Query 022452
Match_columns 297
No_of_seqs 140 out of 728
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 03:38:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03185 phosphatidylinositol 100.0 1.5E-70 3.2E-75 559.6 24.8 291 1-294 475-765 (765)
2 KOG0229 Phosphatidylinositol-4 100.0 1.6E-65 3.4E-70 486.5 20.2 247 1-294 169-420 (420)
3 smart00330 PIPKc Phosphatidyli 100.0 2.1E-61 4.6E-66 458.4 21.5 237 1-293 100-342 (342)
4 cd00139 PIPKc Phosphatidylinos 100.0 6.7E-61 1.5E-65 449.9 18.6 178 1-294 127-313 (313)
5 PF01504 PIP5K: Phosphatidylin 100.0 3.1E-59 6.8E-64 427.9 12.3 201 1-293 46-252 (252)
6 KOG0230 Phosphatidylinositol-4 100.0 2.6E-41 5.6E-46 354.3 11.7 178 1-296 1395-1589(1598)
7 COG5253 MSS4 Phosphatidylinosi 100.0 3E-39 6.5E-44 310.0 10.6 120 2-122 405-534 (612)
8 PLN02667 inositol polyphosphat 75.8 3.6 7.7E-05 38.8 4.1 50 4-56 44-99 (286)
9 KOG4620 Uncharacterized conser 36.8 24 0.00052 26.5 1.7 38 254-295 6-43 (80)
10 PF10664 NdhM: Cyanobacterial 30.3 32 0.0007 27.4 1.5 21 250-270 63-86 (108)
11 PRK13610 photosystem II reacti 22.9 43 0.00094 27.1 1.1 14 279-292 93-106 (113)
12 PLN00039 photosystem II reacti 21.9 48 0.001 26.9 1.1 15 279-293 87-101 (111)
13 TIGR03047 PS_II_psb28 photosys 21.4 50 0.0011 26.7 1.1 15 279-293 86-100 (109)
14 PF03912 Psb28: Psb28 protein; 21.2 50 0.0011 26.6 1.1 14 279-292 86-99 (108)
15 PRK13612 photosystem II reacti 20.9 51 0.0011 26.8 1.1 15 279-293 89-103 (113)
16 CHL00128 psbW photosystem II p 20.6 53 0.0011 26.7 1.1 15 279-293 89-103 (113)
No 1
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=1.5e-70 Score=559.63 Aligned_cols=291 Identities=58% Similarity=0.941 Sum_probs=249.6
Q ss_pred ChHhHHHHHhcCCCcchhhhceEEEEEEcCCeEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCccccccCCccccCCC
Q 022452 1 MLHEYYIHVKKHENTLITKFFGLHRITLRGGRKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKDKIKENTTLKDLDL 80 (297)
Q Consensus 1 lLp~Y~~hl~~np~slL~r~~Gl~~i~~~~~~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~vlkD~d~ 80 (297)
|||+||+||+.||+|||+||||||+|++.++++++||||+|||++...||++||||||+++|.+.+.+.+..+||||+||
T Consensus 475 iLp~Y~~hv~~n~~TLL~kf~Gl~~i~~~~g~k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~~~~~~~tlKDlD~ 554 (765)
T PLN03185 475 MLPDYHHHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKVEIDENTTLKDLDL 554 (765)
T ss_pred HHHHHHHHHhhCCCcchhhheEEEEEEeCCCcEEEEEEEecCCCCCCccceEEECCCCCCCCCCccccccCCCeeeecCc
Confidence 69999999999999999999999999988889999999999999988999999999999999997766677899999999
Q ss_pred ccccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCCCCccCCCCcccCCC
Q 022452 81 SFEFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRTDGIIGSQGELIIPP 160 (297)
Q Consensus 81 ~~~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (297)
+.+|+|+++.++.|++||++||+||+++||||||||||||.+++.+...+.....+. ...++...+...+.+++.+.++
T Consensus 555 ~~~~~l~~~~k~~l~~qL~~D~~FL~~~~IMDYSLLvGIh~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 633 (765)
T PLN03185 555 NYSFYLEPSWRDALLRQIEIDSKFLEAQRIMDYSLLLGVHFRAPQHLRSLLPYSRSI-TADGLEVVAEEDTIEDEELSYP 633 (765)
T ss_pred CceEeeCHHHHHHHHHHHHHHHHHHhHCcCeecceEEEEEecChhhhcccccccccc-cccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999998776544332221111 0111111222233345556778
