Query 022460
Match_columns 297
No_of_seqs 207 out of 1085
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 03:42:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022460.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022460hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1.1E-43 2.4E-48 329.3 11.6 161 132-292 79-249 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 9.3E-40 2E-44 282.9 16.0 152 142-293 1-161 (162)
3 PF03031 NIF: NLI interacting 100.0 1.6E-36 3.5E-41 258.3 15.3 147 143-293 1-156 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 2.3E-32 5E-37 244.4 13.3 141 139-295 18-184 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 2.3E-31 5E-36 253.8 12.7 151 125-291 169-330 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 4.1E-30 8.9E-35 222.1 10.8 127 139-268 3-143 (156)
7 COG5190 FCP1 TFIIF-interacting 99.9 8.3E-27 1.8E-31 226.5 7.6 160 131-291 200-368 (390)
8 smart00577 CPDc catalytic doma 99.9 2.8E-24 6.1E-29 182.7 13.6 137 141-277 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 9.9E-19 2.1E-23 178.5 9.9 126 140-268 144-286 (635)
10 COG5190 FCP1 TFIIF-interacting 98.6 1.8E-08 3.9E-13 98.9 4.0 125 139-265 23-158 (390)
11 COG4996 Predicted phosphatase 98.4 4.4E-07 9.6E-12 77.3 5.7 122 144-267 2-131 (164)
12 TIGR01681 HAD-SF-IIIC HAD-supe 98.3 2.5E-07 5.5E-12 77.0 1.8 110 143-264 1-120 (128)
13 cd01427 HAD_like Haloacid deha 98.2 1.1E-06 2.3E-11 69.5 3.1 103 144-262 1-123 (139)
14 TIGR01685 MDP-1 magnesium-depe 98.2 3.3E-06 7E-11 74.7 6.0 121 143-265 3-143 (174)
15 TIGR01684 viral_ppase viral ph 97.9 2.1E-05 4.5E-10 75.1 6.6 72 140-233 124-197 (301)
16 TIGR01662 HAD-SF-IIIA HAD-supe 97.9 2.2E-05 4.7E-10 64.5 5.3 101 143-261 1-112 (132)
17 TIGR01686 FkbH FkbH-like domai 97.9 1.4E-05 3E-10 76.2 4.4 108 141-263 2-114 (320)
18 PHA03398 viral phosphatase sup 97.8 4.2E-05 9.1E-10 73.1 6.9 73 140-234 126-200 (303)
19 PRK14988 GMP/IMP nucleotidase; 97.6 2.2E-05 4.7E-10 71.0 1.2 82 181-263 92-177 (224)
20 PF12689 Acid_PPase: Acid Phos 97.6 8.8E-05 1.9E-09 65.5 4.7 119 142-263 3-135 (169)
21 TIGR01656 Histidinol-ppas hist 97.5 0.00019 4.1E-09 60.7 6.1 104 143-262 1-128 (147)
22 TIGR00213 GmhB_yaeD D,D-heptos 97.5 0.00017 3.7E-09 62.6 5.3 103 143-263 2-134 (176)
23 PRK08942 D,D-heptose 1,7-bisph 97.5 0.00014 3E-09 63.3 4.5 104 142-262 3-130 (181)
24 TIGR01261 hisB_Nterm histidino 97.4 0.0003 6.5E-09 61.1 6.3 105 143-262 2-130 (161)
25 PHA02530 pseT polynucleotide k 97.3 0.00018 3.9E-09 67.0 3.8 114 140-264 156-281 (300)
26 PF05152 DUF705: Protein of un 97.3 0.00065 1.4E-08 64.6 7.2 72 140-233 120-193 (297)
27 TIGR01664 DNA-3'-Pase DNA 3'-p 97.1 0.0013 2.9E-08 57.2 6.9 107 142-262 13-137 (166)
28 TIGR01689 EcbF-BcbF capsule bi 97.1 0.0016 3.4E-08 54.9 6.5 73 143-232 2-87 (126)
29 TIGR01668 YqeG_hyp_ppase HAD s 97.0 0.0015 3.2E-08 56.8 5.8 95 140-263 23-119 (170)
30 PF13419 HAD_2: Haloacid dehal 96.9 0.00091 2E-08 55.3 3.7 84 179-263 74-161 (176)
31 TIGR02253 CTE7 HAD superfamily 96.8 0.0012 2.6E-08 58.3 3.6 82 180-262 92-177 (221)
32 TIGR01672 AphA HAD superfamily 96.7 0.0022 4.8E-08 59.4 4.8 94 139-233 60-169 (237)
33 PRK05446 imidazole glycerol-ph 96.7 0.0044 9.6E-08 60.6 7.0 107 141-262 1-131 (354)
34 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0018 3.9E-08 54.9 3.4 81 181-263 84-168 (183)
35 PRK13582 thrH phosphoserine ph 96.6 0.00074 1.6E-08 59.0 0.8 83 180-263 66-155 (205)
36 PRK06769 hypothetical protein; 96.5 0.0035 7.5E-08 54.6 4.7 102 143-262 5-120 (173)
37 TIGR02254 YjjG/YfnB HAD superf 96.4 0.0036 7.9E-08 55.0 4.3 81 181-262 96-180 (224)
38 TIGR01993 Pyr-5-nucltdase pyri 96.4 0.0015 3.3E-08 56.4 1.7 80 181-263 83-169 (184)
39 TIGR01670 YrbI-phosphatas 3-de 96.4 0.0048 1E-07 52.7 4.6 100 143-262 2-102 (154)
40 TIGR01449 PGP_bact 2-phosphogl 96.3 0.004 8.6E-08 54.5 3.7 83 180-263 83-169 (213)
41 TIGR01663 PNK-3'Pase polynucle 96.2 0.0068 1.5E-07 62.2 5.6 109 140-262 166-294 (526)
42 PRK13288 pyrophosphatase PpaX; 96.2 0.0056 1.2E-07 54.1 4.4 83 180-263 80-166 (214)
43 PLN03243 haloacid dehalogenase 96.2 0.0041 8.9E-08 57.9 3.6 82 181-263 108-193 (260)
44 PRK09449 dUMP phosphatase; Pro 96.2 0.0056 1.2E-07 54.3 4.0 82 181-263 94-179 (224)
45 PLN02770 haloacid dehalogenase 96.1 0.0052 1.1E-07 56.2 3.8 81 181-262 107-191 (248)
46 TIGR01428 HAD_type_II 2-haloal 96.1 0.0051 1.1E-07 53.6 3.5 81 181-262 91-175 (198)
47 TIGR01454 AHBA_synth_RP 3-amin 96.1 0.0076 1.6E-07 52.9 4.4 83 180-263 73-159 (205)
48 PRK11009 aphA acid phosphatase 96.0 0.02 4.3E-07 53.1 7.0 93 139-232 60-170 (237)
49 KOG3109 Haloacid dehalogenase- 96.0 0.0044 9.5E-08 57.2 2.5 83 181-265 99-191 (244)
50 PRK08238 hypothetical protein; 95.7 0.0075 1.6E-07 61.2 3.1 47 182-232 72-119 (479)
51 PRK13222 phosphoglycolate phos 95.6 0.014 3.1E-07 51.3 4.3 83 180-263 91-177 (226)
52 PRK13226 phosphoglycolate phos 95.5 0.017 3.8E-07 52.0 4.4 83 180-263 93-179 (229)
53 PRK11587 putative phosphatase; 95.5 0.024 5.2E-07 50.5 5.1 82 180-263 81-166 (218)
54 COG0637 Predicted phosphatase/ 95.5 0.0075 1.6E-07 54.6 1.9 81 181-262 85-169 (221)
55 PRK10826 2-deoxyglucose-6-phos 95.5 0.012 2.7E-07 52.3 3.2 82 181-263 91-176 (222)
56 TIGR02009 PGMB-YQAB-SF beta-ph 95.5 0.0095 2.1E-07 50.9 2.4 80 181-263 87-170 (185)
57 TIGR01533 lipo_e_P4 5'-nucleot 95.4 0.015 3.2E-07 54.9 3.8 93 140-233 73-173 (266)
58 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.4 0.03 6.5E-07 51.0 5.5 66 142-231 8-76 (242)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 95.3 0.04 8.6E-07 47.5 6.0 81 181-262 79-173 (201)
60 TIGR01422 phosphonatase phosph 95.3 0.019 4.1E-07 52.2 3.9 82 181-263 98-185 (253)
61 PLN02575 haloacid dehalogenase 95.2 0.021 4.5E-07 56.6 4.1 82 181-263 215-300 (381)
62 PRK09456 ?-D-glucose-1-phospha 95.2 0.016 3.6E-07 50.8 3.0 85 180-264 82-170 (199)
63 PRK10725 fructose-1-P/6-phosph 95.0 0.017 3.7E-07 49.6 2.7 81 181-263 87-170 (188)
64 TIGR02252 DREG-2 REG-2-like, H 95.0 0.032 6.9E-07 48.7 4.3 79 182-262 105-187 (203)
65 PRK13223 phosphoglycolate phos 94.8 0.031 6.7E-07 52.1 4.1 82 181-263 100-185 (272)
66 PRK09484 3-deoxy-D-manno-octul 94.8 0.041 8.9E-07 48.3 4.5 102 141-262 20-122 (183)
67 PF13344 Hydrolase_6: Haloacid 94.7 0.076 1.6E-06 42.6 5.6 54 145-222 1-55 (101)
68 TIGR01548 HAD-SF-IA-hyp1 haloa 94.7 0.042 9.2E-07 48.0 4.4 79 183-262 107-188 (197)
69 PF08645 PNK3P: Polynucleotide 94.7 0.06 1.3E-06 46.7 5.1 50 143-206 1-54 (159)
70 TIGR02247 HAD-1A3-hyp Epoxide 94.6 0.023 5E-07 50.0 2.6 83 180-263 92-180 (211)
71 TIGR01549 HAD-SF-IA-v1 haloaci 94.6 0.058 1.3E-06 44.9 4.8 79 180-262 62-144 (154)
72 TIGR03351 PhnX-like phosphonat 94.6 0.027 5.9E-07 49.8 3.0 82 181-262 86-173 (220)
73 COG1011 Predicted hydrolase (H 94.5 0.044 9.6E-07 48.2 4.1 84 181-265 98-184 (229)
74 TIGR00338 serB phosphoserine p 94.5 0.034 7.4E-07 49.1 3.4 82 181-263 84-179 (219)
75 PHA02597 30.2 hypothetical pro 94.5 0.028 6E-07 49.0 2.8 81 181-263 73-156 (197)
76 PRK13225 phosphoglycolate phos 94.3 0.035 7.6E-07 52.1 3.2 82 181-263 141-223 (273)
77 COG0561 Cof Predicted hydrolas 94.2 0.12 2.6E-06 47.2 6.4 58 142-222 3-61 (264)
78 PLN02779 haloacid dehalogenase 94.0 0.06 1.3E-06 50.7 4.1 82 181-263 143-230 (286)
79 TIGR01544 HAD-SF-IE haloacid d 94.0 0.11 2.4E-06 49.4 5.8 84 180-263 119-222 (277)
80 PLN02940 riboflavin kinase 94.0 0.039 8.4E-07 54.2 2.8 82 181-263 92-178 (382)
81 PRK13478 phosphonoacetaldehyde 94.0 0.077 1.7E-06 48.8 4.7 83 181-263 100-187 (267)
82 TIGR03333 salvage_mtnX 2-hydro 93.8 0.11 2.3E-06 46.4 5.2 47 180-226 68-115 (214)
83 PRK00192 mannosyl-3-phosphogly 93.8 0.14 3E-06 47.4 6.1 57 142-221 4-61 (273)
84 PRK10563 6-phosphogluconate ph 93.8 0.029 6.3E-07 49.7 1.5 82 180-264 86-171 (221)
85 PRK09552 mtnX 2-hydroxy-3-keto 93.6 0.17 3.6E-06 45.2 6.1 83 181-263 73-171 (219)
86 COG0241 HisB Histidinol phosph 93.5 0.11 2.5E-06 46.4 4.6 107 142-262 5-132 (181)
87 PF08282 Hydrolase_3: haloacid 93.3 0.12 2.7E-06 45.1 4.5 52 145-219 1-53 (254)
88 TIGR01990 bPGM beta-phosphoglu 93.2 0.083 1.8E-06 45.0 3.3 80 181-263 86-169 (185)
89 TIGR01487 SPP-like sucrose-pho 93.1 0.24 5.2E-06 43.9 6.1 57 143-222 2-59 (215)
90 PLN02811 hydrolase 93.0 0.073 1.6E-06 47.5 2.7 82 181-263 77-168 (220)
91 TIGR01691 enolase-ppase 2,3-di 92.9 0.092 2E-06 48.0 3.3 84 180-263 93-180 (220)
92 PRK03669 mannosyl-3-phosphogly 92.9 0.23 5E-06 45.9 5.9 59 140-221 5-64 (271)
93 PTZ00445 p36-lilke protein; Pr 92.8 0.17 3.6E-06 46.6 4.7 62 139-210 40-104 (219)
94 COG2179 Predicted hydrolase of 92.8 0.066 1.4E-06 47.6 2.0 98 135-261 21-119 (175)
95 PF09419 PGP_phosphatase: Mito 92.7 0.18 4E-06 44.5 4.7 95 138-262 37-146 (168)
96 TIGR02461 osmo_MPG_phos mannos 92.6 0.23 5E-06 45.1 5.4 52 145-220 2-54 (225)
97 PRK10530 pyridoxal phosphate ( 92.5 0.36 7.9E-06 43.8 6.7 15 142-156 3-17 (272)
98 PRK10513 sugar phosphate phosp 92.5 0.25 5.5E-06 45.0 5.6 57 142-221 3-60 (270)
99 TIGR01493 HAD-SF-IA-v2 Haloaci 91.9 0.028 6E-07 47.8 -1.4 75 181-262 89-166 (175)
100 PF11019 DUF2608: Protein of u 91.8 0.18 3.9E-06 47.1 3.7 123 141-264 19-190 (252)
101 PRK10444 UMP phosphatase; Prov 91.7 0.43 9.3E-06 44.2 6.1 54 143-220 2-56 (248)
102 PRK01158 phosphoglycolate phos 91.6 0.49 1.1E-05 41.9 6.2 57 143-222 4-61 (230)
103 TIGR00099 Cof-subfamily Cof su 91.5 0.38 8.2E-06 43.7 5.5 54 145-221 2-56 (256)
