BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022460
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 109 YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSF 168
+NP+L+ N + P P +E + I+LVLDLDETLVH S + + +F
Sbjct: 360 FNPFLFIKQLANATTMPPPVA--LPPKEH-SSPKISLVLDLDETLVHCSTEPLEQPHLTF 416
Query: 169 PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR 228
P+ VF ++RP+ FL V+ +F+V+IFTA Q +YA +LL+++DPN I R
Sbjct: 417 PVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYR 475
Query: 229 VYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
+YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ + F
Sbjct: 476 LYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGF 514
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 311
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 312 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 371
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 372 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAY 415
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKDAD 165
E ++PY + L + + P PL+ P +LVLDLDETLVH S + DA
Sbjct: 247 EVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELDDAA 304
Query: 166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
+FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP + L+
Sbjct: 305 LTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLV 364
Query: 226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 365 RHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 406
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 14/156 (8%)
Query: 120 NLPQIAPSYWPRTPLREPIAGLPI--------TLVLDLDETLVHSSFDNCKDADFSFPIH 171
NLP + R P LP+ TLVLDLDETLVH S +A FP+
Sbjct: 40 NLPPLTEEIMSRCP------ALPVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVV 93
Query: 172 SKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 231
+ V+VR RP+L FL +A F+++IFTA + +YA +L DILDP + I R++R
Sbjct: 94 FQNITYQVYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFR 153
Query: 232 DSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
+ CV G Y+KDLTILGRD ++ I+DN Q + +
Sbjct: 154 EHCVCVFGNYVKDLTILGRDPSKTMILDNAVQSFAY 189
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
TLVLDLDETLVHSSF + DF P+ + + V+V +RP++ FL A+A F++V+F
Sbjct: 138 TLVLDLDETLVHSSFKPVHNPDFIVPVEIEGTIHQVYVVKRPFVDDFLRAIAEKFEIVVF 197
Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
TA + YA +LD LD + +I R++R+SC G Y+KDL+ LGRDL IVDN+P
Sbjct: 198 TASLAKYADPVLDFLDTGR-VIHYRLFRESCHNHKGNYVKDLSRLGRDLKSTIIVDNSPS 256
Query: 264 VYLF 267
YLF
Sbjct: 257 SYLF 260
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
L+LDLDETLVHSSF ADF P+ +V V+V +RP + FL V+ +++VV+FT
Sbjct: 230 LILDLDETLVHSSFKYMHSADFVLPVEIDDQVHNVYVIKRPGVDEFLNRVSQLYEVVVFT 289
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A S YA LLD LDPN T I R++R++C +G Y+K+L+ +GR L+ I+DN+P
Sbjct: 290 ASVSRYANPLLDTLDPNGT-IHHRLFREACYNYEGNYIKNLSQIGRPLSETIILDNSPAS 348
Query: 265 YLF 267
Y+F
Sbjct: 349 YIF 351
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Query: 125 APSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR 184
AP Y P ++ L+LDLDETLVHSSF + ADF + +V V+V +R
Sbjct: 240 APGYNTLLPPQDESTKGKKCLILDLDETLVHSSFKYLRSADFVLSVEIDDQVHNVYVIKR 299
Query: 185 PYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKD 244
P + FLE V +F+VV+FTA S Y LLDILD ++ +I R++R++C +G Y+K+
Sbjct: 300 PGVEEFLERVGKLFEVVVFTASVSRYGDPLLDILDTDK-VIHHRLFREACYNYEGNYIKN 358
Query: 245 LTILGRDLARIAIVDNTPQVYLF 267
L+ +GR L+ I I+DN+P Y+F
Sbjct: 359 LSQIGRPLSDIIILDNSPASYIF 381
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ V V+V +RP++ FL+ + +F+ V+
Sbjct: 91 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 150
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD R++R+SCVF G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 151 FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 209
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
Y+F PD + S++ N S
Sbjct: 210 ASYVFH------PDNAVPVASWFDNMS 230