Q ss_pred CCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCccCccccccccccee
Q 022452 161 KGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNECDSNEVELFEVYDV 240 (297)
Q Consensus 161 ~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~~~~~~~~~~~~~~ 240 (297)
.++++++|.....|++.++|++++++++.+.+..++|.++|+..+.++++|+||||++++....++.+.. ..+|.+++
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~mpara~~~~~~~~~~~~--~~~e~~d~ 711 (765)
T PLN03185 634 EGLVLVPRGADDGSTVPGPHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAERIPGREDKEKQ--SFHEVYDV 711 (765)
T ss_pred cccccccccccccccCCCcccccccccccccCchhhhhccccccccchhhcccCchhhhccccccccccc--ccCcccce
Confidence 8888888877666778888999999998888889999999998888999999999999988776544322 24789999
Q ss_pred EEEEeEEeeecccchhHHHHHHHHhhcCCCCCceeeChhHHHHHHHHHHhccCC
Q 022452 241 VLYMGIIDILQEYNVKKKIEHAFKSLQFDPQLISVVEPKFYASRFINFLKKKFP 294 (297)
Q Consensus 241 iyylGIIDiLq~Y~~~KklE~~~Ksl~~d~~~iS~v~P~~Ya~RF~~f~~~iF~ 294 (297)
|||||||||||+|++.|||||+||++++|+.+||||+|+.|++||++||.++|+
T Consensus 712 ~~~~giidilq~y~~~k~~eh~~k~~~~~~~~is~v~p~~y~~rf~~f~~~~f~ 765 (765)
T PLN03185 712 VLYLGIIDILQEYNMSKKIEHAYKSLQFDSLSISAVDPTFYSKRFLEFIQKVFP 765 (765)
T ss_pred EEEEEEEEeecccchhHHHHHHHhhhccCCCceeccChHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999995
No 2
>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-65 Score=486.47 Aligned_cols=247 Identities=49% Similarity=0.765 Sum_probs=188.8
Q ss_pred ChHhHHHHHhc-CCCcchhhhceEEEEEEcCCeEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCc-cccccCCccccC
Q 022452 1 MLHEYYIHVKK-HENTLITKFFGLHRITLRGGRKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDK-DKIKENTTLKDL 78 (297)
Q Consensus 1 lLp~Y~~hl~~-np~slL~r~~Gl~~i~~~~~~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~-~~~~~~~vlkD~ 78 (297)
|||+||+|+.+ ||.|||+||||||+|+..+|+++|||||+|+|+++..||++||||||+++|.+.+ .+.++.+||||+
T Consensus 169 mLp~Yy~~v~~~~~~TLl~kf~Gly~vk~~gg~k~yfvVM~Nlf~~~~~iH~kyDLKGSt~~R~askke~~k~~pTlKDl 248 (420)
T KOG0229|consen 169 MLPGYYQHVVEQNNRTLLPKFFGLYRVKPDGGKKIYFVVMNNLFPSRLKVHRKYDLKGSTVGREASKKEKIKELPTLKDL 248 (420)
T ss_pred HHHHHHHHHHccCCceeehhhceeEEEeeCCCceEEEEEecccCCCccceeEEeecCCCcccccccchhhccCCCccccc
Confidence 69999999755 5559999999999999988899999999999999999999999999999999987 556788999999
Q ss_pred CCc---cccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCCCCccCCCCc
Q 022452 79 DLS---FEFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRTDGIIGSQGE 155 (297)
Q Consensus 79 d~~---~~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
||. .+|+|++.++++|++||++||+||++++|||||||||||.++...........
T Consensus 249 Df~~~~~~~~l~~~~~~~l~~ql~~Dce~Le~~~IMDYSLLvGiH~~~~~~~~~~~~~~--------------------- 307 (420)
T KOG0229|consen 249 DFLNEGQKLYLGKEAKKALLKQLKRDCEFLESLKIMDYSLLVGIHDRDRGQAEKEELEP--------------------- 307 (420)
T ss_pred hhhccCceEecCHHHHHHHHHHHHHHHHHHHHhcchhhhheeeeeeccccccchhhcCC---------------------
Confidence 998 68999999999999999999999999999999999999987653211000000
Q ss_pred ccCCCCCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCccCccccccc
Q 022452 156 LIIPPKGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNECDSNEVELF 235 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~~~~~~~~~ 235 (297)
...++.++...+..+. + + ..++++....+.|.++|+++..-.......... ...
