES-RKESYDVII 180 (297)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da-~~~l~~-~~~~yD~Ii 180 (297)
+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .+ +-..|. .+.++. ....+|+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~-------~~-i~~~~~~~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GAK-------EV-LAREDVMAERIRPLDKQRWAAAV 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TCS-------EE-EECC---------CCSCCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CCc-------EE-EecCCcHHHHHHHhcCCcccEEE
Confidence 8999996 56667778887665 5799999998888888763 211 00 101111 111221 234699987
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
-.... + .++. +.+.|+++|.++.-.
T Consensus 222 d~~g~-----~--------~~~~-~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 222 DPVGG-----R--------TLAT-VLSRMRYGGAVAVSG 246 (328)
T ss_dssp ECSTT-----T--------THHH-HHHTEEEEEEEEECS
T ss_pred ECCcH-----H--------HHHH-HHHhhccCCEEEEEe
Confidence 54321 1 1344 567899999997653
No 452
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.39 E-value=4.2 Score=35.77 Aligned_cols=77 Identities=22% Similarity=0.281 Sum_probs=51.8
Q ss_pred CCCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 022451 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~ 171 (297)
-..+.||+.|+++|. +++.+++. ..+|.+++.++.-++.+.+.+... ..++.++..|..+. ++.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHH
Confidence 356889999976552 34555554 468999999998887766655432 25788888886432 211
Q ss_pred ---cCCCceEEEEcCC
Q 022451 172 ---RKESYDVIIGDLA 184 (297)
Q Consensus 172 ---~~~~yD~Ii~D~~ 184 (297)
...+.|++|..+.
T Consensus 102 ~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHSSCSEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 1247999999876
No 453
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.20 E-value=3.8 Score=35.38 Aligned_cols=87 Identities=18% Similarity=0.138 Sum_probs=54.2
Q ss_pred eEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 105 TIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 105 ~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+|.+||+|. +.++..+.+. + .+|+++|.+++.++.++++ +.. . + ...|.. .. ...|+|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g-~~V~~~~~~~~~~~~~~~~-g~~------~--~-~~~~~~----~~-~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-G-HYLIGVSRQQSTCEKAVER-QLV------D--E-AGQDLS----LL-QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHT-TSC------S--E-EESCGG----GG-TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHhC-CCC------c--c-ccCCHH----Hh-CCCCEEEEE
Confidence 689999984 3345555554 2 4899999999887766542 110 1 1 223422 22 468999998
Q ss_pred CCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
.+.. ...+.++. +...++++.++ ++.
T Consensus 65 v~~~---------~~~~~~~~-l~~~~~~~~~v-v~~ 90 (279)
T 2f1k_A 65 TPIQ---------LILPTLEK-LIPHLSPTAIV-TDV 90 (279)
T ss_dssp SCHH---------HHHHHHHH-HGGGSCTTCEE-EEC
T ss_pred CCHH---------HHHHHHHH-HHhhCCCCCEE-EEC
Confidence 6521 23467777 67888887765 454
No 454
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.14 E-value=4.6 Score=36.07 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=57.7
Q ss_pred CeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh--ccCCCC-CCCeEEEEcchHHHHhccCCCceE
Q 022451 104 KTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV--NKEAFS-DPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 104 ~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~--~~~~~~-~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+|++||+|.- .++..+.+. ..+|++++.+++.++..++.... ...... ..++.....|..+.+ +.+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCCE
Confidence 58999999852 344555543 35799999999887766554221 110000 001112334544433 35899
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEE
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~ 217 (297)
|++..+.. . ..+.++. +...|+++.+++.
T Consensus 79 vi~~v~~~-------~--~~~~~~~-l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 79 ILIVVPAI-------H--HASIAAN-IASYISEGQLIIL 107 (359)
T ss_dssp EEECSCGG-------G--HHHHHHH-HGGGCCTTCEEEE
T ss_pred EEEeCCch-------H--HHHHHHH-HHHhCCCCCEEEE
Confidence 99986532 1 2577788 7888998775543
No 455
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.14 E-value=9.1 Score=33.54 Aligned_cols=90 Identities=13% Similarity=0.148 Sum_probs=51.3
Q ss_pred CCCCeEEEEccchh-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-~Da~~~l~~~~~~yD~ 178 (297)
..+++|++||+|.= ......++..+ .+|+++|.++.-.+.++++ + ++.+. .+..+.+ ...|+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~-g----------~~~~~~~~l~~~l----~~aDv 216 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALG-AKVKVGARESDLLARIAEM-G----------MEPFHISKAAQEL----RDVDV 216 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-T----------SEEEEGGGHHHHT----TTCSE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHC-C----------CeecChhhHHHHh----cCCCE
Confidence 45789999998732 22222333343 4899999998765544431 1 22221 2322322 46999
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|+...+. .+...+.+ +.++|++++ +|+.