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ V V+V +RP++ FL+ + +F+ V+
Sbjct: 91 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 150
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD R++R+SCVF G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 151 FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 209
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
Y+F PD + S++ N S
Sbjct: 210 ASYVFH------PDNAVPVASWFDNMS 230
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 108 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGELFECVLFT 167
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 168 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 226
Query: 265 YLF 267
Y+F
Sbjct: 227 YIF 229
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 109 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 168
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 169 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 227
Query: 265 YLF 267
Y+F
Sbjct: 228 YIF 230
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 109 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 168
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 169 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 227
Query: 265 YLF 267
Y+F
Sbjct: 228 YIF 230
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF PI + V+V +RPY+ FL + +F+ V+
Sbjct: 102 ICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 161
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD + R++R+SCVF G Y+KDL+ LGRDL + I+DN+P
Sbjct: 162 FTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSP 220
Query: 263 QVYLF 267
Y+F
Sbjct: 221 ASYIF 225
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ + V+V +RPY+ FL + +F+ V+
Sbjct: 101 ICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 160
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD + R++R++CVF G Y+KDL+ LGRDL + I+DN+P
Sbjct: 161 FTASLAKYADPVTDLLD-RCGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSP 219
Query: 263 QVYLF 267
Y+F
Sbjct: 220 ASYIF 224
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
L+LDLDETLVHSSF + ADF I V V +RP + FL+ + MF++V+FT
Sbjct: 160 LILDLDETLVHSSFKYIEPADFVVSIEIDGLQHDVRVVKRPGVDEFLKKMGDMFEIVVFT 219
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA +LD+LD + +I R++R++C +G ++KDL+ LGR+L I+DN+P
Sbjct: 220 ASLAKYADPVLDMLD-HSHVIRHRLFREACCNYEGNFVKDLSQLGRNLEDSIIIDNSPSS 278
Query: 265 YLF 267
Y+F
Sbjct: 279 YIF 281
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 65 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 124
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 125 WYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCTLDSGSYIKDLSVVHDDLSSVV 184
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 185 ILDNSPGAY 193
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 65 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 124
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 125 WYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLSSIV 184
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 185 ILDNSPGAY 193
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 144 TLVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 63 VLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVS 122
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 123 QWYELVVFTASMEIYGSAVADKLDNNKGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSV 182
Query: 256 AIVDNTPQVY 265
I+DN+P Y
Sbjct: 183 VILDNSPGAY 192
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 184 ILDNSPGAY 192
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 184 ILDNSPGAY 192
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 144 TLVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 63 VLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVS 122
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 123 QWYELVVFTASMEIYGSAVADKLDNNRGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSV 182
Query: 256 AIVDNTPQVY 265
I+DN+P Y
Sbjct: 183 VILDNSPGAY 192