T Consensus 308 --------------------~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~i~~g~~~p~~~~~~~~~~~~~~~~-~~~ 361 (420)
T KOG0229|consen 308 --------------------QEDESEREQRLSSASP---E-D-VLTSTASPSIQLGANMPARAGEERVDRMEYAPA-QNS 361 (420)
T ss_pred --------------------CCCccccccccccccc---c-c-cCCCCCcccccCCCCCCCccccccccccccccc-ccc
Confidence 0000011111111011 0 1 122233345667788888773211111001111 122
Q ss_pred ccceeEEEEeEEeeecccchhHHHHHHHHhhcCCCCCceeeChhHHHHHHHHHHhccCC
Q 022452 236 EVYDVVLYMGIIDILQEYNVKKKIEHAFKSLQFDPQLISVVEPKFYASRFINFLKKKFP 294 (297)
Q Consensus 236 ~~~~~iyylGIIDiLq~Y~~~KklE~~~Ksl~~d~~~iS~v~P~~Ya~RF~~f~~~iF~ 294 (297)
.+++.|||+|||||||.|+++||+||+||++++|+..||||+|.+||+||++||.++|.
T Consensus 362 ~~~~~v~y~GIIDILq~Y~~~KK~EH~~Ksl~~d~~tIS~v~P~~Ys~RF~dFi~~~~~ 420 (420)
T KOG0229|consen 362 GGYDVVLYIGIIDILQDYDIKKKLEHAYKSLQHDPDTISAVDPKFYAKRFLDFISNIFF 420 (420)
T ss_pred CcceEEEEEEeehhhhhcchhhHHHHHHhhhccCCceeeccCHHHHHHHHHHHHHhhcC
Confidence 26689999999999999999999999999999999999999999999999999998873
No 3
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=2.1e-61 Score=458.43 Aligned_cols=237 Identities=46% Similarity=0.722 Sum_probs=176.1
Q ss_pred ChHhHHHHHhcCCCcchhhhceEEEEEEcCC--eEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCccccccCCccccC
Q 022452 1 MLHEYYIHVKKHENTLITKFFGLHRITLRGG--RKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKDKIKENTTLKDL 78 (297)
Q Consensus 1 lLp~Y~~hl~~np~slL~r~~Gl~~i~~~~~--~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~vlkD~ 78 (297)
+||+||+||.+||+|||+||||||+|++.++ .++|||||+|+|++...|+++||||||+++|.+.+...++.+||||+
T Consensus 100 ~lp~Y~~~~~~n~~SlL~ki~Gly~i~~~~~~~~~~~fiVM~NlF~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~vlkD~ 179 (342)
T smart00330 100 MLPNYYEHIVQNPNTLLPKFFGLYRVKVKGGTEKKIYFLVMENLFYSDLKVHRKYDLKGSTRGREADKKKVKELPVLKDL 179 (342)
T ss_pred HHHHHHHHHHhCCCcchhhhcEEEEEEECCCcceeEEEEEEecCCCCCCceeEEEECCCCCCCCCcCccccCCCCccccc
Confidence 5899999999999999999999999999766 68999999999998889999999999999999987666678999999
Q ss_pred CCc----cccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCCCCccCCCC
Q 022452 79 DLS----FEFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRTDGIIGSQG 154 (297)
Q Consensus 79 d~~----~~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (297)
||. .+|+|+++.+++|++||++||+||+++||||||||||||..+....... +. ......+..+.
T Consensus 180 df~~~~~~~i~l~~~~k~~l~~ql~~D~~FL~~~~imDYSLLvGi~~~~~~~~~~~-~~----------~~~~~~~~~~~ 248 (342)
T smart00330 180 DLVEMWNQPIYVDPLAKKALLKQIKRDCEFLESLKIMDYSLLVGIHDIERGQREEI-EL----------PPVYGSDESPS 248 (342)
T ss_pred chhhccCCeEEECHHHHHHHHHHHHHHHHHHHHccchhhhhhhccccccccchhcc-cc----------ccccccccccc
Confidence 998 5799999999999999999999999999999999999998654321110 00 00000000000
Q ss_pred cccCCCCCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCccCcccccc
Q 022452 155 ELIIPPKGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNECDSNEVEL 234 (297)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~~~~~~~~ 234 (297)
+ ...+.+.. .... .+............+|+ +|+++. ..