T Consensus 217 Vi~~~p~--------~~i~~~~l-----~~mk~~~~l-in~a 244 (293)
T 3d4o_A 217 CINTIPA--------LVVTANVL-----AEMPSHTFV-IDLA 244 (293)
T ss_dssp EEECCSS--------CCBCHHHH-----HHSCTTCEE-EECS
T ss_pred EEECCCh--------HHhCHHHH-----HhcCCCCEE-EEec
Confidence 9998642 34444433 356787766 5653
No 456
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.96 E-value=9 Score=33.92 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=52.2
Q ss_pred eEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEEc
Q 022451 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (297)
Q Consensus 105 ~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~D 182 (297)
+|.+||+|.-+ ++..++......+|..+|++++.++.....+.... .+. ...++...|. +-+ +..|+|+.-
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~-~~~~i~~~~~-~a~----~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PVS-HGTRVWHGGH-SEL----ADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CTT-SCCEEEEECG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hhc-CCeEEEECCH-HHh----CCCCEEEEc
Confidence 68999987433 33444443223489999999986653222121110 111 3344444452 222 357999998
Q ss_pred CCCCCCCCC-ccCcc------cHHHHHHHHcccCCCCcEEEEec
Q 022451 183 LADPIEGGP-CYKLY------TKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 183 ~~~~~~~~p-~~~L~------t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
...|...+. ...+. -++.++. +.+. .|++++++-+
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~~~vi~~t 116 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQ-ITRA-APDAVLLVTS 116 (304)
T ss_dssp C------------CHHHHHHHHHHHHHH-HHHH-CSSSEEEECS
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHH-HHHh-CCCeEEEEec
Confidence 753321110 01111 1345555 4554 6999887643
No 457
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.81 E-value=14 Score=33.36 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=57.7
Q ss_pred CCCCCeEEEEccchh-H-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 100 HPNPKTIFIMGGGEG-S-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G-~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
...+.+|.++|+|.= . ++..++...-..++..+|++++.++--..-+.... .+. .++++..+|-.. + +..|
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a-~----~~aD 78 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD-A----KDAD 78 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG-G----TTCS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH-h----cCCC
Confidence 356789999998632 2 33444443333589999999886653322222110 011 356666665322 2 4589
Q ss_pred EEEEcCCCCCCC-CCccCcc------cHHHHHHHHcccCCCCcEEEEecC
Q 022451 178 VIIGDLADPIEG-GPCYKLY------TKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 178 ~Ii~D~~~~~~~-~p~~~L~------t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
+|++-+..|... +....|+ -+++.+. +.+ ..|++++++-++
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~-i~~-~~p~a~ilvvtN 126 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDP-IVD-SGFNGIFLVAAN 126 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHH-HHT-TTCCSEEEECSS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHH-HHh-cCCceEEEEccC
Confidence 999876544311 1111222 1234444 333 579998876543
No 458
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.76 E-value=6.2 Score=35.29 Aligned_cols=109 Identities=16% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCCeEEEEccchhHH--HHHHHhcCCCcEEEEEECCHHHHHH-HHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceE
Q 022451 102 NPKTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~-a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~ 178 (297)
.+.+|.+||+|.=+. +..++......+|..+|++++.++. +.. +.... .+ ..++++..+| .+-+ +..|+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d-l~~~~-~~-~~~~~i~~~~-~~a~----~~aDv 77 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGL-PF-MGQMSLYAGD-YSDV----KDCDV 77 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSC-CC-TTCEEEC--C-GGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH-HHHhH-Hh-cCCeEEEECC-HHHh----CCCCE
Confidence 456899999864332 3333333334589999999865543 222 11110 11 1355665444 2222 45899
Q ss_pred EEEcCCCCCCCCCc-cC--ccc----HHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGPC-YK--LYT----KSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p~-~~--L~t----~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|++-...|...+.. .. ..+ ++..+. +.+. +|++++++-++
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQN-IMKY-YNHGVILVVSN 124 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHH-HHHH-CCSCEEEECSS
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHH-HHHh-CCCcEEEEecC
Confidence 99887654311110 01 111 233344 3333 79999887543
No 459
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.72 E-value=6.3 Score=33.82 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=48.2
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
..++||+.|+++|. +++.+++. ..+|.+++.++.-.+...+.+... ..++.++..|..+. +.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 46789999865442 33444443 468999999987666554433321 25788888886432 21
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
..-++.|+||..+.
T Consensus 103 ~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 103 KAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHTCCCSEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 12347999999875
No 460
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.66 E-value=1.8 Score=39.52 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=25.0
Q ss_pred CCCeEEEEccch-hHH-HHHHHhcCCCcEEEEEECCH
Q 022451 102 NPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 102 ~~~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 136 (297)
...+||++|+|+ |+. +..|+. .+..+++.||-|.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 367999999984 333 444444 5789999999875
No 461
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.62 E-value=3 Score=39.19 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=60.1
Q ss_pred CCCCeEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc-CCCCCCCeEEEE----cch------HH
Q 022451 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK-EAFSDPRLELVI----NDA------RA 167 (297)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~-~~~~~~rv~~~~----~Da------~~ 167 (297)
.++++||++|+ |.|.++.++++..+ .++++++.+++-.+.+++. +... ....++.+.+.. .|. .+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~l-Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAM-GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhh-CCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 45788999986 45667778887664 5888888999999999874 2110 000111110000 111 12
Q ss_pred HHhc--cCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 168 ELES--RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 168 ~l~~--~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
.+.. ....+|+|+-... .+.++. +.+.|+++|.++.-
T Consensus 305 ~i~~~t~g~g~Dvvid~~G-------------~~~~~~-~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPG-------------RETFGA-SVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHTSCCEEEEEECSC-------------HHHHHH-HHHHEEEEEEEEES
T ss_pred HHHHHhCCCCCcEEEEcCC-------------chhHHH-HHHHhhCCcEEEEE
Confidence 2222 2357998875321 134566 57899999998764
No 462
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.57 E-value=3.9 Score=34.90 Aligned_cols=77 Identities=25% Similarity=0.352 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-chh--H-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 022451 102 NPKTIFIMGG-GEG--S-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (297)
Q Consensus 102 ~~~~VL~iG~-G~G--~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~ 171 (297)
.++.||+.|+ |.| . +++.+++. ..+|.+++.++.-.+.+.+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 5678999987 433 2 45666664 468999999998777666554322 236889999887432 211
Q ss_pred ---cCCCceEEEEcCC
Q 022451 172 ---RKESYDVIIGDLA 184 (297)
Q Consensus 172 ---~~~~yD~Ii~D~~ 184 (297)
.-.+.|++|..+.
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 2247899999876
No 463
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.54 E-value=11 Score=34.20 Aligned_cols=98 Identities=19% Similarity=0.179 Sum_probs=60.5
Q ss_pred CCeEEEEccchh--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh----hccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 103 PKTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLV----VNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 103 ~~~VL~iG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~----~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
..+|.+||+|.= .++..+++. ..+|++++.+++.++..++.-. +++..+ .+++++ ..|..+.+ +..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~-t~d~~ea~----~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKA-YCDLKASL----EGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEE-ESCHHHHH----TTC
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEE-ECCHHHHH----hcC
Confidence 468999999843 344555543 3579999999998877665311 111111 234443 35554444 347
Q ss_pred eEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
|+|++-.+. . ..++.++. ++..|+++-+++..