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 184 ILDNSPGAY 192
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 184 ILDNSPGAY 192
>sp|Q29I63|CNEP1_DROPS CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1
Length = 243
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 144 TLVLDLDETLVHSSFDNCKD--------ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
TLVLDLDETL+HS + DF+ + FV +RP++ FL+ V+
Sbjct: 62 TLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVS 121
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+D+V+FTA IY + D LD + ++ +R YR C G Y KDL+ + DL RI
Sbjct: 122 QWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRI 181
Query: 256 AIVDNTPQVY 265
I+DN+P Y
Sbjct: 182 FIIDNSPGAY 191
>sp|Q9VRG7|CNEP1_DROME CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
melanogaster GN=l(1)G0269 PE=2 SV=1
Length = 243
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 144 TLVLDLDETLVHSSFDNCKD--------ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
TLVLDLDETL+HS + DF+ + FV +RP++ FL+ V+
Sbjct: 62 TLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVS 121
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+D+V+FTA IY + D LD + ++ +R YR C G Y KDL+ + DL RI
Sbjct: 122 QWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRI 181
Query: 256 AIVDNTPQVY 265
I+DN+P Y
Sbjct: 182 FIIDNSPGAY 191
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 144 TLVLDLDETLVHS-SFDNCKDADFSFPIHSKMEVQTVF-VRQRPYLHMFLEAVASMFDVV 201
TLVLDLDETL+HS S + + +H E ++ + +RP+L FL V+ F ++
Sbjct: 305 TLVLDLDETLIHSVSRGSRTTSGQPIEVHVPGEHPILYYIHKRPHLDYFLSNVSQWFRLI 364
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+FTA YA ++D L+ ++ + +R YR C D ++KD++I L+RI I+DN+
Sbjct: 365 LFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISICNIHLSRIMIIDNS 424
Query: 262 PQVY 265
P Y
Sbjct: 425 PASY 428
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D +DF+ + V +RP++ FL V+
Sbjct: 60 LVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLTVVSQ 119
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA +Y + D LD + ++ +R +R C G Y KDL+ + DL+ I
Sbjct: 120 WYELVVFTASMEVYGSSVADKLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSIC 179
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 180 ILDNSPGAY 188
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D +DF+ + V +RP++ FL V+
Sbjct: 60 LVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLSVVSQ 119
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA +Y + D LD + ++ +R +R C G Y KDL+ + DL+ I
Sbjct: 120 WYELVVFTASMEVYGTSVADRLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSIC 179
Query: 257 IVDNTPQVY 265
I+DN+P Y
Sbjct: 180 ILDNSPGAY 188
>sp|Q3SZB3|TIM50_BOVIN Mitochondrial import inner membrane translocase subunit TIM50
OS=Bos taurus GN=TIMM50 PE=2 SV=1
Length = 355
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PLREP P TLVL+L L+H + F ++RP + +
Sbjct: 140 PLREPYYQPPYTLVLELTGVLLHPEWSLATGWRF---------------KKRPGIETLFQ 184
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+A ++++VIFT+ + A L+D +DP+ I R++RD+ + DG ++KD++ L RD
Sbjct: 185 QLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRLFRDATRYMDGHHVKDISCLNRDP 243
Query: 253 ARIAIVDNTPQVYLFLSY 270
AR+ +VD + + Y
Sbjct: 244 ARVVVVDCKKEAFRLQPY 261
>sp|Q9W0S3|TI50B_DROME Mitochondrial import inner membrane translocase subunit TIM50-B
OS=Drosophila melanogaster GN=ttm2 PE=2 SV=1
Length = 409
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 16/127 (12%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL+ P P TLVL++ + LVH D+++ + ++RP + +FL+
Sbjct: 200 PLQPPYVQPPYTLVLEIKDVLVH--------PDWTYETGWRF-------KKRPGVDVFLK 244
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
A F++V++TA Q + L+D LDPN ++ R+ RDS F G ++K+L L RDL
Sbjct: 245 ECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIM-YRLVRDSTHFDGGHHVKNLDNLNRDL 303
Query: 253 ARIAIVD 259
R+ +VD
Sbjct: 304 KRVVVVD 310
>sp|Q59W44|TIM50_CANAL Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM50 PE=3 SV=1
Length = 469