T Consensus 249 ~-----------------~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~---~~---------- 286 (342)
T smart00330 249 S-----------------ESSNGGKA------PDIT-----GNLLVSNSPDGDGPFGG-IPARAI---RA---------- 286 (342)
T ss_pred c-----------------cccccCCC------cccc-----ccccccccccccccccc-cccccc---cC----------
Confidence 0 00000000 0000 00000000000111222 444432 11
Q ss_pred cccceeEEEEeEEeeecccchhHHHHHHHHhhcCCCCCceeeChhHHHHHHHHHHhccC
Q 022452 235 FEVYDVVLYMGIIDILQEYNVKKKIEHAFKSLQFDPQLISVVEPKFYASRFINFLKKKF 293 (297)
Q Consensus 235 ~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ksl~~d~~~iS~v~P~~Ya~RF~~f~~~iF 293 (297)
.+.+||||||||||+||++||+||++|++.+++++||||||+.|++||++||++||
T Consensus 287 ---~~~vy~iGIID~Lq~Y~~~KklE~~~K~~~~~~~~iS~V~P~~Y~~RF~~fi~~~F 342 (342)
T smart00330 287 ---RRVVLYLGIIDILQTYTWDKKLEHWVKSIGHDGKTISVVHPEQYAKRFRDFMDKYF 342 (342)
T ss_pred ---CceEEEEEEEEEEEeCCHhHHHHHHHHHhccCCCCcceECHHHHHHHHHHHHHhhC
Confidence 14699999999999999999999999999999999999999999999999999998
No 4
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=6.7e-61 Score=449.93 Aligned_cols=178 Identities=50% Similarity=0.785 Sum_probs=165.8
Q ss_pred ChHhHHHHHhcCC-CcchhhhceEEEEEEc--CCeEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCcc-ccccCCccc
Q 022452 1 MLHEYYIHVKKHE-NTLITKFFGLHRITLR--GGRKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKD-KIKENTTLK 76 (297)
Q Consensus 1 lLp~Y~~hl~~np-~slL~r~~Gl~~i~~~--~~~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~-~~~~~~vlk 76 (297)
+||+||+||.+|| +|||+||||||+|++. .++++|||||+|+|+++..||++||||||+++|.+.+. ..++.+|||
T Consensus 127 ~Lp~Y~~~~~~n~~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlK 206 (313)
T cd00139 127 FLPNYYEYITQNPQNTLLPKFFGLYRVKVKSGTGKKVDFLVMENLFYSRLKIHRKYDLKGSTRNREASKKEKQKENPVLK 206 (313)
T ss_pred HHHHHHHHHHhCCCCcchhhheEEEEEEEcCCCCceEEEEEEecCCCCCccceEEEECCCCCCCCCcCcccccCCccccc
Confidence 5899999999999 9999999999999987 47899999999999988899999999999999998873 456779999
Q ss_pred cCCCcc----ccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCCCCccCC
Q 022452 77 DLDLSF----EFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRTDGIIGS 152 (297)
Q Consensus 77 D~d~~~----~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (297)
|+||.. +|.|+++.++.|++||++||+||+++||||||||||||..
T Consensus 207 D~df~~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~iMDYSLLvGi~~~------------------------------ 256 (313)
T cd00139 207 DLNLLEMIEQPLFVGEHSKKALLTQIKRDCEFLESLNIMDYSLLVGIHDI------------------------------ 256 (313)
T ss_pred hhhhHhhcCceEEeCHHHHHHHHHHHHHHHHHHHHCCCcccceEEEEecC------------------------------
Confidence 999976 8999999999999999999999999999999999999941
Q ss_pred CCcccCCCCCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCccCcccc
Q 022452 153 QGELIIPPKGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNECDSNEV 232 (297)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~~~~~~ 232 (297)
T Consensus 257 -------------------------------------------------------------------------------- 256 (313)
T cd00139 257 -------------------------------------------------------------------------------- 256 (313)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccceeEEEEeEEeeecccchhHHHHHHHHhhcCCC-CCceeeChhHHHHHHHHHHhccCC
Q 022452 233 ELFEVYDVVLYMGIIDILQEYNVKKKIEHAFKSLQFDP-QLISVVEPKFYASRFINFLKKKFP 294 (297)
Q Consensus 233 ~~~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ksl~~d~-~~iS~v~P~~Ya~RF~~f~~~iF~ 294 (297)
+.+||+|||||||+||++||+||++|++.+++ .+||||||++|++||++||+++|.