104 TIGR01484 HAD-SF-IIB HAD-super 91.5 0.29 6.3E-06 42.7 4.6 54 144-219 1-55 (204)
105 TIGR01489 DKMTPPase-SF 2,3-dik 91.5 0.32 6.9E-06 41.3 4.7 49 181-230 71-120 (188)
106 PRK06698 bifunctional 5'-methy 91.5 0.19 4.1E-06 50.2 3.8 79 181-262 329-410 (459)
107 PLN02919 haloacid dehalogenase 91.4 0.22 4.8E-06 55.2 4.5 81 183-263 162-246 (1057)
108 TIGR02463 MPGP_rel mannosyl-3- 91.1 0.32 7E-06 43.1 4.5 53 145-220 2-55 (221)
109 PRK15126 thiamin pyrimidine py 90.9 0.51 1.1E-05 43.3 5.8 14 143-156 3-16 (272)
110 PRK10976 putative hydrolase; P 90.7 0.56 1.2E-05 42.7 5.9 14 143-156 3-16 (266)
111 TIGR01456 CECR5 HAD-superfamil 90.6 0.45 9.7E-06 45.5 5.3 52 143-218 1-61 (321)
112 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.6 0.51 1.1E-05 43.7 5.5 56 143-218 2-58 (257)
113 TIGR01486 HAD-SF-IIB-MPGP mann 90.2 0.51 1.1E-05 43.1 5.1 53 145-220 2-55 (256)
114 PLN02645 phosphoglycolate phos 89.9 0.69 1.5E-05 44.0 5.9 55 141-219 27-82 (311)
115 smart00775 LNS2 LNS2 domain. T 89.9 0.54 1.2E-05 40.6 4.7 62 145-218 2-67 (157)
116 PRK10187 trehalose-6-phosphate 89.5 0.64 1.4E-05 43.3 5.3 60 141-218 13-74 (266)
117 TIGR01452 PGP_euk phosphoglyco 89.4 0.8 1.7E-05 42.6 5.9 52 143-218 3-55 (279)
118 TIGR02726 phenyl_P_delta pheny 89.4 0.77 1.7E-05 40.3 5.4 103 142-263 7-109 (169)
119 TIGR01482 SPP-subfamily Sucros 89.1 0.84 1.8E-05 40.2 5.5 52 145-219 1-53 (225)
120 COG4359 Uncharacterized conser 88.5 1.1 2.4E-05 40.7 5.8 42 181-222 72-114 (220)
121 PTZ00174 phosphomannomutase; P 87.5 0.96 2.1E-05 41.3 5.0 16 142-157 5-20 (247)
122 PLN02423 phosphomannomutase 87.3 1.3 2.8E-05 40.8 5.7 55 140-220 5-59 (245)
123 TIGR02137 HSK-PSP phosphoserin 87.0 0.78 1.7E-05 41.2 4.0 50 181-231 67-116 (203)
124 TIGR01490 HAD-SF-IB-hyp1 HAD-s 86.2 0.99 2.2E-05 39.1 4.1 49 181-230 86-135 (202)
125 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.2 1.8 3.9E-05 39.7 6.1 41 143-207 2-43 (249)
126 COG2503 Predicted secreted aci 85.9 0.71 1.5E-05 43.5 3.1 75 139-219 76-161 (274)
127 TIGR01488 HAD-SF-IB Haloacid D 85.3 1.3 2.9E-05 37.2 4.4 49 181-230 72-121 (177)
128 COG0647 NagD Predicted sugar p 84.4 2.2 4.7E-05 40.5 5.8 55 141-219 7-62 (269)
129 COG3882 FkbH Predicted enzyme 84.2 0.86 1.9E-05 46.7 3.1 116 139-264 219-339 (574)
130 PRK12702 mannosyl-3-phosphogly 84.2 2.3 5.1E-05 41.0 5.9 56 143-221 2-58 (302)
131 PRK14502 bifunctional mannosyl 84.1 3.3 7.1E-05 44.2 7.4 60 139-221 413-473 (694)
132 TIGR01460 HAD-SF-IIA Haloacid 83.7 1.9 4E-05 39.3 4.9 48 145-216 1-53 (236)
133 TIGR01485 SPP_plant-cyano sucr 83.4 1.7 3.7E-05 39.5 4.5 58 142-219 1-59 (249)
134 PRK10748 flavin mononucleotide 83.1 1.2 2.6E-05 40.4 3.3 76 181-262 112-190 (238)
135 COG0546 Gph Predicted phosphat 82.2 2.2 4.8E-05 38.2 4.7 81 181-262 88-172 (220)
136 PLN03017 trehalose-phosphatase 81.2 1.9 4.2E-05 42.6 4.2 59 140-216 109-167 (366)
137 PLN02887 hydrolase family prot 80.3 3.2 6.9E-05 43.4 5.6 58 140-220 306-364 (580)
138 TIGR01675 plant-AP plant acid 80.1 1.5 3.2E-05 40.7 2.8 89 140-232 75-172 (229)
139 PLN02954 phosphoserine phospha 80.0 3.9 8.4E-05 36.1 5.4 49 181-229 83-133 (224)
140 COG1877 OtsB Trehalose-6-phosp 79.8 3 6.6E-05 39.5 4.9 60 139-216 15-76 (266)
141 TIGR00685 T6PP trehalose-phosp 79.7 1.6 3.4E-05 39.8 2.9 48 141-206 2-51 (244)
142 PRK11133 serB phosphoserine ph 79.3 2.6 5.7E-05 40.7 4.4 82 181-263 180-275 (322)
143 PRK11587 putative phosphatase; 78.2 1.2 2.5E-05 39.6 1.5 16 142-157 3-18 (218)
144 PLN02151 trehalose-phosphatase 78.1 3 6.6E-05 41.1 4.5 59 140-216 96-154 (354)
145 PRK10725 fructose-1-P/6-phosph 78.0 1.2 2.7E-05 38.0 1.5 16 142-157 5-20 (188)
146 PHA02597 30.2 hypothetical pro 77.9 1.3 2.8E-05 38.5 1.7 15 143-157 3-17 (197)
147 PRK11590 hypothetical protein; 76.3 1.4 3.1E-05 39.2 1.5 39 181-219 94-134 (211)
148 TIGR01548 HAD-SF-IA-hyp1 haloa 75.0 1.6 3.5E-05 38.0 1.5 14 144-157 2-15 (197)
149 PRK13288 pyrophosphatase PpaX; 75.0 1.6 3.5E-05 38.4 1.5 16 142-157 3-18 (214)
150 PLN02580 trehalose-phosphatase 74.9 4.3 9.3E-05 40.5 4.5 61 139-217 116-176 (384)
151 TIGR01993 Pyr-5-nucltdase pyri 73.1 1.8 3.8E-05 37.2 1.3 14 144-157 2-15 (184)
152 TIGR02253 CTE7 HAD superfamily 73.0 1.8 4E-05 37.9 1.3 15 143-157 3-17 (221)
153 TIGR01511 ATPase-IB1_Cu copper 72.7 6.8 0.00015 40.5 5.6 92 141-263 384-477 (562)
154 TIGR03351 PhnX-like phosphonat 72.6 2.1 4.5E-05 37.7 1.6 15 143-157 2-16 (220)
155 TIGR02252 DREG-2 REG-2-like, H 71.8 2.4 5.2E-05 36.8 1.8 15 143-157 1-15 (203)
156 PRK13226 phosphoglycolate phos 71.1 2.1 4.5E-05 38.5 1.2 15 143-157 13-27 (229)
157 TIGR02009 PGMB-YQAB-SF beta-ph 70.8 2.1 4.6E-05 36.2 1.2 16 143-158 2-17 (185)
158 COG0560 SerB Phosphoserine pho 70.6 7.1 0.00015 35.4 4.6 83 181-264 76-172 (212)
159 TIGR02244 HAD-IG-Ncltidse HAD 69.9 4.7 0.0001 39.6 3.5 53 178-230 180-240 (343)
160 TIGR01422 phosphonatase phosph 69.9 2.7 5.8E-05 38.1 1.7 15 143-157 3-17 (253)
161 COG0546 Gph Predicted phosphat 69.8 2.7 5.8E-05 37.6 1.7 18 141-158 3-20 (220)
162 PRK13223 phosphoglycolate phos 69.8 2.7 5.9E-05 39.1 1.8 16 142-157 13-28 (272)
163 PLN02770 haloacid dehalogenase 69.5 2.6 5.6E-05 38.5 1.5 18 140-157 20-37 (248)
164 PLN03243 haloacid dehalogenase 69.5 2.9 6.3E-05 38.9 1.9 19 139-157 21-39 (260)
165 PRK13225 phosphoglycolate phos 68.7 2.3 4.9E-05 40.0 1.0 17 141-157 61-77 (273)
166 PRK13478 phosphonoacetaldehyde 68.4 2.7 5.9E-05 38.6 1.4 16 142-157 4-19 (267)
167 TIGR01549 HAD-SF-IA-v1 haloaci 68.4 2.2 4.7E-05 35.3 0.7 14 144-157 1-14 (154)
168 PRK10748 flavin mononucleotide 67.2 2.9 6.3E-05 37.8 1.4 16 142-157 10-25 (238)
169 KOG2914 Predicted haloacid-hal 67.1 4.8 0.0001 37.2 2.8 86 179-264 89-181 (222)
170 PF00702 Hydrolase: haloacid d 66.6 4.4 9.5E-05 34.8 2.3 80 179-262 124-205 (215)
171 PRK11590 hypothetical protein; 66.4 7.1 0.00015 34.7 3.7 16 141-156 5-20 (211)
172 TIGR00338 serB phosphoserine p 65.7 3.5 7.6E-05 36.2 1.6 17 141-157 13-29 (219)
173 PRK09449 dUMP phosphatase; Pro 65.6 3 6.6E-05 36.8 1.1 13 143-155 4-16 (224)
174 TIGR02254 YjjG/YfnB HAD superf 65.2 3.3 7.2E-05 36.1 1.3 16 143-158 2-17 (224)
175 PF13419 HAD_2: Haloacid dehal 64.9 3.2 7E-05 33.9 1.1 14 145-158 1-14 (176)
176 TIGR01990 bPGM beta-phosphoglu 64.8 2.9 6.3E-05 35.4 0.8 15 144-158 1-15 (185)
177 PRK10826 2-deoxyglucose-6-phos 64.7 3.9 8.4E-05 36.2 1.7 17 141-157 6-22 (222)
178 TIGR02247 HAD-1A3-hyp Epoxide 64.5 3.8 8.3E-05 35.8 1.6 15 143-157 3-17 (211)
179 PLN02779 haloacid dehalogenase 64.4 4.2 9.1E-05 38.2 1.9 18 140-157 38-55 (286)
180 TIGR01428 HAD_type_II 2-haloal 64.4 3.4 7.3E-05 35.8 1.2 15 143-157 2-16 (198)
181 PRK13222 phosphoglycolate phos 64.3 3.5 7.5E-05 36.1 1.3 16 142-157 6-21 (226)
182 TIGR01454 AHBA_synth_RP 3-amin 63.8 2.7 5.7E-05 36.7 0.4 13 145-157 1-13 (205)
183 TIGR01491 HAD-SF-IB-PSPlk HAD- 63.4 3.9 8.4E-05 35.0 1.4 16 142-157 4-19 (201)
184 TIGR01545 YfhB_g-proteo haloac 62.8 15 0.00032 33.0 5.1 36 182-217 94-131 (210)
185 TIGR01449 PGP_bact 2-phosphogl 62.6 2.9 6.3E-05 36.3 0.4 13 145-157 1-13 (213)
186 PRK14501 putative bifunctional 62.1 8.7 0.00019 40.9 3.9 62 139-218 489-552 (726)
187 TIGR01509 HAD-SF-IA-v3 haloaci 61.9 3.8 8.2E-05 34.4 1.0 15 144-158 1-15 (183)
188 TIGR01493 HAD-SF-IA-v2 Haloaci 61.4 3.9 8.5E-05 34.5 1.0 13 145-157 2-14 (175)
189 PF06941 NT5C: 5' nucleotidase 60.4 9.7 0.00021 33.3 3.4 29 181-209 72-101 (191)
190 PF05116 S6PP: Sucrose-6F-phos 60.1 8.7 0.00019 35.4 3.1 53 141-217 1-55 (247)
191 PRK10563 6-phosphogluconate ph 59.9 4.9 0.00011 35.4 1.4 16 142-157 4-19 (221)
192 TIGR01489 DKMTPPase-SF 2,3-dik 59.8 5.2 0.00011 33.8 1.5 16 142-157 1-16 (188)
193 PLN02954 phosphoserine phospha 58.2 5.8 0.00013 35.0 1.6 17 141-157 11-27 (224)
194 PF03767 Acid_phosphat_B: HAD 57.7 5.3 0.00011 36.6 1.3 77 140-222 70-156 (229)
195 TIGR02471 sucr_syn_bact_C sucr 54.7 13 0.00029 33.2 3.3 12 145-156 2-13 (236)
196 PF12710 HAD: haloacid dehalog 53.2 15 0.00033 31.0 3.3 47 183-229 86-138 (192)
197 TIGR01680 Veg_Stor_Prot vegeta 52.8 12 0.00025 35.8 2.7 78 141-222 100-186 (275)
198 PRK11133 serB phosphoserine ph 52.1 9.6 0.00021 36.8 2.1 18 139-156 107-124 (322)
199 PRK06698 bifunctional 5'-methy 51.1 6.7 0.00014 39.3 0.9 17 142-158 241-257 (459)
200 COG4502 5'(3')-deoxyribonucleo 51.1 13 0.00029 32.6 2.6 31 181-211 67-97 (180)
201 COG0637 Predicted phosphatase/ 51.0 8.6 0.00019 34.7 1.5 15 143-157 3-17 (221)
202 TIGR01525 ATPase-IB_hvy heavy 48.2 27 0.00059 35.9 4.8 75 180-263 382-458 (556)
203 PLN02575 haloacid dehalogenase 46.6 12 0.00027 37.1 2.0 19 139-157 128-146 (381)
204 COG1011 Predicted hydrolase (H 46.5 11 0.00025 32.8 1.5 16 142-157 4-19 (229)
205 PRK09552 mtnX 2-hydroxy-3-keto 46.0 12 0.00026 33.3 1.6 16 142-157 3-18 (219)
206 COG0560 SerB Phosphoserine pho 45.8 11 0.00024 34.1 1.4 16 140-155 3-18 (212)
207 PLN02382 probable sucrose-phos 45.7 12 0.00026 37.4 1.7 18 139-156 6-23 (413)
208 PRK09456 ?-D-glucose-1-phospha 44.6 12 0.00026 32.7 1.3 14 144-157 2-15 (199)
209 PLN02940 riboflavin kinase 44.6 11 0.00024 37.1 1.2 16 142-157 11-26 (382)
210 TIGR02137 HSK-PSP phosphoserin 44.5 11 0.00024 33.7 1.2 15 144-158 3-17 (203)
211 PF06888 Put_Phosphatase: Puta 43.9 45 0.00097 31.0 5.1 42 180-221 69-113 (234)
212 COG3769 Predicted hydrolase (H 43.8 54 0.0012 30.9 5.5 58 142-223 7-65 (274)