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 15/118 (12%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLV+ LD+ L+HS++D +RP L FL ++ +++V
Sbjct: 187 PLTLVVTLDDFLIHSNWDTQ---------------HGWRTGKRPGLDYFLGYLSQYYEIV 231
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD 259
+F++ IY+ + ++ LDP I ++R++C + DG+ +KDL++L RDL + ++D
Sbjct: 232 VFSSNSQIYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLGKTVMID 289
>sp|Q4PEW9|TIM50_USTMA Mitochondrial import inner membrane translocase subunit TIM50
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM50
PE=3 SV=1
Length = 493
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P T+V+D+D+ LVHS + + +RP L FL ++ +++V
Sbjct: 220 PFTMVIDIDDLLVHSEWSREHGWRTA---------------KRPGLDHFLGYLSQFYEIV 264
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+FT AG +++ LDP++ I ++R+SC DG+ +KDL L RDL+++ +VD
Sbjct: 265 LFTTQPFFTAGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHLNRDLSKVVVVDTN 324
Query: 262 PQVY 265
P +
Sbjct: 325 PDSF 328
>sp|Q3ZCQ8|TIM50_HUMAN Mitochondrial import inner membrane translocase subunit TIM50
OS=Homo sapiens GN=TIMM50 PE=1 SV=2
Length = 353
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL+EP P TLVL+L L+H + F ++RP + +
Sbjct: 138 PLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRF---------------KKRPGIETLFQ 182
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+A ++++VIFT+ + A L+D +DP+ I R++RD+ + DG ++KD++ L RD
Sbjct: 183 QLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRLFRDATRYMDGHHVKDISCLNRDP 241
Query: 253 ARIAIVDNTPQVYLFLSY 270
AR+ +VD + + Y
Sbjct: 242 ARVVVVDCKKEAFRLQPY 259
>sp|Q9D880|TIM50_MOUSE Mitochondrial import inner membrane translocase subunit TIM50
OS=Mus musculus GN=Timm50 PE=1 SV=1
Length = 353
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PLREP P TLVL+L L+H + F ++RP + +
Sbjct: 138 PLREPYYQPPYTLVLELTGVLLHPEWSLATGWRF---------------KKRPGIETLFQ 182
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+A ++++VIFT+ + A L+D +DP+ I R++RD+ + +G ++KD++ L RD
Sbjct: 183 QLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRLFRDATRYMEGHHVKDISCLNRDP 241
Query: 253 ARIAIVD 259
AR+ +VD
Sbjct: 242 ARVVVVD 248
>sp|Q5RAJ8|TIM50_PONAB Mitochondrial import inner membrane translocase subunit TIM50
OS=Pongo abelii GN=TIMM50 PE=2 SV=1
Length = 353
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL+EP P TLVL+L L+H + F ++RP + +
Sbjct: 138 PLQEPYYQPPYTLVLELTGVLLHLEWSLATGWRF---------------KKRPGIETLFQ 182
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+A ++++VIFT+ + A L+D +DP+ I R++RD+ + DG ++KD++ L RD
Sbjct: 183 QLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRLFRDATRYMDGHHVKDISCLNRDP 241
Query: 253 ARIAIVDNTPQVYLFLSY 270
AR+ +VD + + Y
Sbjct: 242 ARVVVVDCKKEAFRLQPY 259
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
Query: 145 LVLDLDETLVHSSFDNCKDADFS--FPIHSKMEVQTV----FVRQRPYLHMFLEAVASMF 198
LV+DLDETL+HS+ + ++ S + K + + F+ +RPY +FL V+ +
Sbjct: 254 LVIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRTLYFIHKRPYCDLFLTKVSKWY 313
Query: 199 DVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYRDSCVFADG-EYLKDLTIL-------- 248
D++IFTA YA ++D L+ + + +R YR CV DG Y+KDL+I+
Sbjct: 314 DLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDGVGYIKDLSIVKDSEENGK 373
Query: 249 --GRDLARIAIVDNTPQVY 265
L + I+DN+P Y
Sbjct: 374 GSSSSLDDVIIIDNSPVSY 392
>sp|Q6FRX4|TIM50_CANGA Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM50 PE=3 SV=1
Length = 485
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 15/124 (12%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLV+ L++ LVHS +D K +T +RP FL ++ +++V
Sbjct: 197 PLTLVITLEDFLVHSEWD------------QKHGWRTA---KRPGADYFLGYLSQYYEIV 241
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+F++ +YA ++ + +DP I ++++ CV+ DG ++KDL+ L RDL ++ I+D
Sbjct: 242 LFSSNYMMYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIIDTD 301
Query: 262 PQVY 265
Y
Sbjct: 302 ENSY 305
>sp|Q6NWD4|TIM50_DANRE Mitochondrial import inner membrane translocase subunit TIM50
OS=Danio rerio GN=timm50 PE=2 SV=2