T Consensus 257 ------~~i~~~GIID~L~~y~~~Kk~E~~~K~~~~~~~~~iS~v~P~~Y~~RF~~fi~~~f~ 313 (313)
T cd00139 257 ------RLVLYLGIIDILRTYTWDKKLEHWVKSLGHDGGKTPSVVSPEQYAKRFREFMDKYFL 313 (313)
T ss_pred ------CceEEEEEEeeeeeCCHHHHHHHHHHHhccCCCCCcceECHHHHHHHHHHHHHHhcC
Confidence 12799999999999999999999999999887 999999999999999999999984
No 5
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=3.1e-59 Score=427.95 Aligned_cols=201 Identities=44% Similarity=0.681 Sum_probs=129.6
Q ss_pred ChHhHHHHHhcCCCcchhhhceEEEEEEcCC-eEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCcc-ccccCCccccC
Q 022452 1 MLHEYYIHVKKHENTLITKFFGLHRITLRGG-RKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKD-KIKENTTLKDL 78 (297)
Q Consensus 1 lLp~Y~~hl~~np~slL~r~~Gl~~i~~~~~-~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~-~~~~~~vlkD~ 78 (297)
+||+||+||.+||+|||+||||+|+|+..+| +++|||||+|+|++...|+++||||||+++|.+.+. ......|+||+
T Consensus 46 ~lp~Y~~~~~~~~~SlL~r~~Gl~~i~~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~~~~~~~~~~lkD~ 125 (252)
T PF01504_consen 46 ILPAYFEHMSENPNSLLPRFYGLYSIKKSNGKEKIYFVVMENLFYTPRNIHERYDLKGSTVGRKAKKKDREQTEPVLKDL 125 (252)
T ss_dssp HHHHHHHHHHHTTTSSS--EEEEEEE-EETT-EEEEEEEEE-SS-SSS--SEEEEE--SSSSS-S-CHHHCSSS-EEEHH
T ss_pred HHHHHHHHHHhCcCchHHHHHHHheecccCCceeEEEEEECCCccCCcccceEEecCCcccCCCCCccccccccceeecc
Confidence 5899999999999999999999999976666 899999999999988899999999999999999752 12347899999
Q ss_pred CCc---cccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCCCCccCCCCc
Q 022452 79 DLS---FEFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRTDGIIGSQGE 155 (297)
Q Consensus 79 d~~---~~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
||. .+|.|+++.+++|++||++||+||+++||||||||||||............. ..
T Consensus 126 df~~~~~~i~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGi~~~~~~~~~~~~~~--------------------~~ 185 (252)
T PF01504_consen 126 DFIESKRKIHLGPEQKEELLKQLERDTEFLSSHNIMDYSLLVGIHNRDSNEEQENKSS--------------------FP 185 (252)
T ss_dssp HHHHTT--SBS-SCHHHHHHHHHHHHHHHHHHTTEES-EEEEEEEH---HHHHHH-H-----------------------
T ss_pred cccccCcEEEeChHHHHHHHHHHHHHHHHHHhccccccceeEeeeecccccccccccc--------------------cc
Confidence 998 7899999999999999999999999999999999999995432221100000 00
Q ss_pred ccCCCCCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCccCccccccc
Q 022452 156 LIIPPKGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNECDSNEVELF 235 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~~~~~~~~~ 235 (297)
.. .| .++ ..+
T Consensus 186 --~~--------------------------------------------------~~-~~~-------s~~---------- 195 (252)
T PF01504_consen 186 --SY--------------------------------------------------AG-GIM-------SED---------- 195 (252)
T ss_dssp --TT--------------------------------------------------TT-TTC-------CCE----------
T ss_pred --cc--------------------------------------------------cc-cee-------ecC----------
Confidence 00 00 000 001
Q ss_pred ccceeEEEEeEEeeecccchhHHHHHHHHhh-cCCCCCceeeChhHHHHHHHHHHhccC
Q 022452 236 EVYDVVLYMGIIDILQEYNVKKKIEHAFKSL-QFDPQLISVVEPKFYASRFINFLKKKF 293 (297)
Q Consensus 236 ~~~~~iyylGIIDiLq~Y~~~KklE~~~Ksl-~~d~~~iS~v~P~~Ya~RF~~f~~~iF 293 (297)
.+.+||+|||||||+||++|++||++|++ .+++++||||||++||+||++||+++|
T Consensus 196 --~~~vy~~GIID~L~~y~~~K~~E~~~K~~~~~~~~~iS~v~P~~Y~~RF~~~i~~~f 252 (252)
T PF01504_consen 196 --GNEVYYLGIIDILQEYNWKKKLEHFFKSLIKCDGQDISCVPPEEYAERFIKFIESIF 252 (252)
T ss_dssp --TTEEEEEEEE-S-EETT------------------SSS---HHHHHHHHHHHHHHH-
T ss_pred --CCeEEEEEEehheeeccHHHHHHHHHHHHhhcCCCCCcccCHHHHHHHHHHHHHHhC
Confidence 14699999999999999999999999998 567899999999999999999999987
No 6
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=354.30 Aligned_cols=178 Identities=28% Similarity=0.441 Sum_probs=157.5
Q ss_pred ChHhHHHHHhc----CCCcchhhhceEEEEEEcC---C--eEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCcccccc
Q 022452 1 MLHEYYIHVKK----HENTLITKFFGLHRITLRG---G--RKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKDKIKE 71 (297)
Q Consensus 1 lLp~Y~~hl~~----np~slL~r~~Gl~~i~~~~---~--~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~~~~~ 71 (297)
+.|+||+||++ --.|.|+||||+|+|.++. | -|+.++||||||+. ..+.++||||||.++|.+.... +.