213 TIGR01512 ATPase-IB2_Cd heavy 43.2 15 0.00033 37.7 2.0 76 179-263 359-436 (536)
214 PF08235 LNS2: LNS2 (Lipin/Ned 41.3 50 0.0011 29.0 4.7 62 145-218 2-64 (157)
215 TIGR01545 YfhB_g-proteo haloac 41.0 15 0.00032 33.1 1.4 17 141-157 4-20 (210)
216 cd02514 GT13_GLCNAC-TI GT13_GL 40.4 31 0.00067 33.7 3.6 40 179-218 6-52 (334)
217 PF05822 UMPH-1: Pyrimidine 5' 37.7 32 0.00069 32.4 3.1 88 180-267 88-194 (246)
218 PF02358 Trehalose_PPase: Treh 37.7 29 0.00062 31.3 2.7 51 146-214 1-53 (235)
219 PLN03063 alpha,alpha-trehalose 35.7 48 0.001 36.0 4.5 64 139-217 504-569 (797)
220 PLN03064 alpha,alpha-trehalose 35.0 62 0.0013 36.1 5.2 71 139-218 588-660 (934)
221 cd06539 CIDE_N_A CIDE_N domain 33.9 79 0.0017 24.7 4.2 15 142-156 40-54 (78)
222 cd06537 CIDE_N_B CIDE_N domain 33.8 78 0.0017 25.0 4.2 15 142-156 39-53 (81)
223 PLN02205 alpha,alpha-trehalose 32.6 36 0.00077 37.4 2.9 59 140-218 594-654 (854)
224 PLN02919 haloacid dehalogenase 29.6 36 0.00078 38.2 2.4 18 140-157 73-90 (1057)
225 cd06538 CIDE_N_FSP27 CIDE_N do 28.9 92 0.002 24.4 3.8 15 142-156 39-53 (79)
226 cd01615 CIDE_N CIDE_N domain, 28.5 1E+02 0.0022 24.0 4.1 16 141-156 39-54 (78)
227 smart00266 CAD Domains present 28.5 1E+02 0.0023 23.8 4.1 15 142-156 38-52 (74)
228 PF13701 DDE_Tnp_1_4: Transpos 28.1 1.8E+02 0.004 29.4 6.9 83 141-223 138-242 (448)
229 cd06536 CIDE_N_ICAD CIDE_N dom 28.1 1E+02 0.0023 24.2 4.0 16 141-156 41-56 (80)
230 KOG2134 Polynucleotide kinase 25.9 1.1E+02 0.0023 31.0 4.6 58 140-207 73-130 (422)
231 PF05761 5_nucleotid: 5' nucle 25.4 1.1E+02 0.0024 31.2 4.8 53 178-230 179-240 (448)
232 PLN02177 glycerol-3-phosphate 25.4 52 0.0011 33.9 2.5 23 199-221 124-147 (497)
233 PF06941 NT5C: 5' nucleotidase 22.7 46 0.001 29.0 1.4 16 142-157 2-17 (191)
234 PF02017 CIDE-N: CIDE-N domain 22.5 55 0.0012 25.5 1.6 16 141-156 39-54 (78)
235 PHA03050 glutaredoxin; Provisi 21.5 1.1E+02 0.0024 24.7 3.3 35 188-222 3-37 (108)
236 KOG4549 Magnesium-dependent ph 21.3 4.3E+02 0.0092 22.9 6.8 120 141-262 4-132 (144)
237 TIGR01658 EYA-cons_domain eyes 20.0 45 0.00098 31.8 0.8 11 144-154 4-14 (274)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.1e-43 Score=329.26 Aligned_cols=161 Identities=43% Similarity=0.727 Sum_probs=152.6
Q ss_pred CCCCCCCCCCCcEEEEeCCcceeeee--ccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460 132 TPLREPIAGLPITLVLDLDETLVHSS--FDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI 209 (297)
Q Consensus 132 llP~~~~~~~k~tLVLDLDeTLVhs~--~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~ 209 (297)
++|......+|+||||||||||||++ ..+...++|.+++.+++..+.+||.+|||+++||+.++++||++||||+.+.
T Consensus 79 ~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~ 158 (262)
T KOG1605|consen 79 VLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEV 158 (262)
T ss_pred cCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHH
Confidence 44555557899999999999999999 6777789999999999889999999999999999999999999999999999
Q ss_pred cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460 210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY 281 (297)
Q Consensus 210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~ 281 (297)
||.+|++.|||.+++|.+|+||++|...+|.|+|||+.+|+|+++||||||+|.+|.+| +|++|+.|+||++
T Consensus 159 Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~ 238 (262)
T KOG1605|consen 159 YADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLK 238 (262)
T ss_pred HHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHH
Confidence 99999999999888999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhh
Q 022460 282 LSFYINASLDI 292 (297)
Q Consensus 282 L~p~L~~La~v 292 (297)
|+|||++|+.+
T Consensus 239 LlpfLe~L~~~ 249 (262)
T KOG1605|consen 239 LLPFLEALAFV 249 (262)
T ss_pred HHHHHHHhccc
Confidence 99999999854
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=9.3e-40 Score=282.87 Aligned_cols=152 Identities=43% Similarity=0.717 Sum_probs=143.3
Q ss_pred CcEEEEeCCcceeeeeccCCC-CCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcC
Q 022460 142 PITLVLDLDETLVHSSFDNCK-DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~-~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP 220 (297)
|+||||||||||||++..+.. ..++.+++..++...++||++|||+++||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 679999999999999888765 6788888887777889999999999999999999999999999999999999999999
Q ss_pred CCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHHHHHHHHHHHhh
Q 022460 221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIYLSFYINASLDI 292 (297)
Q Consensus 221 ~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~L~p~L~~La~v 292 (297)
.+.+|++++||++|...+|.+.|||+.+|++++++|||||+|..|..| +|.|+.+|++|++|+|||+.|+..
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 988999999999999999999999999999999999999999999876 999999999999999999999986
Q ss_pred h
Q 022460 293 L 293 (297)
Q Consensus 293 ~ 293 (297)
.
T Consensus 161 ~ 161 (162)
T TIGR02251 161 D 161 (162)
T ss_pred C
Confidence 4
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.6e-36 Score=258.35 Aligned_cols=147 Identities=39% Similarity=0.646 Sum_probs=121.1
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~ 222 (297)
|||||||||||||+...+..+.++... . ....++|++|||+++||++++++|||+|||++++.||++|++.|||++
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998876554444322 2 456789999999999999999999999999999999999999999988
Q ss_pred ceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCC-CCChhHHHHHHHHHHHHhhh
Q 022460 223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINY-PPDILIIYLSFYINASLDIL 293 (297)
Q Consensus 223 ~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d-~~D~eLl~L~p~L~~La~v~ 293 (297)
.+|++++||++|....|.++|||+++|+++++||||||+|.+|..| +|.++ ++|++|++|++||+.|+...
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 8999999999999999988999999999999999999999999876 99999 99999999999999999764
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.98 E-value=2.3e-32 Score=244.45 Aligned_cols=141 Identities=21% Similarity=0.244 Sum_probs=118.0
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhh
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~L 218 (297)
..+|+||||||||||||+.... ...++.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~----------------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPA----------------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEcccccC----------------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence 4678999999999999974211 134688999999999999999999999999999999999999
Q ss_pred cCCC-ceeeeEEeccCeee------eCCc-eeeeccccC------CCCCcEEEEECCCcccccC--------CCCC----
Q 022460 219 DPNQ-TLIGQRVYRDSCVF------ADGE-YLKDLTILG------RDLARIAIVDNTPQVYLFL--------SYIN---- 272 (297)
Q Consensus 219 DP~~-~~f~~rL~Rd~C~~------~~g~-~iKDLs~Lg------rdl~~vVIIDDsp~~~~~q--------~w~~---- 272 (297)
++.+ ..+..++++++|.+ ..|. ++|||+.++ +++++||||||+|.+|.+| +|++
T Consensus 82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~ 161 (195)
T TIGR02245 82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN 161 (195)
T ss_pred cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence 7643 23566777888842 3555 499999883 3889999999999999998 8985
Q ss_pred CCCChhHHHHHHHHHHHHhhhcc
Q 022460 273 YPPDILIIYLSFYINASLDILYS 295 (297)
Q Consensus 273 d~~D~eLl~L~p~L~~La~v~s~ 295 (297)
+++|+||++|+|||+.||+++.+
T Consensus 162 ~~~D~eL~~L~~yL~~la~~~Dv 184 (195)
T TIGR02245 162 RGTDQELLKLTQYLKTIAELEDF 184 (195)
T ss_pred CcccHHHHHHHHHHHHHhcCccc
Confidence 57999999999999999987653
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=2.3e-31 Score=253.77 Aligned_cols=151 Identities=26% Similarity=0.463 Sum_probs=137.7
Q ss_pred CCCCCCCCCCCC---CCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEE
Q 022460 125 APSYWPRTPLRE---PIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201 (297)
Q Consensus 125 ~~~~~p~llP~~---~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv 201 (297)
.++.++.|+|++ +..++++||||+|.++|||..+ ++ ..+|.+++|||++.||..++++||||
T Consensus 169 ~EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdw--------s~-------~tGwRf~kRPgvD~FL~~~a~~yEIV 233 (393)
T KOG2832|consen 169 KEPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDW--------SY-------KTGWRFKKRPGVDYFLGHLAKYYEIV 233 (393)
T ss_pred cCCchhhhCCCCCCCcccCCCceEEEEeeeeEeccch--------hh-------hcCceeccCchHHHHHHhhcccceEE
Confidence 456667777763 2359999999999999999754 32 35789999999999999999999999
Q ss_pred EEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCC
Q 022460 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINY 273 (297)
Q Consensus 202 IfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d 273 (297)
|||+.+..||.+|++.|||+| +|+++|||++|.+.+|+++|||++|+||+++||+||-.+..+.+| +|.|+
T Consensus 234 i~sse~gmt~~pl~d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn 312 (393)
T KOG2832|consen 234 VYSSEQGMTVFPLLDALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGN 312 (393)
T ss_pred EEecCCccchhhhHhhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCC
Confidence 999999999999999999997 899999999999999999999999999999999999999999998 89999
Q ss_pred CCChhHHHHHHHHHHHHh
Q 022460 274 PPDILIIYLSFYINASLD 291 (297)
Q Consensus 274 ~~D~eLl~L~p~L~~La~ 291 (297)
.+|+.|++|++||+.||.