T Consensus 101 DvVilaVp~--------~-~~~~vl~~-i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 101 TDILIVVPS--------F-AFHEVITR-MKPLIDAKTRIAWG 132 (356)
T ss_dssp CEEEECCCH--------H-HHHHHHHH-HGGGCCTTCEEEEC
T ss_pred CEEEECCCH--------H-HHHHHHHH-HHHhcCCCCEEEEE
Confidence 999987642 1 34577888 78899888766543
No 464
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=84.49 E-value=3.9 Score=34.15 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=46.5
Q ss_pred CeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHhccCC
Q 022451 104 KTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELESRKE 174 (297)
Q Consensus 104 ~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~------~l~~~~~ 174 (297)
+.||+.|+++|. +++.+++. ..+|.+++.++.-++.+.+.+ ..++.++..|..+ .+....+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred CEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHHhh
Confidence 468999976542 34555554 367999999998877665543 2456777777632 3344455
Q ss_pred CceEEEEcCC
Q 022451 175 SYDVIIGDLA 184 (297)
Q Consensus 175 ~yD~Ii~D~~ 184 (297)
.+|+++..+.
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799998875
No 465
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.48 E-value=4.9 Score=35.38 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=60.7
Q ss_pred CCCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
...+|.+||+|. ..++..+++. ..+|+++|.+++.++.+++. + ......|..+.+ +..|+|
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g----------~~~~~~~~~e~~----~~aDvv 68 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE-G----------ACGAAASAREFA----GVVDAL 68 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-T----------CSEEESSSTTTT----TTCSEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc-C----------CccccCCHHHHH----hcCCEE
Confidence 346899999983 3345556554 35899999999988776653 1 111233333322 457999
Q ss_pred EEcCCCCCCCCCccCcccHHHH---HHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 180 IGDLADPIEGGPCYKLYTKSFY---EFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~---~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
++..+++. ..++.+ +. +...|++|.+++ +... ......+.+.+.+.+
T Consensus 69 i~~vp~~~--------~~~~v~~~~~~-l~~~l~~g~ivv-~~st----~~~~~~~~~~~~~~~ 118 (303)
T 3g0o_A 69 VILVVNAA--------QVRQVLFGEDG-VAHLMKPGSAVM-VSST----ISSADAQEIAAALTA 118 (303)
T ss_dssp EECCSSHH--------HHHHHHC--CC-CGGGSCTTCEEE-ECSC----CCHHHHHHHHHHHHT
T ss_pred EEECCCHH--------HHHHHHhChhh-HHhhCCCCCEEE-ecCC----CCHHHHHHHHHHHHH
Confidence 99876421 012222 33 456778777664 5421 123344455555554
No 466
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.44 E-value=13 Score=32.22 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=51.6
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
+.|.+|+-|++.|. +++.+++. ..+|..++.+++-++.+.+.+... ..++..+..|..+. ++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56788888876653 34555554 478999999998887766655432 25788888886322 21
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
+.-++.|+++.++-
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 12367999999875
No 467
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.44 E-value=9.1 Score=33.63 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=51.3
Q ss_pred CCCCeEEEEccchhH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhccCCCceE
Q 022451 101 PNPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELESRKESYDV 178 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~-~Da~~~l~~~~~~yD~ 178 (297)
..+++|++||+|.=+ .....++..+ .+|+++|.++.-.+.++++ + ++.+. .+..+. -...|+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-g----------~~~~~~~~l~~~----l~~aDv 218 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALG-ANVKVGARSSAHLARITEM-G----------LVPFHTDELKEH----VKDIDI 218 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-T----------CEEEEGGGHHHH----STTCSE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHC-C----------CeEEchhhHHHH----hhCCCE
Confidence 457899999987422 2222233343 5899999998765544331 1 22221 232222 256899
Q ss_pred EEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
|+...+. .+.+.+ ..+.++|++++ +|+
T Consensus 219 Vi~~~p~--------~~i~~~-----~~~~mk~g~~l-in~ 245 (300)
T 2rir_A 219 CINTIPS--------MILNQT-----VLSSMTPKTLI-LDL 245 (300)
T ss_dssp EEECCSS--------CCBCHH-----HHTTSCTTCEE-EEC
T ss_pred EEECCCh--------hhhCHH-----HHHhCCCCCEE-EEE
Confidence 9998753 334433 23568888766 565
No 468
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.22 E-value=3.9 Score=34.45 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=46.5
Q ss_pred CCCeEEEEccchhHHH----HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 022451 102 NPKTIFIMGGGEGSTA----REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~~~----~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~- 170 (297)
..++||+.|++ |+++ +.+++. ..+|.+++.++.-.+...+.+... .+++.++..|..+. ++
T Consensus 10 ~~~~vlVtGas-ggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 10 DGKCAIITGAG-AGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQL-----GGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHH
Confidence 45788888864 4444 444443 468999999987665444433321 25688888886432 11
Q ss_pred --ccCCCceEEEEcCC
Q 022451 171 --SRKESYDVIIGDLA 184 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~ 184 (297)
....+.|+||+.+.
T Consensus 82 ~~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 82 AISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 11247999999875
No 469
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.03 E-value=8.2 Score=32.87 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+...+.+... ..++.++..|..+. +.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHH
Confidence 46788988865442 34455543 468999999998877666554432 25788888886322 21
Q ss_pred -ccCCCceEEEEcCCC
Q 022451 171 -SRKESYDVIIGDLAD 185 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~~ 185 (297)
...++.|+++..+..