T Consensus 1395 FAP~YFkYl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~-r~vsRifDLKGS~RnR~v~~t~-~~ 1472 (1598)
T KOG0230|consen 1395 FAPAYFKYLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYG-RKVSRIFDLKGSLRNRYVPTTS-GA 1472 (1598)
T ss_pred hhHHHHHHHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhc-cccceeeeccchhhhccCCCCC-CC
Confidence 47999999953 2359999999999999973 5 57899999999996 6899999999999999998876 67
Q ss_pred CCccccCCCc-----cccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeeccchhhhhhhhcCCccccCCCCCCCC
Q 022452 72 NTTLKDLDLS-----FEFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFRAPEHLKALLELPTTATNSDSLPRT 146 (297)
Q Consensus 72 ~~vlkD~d~~-----~~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (297)
+.||.|.||. .+|+|....|..|-+++.+||.||++++||||||||||.+.
T Consensus 1473 d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYSLLVGvD~e------------------------ 1528 (1598)
T KOG0230|consen 1473 DEVLLDENLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYSLLVGVDDE------------------------ 1528 (1598)
T ss_pred ceEEecHHHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccceeeeEEEeeCC------------------------
Confidence 8999999985 48999999999999999999999999999999999999741
Q ss_pred CCccCCCCcccCCCCCcceeccCCCCCCCCCCCCCCCCccccccCCCccccccCCCCcccccccCCCCcccccccccCCc
Q 022452 147 DGIIGSQGELIIPPKGLLLVTHEPSFVSTAPGPHIRGSTLRAFSVGDKEVDLLIPGTGRFKVQLGVNMPAQANHKLLDNE 226 (297)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~~~s~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~d~ 226 (297)
T Consensus 1529 -------------------------------------------------------------------------------- 1528 (1598)
T KOG0230|consen 1529 -------------------------------------------------------------------------------- 1528 (1598)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccccccceeEEEEeEEeeecccchhHHHHHHHHhhc--C-CCCCceeeChhHHHHHHHHHHhccCCCC
Q 022452 227 CDSNEVELFEVYDVVLYMGIIDILQEYNVKKKIEHAFKSLQ--F-DPQLISVVEPKFYASRFINFLKKKFPEQ 296 (297)
Q Consensus 227 ~~~~~~~~~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ksl~--~-d~~~iS~v~P~~Ya~RF~~f~~~iF~~~ 296 (297)
+..+++||||++++|||.||||.|.|.-. - .+...++|.|++|..||.++|..+|...
T Consensus 1529 ------------~~ELvlGIIDfiRtYTWDKkLESWVK~sGl~gpk~~~PTVVSP~qYK~RFRkAMd~YfL~V 1589 (1598)
T KOG0230|consen 1529 ------------NNELVLGIIDFIRTYTWDKKLESWVKSSGLGGPKNKQPTVVSPEQYKTRFRKAMDTYFLMV 1589 (1598)
T ss_pred ------------CCeEEEEehHhhhhhhhhhhhhhheeccccccCCCCCCceeCHHHHHHHHHHHHhheeeec
Confidence 01489999999999999999999999742 2 3579999999999999999999999754
No 7
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=310.03 Aligned_cols=120 Identities=35% Similarity=0.539 Sum_probs=99.7
Q ss_pred hHhHHHHHhcCCCcchhhhceEEEEEEcCC------eEEEEEEecCCCCCCCcceeeEeecCCCCCCCCCccccc--cCC
Q 022452 2 LHEYYIHVKKHENTLITKFFGLHRITLRGG------RKVRFVVMGNMFCTELRIHRSYDLKGSTVGRCTDKDKIK--ENT 73 (297)
Q Consensus 2 Lp~Y~~hl~~np~slL~r~~Gl~~i~~~~~------~~~~fvVM~Nif~~~~~i~~~yDLKGS~~~R~~~~~~~~--~~~ 73 (297)
+-.||.|+..||.|+||||||+|+|++..+ .++|||||+|+|+++. +|++||||||+.+|.++..... .-.