T Consensus 313 ~dDt~L~dL~~FL~~ia~ 330 (393)
T KOG2832|consen 313 DDDTSLFDLLAFLEYIAQ 330 (393)
T ss_pred cccchhhhHHHHHHHHHH
Confidence 999999999999999875
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.96 E-value=4.1e-30 Score=222.15 Aligned_cols=127 Identities=25% Similarity=0.469 Sum_probs=106.2
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCcee------------eeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCC
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSF------------PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG 206 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~------------~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas 206 (297)
..+|++||||||||||||+..+........ ...+.......++++|||+++||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 468999999999999999886543221110 01122224678999999999999999999999999999
Q ss_pred ccccHHHHHHhhcCCCceeeeEE-eccCeeeeCCceeeecc-ccCCCCCcEEEEECCCcccccC
Q 022460 207 QSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVYLFL 268 (297)
Q Consensus 207 ~~~YA~~Il~~LDP~~~~f~~rL-~Rd~C~~~~g~~iKDLs-~Lgrdl~~vVIIDDsp~~~~~q 268 (297)
.+.||++|++.|||.+.+|++|+ +|++|. |.++|||+ .+|+++++||||||+|.+|..|
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~ 143 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWH 143 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcC
Confidence 99999999999999998997775 599995 88999995 5599999999999999999988
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.93 E-value=8.3e-27 Score=226.48 Aligned_cols=160 Identities=36% Similarity=0.563 Sum_probs=147.9
Q ss_pred CCCCCCC-CCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460 131 RTPLREP-IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI 209 (297)
Q Consensus 131 ~llP~~~-~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~ 209 (297)
.++|+.. ...++++|++|||+||+|+........+|...+...+..+.+||.+||++++||..++++|++++||++.+.
T Consensus 200 ~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~ 279 (390)
T COG5190 200 TLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR 279 (390)
T ss_pred cccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence 4444433 458899999999999999998888888888777777778899999999999999999999999999999999
Q ss_pred cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460 210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY 281 (297)
Q Consensus 210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~ 281 (297)
||++|++.||+.+ .|++|+||.+|....|.|+|||+.+||++.+|||||++|.+|.++ +|.+++.|.+|+.
T Consensus 280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ 358 (390)
T COG5190 280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN 358 (390)
T ss_pred hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence 9999999999997 899999999999999999999999999999999999999999887 9999999999999
Q ss_pred HHHHHHHHHh
Q 022460 282 LSFYINASLD 291 (297)
Q Consensus 282 L~p~L~~La~ 291 (297)
|+++|+.|.+
T Consensus 359 ll~~le~L~~ 368 (390)
T COG5190 359 LLPFLEDLPD 368 (390)
T ss_pred hccccccccc
Confidence 9999998876
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.92 E-value=2.8e-24 Score=182.74 Aligned_cols=137 Identities=42% Similarity=0.782 Sum_probs=119.6
Q ss_pred CCcEEEEeCCcceeeeeccC---CCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHh
Q 022460 141 LPITLVLDLDETLVHSSFDN---CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~---~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~ 217 (297)
+|++|||||||||||++... .....+...+.+.+....++++.|||+++||+++.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 58899999999999996422 223344555566677888999999999999999999999999999999999999999
Q ss_pred hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCCh
Q 022460 218 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDI 277 (297)
Q Consensus 218 LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~ 277 (297)
+++.+.+|...+++++|...+..|.|+|+++|++++++|+|||++..|..+ +|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 999766678999999999877779999999999999999999999988876 899998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.77 E-value=9.9e-19 Score=178.53 Aligned_cols=126 Identities=27% Similarity=0.440 Sum_probs=97.7
Q ss_pred CCCcEEEEeCCcceeeeeccCCC---------CCC------ceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEc
Q 022460 140 GLPITLVLDLDETLVHSSFDNCK---------DAD------FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~---------~~d------~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfT 204 (297)
++++.||+|||.||+|+...+.- ... -.+.+...+....+|||+|||+++||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 45579999999999999764321 000 001111113345689999999999999999999999999
Q ss_pred CCccccHHHHHHhhcCCCceeeeEEe-ccCeeeeCCceeeecccc-CCCCCcEEEEECCCcccccC
Q 022460 205 AGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVYLFL 268 (297)
Q Consensus 205 as~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~~~q 268 (297)
.|.+.||..|++.|||+|+||++|++ |+. ..+.-.+||..+ .++.+.||||||+..+|..+
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~ 286 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDH 286 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCC
Confidence 99999999999999999999999988 665 122335666666 67778899999999999876
No 10
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.65 E-value=1.8e-08 Score=98.90 Aligned_cols=125 Identities=26% Similarity=0.459 Sum_probs=99.0
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCC----------ceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCcc
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDAD----------FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQS 208 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d----------~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~ 208 (297)
+.++..||.|+|.|.+|+...+..+.. .-..-.+......++++.||++..|+...++.||+.+||.|.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 567889999999999999876621110 0000111123456899999999999999999999999999999
Q ss_pred ccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeecccc-CCCCCcEEEEECCCccc
Q 022460 209 IYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVY 265 (297)
Q Consensus 209 ~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~ 265 (297)
.||..+..++||.|++|..|....+- ..+.-.|-++++ ..+.+.++++||++..|
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~ 158 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNMVVIIDDRGDVW 158 (390)
T ss_pred cchhhhhhcccccccccccccccccc--cccchhhhhhhcCccccccccccccccccC
Confidence 99999999999999999988774432 234556888877 88999999999999999
No 11
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.41 E-value=4.4e-07 Score=77.34 Aligned_cols=122 Identities=15% Similarity=0.010 Sum_probs=85.3
Q ss_pred EEEEeCCccee-eeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460 144 TLVLDLDETLV-HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 144 tLVLDLDeTLV-hs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
.+|||+|+||+ |-......+|-.++.-..-....+.-|.+||++.+||+++.. -|-+..+|...+.-|-+++.+||-.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 57999999999 433333333322222111122346778999999999999986 5888899999999999999999998
Q ss_pred CceeeeEEeccCeeeeCCceeeecccc------CCCCCcEEEEECCCccccc
Q 022460 222 QTLIGQRVYRDSCVFADGEYLKDLTIL------GRDLARIAIVDNTPQVYLF 267 (297)
Q Consensus 222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~L------grdl~~vVIIDDsp~~~~~ 267 (297)
. +|++.+...|= +..-...|-|+.+ ...++++|.+||+...+..
T Consensus 82 ~-yFhy~ViePhP-~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~ 131 (164)
T COG4996 82 Q-YFHYIVIEPHP-YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGN 131 (164)
T ss_pred h-hEEEEEecCCC-hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHH
Confidence 5 89988887762 2122222333333 3467899999999877654
No 12
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.30 E-value=2.5e-07 Score=76.95 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=72.9
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC-ccccHHHHHHhhcC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG-QSIYAGQLLDILDP 220 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas-~~~YA~~Il~~LDP 220 (297)
+.+|+|||+||+..-..... .+-.. +. . ...||+.++|+++.+ .+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~-~~~~~----~~---~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVG-EDPII----DL---E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccccc-CCcch----hh---H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 36899999999975210000 00000 00 0 578999999999975 6999999999 89999999998762
Q ss_pred C------CceeeeEEeccCeeeeCCceeeeccccC--CCCCcEEEEECCCcc
Q 022460 221 N------QTLIGQRVYRDSCVFADGEYLKDLTILG--RDLARIAIVDNTPQV 264 (297)
Q Consensus 221 ~------~~~f~~rL~Rd~C~~~~g~~iKDLs~Lg--rdl~~vVIIDDsp~~ 264 (297)
. .++|......+.- .....+.+=+.++| ...+++++|||++..
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhH
Confidence 1 1244444433221 11123556666778 899999999999853
No 13
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.19 E-value=1.1e-06 Score=69.49 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=70.1
Q ss_pred EEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 222 (297)
Q Consensus 144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~ 222 (297)
++|||+||||+........ ...+..+|++.++|+.+.+. +.++|.|++.+.++..+++.+.-..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999976421100 12356899999999999986 9999999999999999999875432
Q ss_pred ceeeeEEeccCeeee----------------CC---ceeeeccccCCCCCcEEEEECCC
Q 022460 223 TLIGQRVYRDSCVFA----------------DG---EYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 223 ~~f~~rL~Rd~C~~~----------------~g---~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
++...+..+..... .. .+.+-+..++.+.+.++.|+|++
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~ 123 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL 123 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH
Confidence 34444443322211 11 12223334466688999999987
No 14
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.17 E-value=3.3e-06 Score=74.68 Aligned_cols=121 Identities=13% Similarity=0.050 Sum_probs=78.1
Q ss_pred cEEEEeCCcceee-eeccCCCCCCceee-ee-ecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC-ccccHHHHHHh
Q 022460 143 ITLVLDLDETLVH-SSFDNCKDADFSFP-IH-SKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG-QSIYAGQLLDI 217 (297)
Q Consensus 143 ~tLVLDLDeTLVh-s~~~~~~~~d~~~~-i~-~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas-~~~YA~~Il~~ 217 (297)
..+|+|||+||+. +..+-...+..... .. .-+.....-+..+||+.++|+.|.+ .+.+.|-|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 3789999999994 43322222211110 00 0011223457789999999999985 5999999988 89999999999
Q ss_pred hcCC--C------ceeeeEEeccCeeeeCCce----eeecccc---CCCCCcEEEEECCCccc
Q 022460 218 LDPN--Q------TLIGQRVYRDSCVFADGEY----LKDLTIL---GRDLARIAIVDNTPQVY 265 (297)
Q Consensus 218 LDP~--~------~~f~~rL~Rd~C~~~~g~~----iKDLs~L---grdl~~vVIIDDsp~~~ 265 (297)
++-. | .+|+..+.-+... .... .+.+... |-+.+++++|||++.-.
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~--~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPN--KAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCc--hHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 9854 2 4677777654321 1111 2222222 47789999999999543
No 15
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.92 E-value=2.1e-05 Score=75.09 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=59.6
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeC-ccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~R-P~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~ 217 (297)
..+..+|+||||||+-... -|..| |++.+.|+++.+. +.++|||++.+.+|..+++.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence 5667999999999997421 25689 9999999999986 89999999999999999999
Q ss_pred hcCCCceeeeEEeccC
Q 022460 218 LDPNQTLIGQRVYRDS 233 (297)
Q Consensus 218 LDP~~~~f~~rL~Rd~ 233 (297)
++-.+ +|+..+..++
T Consensus 183 lGLd~-YFdvIIs~Gd 197 (301)
T TIGR01684 183 VKLDR-YFDIIISGGH 197 (301)
T ss_pred cCCCc-ccCEEEECCc
Confidence 98875 6765555333
No 16
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.88 E-value=2.2e-05 Score=64.50 Aligned_cols=101 Identities=23% Similarity=0.139 Sum_probs=68.6
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc--------cccHHH
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ--------SIYAGQ 213 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~--------~~YA~~ 213 (297)
+.|+||+||||++.... . ... ......|++.++|+++.+ .+.++|-|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~--~-----------~~~--~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--V-----------DDE--DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--C-----------CCH--HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 36899999999963110 0 000 124578999999999975 49999999998 778888
Q ss_pred HHHhhcCCCceeeeEEeccCe-eeeCCceeeecccc-CCCCCcEEEEECC
Q 022460 214 LLDILDPNQTLIGQRVYRDSC-VFADGEYLKDLTIL-GRDLARIAIVDNT 261 (297)
Q Consensus 214 Il~~LDP~~~~f~~rL~Rd~C-~~~~g~~iKDLs~L-grdl~~vVIIDDs 261 (297)
+++.+.-. +...++...+ ......+.+-++.+ +.+.+++++|+|+
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~ 112 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQ 112 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCC
Confidence 88888653 2222232211 11223455666777 5899999999994
No 17
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.86 E-value=1.4e-05 Score=76.20 Aligned_cols=108 Identities=15% Similarity=0.082 Sum_probs=72.4
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHh--
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI-- 217 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~-- 217 (297)
.+++||+|||+||+....-. .+...-......|++.++|+.+.+ -+.+.|-|...+..|..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e------------~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGE------------DGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEcc------------CCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 46799999999999754211 010000112247899999999986 589999999999999999987
Q ss_pred --hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460 218 --LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 218 --LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~ 263 (297)
+.... +|...... .......+.+-+..+|-+++.+|+|||++.
T Consensus 70 ~~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~ 114 (320)
T TIGR01686 70 DFILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPA 114 (320)
T ss_pred cccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHH
Confidence 54332 45433221 111112344555667999999999999873
No 18
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.82 E-value=4.2e-05 Score=73.09 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=60.4
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeC-ccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~R-P~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~ 217 (297)
..++.+|+||||||+.... -|..| |++.+.|+++.+. +.++|+|++.+.+|..+++.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence 6678999999999998522 25689 9999999999975 89999999999999999999
Q ss_pred hcCCCceeeeEEeccCe
Q 022460 218 LDPNQTLIGQRVYRDSC 234 (297)
Q Consensus 218 LDP~~~~f~~rL~Rd~C 234 (297)
+.-.+ +|...+..++.