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 122579999998753
No 470
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.98 E-value=4 Score=36.43 Aligned_cols=105 Identities=13% Similarity=0.197 Sum_probs=55.2
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
..+|.+||+|. .+++..++......+|..+|++++....+.+.... ..++++.. .|- +-+ +.-|+|+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~-----~~~~i~~t-~d~-~~l----~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF-----NLPNVEIS-KDL-SAS----AHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH-----TCTTEEEE-SCG-GGG----TTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh-----cCCCeEEe-CCH-HHH----CCCCEEE
Confidence 46899999994 33666666544456899999998643334333221 12466653 563 222 4589999
Q ss_pred EcCCCCCCCCCccCcc------cHHHHHHHHcccCCCCcEEEEecC
Q 022451 181 GDLADPIEGGPCYKLY------TKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~------t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
.-.-.+...+....|. -++.++. +.+. .|++++++-++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~-i~~~-~p~a~iiv~sN 126 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPA-LGHY-SQHSVLLVASQ 126 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHH-HHHH-TTTCEEEECSS
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHh-CCCeEEEEcCC
Confidence 8764321000000111 2345555 4444 49999866443
No 471
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=83.96 E-value=5.7 Score=34.76 Aligned_cols=75 Identities=9% Similarity=0.062 Sum_probs=48.4
Q ss_pred CCCeEEEEccchh-----HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh
Q 022451 102 NPKTIFIMGGGEG-----STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G-----~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~ 170 (297)
..+.||+.|+++| .+++.+++. ..+|.+++.++...+.+++..... +++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 5688999997643 245666654 468999999976655555433222 3577888886322 21
Q ss_pred ---ccCCCceEEEEcCC
Q 022451 171 ---SRKESYDVIIGDLA 184 (297)
Q Consensus 171 ---~~~~~yD~Ii~D~~ 184 (297)
..-++.|++|..+.
T Consensus 102 ~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHTSCCSEEEECCC
T ss_pred HHHHhcCCCCEEEECCc
Confidence 12357999999875
No 472
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.69 E-value=0.9 Score=41.52 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=26.6
Q ss_pred CCeEEEEccchhHHH--HHHHhcCCCcEEEEEECCH
Q 022451 103 PKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 103 ~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEid~ 136 (297)
+|+|++||+|.+++. ..|.+..+..+|++||-++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 689999999988764 4466655567999999875
No 473
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=83.54 E-value=14 Score=32.06 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=50.3
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~- 171 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+.+.+.+... ..++.++..|..+. +..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGA-----GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999976543 34555554 468999999988776665544322 35788888886432 211
Q ss_pred --cCCCceEEEEcCC
Q 022451 172 --RKESYDVIIGDLA 184 (297)
Q Consensus 172 --~~~~yD~Ii~D~~ 184 (297)
.-++.|+++..+.
T Consensus 100 ~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 100 VLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 2257999999875
No 474
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.44 E-value=5.6 Score=34.62 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=55.1
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhh-hhhccCCCCC---CCeEEEEcchHHHHhccCCCce
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFSD---PRLELVINDARAELESRKESYD 177 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-f~~~~~~~~~---~rv~~~~~Da~~~l~~~~~~yD 177 (297)
.+|++||+|. +.++..+.+. ..+|++++.+++.++..++. +.... ... .++++. +..+.. ..-+.+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~--~~~~~~-~~~~~~d 76 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADF--NGEEVVANLPIF--SPEEID-HQNEQVD 76 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEE--TTEEEEECCCEE--CGGGCC-TTSCCCS
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEe--CCCeeEecceee--cchhhc-ccCCCCC
Confidence 3799999983 3345555553 35899999999887766553 11110 000 011111 111110 0012699
Q ss_pred EEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEe
Q 022451 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (297)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~ 218 (297)
+|++..+.. ...+.++. +...|+++.+++..
T Consensus 77 ~vi~~v~~~---------~~~~v~~~-l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 77 LIIALTKAQ---------QLDAMFKA-IQPMITEKTYVLCL 107 (316)
T ss_dssp EEEECSCHH---------HHHHHHHH-HGGGCCTTCEEEEC
T ss_pred EEEEEeccc---------cHHHHHHH-HHHhcCCCCEEEEe
Confidence 999986521 13577787 78889888766544
No 475
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=83.35 E-value=2.4 Score=37.36 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=44.4
Q ss_pred CCCceEEEEcCCCCCCCCC---cc-CcccHH-HHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHhhCCceeE
Q 022451 173 KESYDVIIGDLADPIEGGP---CY-KLYTKS-FYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVP 247 (297)
Q Consensus 173 ~~~yD~Ii~D~~~~~~~~p---~~-~L~t~e-f~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (297)
-.+||+|+++...|.+.-- |+ +-.... .-.. .-++|+|||.+++.... ...+.-+.++..+.+.|..+.+
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~-al~~L~pGGtlv~~aYG----yADR~SE~vV~alARkF~~~rv 283 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGD-SLRLLKPGGSLLIRAYG----YADRTSERVICVLGRKFRSSRA 283 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHH-GGGGEEEEEEEEEEECC----CCSHHHHHHHHHHHTTEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHH-HHhhcCCCceEEEEeec----ccccchHHHHHHHHhhheeeee
Confidence 3789999999876653110 00 000001 1112 35899999999988632 2345567888999999987764
Q ss_pred E
Q 022451 248 Y 248 (297)
Q Consensus 248 ~ 248 (297)
.
T Consensus 284 ~ 284 (324)
T 3trk_A 284 L 284 (324)
T ss_dssp E
T ss_pred e
Confidence 4
No 476
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.32 E-value=1.8 Score=42.54 Aligned_cols=32 Identities=22% Similarity=0.504 Sum_probs=24.1
Q ss_pred CCeEEEEccch-hHH-HHHHHhcCCCcEEEEEECC
Q 022451 103 PKTIFIMGGGE-GST-AREILRHKTVEKVVMCDID 135 (297)
Q Consensus 103 ~~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid 135 (297)
..+||++|+|+ |+. +..|++ .+..+|+.||-|
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~-aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-TTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCCEEEEECCC
Confidence 57999999984 433 444444 578999999988
No 477
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.26 E-value=6.4 Score=33.17 Aligned_cols=76 Identities=14% Similarity=0.297 Sum_probs=47.3
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~- 171 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+...+.+... ..++.++..|..+. ++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRME-----GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 46789999865432 34444443 468999999987665444433221 25788888886432 211
Q ss_pred --cCCCceEEEEcCC
Q 022451 172 --RKESYDVIIGDLA 184 (297)
Q Consensus 172 --~~~~yD~Ii~D~~ 184 (297)
...+.|+|++.+.