T Consensus 405 ~~eY~~~V~~np~T~l~ki~G~yrv~~~~s~~~~k~~K~~fiVMeNlf~~~~-i~~ifDLKGS~~Nr~ve~~gk~~s~l~ 483 (612)
T COG5253 405 IFEYYVHVLFNPLTLLCKIFGFYRVKSRSSISSSKSRKIYFIVMENLFYPHG-IHRIFDLKGSMRNRHVERTGKSMSVLL 483 (612)
T ss_pred HHHHHHHHHcCchHHHHHHhceeEEeccccccccccceeEEEEecccCCCCC-cceEEeccCchhhhhhhhhccccchhc
Confidence 346777788999999999999999999765 7999999999999764 9999999999999998764221 223
Q ss_pred ccccCCCcc--ccccCHHHHHHHHHHHHHhHHHHhhCCcccccceeeeecc
Q 022452 74 TLKDLDLSF--EFQMDKLLREYLFKQISIDCEFLESQQIIDYSLLLGLHFR 122 (297)
Q Consensus 74 vlkD~d~~~--~l~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~ 122 (297)
+.||.||.+ ++.+-..+|+.|+.|+++|+.||+++||||||||||||+.
T Consensus 484 ~mndv~wI~es~~~~~g~~Kk~~~sqv~~Dv~fLsklniMDYSllVgi~~~ 534 (612)
T COG5253 484 DMNDVEWIRESPKIVFGLKKKLLLSQVWNDVLFLSKLNIMDYSLLVGIDDE 534 (612)
T ss_pred cchhHHHHHhCchhhhhHHHHHHHHHHHHHHHHHHHhCccceeEEEEeccc
Confidence 455667864 3333348899999999999999999999999999999974
No 8
>PLN02667 inositol polyphosphate multikinase
Probab=75.78 E-value=3.6 Score=38.76 Aligned_cols=50 Identities=14% Similarity=0.327 Sum_probs=35.3
Q ss_pred hHHHHHhcCC------CcchhhhceEEEEEEcCCeEEEEEEecCCCCCCCcceeeEeec
Q 022452 4 EYYIHVKKHE------NTLITKFFGLHRITLRGGRKVRFVVMGNMFCTELRIHRSYDLK 56 (297)
Q Consensus 4 ~Y~~hl~~np------~slL~r~~Gl~~i~~~~~~~~~fvVM~Nif~~~~~i~~~yDLK 56 (297)
++|+.+...+ ..++++|||...+...+|. .+|||+|+-++ ..--.+-|||
T Consensus 44 ~FY~~~~~~~~~~~~L~~~~P~y~G~~~~~~~~~~--~~i~LeDLt~g-~~~PcVlDlK 99 (286)
T PLN02667 44 AFYESFSSDTRVPDHIRRFFPVFHGTQLVEASDGS--GLLVLEDLLAG-YTKPCVMDVK 99 (286)
T ss_pred HHHHHHhccccchHHHHhhCcccceeEeeccCCCc--eeEEehHHhcC-CCCCeEEEEE
Confidence 4677776543 3678999999888765554 57999999875 3334566666
No 9
>KOG4620 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.84 E-value=24 Score=26.47 Aligned_cols=38 Identities=18% Similarity=0.454 Sum_probs=27.7
Q ss_pred chhHHHHHHHHhhcCCCCCceeeChhHHHHHHHHHHhccCCC
Q 022452 254 NVKKKIEHAFKSLQFDPQLISVVEPKFYASRFINFLKKKFPE 295 (297)
Q Consensus 254 ~~~KklE~~~Ksl~~d~~~iS~v~P~~Ya~RF~~f~~~iF~~ 295 (297)
.+.|.+=|+|..+..-++ -.|..|++||++|+..=|..