T Consensus 185 lgL~~-yFDvII~~g~i 200 (303)
T PHA03398 185 TKLEG-YFDIIICGGRK 200 (303)
T ss_pred cCCCc-cccEEEECCCc
Confidence 98864 67655554443
No 19
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.59 E-value=2.2e-05 Score=71.03 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=65.0
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.++|+.+.+ .+.+.|-|++.+.++...++.+.-. .+|+..+..+.....+ ..|.+-+.++|-++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999987 4899999999999999999887654 3688777655433222 135666778899999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 171 ~igDs~~ 177 (224)
T PRK14988 171 FIDDSEP 177 (224)
T ss_pred EEcCCHH
Confidence 9999984
No 20
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.57 E-value=8.8e-05 Score=65.48 Aligned_cols=119 Identities=15% Similarity=0.182 Sum_probs=64.2
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeee--cCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcC-CccccHHHHHHh
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHS--KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTA-GQSIYAGQLLDI 217 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~--~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTa-s~~~YA~~Il~~ 217 (297)
++.+|+|||.||+.......-.+-|+-.-.- -....+--+++-|++...|+++.. ..+|.+-|. ..+..|.++|+.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~ 82 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL 82 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence 4689999999999765433322222211000 001245568899999999999996 689999994 578999999999
Q ss_pred hcCC---------CceeeeEEeccCeeeeCCceeeecc-ccCCCCCcEEEEECCCc
Q 022460 218 LDPN---------QTLIGQRVYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 218 LDP~---------~~~f~~rL~Rd~C~~~~g~~iKDLs-~Lgrdl~~vVIIDDsp~ 263 (297)
|.-. ..+|++.=.-.++ +..+++.|. ..|.+.+.+++.||...
T Consensus 83 l~i~~~~~~~~~~~~~F~~~eI~~gs---K~~Hf~~i~~~tgI~y~eMlFFDDe~~ 135 (169)
T PF12689_consen 83 LEIDDADGDGVPLIEYFDYLEIYPGS---KTTHFRRIHRKTGIPYEEMLFFDDESR 135 (169)
T ss_dssp TT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HH
T ss_pred cCCCccccccccchhhcchhheecCc---hHHHHHHHHHhcCCChhHEEEecCchh
Confidence 9776 1244432111111 223455554 45889999999999863
No 21
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.54 E-value=0.00019 Score=60.65 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=66.1
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcc-------------
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS------------- 208 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~------------- 208 (297)
++|+||+||||+........ .. . .-+...||+.++|+.|.+ .|.++|-|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-~~----------~--~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-RS----------L--DDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-CC----------H--HHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 47899999999986431100 00 0 113578999999999975 599999999874
Q ss_pred --ccHHHHHHhhcCCCceeeeEEec-----cC--ee-eeCCceeeeccccCCCCCcEEEEECCC
Q 022460 209 --IYAGQLLDILDPNQTLIGQRVYR-----DS--CV-FADGEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 209 --~YA~~Il~~LDP~~~~f~~rL~R-----d~--C~-~~~g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
.++..+++.+.-. +...++. +. +. .....+.+=+..+|-+++++++|.|++
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~ 128 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL 128 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCH
Confidence 4566666666443 2222222 11 11 111234455566788999999999985
No 22
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.49 E-value=0.00017 Score=62.63 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=65.4
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc----ccHH-----
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS----IYAG----- 212 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~----~YA~----- 212 (297)
+.|.||+||||+-.. ++... .--+..-||+.++|++|.+. |.++|.|++.. .|+.
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~~~--------~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYVHE--------IDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCCCC--------HHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998311 11100 01245679999999999865 99999999885 2333
Q ss_pred ------HHHHhhcCCCceeeeEEecc-----------Ceeee---CCceeeeccccCCCCCcEEEEECCCc
Q 022460 213 ------QLLDILDPNQTLIGQRVYRD-----------SCVFA---DGEYLKDLTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 213 ------~Il~~LDP~~~~f~~rL~Rd-----------~C~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp~ 263 (297)
.++..+... |...++.. .|... .+.|.+-++++|-+++++++|.|++.
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~ 134 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLE 134 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHH
Confidence 333332211 33333321 22221 22456667788999999999999974
No 23
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.47 E-value=0.00014 Score=63.25 Aligned_cols=104 Identities=16% Similarity=0.030 Sum_probs=67.2
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc------------
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS------------ 208 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~------------ 208 (297)
.+.|+||+||||+-... . |. .... .+...||+.++|+++.+. |.++|-|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~-~-----~~------~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G-----YV------KSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCc-c-----cc------CCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 46899999999975321 0 10 0011 245789999999999975 99999998863
Q ss_pred ---ccHHHHHHhhcCCCceeeeEEeccCe-----eee---CCceeeeccccCCCCCcEEEEECCC
Q 022460 209 ---IYAGQLLDILDPNQTLIGQRVYRDSC-----VFA---DGEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 209 ---~YA~~Il~~LDP~~~~f~~rL~Rd~C-----~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
.+...+++.+ |-.|...++...+ ... ...|.+-+..+|.+++++++|.|++
T Consensus 69 ~~~~~~~~~l~~~---g~~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~ 130 (181)
T PRK08942 69 ALHEKMDWSLADR---GGRLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSL 130 (181)
T ss_pred HHHHHHHHHHHHc---CCccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCH
Confidence 2223334333 3235555554322 111 1245666777899999999999997
No 24
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.44 E-value=0.0003 Score=61.10 Aligned_cols=105 Identities=17% Similarity=0.088 Sum_probs=71.7
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC---------------
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG--------------- 206 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas--------------- 206 (297)
+.+.||.||||++.... .|. . ...-.++.-||+.++|++|.+ .|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~~--~-----~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DFQ--V-----DALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----ccc--c-----CCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 58999999999984210 111 0 111136778999999999987 5999999996
Q ss_pred ccccHHHHHHhhcCCCceeeeEEec-----cCeeeeCC---ceeeeccccCCCCCcEEEEECCC
Q 022460 207 QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 207 ~~~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~~g---~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
...++..+++.++-. |...++. +.+..... .+..-++.+|.+.+++++|.|+.
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~ 130 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRE 130 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 345777777777664 6666553 44433222 23344455688899999999986
No 25
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.33 E-value=0.00018 Score=67.02 Aligned_cols=114 Identities=13% Similarity=0.165 Sum_probs=79.9
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L 218 (297)
.++..+++|+||||....... +.+|. . ..-....|++.++|+.+.+. +.++|.|+.....+..+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~------~---~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT------K---VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh------h---cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 355799999999998653321 11221 0 01234699999999999865 899999999999999999999
Q ss_pred cCCCceeeeEEeccCe-------eeeCC---ceeeeccccCC-CCCcEEEEECCCcc
Q 022460 219 DPNQTLIGQRVYRDSC-------VFADG---EYLKDLTILGR-DLARIAIVDNTPQV 264 (297)
Q Consensus 219 DP~~~~f~~rL~Rd~C-------~~~~g---~~iKDLs~Lgr-dl~~vVIIDDsp~~ 264 (297)
...+.+|+..+..+.+ ..... .+.+-|..++. +.+.++.|||++..
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d 281 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQV 281 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHH
Confidence 8887677766555521 11111 23445566677 57899999999854
No 26
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.30 E-value=0.00065 Score=64.56 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=58.7
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEE-eCccHHHHHHHHhcCc-EEEEEcCCccccHHHHHHh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVR-QRPYLHMFLEAVASMF-DVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~-~RP~l~eFL~~ls~~f-EIvIfTas~~~YA~~Il~~ 217 (297)
.++-.+|+|||+|||-.... ++ .=|.+-+-|.++.+.+ -+++||.|.+++|...++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 45559999999999975321 22 2388999999999876 8999999999999999999
Q ss_pred hcCCCceeeeEEeccC
Q 022460 218 LDPNQTLIGQRVYRDS 233 (297)
Q Consensus 218 LDP~~~~f~~rL~Rd~ 233 (297)
+.-.+ +|+-.|.+.+
T Consensus 179 ~~L~~-~Fd~ii~~G~ 193 (297)
T PF05152_consen 179 LKLEG-YFDIIICGGN 193 (297)
T ss_pred hCCcc-ccEEEEeCCc
Confidence 98775 8988887554
No 27
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.14 E-value=0.0013 Score=57.24 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=65.6
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccc-----------
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI----------- 209 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~----------- 209 (297)
+++++||+||||+-..... .+. .....+ ...-||+.+.|+.+. +.+.++|-|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~------~~~----~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK------VFP----TSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC------ccc----CChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 4689999999999643210 000 001111 224599999999997 56999999997763
Q ss_pred -cHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccC--CCCCcEEEEECCC
Q 022460 210 -YAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILG--RDLARIAIVDNTP 262 (297)
Q Consensus 210 -YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lg--rdl~~vVIIDDsp 262 (297)
++..+++.+.-. +...+.-+..... .+.+..-+..+| -+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 456677776653 2222322221111 123333445567 7889999999986
No 28
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.06 E-value=0.0016 Score=54.93 Aligned_cols=73 Identities=19% Similarity=0.148 Sum_probs=52.1
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHH-hcCcEEEEEcCCccccHH---------
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAV-ASMFDVVIFTAGQSIYAG--------- 212 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~l-s~~fEIvIfTas~~~YA~--------- 212 (297)
+.+++||||||+..... .+. .....|.+.+.|+++ .+-++|++.|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 47899999999763110 000 134688899999988 457999999999887766
Q ss_pred ---HHHHhhcCCCceeeeEEecc
Q 022460 213 ---QLLDILDPNQTLIGQRVYRD 232 (297)
Q Consensus 213 ---~Il~~LDP~~~~f~~rL~Rd 232 (297)
.+++.|+.++-.++..+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77888887775555555554
No 29
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.98 E-value=0.0015 Score=56.81 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=67.8
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc-cccHHHHHHh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ-SIYAGQLLDI 217 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~-~~YA~~Il~~ 217 (297)
..-..+|+|+|+||..... ....|++.++|++|.+. +.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4556899999999996411 23579999999999875 9999999998 6777777776
Q ss_pred hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460 218 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 218 LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~ 263 (297)
++-.. +..........+.+-+..+|.+.+++++|+|+..
T Consensus 81 ~gl~~-------~~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~ 119 (170)
T TIGR01668 81 LGIPV-------LPHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLF 119 (170)
T ss_pred cCCEE-------EcCCCCCChHHHHHHHHHcCCCHHHEEEECCcch
Confidence 65321 1112222223445556677888999999999973
No 30
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.92 E-value=0.00091 Score=55.31 Aligned_cols=84 Identities=19% Similarity=0.255 Sum_probs=69.0
Q ss_pred EEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460 179 VFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR 254 (297)
Q Consensus 179 ~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~ 254 (297)
......|++.++|+.++ +.+.++|.|.+...++..+++.+... .+|+..+..++....+. .|.+-+..+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 45789999999999999 78999999999999999999998666 47888887765544322 355666677999999
Q ss_pred EEEEECCCc
Q 022460 255 IAIVDNTPQ 263 (297)
Q Consensus 255 vVIIDDsp~ 263 (297)
+++|||++.
T Consensus 153 ~~~vgD~~~ 161 (176)
T PF13419_consen 153 ILFVGDSPS 161 (176)
T ss_dssp EEEEESSHH
T ss_pred EEEEeCCHH
Confidence 999999973
No 31
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.78 E-value=0.0012 Score=58.28 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=67.3
Q ss_pred EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
++..+||+.++|+++.+. +.++|.|++...++...++.++-.. +|+..+..+.....+ ..|.+-++++|-+.+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 457899999999999875 9999999999999999999987764 788877766543322 24667778889999999
Q ss_pred EEEECCC
Q 022460 256 AIVDNTP 262 (297)
Q Consensus 256 VIIDDsp 262 (297)
|.|.|++
T Consensus 171 ~~igDs~ 177 (221)
T TIGR02253 171 VMVGDRL 177 (221)
T ss_pred EEECCCh
Confidence 9999997
No 32
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.69 E-value=0.0022 Score=59.35 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=57.6
Q ss_pred CCCCcEEEEeCCcceeeeecc-----C-CCCCCceeee--eecC---ceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCC
Q 022460 139 AGLPITLVLDLDETLVHSSFD-----N-CKDADFSFPI--HSKM---EVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAG 206 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~-----~-~~~~d~~~~i--~~~~---~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas 206 (297)
.++++.++|||||||+.++.- + ....++.+-+ .+.. ....-.....|++.+||+++.+. +.++|-|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 355679999999999998761 1 0111111100 0000 00112233445599999999875 899999998
Q ss_pred ----ccccHHHHHHhhcCCCceeeeEEeccC
Q 022460 207 ----QSIYAGQLLDILDPNQTLIGQRVYRDS 233 (297)
Q Consensus 207 ----~~~YA~~Il~~LDP~~~~f~~rL~Rd~ 233 (297)
.+.+++.+++.+.-.. +|...+..+.
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~ 169 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDK 169 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCC
Confidence 5568999998887654 5654444443
No 33
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.67 E-value=0.0044 Score=60.63 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=68.1
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC----c--------
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG----Q-------- 207 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas----~-------- 207 (297)
+++.|+||-||||+..... ++. ....-.+...|++.++|+++.+ .+.++|.|+. .