T Consensus 85 ~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 85 HEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1246899999875
No 478
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.22 E-value=4.3 Score=34.64 Aligned_cols=76 Identities=24% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~- 171 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+.+.+.+... ..++.++..|..+. +..
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 45788888866442 34555554 468999999998877666544321 35788888886432 211
Q ss_pred --cCCCceEEEEcCC
Q 022451 172 --RKESYDVIIGDLA 184 (297)
Q Consensus 172 --~~~~yD~Ii~D~~ 184 (297)
.-++.|+++..+.
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247899999875
No 479
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=83.12 E-value=14 Score=32.06 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=45.4
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCH--HHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDE--EVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~--~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~ 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+. .-.+...+..... ..++.++..|..+. +.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEEC-----GRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHT-----TCCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHc-----CCcEEEEEecCCCHHHHHHHHH
Confidence 46789999976542 34555554 46899988873 3333333322221 25678888786432 21
Q ss_pred ---ccCCCceEEEEcCCC
Q 022451 171 ---SRKESYDVIIGDLAD 185 (297)
Q Consensus 171 ---~~~~~yD~Ii~D~~~ 185 (297)
..-++.|+++..+..
T Consensus 121 ~~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 121 KAREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHHTCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 122578999998763
No 480
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.04 E-value=6 Score=35.09 Aligned_cols=78 Identities=22% Similarity=0.354 Sum_probs=51.6
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~-- 170 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+.... .++++.++..|..+. +.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46789999976553 45555554 4689999999987776665544221 124788888886332 21
Q ss_pred -ccCCCceEEEEcCC
Q 022451 171 -SRKESYDVIIGDLA 184 (297)
Q Consensus 171 -~~~~~yD~Ii~D~~ 184 (297)
..-.+.|+++..+.
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 12357899999876
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.81 E-value=4.5 Score=35.42 Aligned_cols=89 Identities=15% Similarity=0.221 Sum_probs=56.2
Q ss_pred CeEEEEccch--hHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 104 KTIFIMGGGE--GSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.+|.+||+|. +.++..+++.. +..+|+++|.+++-.+.+++.++ +++ ..|..+.+ +..|+|+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g----------i~~-~~~~~~~~----~~aDvVi 68 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG----------VHT-TQDNRQGA----LNADVVV 68 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC----------CEE-ESCHHHHH----SSCSEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC----------CEE-eCChHHHH----hcCCeEE
Confidence 5799999983 34556555542 23479999999998777665321 232 34544444 3479999
Q ss_pred EcCCCCCCCCCccCcccHHHHHHHHccc-CCCCcEEEE
Q 022451 181 GDLADPIEGGPCYKLYTKSFYEFVVKPR-LNPEGIFVT 217 (297)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~-L~pgGvl~~ 217 (297)
+-.+. . ...+.++. ++.. |+++-+++-
T Consensus 69 lav~p--------~-~~~~vl~~-l~~~~l~~~~iiiS 96 (280)
T 3tri_A 69 LAVKP--------H-QIKMVCEE-LKDILSETKILVIS 96 (280)
T ss_dssp ECSCG--------G-GHHHHHHH-HHHHHHTTTCEEEE
T ss_pred EEeCH--------H-HHHHHHHH-HHhhccCCCeEEEE
Confidence 98642 1 12467777 6777 776656553
No 482
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.78 E-value=8.9 Score=32.58 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=48.9
Q ss_pred CCCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHh-
Q 022451 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELE- 170 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~------~l~- 170 (297)
-..+.||+.|+++|. +++.+++. ..+|.+++.+++-.+...+.+ .+++.++..|..+ .+.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~ 75 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAA 75 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHH
Confidence 356889999976542 34555554 468999999988766554433 1467788877632 221
Q ss_pred --ccCCCceEEEEcCCC
Q 022451 171 --SRKESYDVIIGDLAD 185 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~~ 185 (297)
..-++.|+++..+..
T Consensus 76 ~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 76 TVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHSSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 123579999998763
No 483
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.74 E-value=5 Score=34.27 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=50.8
Q ss_pred CCCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 022451 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~- 170 (297)
-..+.+|+.|+++|. +++.+++. ..+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQA-----GGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHH
Confidence 356789998876543 34555554 468999999998776665554322 36788888886432 21
Q ss_pred --ccCCCceEEEEcCC
Q 022451 171 --SRKESYDVIIGDLA 184 (297)
Q Consensus 171 --~~~~~yD~Ii~D~~ 184 (297)
..-++.|+++..+.
T Consensus 83 ~~~~~g~id~lv~nAg 98 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAG 98 (256)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 11247999999875
No 484
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.71 E-value=7.1 Score=37.05 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHH-HHHHhhhh-h-ccCCCC-------CCCeEEEEcchHHHHh
Q 022451 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVV-EFCKSYLV-V-NKEAFS-------DPRLELVINDARAELE 170 (297)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi-~~a~~~f~-~-~~~~~~-------~~rv~~~~~Da~~~l~ 170 (297)
-++|.+||+|. ++++..+++. .-+|+++|++++-. +..++.+. . ....+. -.++++. .|. +
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl-~--- 126 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF-H--- 126 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG-G---
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH-H---
Confidence 36899999994 5567777764 35899999999811 11111111 0 000000 0234432 332 1
Q ss_pred ccCCCceEEEEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecC
Q 022451 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 171 ~~~~~yD~Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
.-...|+||...+.. .-...++|+. +.+.++|+-+++.|+.