T Consensus 6 gLQrqVlhlYR~~lraa~----~Kp~~~~~~~m~fvh~EFrk 43 (80)
T KOG4620|consen 6 GLQRQVLHLYRDLLRAAR----GKPGAEARRWMAFVHAEFRK 43 (80)
T ss_pred HHHHHHHHHHHHHHHHhc----CCCchHHHHHHHHHHHHHHH
Confidence 356777888887654332 36899999999999876653
No 10
>PF10664 NdhM: Cyanobacterial and plastid NDH-1 subunit M; InterPro: IPR018922 The NADH dehydrogenase I complex shuttles electrons from an unknown electron donor, via FMN and iron-sulphur (Fe-S) centres, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in plants is believed to be plastoquinone. The NADH dehydrogenase I complex couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. This entry represents subunit M of the NADH dehydrogenase I complex in cyanobacteria and plant chloroplasts []. ; GO: 0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor, 0055114 oxidation-reduction process
Probab=30.29 E-value=32 Score=27.40 Aligned_cols=21 Identities=33% Similarity=0.593 Sum_probs=17.7
Q ss_pred ecccchhHH---HHHHHHhhcCCC
Q 022452 250 LQEYNVKKK---IEHAFKSLQFDP 270 (297)
Q Consensus 250 Lq~Y~~~Kk---lE~~~Ksl~~d~ 270 (297)
|++||+++- |||+++++...|
T Consensus 63 LtdYnLRrIGSdLE~~iR~LLq~G 86 (108)
T PF10664_consen 63 LTDYNLRRIGSDLEHFIRSLLQAG 86 (108)
T ss_pred chhhhHHHhccHHHHHHHHHHHCC
Confidence 789999985 899999987665
No 11
>PRK13610 photosystem II reaction center protein Psb28; Provisional
Probab=22.91 E-value=43 Score=27.13 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHhcc
Q 022452 279 KFYASRFINFLKKK 292 (297)
Q Consensus 279 ~~Ya~RF~~f~~~i 292 (297)
..=-+||+.||++|
T Consensus 93 ~~~WdRFMRFMeRY 106 (113)
T PRK13610 93 EEAFERFMRFASRY 106 (113)
T ss_pred HHHHHHHHHHHHHH
Confidence 34458999999875
No 12
>PLN00039 photosystem II reaction center Psb28 protein; Provisional
Probab=21.92 E-value=48 Score=26.88 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHhccC
Q 022452 279 KFYASRFINFLKKKF 293 (297)
Q Consensus 279 ~~Ya~RF~~f~~~iF 293 (297)
..=-+||+.||+++=
T Consensus 87 ~~~WdRFMRFMeRYA 101 (111)
T PLN00039 87 PREWDRFMRFMERYA 101 (111)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334589999999863
No 13
>TIGR03047 PS_II_psb28 photosystem II reaction center protein Psb28. Members of this protein family are the Psb28 protein of photosystem II. Two different protein families, apparently without homology between them, have been designated PsbW. Cyanobacterial proteins previously designated PsbW are members of the family described here. However, while members of the plant PsbW family are not found (so far) in Cyanobacteria, members of the present family do occur in plants. We therefore support the alternative designation that has emerged for this protein family, Psp28, rather than PsbW.
Probab=21.39 E-value=50 Score=26.68 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHhccC
Q 022452 279 KFYASRFINFLKKKF 293 (297)
Q Consensus 279 ~~Ya~RF~~f~~~iF 293 (297)
..=-+||+.||+++=
T Consensus 86 ~~~WdRFMRFmeRYA 100 (109)
T TIGR03047 86 EDEWDRFMRFMERYA 100 (109)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334589999999863
No 14
>PF03912 Psb28: Psb28 protein; InterPro: IPR005610 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein Psb28 (PsbW) found in PSII, where it is a subunit of the oxygen-evolving complex. Psb28 appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of Psb28, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 1 Psb28.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009654 oxygen evolving complex, 0016020 membrane; PDB: 2KVO_A.
Probab=21.17 E-value=50 Score=26.64 Aligned_cols=14 Identities=21% Similarity=0.420 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHhcc
Q 022452 279 KFYASRFINFLKKK 292 (297)
Q Consensus 279 ~~Ya~RF~~f~~~i 292 (297)
..=-+||+.||+++
T Consensus 86 ~~~WdRFMRFMeRY 99 (108)
T PF03912_consen 86 EEEWDRFMRFMERY 99 (108)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44458999999876
No 15
>PRK13612 photosystem II reaction center protein Psb28; Provisional
Probab=20.89 E-value=51 Score=26.78 Aligned_cols=15 Identities=20% Similarity=0.370 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHhccC
Q 022452 279 KFYASRFINFLKKKF 293 (297)
Q Consensus 279 ~~Ya~RF~~f~~~iF 293 (297)
..=-+||+.||+++=
T Consensus 89 ~~~WdRFMRFMeRYA 103 (113)
T PRK13612 89 EQEWDRFMRFMERYA 103 (113)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334589999999863
No 16
>CHL00128 psbW photosystem II protein W; Reviewed
Probab=20.55 E-value=53 Score=26.71 Aligned_cols=15 Identities=20% Similarity=0.312 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHhccC
Q 022452 279 KFYASRFINFLKKKF 293 (297)
Q Consensus 279 ~~Ya~RF~~f~~~iF 293 (297)
..=-+||+.||+++=
T Consensus 89 ~~~WdRFMRFMeRYA 103 (113)
T CHL00128 89 PEAWDRFMRFMERYA 103 (113)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334589999999863
Done!