T Consensus 1 ~~k~l~lDrDgtl~~~~~~-----~y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPT-----DFQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCc-----ccc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 4679999999999986421 111 1112247789999999999986 5999999994 2
Q ss_pred ---cccHHHHHHhhcCCCceeeeEEec-----cCeeeeCC---ceeeeccccCCCCCcEEEEECCC
Q 022460 208 ---SIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 208 ---~~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~~g---~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
..++..+++.+ +-.|...++. +.|..... .+..-+..++-+++++++|-|++
T Consensus 69 ~~~~~~i~~iL~~~---gl~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~ 131 (354)
T PRK05446 69 DPPHNLMMQIFESQ---GIKFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRE 131 (354)
T ss_pred hhHHHHHHHHHHHc---CCceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence 23344444444 3335555443 34433221 22233345678889999999986
No 34
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.62 E-value=0.0018 Score=54.92 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=62.2
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV 256 (297)
+..+||+.+||+.+.+ .+.++|.|++...+ ..++..++-.+ +|+..++.+.....+ ..|.+-+.++|.+.+++|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5788999999999986 59999999999988 66666566554 688877755443222 235556677899999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 162 ~vgD~~~ 168 (183)
T TIGR01509 162 FVDDSPA 168 (183)
T ss_pred EEcCCHH
Confidence 9999974
No 35
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.58 E-value=0.00074 Score=59.01 Aligned_cols=83 Identities=18% Similarity=0.155 Sum_probs=54.7
Q ss_pred EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEecc-Ceee-----eCC-ceeeeccccCCCC
Q 022460 180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD-SCVF-----ADG-EYLKDLTILGRDL 252 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd-~C~~-----~~g-~~iKDLs~Lgrdl 252 (297)
.+..+||+.+||+.+.+.+.++|-|++...+++.+++.+.-.. +|..++.-+ .... ..+ ....=+..++...
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3556899999999999779999999999999999999987543 555443221 1100 001 0001112234444
Q ss_pred CcEEEEECCCc
Q 022460 253 ARIAIVDNTPQ 263 (297)
Q Consensus 253 ~~vVIIDDsp~ 263 (297)
.+++.|-|+..
T Consensus 145 ~~~v~iGDs~~ 155 (205)
T PRK13582 145 YRVIAAGDSYN 155 (205)
T ss_pred CeEEEEeCCHH
Confidence 68999999974
No 36
>PRK06769 hypothetical protein; Validated
Probab=96.53 E-value=0.0035 Score=54.63 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=63.3
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcccc-----HHHHHH
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY-----AGQLLD 216 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y-----A~~Il~ 216 (297)
..|.||+||||.-.. .+ ... --+..-||+.++|++|.+ -|.++|.|++.... ......
T Consensus 5 ~~~~~d~d~~~~~~~-------~~----~~~-----~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGGDT-------TI----HYP-----GSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccCCC-------CC----CCH-----HHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 579999999995110 00 000 024568999999999986 58999999876421 122333
Q ss_pred hhcCCCceeeeEEe-c----cCee---eeCCceeeeccccCCCCCcEEEEECCC
Q 022460 217 ILDPNQTLIGQRVY-R----DSCV---FADGEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 217 ~LDP~~~~f~~rL~-R----d~C~---~~~g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
.+..-| |...+. - +... ...+.+.+-++++|.+++++++|+|++
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~ 120 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW 120 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 343333 333232 1 1111 112346677778899999999999997
No 37
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.43 E-value=0.0036 Score=54.98 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=67.2
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---Cceeeecccc-CCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTIL-GRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~L-grdl~~vV 256 (297)
+..+||+.++|+++.+.+.++|-|++...++..+++.+.-.+ +|+..+..+.+...+ ..|.+-+.++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999889999999999999999999986654 788888766654322 2456777888 99999999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
.|+|++
T Consensus 175 ~igD~~ 180 (224)
T TIGR02254 175 MIGDSL 180 (224)
T ss_pred EECCCc
Confidence 999986
No 38
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.41 E-value=0.0015 Score=56.36 Aligned_cols=80 Identities=23% Similarity=0.248 Sum_probs=63.4
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee-------eCCceeeeccccCCCCC
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-------ADGEYLKDLTILGRDLA 253 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~-------~~g~~iKDLs~Lgrdl~ 253 (297)
++..||+.++|+.|. +.++|.|++...++..+++.++-. .+|+..+..+.... ....|.+-+.++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 446799999999997 689999999999999999998654 37887777554322 22345666777899999
Q ss_pred cEEEEECCCc
Q 022460 254 RIAIVDNTPQ 263 (297)
Q Consensus 254 ~vVIIDDsp~ 263 (297)
++++|+|++.
T Consensus 160 ~~l~vgD~~~ 169 (184)
T TIGR01993 160 RAIFFDDSAR 169 (184)
T ss_pred ceEEEeCCHH
Confidence 9999999973
No 39
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.38 E-value=0.0048 Score=52.73 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=64.8
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
+.++||+||||+--... ...+ ....-++..+|+. -++++.+ .+.++|-|+..+..+..+++.+.-.
T Consensus 2 ~~~~~D~Dgtl~~~~~~----------~~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIY----------YTNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEE----------ECCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 46899999999942110 0001 1122335677876 6888875 5899999999999999999988655
Q ss_pred CceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCC
Q 022460 222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
. +|... ......+.+-+..+|.+.++++.|-|+.
T Consensus 69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~ 102 (154)
T TIGR01670 69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDL 102 (154)
T ss_pred E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 3 44421 1111122333455677888999998886
No 40
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.29 E-value=0.004 Score=54.51 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=65.3
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
.+..+||+.++|+.+.+ .+.++|.|++.+.++..+++.++-.+ +|...+..+.....+ ..+.+-++.+|.+.+++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 35789999999999985 49999999999999999999987654 677666555432222 13566677889999999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
++|+|++.
T Consensus 162 ~~igDs~~ 169 (213)
T TIGR01449 162 VYVGDSRV 169 (213)
T ss_pred EEeCCCHH
Confidence 99999973
No 41
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.24 E-value=0.0068 Score=62.23 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=71.0
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcc----------
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS---------- 208 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~---------- 208 (297)
.+.+.+.||+||||+..... ..++. ....+ ..+-|++.+.|+.|.+ -|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg------~~~~~----~~~d~-~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSG------KVFPK----GPDDW-QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCC------ccCCC----CHHHe-eecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 45679999999999965321 00100 01111 2246999999999986 599999999776
Q ss_pred --ccHHHHHHhhcCCCceeeeEEeccCeeeeC---Ccee---eecc-ccCCCCCcEEEEECCC
Q 022460 209 --IYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYL---KDLT-ILGRDLARIAIVDNTP 262 (297)
Q Consensus 209 --~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~i---KDLs-~Lgrdl~~vVIIDDsp 262 (297)
..+..+++.++- .|...+..+.|.+.. |.+. +++. .++.++++.++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 357778887754 366555555554432 3322 3332 2357889999999987
No 42
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.24 E-value=0.0056 Score=54.11 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=67.6
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
.+...||+.++|+++.+ .+.++|.|++.+.++..+++.++-.. +|+..+..+.+...+ ..+.+-+..+|-+.+++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 45688999999999985 58999999999999999999987764 788888776654322 24556667788889999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
++|+|++.
T Consensus 159 ~~iGDs~~ 166 (214)
T PRK13288 159 LMVGDNHH 166 (214)
T ss_pred EEECCCHH
Confidence 99999973
No 43
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.22 E-value=0.0041 Score=57.90 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=68.3
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.++|+.+.+ .+.++|-|++.+.++..+++.+.-.+ +|+..+..+.+...+. .|.+-+.++|.+.+++|
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 5678999999999986 49999999999999999999987654 7888888776543322 46777888899999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 187 ~IgDs~~ 193 (260)
T PLN03243 187 VFGNSNS 193 (260)
T ss_pred EEcCCHH
Confidence 9999973
No 44
>PRK09449 dUMP phosphatase; Provisional
Probab=96.16 E-value=0.0056 Score=54.31 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=66.0
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCC-CCCcEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGR-DLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgr-dl~~vV 256 (297)
+...||+.++|++|.+.+.+.|-|++.+.++..+++.+.-.+ +|+..+..+.+...+ ..|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999877654 788888777654332 245667778885 457899
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 173 ~vgD~~~ 179 (224)
T PRK09449 173 MVGDNLH 179 (224)
T ss_pred EEcCCcH
Confidence 9999973
No 45
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.14 E-value=0.0052 Score=56.24 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=68.0
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.++|+++.+ .+.+.|-|++.+.++..+++.++-.. +|+..+..+.+...+ ..|.+-+.++|.+.++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 5678999999999965 59999999999999999999998764 798888877654332 246677788899999999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
+|.|++
T Consensus 186 ~vgDs~ 191 (248)
T PLN02770 186 VFEDSV 191 (248)
T ss_pred EEcCCH
Confidence 999998
No 46
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.12 E-value=0.0051 Score=53.62 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=64.7
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~vV 256 (297)
+...|++.++|+++.+. |.++|.|++...++..+++.+.-. .+|+..+..+..... ...|.+=++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 45789999999999986 999999999999999999987643 368877776654322 2245566677899999999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
+|+|++
T Consensus 170 ~vgD~~ 175 (198)
T TIGR01428 170 FVASNP 175 (198)
T ss_pred EEeCCH
Confidence 999997
No 47
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.07 E-value=0.0076 Score=52.91 Aligned_cols=83 Identities=17% Similarity=0.090 Sum_probs=66.4
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~v 255 (297)
.+...||+.++|+++.+ .+.++|.|.+...++..+++.++-.+ +|+..+..+++... ...+.+-+.++|-+.+++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 35678999999999975 59999999999999999999988765 78877776654322 223555666788889999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
++|+|++.
T Consensus 152 l~igD~~~ 159 (205)
T TIGR01454 152 VMVGDAVT 159 (205)
T ss_pred EEEcCCHH
Confidence 99999973
No 48
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.00 E-value=0.02 Score=53.08 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=55.5
Q ss_pred CCCCcEEEEeCCcceeeeeccC-CCCCCc-----ee------eeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcC
Q 022460 139 AGLPITLVLDLDETLVHSSFDN-CKDADF-----SF------PIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTA 205 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~-~~~~d~-----~~------~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTa 205 (297)
.++++.+++|+|||+++++.-. .....| .+ --.+. .....+....||+.+||+++. +-++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~-~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTn 138 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMN-NGWDEFSIPKEVARQLIDMHVKRGDSIYFITG 138 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHH-hcccccCcchHHHHHHHHHHHHCCCeEEEEeC
Confidence 4567799999999999864310 000001 00 00000 111334556666999999995 5699999999
Q ss_pred C----ccccHHHHHHhhcC-CCceeeeEEecc
Q 022460 206 G----QSIYAGQLLDILDP-NQTLIGQRVYRD 232 (297)
Q Consensus 206 s----~~~YA~~Il~~LDP-~~~~f~~rL~Rd 232 (297)
. ...+++.+++.+.- ...+|...+..+
T Consensus 139 R~~~k~~~t~~~Llk~~gip~~~~f~vil~gd 170 (237)
T PRK11009 139 RTATKTETVSKTLADDFHIPADNMNPVIFAGD 170 (237)
T ss_pred CCCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence 5 35588888886644 223565444444
No 49
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.98 E-value=0.0044 Score=57.19 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=65.0
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC---------eeeeCCceeeeccccCCC
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS---------CVFADGEYLKDLTILGRD 251 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~---------C~~~~g~~iKDLs~Lgrd 251 (297)
++.-|-|++||-.|.+.+ -++||.|.+..|..+|++|.-.. +|...++-+- |......|-|-++..|-+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 778889999999999887 89999999999999999997775 6877777332 333334455555666776
Q ss_pred -CCcEEEEECCCccc
Q 022460 252 -LARIAIVDNTPQVY 265 (297)
Q Consensus 252 -l~~vVIIDDsp~~~ 265 (297)
+.+++++||+....
T Consensus 177 ~p~~t~FfDDS~~NI 191 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNI 191 (244)
T ss_pred CcCceEEEcCchhhH
Confidence 99999999997543
No 50
>PRK08238 hypothetical protein; Validated
Probab=95.70 E-value=0.0075 Score=61.20 Aligned_cols=47 Identities=17% Similarity=0.052 Sum_probs=39.3
Q ss_pred EeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEecc
Q 022460 182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD 232 (297)
Q Consensus 182 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd 232 (297)
..+|++.++|+++.+ -+.++|-|++.+.+++++++.+.- |+..+..+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd 119 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASD 119 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCC
Confidence 478999999999975 589999999999999999999842 56555544
No 51
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.65 E-value=0.014 Score=51.34 Aligned_cols=83 Identities=18% Similarity=0.179 Sum_probs=62.9
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
....+||+.+||+.+.+ .+.++|.|++...++..+++.++-.+ +|...+..+.+...+ ..+.+-+.+++.+.+++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 36689999999999986 59999999999999999999987654 576544444322111 12445566778899999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
|+|+|++.
T Consensus 170 i~igD~~~ 177 (226)
T PRK13222 170 LFVGDSRN 177 (226)
T ss_pred EEECCCHH
Confidence 99999973
No 52
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.49 E-value=0.017 Score=52.00 Aligned_cols=83 Identities=13% Similarity=-0.027 Sum_probs=65.4
Q ss_pred EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
.+...||+.++|+.+.+. +.+.|-|++...++..+++.++-.. +|...+..+.+...+ ..+.+-++++|-+.+++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 467899999999999865 8999999999999999999886554 677666655543222 23567777889999999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
++|+|++.