T Consensus 127 -al~~aDlVIeAVpe~-------~~vk~~v~~~-l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 127 -KLSNCDLIVESVIED-------MKLKKELFAN-LENICKSTCIFGTNTS 167 (460)
T ss_dssp -GCTTCSEEEECCCSC-------HHHHHHHHHH-HHTTSCTTCEEEECCS
T ss_pred -HHccCCEEEEcCCCC-------HHHHHHHHHH-HHhhCCCCCEEEecCC
Confidence 124589999987631 1124577888 7899999999988864
No 485
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=82.71 E-value=10 Score=33.69 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=42.5
Q ss_pred CCCeEEEEccchh-H-HHHHHH-hcCCCcEE-EEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCce
Q 022451 102 NPKTIFIMGGGEG-S-TAREIL-RHKTVEKV-VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (297)
Q Consensus 102 ~~~~VL~iG~G~G-~-~~~~l~-~~~~~~~v-~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD 177 (297)
++.+|.+||+|.= . .+..+. +. +..++ .++|.+++..+.+.+.++. + -...|..+.+.. ...|
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~-~~~~~vav~d~~~~~~~~~a~~~g~-------~---~~~~~~~~~l~~--~~~D 73 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKI-QGVKLVAACALDSNQLEWAKNELGV-------E---TTYTNYKDMIDT--ENID 73 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTC-SSEEEEEEECSCHHHHHHHHHTTCC-------S---EEESCHHHHHTT--SCCS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHhCC-------C---cccCCHHHHhcC--CCCC
Confidence 4568999999842 2 344444 33 34554 4679999877554432221 1 134566666642 4689
Q ss_pred EEEEcCCC
Q 022451 178 VIIGDLAD 185 (297)
Q Consensus 178 ~Ii~D~~~ 185 (297)
+|++..+.
T Consensus 74 ~V~i~tp~ 81 (346)
T 3cea_A 74 AIFIVAPT 81 (346)
T ss_dssp EEEECSCG
T ss_pred EEEEeCCh
Confidence 99987653
No 486
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=82.58 E-value=6.4 Score=34.08 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=49.3
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~- 171 (297)
.++.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+... ..++.++..|..+. +..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999976542 34555554 468999999998776665544322 35788888886432 211
Q ss_pred --cCCCceEEEEcCC
Q 022451 172 --RKESYDVIIGDLA 184 (297)
Q Consensus 172 --~~~~yD~Ii~D~~ 184 (297)
.-++.|+++..+.
T Consensus 96 ~~~~g~id~lv~nAg 110 (279)
T 3sju_A 96 VERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHCSCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 2257899999875
No 487
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.50 E-value=16 Score=31.70 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=54.4
Q ss_pred CeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEEEE
Q 022451 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (297)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii~ 181 (297)
.+|.+||+|. ..++..+++. ..+|+++|.+++.++.+++. .++ ...|..+.+ +..|+|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-----------g~~-~~~~~~~~~----~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-----------GAS-AARSARDAV----QGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-----------TCE-ECSSHHHHH----TTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-----------CCe-EcCCHHHHH----hCCCeEEE
Confidence 5799999983 4456666664 35899999999887766542 122 224444444 34799999
Q ss_pred cCCCCCCCCCccCcccHHHHH---HHHcccCCCCcEEEE
Q 022451 182 DLADPIEGGPCYKLYTKSFYE---FVVKPRLNPEGIFVT 217 (297)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~---~~~~~~L~pgGvl~~ 217 (297)
..+.+. ..++.+. . +...++++.+++-
T Consensus 66 ~vp~~~--------~~~~v~~~~~~-~~~~l~~~~~vi~ 95 (302)
T 2h78_A 66 MLPASQ--------HVEGLYLDDDG-LLAHIAPGTLVLE 95 (302)
T ss_dssp CCSCHH--------HHHHHHHSSSC-GGGSSCSSCEEEE
T ss_pred ECCCHH--------HHHHHHcCchh-HHhcCCCCcEEEE
Confidence 875321 1234444 4 4567887776643
No 488
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=82.49 E-value=4 Score=37.11 Aligned_cols=70 Identities=23% Similarity=0.349 Sum_probs=40.1
Q ss_pred CCCCeEEEEccc-hhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhccCCCce
Q 022451 101 PNPKTIFIMGGG-EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESRKESYD 177 (297)
Q Consensus 101 ~~~~~VL~iG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~--~~l~~~~~~yD 177 (297)
.+..+||+||+| .|......+. ....|+++|++.+-++.+++. +..+..|+. +.+...-++.|
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~--~~~~v~~~~~~~~~~~~~~~~------------~~~~~~d~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLK--DEFDVYIGDVNNENLEKVKEF------------ATPLKVDASNFDKLVEVMKEFE 79 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHT--TTSEEEEEESCHHHHHHHTTT------------SEEEECCTTCHHHHHHHHTTCS
T ss_pred CCccEEEEECCCHHHHHHHHHHh--cCCCeEEEEcCHHHHHHHhcc------------CCcEEEecCCHHHHHHHHhCCC
Confidence 345689999985 2333222332 235799999999888776543 223333432 22322224689
Q ss_pred EEEEcCC
Q 022451 178 VIIGDLA 184 (297)
Q Consensus 178 ~Ii~D~~ 184 (297)
+|++-++
T Consensus 80 vVi~~~p 86 (365)
T 3abi_A 80 LVIGALP 86 (365)
T ss_dssp EEEECCC
T ss_pred EEEEecC
Confidence 9988664
No 489
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.48 E-value=3.9 Score=35.90 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=47.0
Q ss_pred CCCCeEEEEccchhHHHH----HHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE-EcchHHH--HhccC
Q 022451 101 PNPKTIFIMGGGEGSTAR----EILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAE--LESRK 173 (297)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~----~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~-~~Da~~~--l~~~~ 173 (297)
...++||+.|+. |.++. .+++. ..+|++++.++.-.+...+.+... ..++++++ .+|..+. +...-
T Consensus 9 ~~~~~vlVTGat-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~ 81 (342)
T 1y1p_A 9 PEGSLVLVTGAN-GFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAK----YPGRFETAVVEDMLKQGAYDEVI 81 (342)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHH----STTTEEEEECSCTTSTTTTTTTT
T ss_pred CCCCEEEEECCc-cHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhcc----CCCceEEEEecCCcChHHHHHHH
Confidence 456789999853 55444 44443 358999999887655444333211 12578888 7886542 22222
Q ss_pred CCceEEEEcCC
Q 022451 174 ESYDVIIGDLA 184 (297)
Q Consensus 174 ~~yD~Ii~D~~ 184 (297)
+..|+||+.+.