Length = 387
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADF 166
+Y+ Y + P++ P PLREP P TLVL+L + L+H + F
Sbjct: 152 KYFKDYRQMIIEPTSPKLLPD-----PLREPYYQPPYTLVLELTDVLLHPEWSLATGWRF 206
Query: 167 SFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG 226
++RP + + +A ++++VIFT+ + A L+D +DP Q +
Sbjct: 207 ---------------KKRPGIDYLFQQLAPLYEIVIFTSETGMTAYPLIDSIDP-QGFVM 250
Query: 227 QRVYRDSCVFADGEYLKDLTILGRDLARIAIVD 259
R++RD+ + +G ++KD++ L RD +++ +VD
Sbjct: 251 YRLFRDATRYMEGHHVKDVSCLNRDTSKVIVVD 283
>sp|Q9W4V8|TI50C_DROME Mitochondrial import inner membrane translocase subunit TIM50-C
OS=Drosophila melanogaster GN=ttm50 PE=2 SV=2
Length = 428
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL+ P TLVL++ + LVH + F ++RP + FL
Sbjct: 219 PLKPPYVQPRYTLVLEMKDVLVHPDWTYQTGWRF---------------KKRPGVDHFLA 263
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
A F++V+FTA Q + +LD LDPN I R+ RD+ F DG ++K+L L RDL
Sbjct: 264 ECAKDFEIVVFTAEQGMTVFPILDALDPN-GYIMYRLVRDATHFVDGHHVKNLDNLNRDL 322
Query: 253 ARIAIVD 259
++ +VD
Sbjct: 323 KKVIVVD 329
>sp|Q6BVY9|TIM50_DEBHA Mitochondrial import inner membrane translocase subunit TIM50
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM50 PE=3 SV=1
Length = 471
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 25/139 (17%)
Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
LP AP + R P+TLV+ LD+ L+HS +D +K +T
Sbjct: 178 LPPPAPEAYRR----------PLTLVVTLDDLLIHSDWD------------TKHGWRTG- 214
Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
+RP L FL ++ +++VIF + +Y+ + LDP + ++R++C + DG+
Sbjct: 215 --KRPGLDYFLGYLSQYYEIVIFGSNYQMYSENTVGKLDPFHAYVSYALFREACRYKDGK 272
Query: 241 YLKDLTILGRDLARIAIVD 259
+KDL++L RDL + ++D
Sbjct: 273 LVKDLSLLNRDLGKTVLID 291
>sp|Q5B4P0|TIM50_EMENI Mitochondrial import inner membrane translocase subunit tim50
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=tim50 PE=3 SV=1
Length = 532
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 28/171 (16%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
P +P P TLVL L++ LVHS + V +RP + FL
Sbjct: 242 PDEDPNLRQPYTLVLSLEDLLVHSEWSR---------------EHGWRVAKRPGVDYFLR 286
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+ +++V+FT+ S+ A Q+L LDP + +I ++R++ + DGEY+KDL+ L RDL
Sbjct: 287 YLNQYYELVLFTSVPSMMADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSYLNRDL 345
Query: 253 ARIAIVDNT-------PQVYLFLSYINYPPD-----ILIIYLSFYINASLD 291
+++ ++D P+ + L N P LI +L + +D
Sbjct: 346 SKVILIDTKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVD 396
>sp|O13636|TIM50_SCHPO Mitochondrial import inner membrane translocase subunit tim50
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim50 PE=3 SV=1
Length = 452
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL EP P TLVL LD+ L+HS + +RP L FL
Sbjct: 168 PLPEPY-NRPYTLVLSLDDLLIHSEWTRQ---------------HGWRTAKRPGLDYFLG 211
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
++ ++VVIFT A ++D +DP I + R+S + G+ +KDL+ L RDL
Sbjct: 212 YLSMYYEVVIFTRQYLATAKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYLNRDL 271
Query: 253 ARIAIVDNTPQVY 265
+R+ ++D P+ +
Sbjct: 272 SRVIMIDTNPESW 284
>sp|Q75A73|TIM50_ASHGO Mitochondrial import inner membrane translocase subunit TIM50
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM50 PE=3 SV=2
Length = 476
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLVL L++ VHS + + +RP FL ++ +++V
Sbjct: 190 PLTLVLPLEDFFVHSEW---------------TQQHGWRTAKRPGADYFLGYLSQYYEIV 234
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+F++ +Y+ ++++ LDP + I +++D CV+ DG ++KDL+ L RDL + I+D
Sbjct: 235 LFSSNYMVYSEKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLGKTLIIDTD 294
Query: 262 P 262
P
Sbjct: 295 P 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,915,004
Number of Sequences: 539616
Number of extensions: 5118423
Number of successful extensions: 9182
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9027
Number of HSP's gapped (non-prelim): 91
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)