T Consensus 172 l~IGDs~~ 179 (229)
T PRK13226 172 VYVGDDER 179 (229)
T ss_pred EEeCCCHH
Confidence 99999974
No 53
>PRK11587 putative phosphatase; Provisional
Probab=95.47 E-value=0.024 Score=50.48 Aligned_cols=82 Identities=16% Similarity=0.113 Sum_probs=61.9
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
.+...||+.++|+.+.+ .+.++|-|++...++..+++...- . ++...+..++....+ ..|.+-+..+|..++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-P-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-C-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 35679999999999975 599999999998888877776643 2 355555555433222 24677778889999999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
|+|+|++.
T Consensus 159 l~igDs~~ 166 (218)
T PRK11587 159 VVVEDAPA 166 (218)
T ss_pred EEEecchh
Confidence 99999983
No 54
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=95.46 E-value=0.0075 Score=54.62 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=70.9
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.+||+.|... .-+.+-|++.+..+..+++.+.-.+ +|...+++++....+ ..|++-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 67899999999999987 9999999999999999999988775 799988877655433 258899999999999999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
+|+|++
T Consensus 164 viEDs~ 169 (221)
T COG0637 164 VVEDSP 169 (221)
T ss_pred EEecch
Confidence 999998
No 55
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=95.46 E-value=0.012 Score=52.32 Aligned_cols=82 Identities=12% Similarity=0.115 Sum_probs=66.1
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV 256 (297)
....||+.++|+.+.+ .+.++|.|++...+++.+++.+.-.+ +|+..+..+.....+. .+.+-++.+|.+.++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4678999999999985 59999999999999999999987654 7887777665432222 45666777899999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
.|+|++.
T Consensus 170 ~igDs~~ 176 (222)
T PRK10826 170 ALEDSFN 176 (222)
T ss_pred EEcCChh
Confidence 9999984
No 56
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.46 E-value=0.0095 Score=50.86 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=61.3
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.++|+.+.+. +.++|-|++ .+++.+++.+.-.+ +|+..+..+.....+ ..|.+-+.++|.+.+++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 56899999999999864 899999987 78899998876553 788777766543322 234555667788899999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 164 ~IgD~~~ 170 (185)
T TIGR02009 164 VFEDALA 170 (185)
T ss_pred EEeCcHh
Confidence 9999963
No 57
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.42 E-value=0.015 Score=54.88 Aligned_cols=93 Identities=17% Similarity=0.073 Sum_probs=55.3
Q ss_pred CCCcEEEEeCCcceeeeecc----CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHH
Q 022460 140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQL 214 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~I 214 (297)
.+++.+|||+|||++..+.- ......|.-. .+..-....-...-||+.+||+.+.+ -..|+|.|.....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~-~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPE-TWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHH-HHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 35789999999999976521 0011111000 00000001124467999999999975 489999999987777755
Q ss_pred HHhhcCCC---ceeeeEEeccC
Q 022460 215 LDILDPNQ---TLIGQRVYRDS 233 (297)
Q Consensus 215 l~~LDP~~---~~f~~rL~Rd~ 233 (297)
++.|...| ..+++.+.|+.
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCC
Confidence 55554443 12356666753
No 58
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.37 E-value=0.03 Score=50.95 Aligned_cols=66 Identities=15% Similarity=0.063 Sum_probs=49.7
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHH--HHHHhh
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAG--QLLDIL 218 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~--~Il~~L 218 (297)
-..+++|+||||++.. ..-||+.++|++|.+ .+.++|.|++.+..++ +.++.+
T Consensus 8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 3478999999998742 247999999999986 5899999999888776 677777
Q ss_pred cCCCceeeeEEec
Q 022460 219 DPNQTLIGQRVYR 231 (297)
Q Consensus 219 DP~~~~f~~rL~R 231 (297)
.-....|...+..
T Consensus 64 gl~~~~~~~Ii~s 76 (242)
T TIGR01459 64 GINADLPEMIISS 76 (242)
T ss_pred CCCccccceEEcc
Confidence 6543145554443
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=95.35 E-value=0.04 Score=47.52 Aligned_cols=81 Identities=14% Similarity=0.186 Sum_probs=58.3
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC-eeeeCCc------------eeeecc
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-CVFADGE------------YLKDLT 246 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~-C~~~~g~------------~iKDLs 246 (297)
+..+||+.++|+.+.+ -+.++|.|++...+++.+++.+.... +|...+..+. -...... +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 5689999999999985 59999999999999999999987653 6665554332 1111111 111133
Q ss_pred ccCCCCCcEEEEECCC
Q 022460 247 ILGRDLARIAIVDNTP 262 (297)
Q Consensus 247 ~Lgrdl~~vVIIDDsp 262 (297)
.+|.+.+++++|.|+.
T Consensus 158 ~~~~~~~~~i~iGDs~ 173 (201)
T TIGR01491 158 ELNPSLTETVAVGDSK 173 (201)
T ss_pred HhCCCHHHEEEEcCCH
Confidence 4577889999999996
No 60
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.28 E-value=0.019 Score=52.21 Aligned_cols=82 Identities=15% Similarity=-0.011 Sum_probs=64.0
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCcee-eeEEeccCeeeeC---CceeeeccccCC-CCCc
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFAD---GEYLKDLTILGR-DLAR 254 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f-~~rL~Rd~C~~~~---g~~iKDLs~Lgr-dl~~ 254 (297)
+...||+.++|+.+.+ .+.+.|-|++...+++.+++.+.-.+ +| +..+..+.....+ ..|.+-+.++|. +.++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 5678999999999986 49999999999999999999987665 44 6666666533222 245677778887 4899
Q ss_pred EEEEECCCc
Q 022460 255 IAIVDNTPQ 263 (297)
Q Consensus 255 vVIIDDsp~ 263 (297)
+|+|.|++.
T Consensus 177 ~l~IGDs~~ 185 (253)
T TIGR01422 177 CVKVGDTVP 185 (253)
T ss_pred eEEECCcHH
Confidence 999999983
No 61
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.18 E-value=0.021 Score=56.55 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=68.6
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV 256 (297)
+...||+.+||+.|.+ .+.+.|-|++.+.+++.+++.+.-.. +|+..+..+++...+. .|.+-+..+|.+.+++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 4568999999999976 59999999999999999999987654 8998888887653322 46677788899999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|.|++.
T Consensus 294 ~IGDS~~ 300 (381)
T PLN02575 294 VFGNSNQ 300 (381)
T ss_pred EEcCCHH
Confidence 9999873
No 62
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.15 E-value=0.016 Score=50.81 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=62.3
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~v 255 (297)
+...+||+.++|+.+.+ .+.++|-|++....+..++.....-..+|+..+..+.+...+. .|.+-++.+|.+++++
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 34579999999999986 5999999999887766554432111346777777666544322 4667778889999999
Q ss_pred EEEECCCcc
Q 022460 256 AIVDNTPQV 264 (297)
Q Consensus 256 VIIDDsp~~ 264 (297)
++|||++..
T Consensus 162 l~vgD~~~d 170 (199)
T PRK09456 162 VFFDDNADN 170 (199)
T ss_pred EEeCCCHHH
Confidence 999999853
No 63
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=95.03 E-value=0.017 Score=49.57 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=64.0
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI 257 (297)
+..-|++ +.|+.+.+.+.++|-|++.+.+++.+++.+.-.+ +|+..+..+++...+. .+.+-++++|.+.+++|+
T Consensus 87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 3455764 8899998778999999999999999999987654 7988888776543332 356667778988999999
Q ss_pred EECCCc
Q 022460 258 VDNTPQ 263 (297)
Q Consensus 258 IDDsp~ 263 (297)
|+|++.
T Consensus 165 igDs~~ 170 (188)
T PRK10725 165 FEDADF 170 (188)
T ss_pred EeccHh
Confidence 999864
No 64
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.97 E-value=0.032 Score=48.71 Aligned_cols=79 Identities=11% Similarity=0.008 Sum_probs=59.8
Q ss_pred EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460 182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI 257 (297)
Q Consensus 182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI 257 (297)
...||+.++|+++.+. +.++|.|++... +..+++.+.-. .+|+..+..+.+...+. .+.+-++.+|.+.+++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 5789999999999865 999999998765 46777776544 36877776555433222 356667788999999999
Q ss_pred EECCC
Q 022460 258 VDNTP 262 (297)
Q Consensus 258 IDDsp 262 (297)
|+|++
T Consensus 183 IgD~~ 187 (203)
T TIGR02252 183 IGDSL 187 (203)
T ss_pred ECCCc
Confidence 99986
No 65
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=94.84 E-value=0.031 Score=52.12 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=62.7
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV 256 (297)
+..+||+.++|+.+.+ .+.++|.|++...++..+++.+.-. .+|...+..+.+..... .+.+=+.++|.+.+++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 4578999999999975 6999999999999999999987654 36776665554332211 24455566788999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 179 ~IGD~~~ 185 (272)
T PRK13223 179 FVGDSRS 185 (272)
T ss_pred EECCCHH
Confidence 9999973
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=94.77 E-value=0.041 Score=48.31 Aligned_cols=102 Identities=16% Similarity=0.054 Sum_probs=60.6
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LD 219 (297)
..+.+|+|+||||+........ .+.....+.. |.+ .=++.+. +.++++|-|......+..+++.+.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~----------~~~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGN----------NGEELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcC----------CCCEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence 4679999999999975210000 1111111211 221 1223333 569999999999999999999986
Q ss_pred CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCC
Q 022460 220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
-.. +|. .+......+.+-+..+|.+.+.++.|-|++
T Consensus 87 l~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~ 122 (183)
T PRK09484 87 ITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL 122 (183)
T ss_pred Cce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 442 343 111111123344456688888999998886
No 67
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.73 E-value=0.076 Score=42.57 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=40.2
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 222 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~ 222 (297)
+++|+||||++.. ..=||+.+||+++.+. ..+++.|.++..-...+.+.|---|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G 55 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG 55 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence 5899999999831 1359999999999975 9999999998776666666664333
No 68
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=94.72 E-value=0.042 Score=48.04 Aligned_cols=79 Identities=14% Similarity=0.150 Sum_probs=62.2
Q ss_pred eCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee--CCceeeeccccCCCCCcEEEEE
Q 022460 183 QRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA--DGEYLKDLTILGRDLARIAIVD 259 (297)
Q Consensus 183 ~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~--~g~~iKDLs~Lgrdl~~vVIID 259 (297)
..|+..++|+.+.+. +.++|.|++.+.+++.+++.+.-. .+|+..+..++.... ...+.+-+..+|-+.+++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 455679999999864 999999999999999999998765 478877776654321 1234566677898999999999
Q ss_pred CCC
Q 022460 260 NTP 262 (297)
Q Consensus 260 Dsp 262 (297)
|++
T Consensus 186 D~~ 188 (197)
T TIGR01548 186 DTV 188 (197)
T ss_pred CCH
Confidence 987
No 69
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.65 E-value=0.06 Score=46.69 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=33.5
Q ss_pred cEEEEeCCcceeeeeccCC---CCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC
Q 022460 143 ITLVLDLDETLVHSSFDNC---KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG 206 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~---~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas 206 (297)
+.+.+|||||||....... ...|| ...-|++-+-|+++.+ -|.|||+|.-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~--------------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDW--------------KFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGG--------------EEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHh--------------hhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 4689999999998754211 11122 3356789999999986 6999999986
No 70
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.64 E-value=0.023 Score=50.00 Aligned_cols=83 Identities=17% Similarity=0.064 Sum_probs=57.5
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCcccc--HHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCC
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY--AGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLA 253 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y--A~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~ 253 (297)
.+...||+.++|+.|.+ .+.++|.|++...+ +...+..+.- ..+|+..+..+.+... ...|.+-++++|.+.+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l-~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDI-MALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhh-HhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 35678999999999986 59999999987655 3222222222 2467776655443322 2246677788899999
Q ss_pred cEEEEECCCc
Q 022460 254 RIAIVDNTPQ 263 (297)
Q Consensus 254 ~vVIIDDsp~ 263 (297)
++++|||++.
T Consensus 171 ~~l~i~D~~~ 180 (211)
T TIGR02247 171 ECVFLDDLGS 180 (211)
T ss_pred HeEEEcCCHH
Confidence 9999999874
No 71
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.63 E-value=0.058 Score=44.87 Aligned_cols=79 Identities=15% Similarity=0.015 Sum_probs=60.3
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
.....||+.++|+.+.+ .+.++|.|++.+..+..+++.+ - ..+|...+..++.. .+ ..+.+-++++|.+. ++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 34456999999999964 5899999999999999999985 2 24677766666543 22 23556667778887 99
Q ss_pred EEEECCC
Q 022460 256 AIVDNTP 262 (297)
Q Consensus 256 VIIDDsp 262 (297)
++|.|++
T Consensus 138 l~iGDs~ 144 (154)
T TIGR01549 138 LHVGDNL 144 (154)
T ss_pred EEEeCCH
Confidence 9999986
No 72
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=94.60 E-value=0.027 Score=49.75 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=63.3
Q ss_pred EEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCC-CceeeeEEeccCeeee---CCceeeeccccCCC-CCc
Q 022460 181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYRDSCVFA---DGEYLKDLTILGRD-LAR 254 (297)
Q Consensus 181 V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~-~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrd-l~~ 254 (297)
....||+.++|+++. +.+.+.|-|++...++..+++.+.-. +.+|...+..+.-... ...+.+=+.++|.. .++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 56999999999999999999998754 2578776665542111 12345556777876 689
Q ss_pred EEEEECCC
Q 022460 255 IAIVDNTP 262 (297)
Q Consensus 255 vVIIDDsp 262 (297)
+++|+|++
T Consensus 166 ~~~igD~~ 173 (220)
T TIGR03351 166 VAVAGDTP 173 (220)
T ss_pred eEEeCCCH
Confidence 99999997
No 73
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.54 E-value=0.044 Score=48.23 Aligned_cols=84 Identities=14% Similarity=0.093 Sum_probs=69.5
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI 257 (297)
+...|++.++|+.+.+.|.++|.|.+...++...+..+- =..+|+..++.+.....+ ..|..-+..+|-++++++.