T Consensus 82 ~~~d~vih~A~ 92 (342)
T 1y1p_A 82 KGAAGVAHIAS 92 (342)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEEeCC
Confidence 36899999875
No 490
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=82.23 E-value=1.8 Score=39.52 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=31.6
Q ss_pred ChhhHHHHHHHHHHh--cCCCCCeEEEEccch-hHH-HHHHHhcCCCcEEEEEECCH
Q 022451 84 DEFIYHESLVHPALL--HHPNPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDE 136 (297)
Q Consensus 84 d~~~y~e~l~~~~l~--~~~~~~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 136 (297)
+...|.+.+...... ..-...+||++|+|+ |+- +..|.. .+..+++.+|-|.
T Consensus 15 ~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~-~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 15 EAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLIL-AGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred HHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHH-cCCCEEEEEECCC
Confidence 345677765422211 112467999999974 333 344444 4688999998764
No 491
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.21 E-value=11 Score=33.18 Aligned_cols=76 Identities=25% Similarity=0.285 Sum_probs=43.8
Q ss_pred CeEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCCCCCCeEEEEcchHHHHhccCCCceEEE
Q 022451 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFSDPRLELVINDARAELESRKESYDVII 180 (297)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~-~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~Ii 180 (297)
.+|.+||+|.=+ ++..+++..-..+|+.+|++++.++.....+. ... +...++++...|. +.+ +..|+|+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~d~-~~~----~~aDvVi 74 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA--NLEAHGNIVINDW-AAL----ADADVVI 74 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG--GSSSCCEEEESCG-GGG----TTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh--hcCCCeEEEeCCH-HHh----CCCCEEE
Confidence 379999987433 34444443212589999999987755443222 110 0112455545663 322 4589999
Q ss_pred EcCCCC
Q 022451 181 GDLADP 186 (297)
Q Consensus 181 ~D~~~~ 186 (297)
+-...+
T Consensus 75 iav~~~ 80 (309)
T 1hyh_A 75 STLGNI 80 (309)
T ss_dssp ECCSCG
T ss_pred EecCCc
Confidence 987643
No 492
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=82.00 E-value=14 Score=32.73 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=59.4
Q ss_pred CCCeEEEEccch--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCceEE
Q 022451 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (297)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~yD~I 179 (297)
.+++|.+||+|. ..+++.+.. . ..+|.++|.++.- +.+++. .++. .+..+.+. +.|+|
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~-~-G~~V~~~d~~~~~-~~~~~~-----------g~~~--~~l~ell~----~aDvV 200 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANA-L-GMNILLYDPYPNE-ERAKEV-----------NGKF--VDLETLLK----ESDVV 200 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-T-TCEEEEECSSCCH-HHHHHT-----------TCEE--CCHHHHHH----HCSEE
T ss_pred CCceEEEEccCHHHHHHHHHHHH-C-CCEEEEECCCCCh-hhHhhc-----------Cccc--cCHHHHHh----hCCEE
Confidence 467899999872 233444444 3 3689999998865 333331 1222 24445553 47999
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEecCCCCCcCCchHHHHHHHHHHh
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (297)
++..+.... ...++..+.+ +.+++|+++ +|++.- ..-...++.+.+++
T Consensus 201 ~l~~p~~~~---t~~li~~~~l-----~~mk~ga~l-in~arg----~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 201 TIHVPLVES---TYHLINEERL-----KLMKKTAIL-INTSRG----PVVDTNALVKALKE 248 (307)
T ss_dssp EECCCCSTT---TTTCBCHHHH-----HHSCTTCEE-EECSCG----GGBCHHHHHHHHHH
T ss_pred EEecCCChH---HhhhcCHHHH-----hcCCCCeEE-EECCCC----cccCHHHHHHHHHh
Confidence 999874221 1355555443 456777765 575321 11122455566654
No 493
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.00 E-value=9 Score=33.21 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~------l~~- 171 (297)
..+.||+.|+++|. +++.+++. ..+|++++.++.-.+.+.+.+..........++.++..|..+. +..
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 45789999965432 34444443 4689999999877665544433210000135788898886432 211
Q ss_pred --cCCCceEEEEcCC
Q 022451 172 --RKESYDVIIGDLA 184 (297)
Q Consensus 172 --~~~~yD~Ii~D~~ 184 (297)
.-++.|+||..+.
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1246999999875
No 494
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=81.97 E-value=6.8 Score=33.63 Aligned_cols=76 Identities=17% Similarity=0.257 Sum_probs=48.0
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECC------------HHHHHHHHhhhhhccCCCCCCCeEEEEcchH
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDID------------EEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid------------~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~ 166 (297)
..+.||+.|+++|. +++.+++. ..+|.+++.+ ++-++...+.+... ..++.++..|..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-----GSRIVARQADVR 84 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-----TCCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhc-----CCeEEEEeCCCC
Confidence 56889999976542 45555554 4689999987 55554444433322 257888888864
Q ss_pred H------HHhc---cCCCceEEEEcCC
Q 022451 167 A------ELES---RKESYDVIIGDLA 184 (297)
Q Consensus 167 ~------~l~~---~~~~yD~Ii~D~~ 184 (297)
+ .+.. .-++.|++|..+.
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3 2221 1247999999875
No 495
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.95 E-value=1.7 Score=38.79 Aligned_cols=90 Identities=17% Similarity=0.329 Sum_probs=55.1
Q ss_pred eEEEEcc--chhHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-ch-HHHHhc-cCCCceEE
Q 022451 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DA-RAELES-RKESYDVI 179 (297)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~-Da-~~~l~~-~~~~yD~I 179 (297)
+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. +.. .++.. |. .+.++. ....+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~---------~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GAS---------EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TCS---------EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEEECCCchHHHHHHhhcCCccEE
Confidence 8999996 45666777777654 4799999998888888763 211 11111 10 011111 23469988
Q ss_pred EEcCCCCCCCCCccCcccHHHHHHHHcccCCCCcEEEEec
Q 022451 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (297)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGvl~~~~ 219 (297)
+-... . +.++. +.++|+++|.++.-.
T Consensus 222 id~~g-----~--------~~~~~-~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVG-----G--------KQLAS-LLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCC-----T--------HHHHH-HHTTEEEEEEEEECC
T ss_pred EECCc-----H--------HHHHH-HHHhhcCCCEEEEEe
Confidence 75431 1 23555 578999999987653
No 496
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.79 E-value=21 Score=31.53 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=53.9
Q ss_pred eEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHH-HHh--hhhhccCCCCCCCeEEE-EcchHHHHhccCCCceE
Q 022451 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEF-CKS--YLVVNKEAFSDPRLELV-INDARAELESRKESYDV 178 (297)
Q Consensus 105 ~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~-a~~--~f~~~~~~~~~~rv~~~-~~Da~~~l~~~~~~yD~ 178 (297)
+|.+||+|.=+ ++..++......+|..+|++++.++- +.. +.... + ....++. ..| .+-+ +..|+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~---~-~~~~~i~~t~d-~~a~----~~aDi 72 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG---I-DKYPKIVGGAD-YSLL----KGSEI 72 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT---T-TCCCEEEEESC-GGGG----TTCSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh---c-CCCCEEEEeCC-HHHh----CCCCE
Confidence 68899997432 33334443333489999999987652 111 11100 0 1233444 345 3333 34799
Q ss_pred EEEcCCCCCCCCC-ccCcc--c----HHHHHHHHcccCCCCcEEEEecC
Q 022451 179 IIGDLADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQAG 220 (297)
Q Consensus 179 Ii~D~~~~~~~~p-~~~L~--t----~ef~~~~~~~~L~pgGvl~~~~~ 220 (297)
|++-...|...+. ...|+ + +++.+. +.+. .|++++++-++
T Consensus 73 VViaag~~~kpG~~R~dl~~~N~~i~~~i~~~-i~~~-~p~a~iivvsN 119 (294)
T 1oju_A 73 IVVTAGLARKPGMTRLDLAHKNAGIIKDIAKK-IVEN-APESKILVVTN 119 (294)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHH-HHTT-STTCEEEECSS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHH-HHhh-CCCeEEEEeCC
Confidence 9987665431111 01111 1 123333 3444 89999877653
No 497
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=81.72 E-value=8.5 Score=33.36 Aligned_cols=72 Identities=25% Similarity=0.296 Sum_probs=49.1
Q ss_pred CCCeEEEEccchhH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHhcc
Q 022451 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELESR 172 (297)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~------~l~~~ 172 (297)
.++.||+.|+++|. +++.+++. ..+|.+++.++.-.+.+.+.+ ..++.++..|..+ +++..
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTM--------AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTS--------SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh--------cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 56889999876442 34555554 468999999988776665533 2578888888643 22222
Q ss_pred CCCceEEEEcCC
Q 022451 173 KESYDVIIGDLA 184 (297)
Q Consensus 173 ~~~yD~Ii~D~~ 184 (297)
.+.|+++..+.
T Consensus 85 -~~iD~lv~nAg 95 (291)
T 3rd5_A 85 -SGADVLINNAG 95 (291)
T ss_dssp -CCEEEEEECCC
T ss_pred -CCCCEEEECCc
Confidence 57899999875
No 498
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=81.67 E-value=1.4 Score=40.94 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=36.3
Q ss_pred CCCCCeEEEEccchhHHHHHHHhc-------CCCcEEEEEECCHHHHHHHHhhh
Q 022451 100 HPNPKTIFIMGGGEGSTAREILRH-------KTVEKVVMCDIDEEVVEFCKSYL 146 (297)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~-------~~~~~v~~VEid~~vi~~a~~~f 146 (297)
.+.+-+|+++|.|.|.++.-+++. ....++..||++|...+.=++.+
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 355668999999999998777753 12458999999999988666654
No 499
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=81.58 E-value=13 Score=33.13 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=48.8
Q ss_pred cCCCCCeEEEEccchhH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhccCCCc
Q 022451 99 HHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (297)
Q Consensus 99 ~~~~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~~l~~~~~~y 176 (297)
..++.+++++||+|.=+ .+..+++..+..+|.+++.+++-.+...+.+... .-.+. ..|..+.+ ..
T Consensus 121 a~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~-----~~~~~--~~~~~e~v-----~a 188 (322)
T 1omo_A 121 ARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR-----GISAS--VQPAEEAS-----RC 188 (322)
T ss_dssp SCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT-----TCCEE--ECCHHHHT-----SS
T ss_pred cCCCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhc-----CceEE--ECCHHHHh-----CC
Confidence 34678899999998432 3444555446789999999998776655554321 01222 55655544 38
Q ss_pred eEEEEcCCC
Q 022451 177 DVIIGDLAD 185 (297)
Q Consensus 177 D~Ii~D~~~ 185 (297)
|+|++-.+.
T Consensus 189 DvVi~aTp~ 197 (322)
T 1omo_A 189 DVLVTTTPS 197 (322)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeeCC
Confidence 999998764
No 500
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.45 E-value=5.6 Score=37.59 Aligned_cols=68 Identities=21% Similarity=0.345 Sum_probs=44.8
Q ss_pred CeEEEEccch-hHH-HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcc-CCCceE
Q 022451 104 KTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYDV 178 (297)
Q Consensus 104 ~~VL~iG~G~-G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~f~~~~~~~~~~rv~~~~~Da~~--~l~~~-~~~yD~ 178 (297)
-+|+++|+|- |.. ++.|.. ....|++||.|++.++.+.+.+ .+.++.||+.. .|+.. -++.|+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~--~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVG--ENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCS--TTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 3799999873 222 333322 2468999999999998776543 36788899854 35443 367888
Q ss_pred EEEcC
Q 022451 179 IIGDL 183 (297)
Q Consensus 179 Ii~D~ 183 (297)
++.-.
T Consensus 72 ~ia~t 76 (461)
T 4g65_A 72 LVAVT 76 (461)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 77643
Done!