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 678899999999999889999999999999999999986 345899999887765433 2355667778989999999
Q ss_pred EECCCccc
Q 022460 258 VDNTPQVY 265 (297)
Q Consensus 258 IDDsp~~~ 265 (297)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99998654
No 74
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.54 E-value=0.034 Score=49.08 Aligned_cols=82 Identities=13% Similarity=0.194 Sum_probs=59.2
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee--------e----CC-ceeeecc
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--------A----DG-EYLKDLT 246 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~--------~----~g-~~iKDLs 246 (297)
+..+||+.+||+.+.+ .+.++|-|++...++..+++.+.-.. +|...+.-++..+ . ++ .+.+=++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 4689999999999997 59999999999999999999986554 5655443221110 0 11 1233344
Q ss_pred ccCCCCCcEEEEECCCc
Q 022460 247 ILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 247 ~Lgrdl~~vVIIDDsp~ 263 (297)
+++.+.++++.|.|++.
T Consensus 163 ~~~~~~~~~i~iGDs~~ 179 (219)
T TIGR00338 163 KEGISPENTVAVGDGAN 179 (219)
T ss_pred HcCCCHHHEEEEECCHH
Confidence 56888899999999963
No 75
>PHA02597 30.2 hypothetical protein; Provisional
Probab=94.52 E-value=0.028 Score=49.04 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=54.0
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCC---ceeeeEEeccCeeeeCCceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ---TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~---~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVI 257 (297)
+...||+.++|+.|.+.+.+++-|++.......+++.+.-.+ .+|+..+..+........+.+-++++| .+.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 568999999999999888777777665555544665553221 145666665554332233445556667 678999
Q ss_pred EECCCc
Q 022460 258 VDNTPQ 263 (297)
Q Consensus 258 IDDsp~ 263 (297)
|||++.
T Consensus 151 vgDs~~ 156 (197)
T PHA02597 151 VDDLAH 156 (197)
T ss_pred eCCCHH
Confidence 999974
No 76
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=94.34 E-value=0.035 Score=52.10 Aligned_cols=82 Identities=11% Similarity=0.047 Sum_probs=60.5
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD 259 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIID 259 (297)
+...||+.++|+.|.+ .+.+.|.|++.+.++..+++.++-.. +|+..+..+........+.+-+.+++.+.+++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 4567999999999985 58999999999999999999997654 677655433211111123344455677889999999
Q ss_pred CCCc
Q 022460 260 NTPQ 263 (297)
Q Consensus 260 Dsp~ 263 (297)
|++.
T Consensus 220 Ds~~ 223 (273)
T PRK13225 220 DETR 223 (273)
T ss_pred CCHH
Confidence 9973
No 77
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.21 E-value=0.12 Score=47.17 Aligned_cols=58 Identities=24% Similarity=0.162 Sum_probs=49.3
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcC
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP 220 (297)
.+.+++||||||+.... ..+|...+.|+++. +-..++|-|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 57899999999998632 16889999999884 6799999999999999999999988
Q ss_pred CC
Q 022460 221 NQ 222 (297)
Q Consensus 221 ~~ 222 (297)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 75
No 78
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.02 E-value=0.06 Score=50.68 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=59.2
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc--CCCceeeeEEeccCeeeeC---CceeeeccccCCCCCc
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD--PNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLAR 254 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD--P~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~ 254 (297)
+...||+.++|+.+.+ .+.++|-|++...++..+++.+. ....+|... ..+.+...+ ..+.+-+..+|.+.++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 4689999999999986 59999999999999999998763 111223222 334332211 1355666778999999
Q ss_pred EEEEECCCc
Q 022460 255 IAIVDNTPQ 263 (297)
Q Consensus 255 vVIIDDsp~ 263 (297)
+|+|+|++.
T Consensus 222 ~l~IGDs~~ 230 (286)
T PLN02779 222 CVVVEDSVI 230 (286)
T ss_pred EEEEeCCHH
Confidence 999999973
No 79
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.99 E-value=0.11 Score=49.40 Aligned_cols=84 Identities=18% Similarity=0.252 Sum_probs=58.7
Q ss_pred EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh---cCCCceeeeEEeccCeeeeCC---c----eee-----
Q 022460 180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL---DPNQTLIGQRVYRDSCVFADG---E----YLK----- 243 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L---DP~~~~f~~rL~Rd~C~~~~g---~----~iK----- 243 (297)
-+..|||+.+|+++|.+. ..++|+|+|...+++.+++.+ ++....++.++--+......| . +-|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 377899999999999764 899999999999999999964 344456666665422112212 1 112
Q ss_pred --eccccC--CCCCcEEEEECCCc
Q 022460 244 --DLTILG--RDLARIAIVDNTPQ 263 (297)
Q Consensus 244 --DLs~Lg--rdl~~vVIIDDsp~ 263 (297)
..+.++ .+.+++|+|-|+..
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~ 222 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQG 222 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChh
Confidence 112235 67789999999974
No 80
>PLN02940 riboflavin kinase
Probab=93.99 E-value=0.039 Score=54.23 Aligned_cols=82 Identities=7% Similarity=0.064 Sum_probs=65.5
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHH-hhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLD-ILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 255 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~-~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v 255 (297)
+...||+.++|++|.+. +.+.|-|++.+.++..+++ ..+=. .+|+..+..+++...+ ..+.+-++.+|-+.+++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 45789999999999765 8999999999999998887 45433 4788888888765332 24567777889899999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
|+|+|++.
T Consensus 171 l~VGDs~~ 178 (382)
T PLN02940 171 LVIEDSLP 178 (382)
T ss_pred EEEeCCHH
Confidence 99999974
No 81
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=93.99 E-value=0.077 Score=48.83 Aligned_cols=83 Identities=16% Similarity=0.031 Sum_probs=63.1
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCC-CCcE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRD-LARI 255 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrd-l~~v 255 (297)
+..-||+.++|+.+.+ .+.++|-|++.+..+..+++.+.-.+-+++..+..++....+ ..|.+-++++|-. .+.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 4678999999999975 599999999999999999998765542246666666543222 2456777788874 6899
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
|+|.|++.
T Consensus 180 l~IGDs~~ 187 (267)
T PRK13478 180 VKVDDTVP 187 (267)
T ss_pred EEEcCcHH
Confidence 99999983
No 82
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.85 E-value=0.11 Score=46.37 Aligned_cols=47 Identities=11% Similarity=0.187 Sum_probs=39.9
Q ss_pred EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceee
Q 022460 180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIG 226 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~ 226 (297)
.+..|||+.+||+.+.+. ..++|.|++...|++++++.+.+...++.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~ 115 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYC 115 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEe
Confidence 367999999999999874 99999999999999999999865443444
No 83
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.84 E-value=0.14 Score=47.35 Aligned_cols=57 Identities=19% Similarity=0.115 Sum_probs=45.8
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP 220 (297)
.+.+++||||||+.... ...|...+.|+.+.+. ..++|-|......+..+++.++-
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997411 1357788999999875 89999999888889999998864
Q ss_pred C
Q 022460 221 N 221 (297)
Q Consensus 221 ~ 221 (297)
.
T Consensus 61 ~ 61 (273)
T PRK00192 61 E 61 (273)
T ss_pred C
Confidence 4
No 84
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.81 E-value=0.029 Score=49.69 Aligned_cols=82 Identities=7% Similarity=0.014 Sum_probs=61.6
Q ss_pred EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceee-eEEeccCeeee---CCceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVFA---DGEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~-~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~v 255 (297)
.+...||+.++|+.+. +.++|.|++.+.+++.+++..+-.. +|. ..+..++.... ...|.+-+.++|.+++++
T Consensus 86 ~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 86 ELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred cCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 3567899999999994 8999999999999999998876654 675 34444332221 224566677788889999
Q ss_pred EEEECCCcc
Q 022460 256 AIVDNTPQV 264 (297)
Q Consensus 256 VIIDDsp~~ 264 (297)
|+|+|++.-
T Consensus 163 l~igDs~~d 171 (221)
T PRK10563 163 ILVDDSSAG 171 (221)
T ss_pred EEEeCcHhh
Confidence 999999843
No 85
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.64 E-value=0.17 Score=45.22 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=54.7
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe--ccCeeee------------CC-ceeee
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY--RDSCVFA------------DG-EYLKD 244 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~--Rd~C~~~------------~g-~~iKD 244 (297)
+..|||+.+||+++.+ .+.++|.|++...|++++++.+-+...++...+. .+..... .| ...+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 6789999999999985 5999999999999999999986222223432221 1111100 00 01233
Q ss_pred ccccCCCCCcEEEEECCCc
Q 022460 245 LTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 245 Ls~Lgrdl~~vVIIDDsp~ 263 (297)
+..++.+..++|.|-|+..
T Consensus 153 l~~~~~~~~~~i~iGDs~~ 171 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSIT 171 (219)
T ss_pred HHHhccCCCCEEEEeCCHH
Confidence 3445667789999999963
No 86
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=93.45 E-value=0.11 Score=46.41 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=71.7
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc----cc-------
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ----SI------- 209 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~----~~------- 209 (297)
.+.|+||.||||+--.. ++.-.+ --....||+-+=|..+.+ -|.+||+|.-+ ..
T Consensus 5 ~k~lflDRDGtin~d~~------~yv~~~--------~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYVDSL--------DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------cccCcH--------HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 67999999999985211 111110 013478999999999975 59999999832 22
Q ss_pred -cHHHHHHhhcCCCceeeeEEeccC-----eeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460 210 -YAGQLLDILDPNQTLIGQRVYRDS-----CVFAD---GEYLKDLTILGRDLARIAIVDNTP 262 (297)
Q Consensus 210 -YA~~Il~~LDP~~~~f~~rL~Rd~-----C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp 262 (297)
+-..+++.|--.|--|+.+++-.| |.+.+ |.+..=+...+.|+++.++|=|+.
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcH
Confidence 233366666666667899998332 55543 445555556678999999998884
No 87
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=93.25 E-value=0.12 Score=45.08 Aligned_cols=52 Identities=27% Similarity=0.232 Sum_probs=40.9
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LD 219 (297)
|++||||||++... ..-|...+.|+.+. +-..+++-|.-....+..++..+.
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 53 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG-----------------------KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELG 53 (254)
T ss_dssp EEEECCTTTCSTTS-----------------------SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTT
T ss_pred cEEEECCceecCCC-----------------------eeCHHHHHHHHhhcccceEEEEEccCccccccccccccc
Confidence 68999999998421 14577888888887 568899999888888888888664
No 88
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=93.24 E-value=0.083 Score=45.00 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=57.9
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee---eCCceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF---ADGEYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~---~~g~~iKDLs~Lgrdl~~vV 256 (297)
....||+.++|++|.+ .+.+.|-|++. .+..+++.+.-.. +|+..+..+.-.. ....|.+-+++++.+.+++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 3578999999999985 48999988753 4677888886553 6877665443111 11235666777888999999
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
+|+|++.
T Consensus 163 ~vgD~~~ 169 (185)
T TIGR01990 163 GIEDAQA 169 (185)
T ss_pred EEecCHH
Confidence 9999973
No 89
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=93.09 E-value=0.24 Score=43.87 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=44.8
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
+.+++||||||+.... ...|...+-|+++.+. ..+++-|.-....+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999996311 2467777888888765 889999998888888898888776
Q ss_pred C
Q 022460 222 Q 222 (297)
Q Consensus 222 ~ 222 (297)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 90
>PLN02811 hydrolase
Probab=93.00 E-value=0.073 Score=47.51 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=57.7
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHH-HHHhhcCCCceeeeEEecc--Ceeee---CCceeeeccccC---C
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQ-LLDILDPNQTLIGQRVYRD--SCVFA---DGEYLKDLTILG---R 250 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~-Il~~LDP~~~~f~~rL~Rd--~C~~~---~g~~iKDLs~Lg---r 250 (297)
+...||+.++|+.|.+ .+.+.|-|++.+.++.. +.+...-. .+|+..+..+ .+... ...|.+=+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 4568999999999986 59999999998776554 33322222 3677777777 44322 224556666665 8
Q ss_pred CCCcEEEEECCCc
Q 022460 251 DLARIAIVDNTPQ 263 (297)
Q Consensus 251 dl~~vVIIDDsp~ 263 (297)
+.+.+|+|+|++.
T Consensus 156 ~~~~~v~IgDs~~ 168 (220)
T PLN02811 156 DPGKVLVFEDAPS 168 (220)
T ss_pred CccceEEEeccHh
Confidence 8899999999984
No 91
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.94 E-value=0.092 Score=48.01 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=59.8
Q ss_pred EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC--CceeeeEEeccCee-eeCCceeeeccccCCCCCcE
Q 022460 180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN--QTLIGQRVYRDSCV-FADGEYLKDLTILGRDLARI 255 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~--~~~f~~rL~Rd~C~-~~~g~~iKDLs~Lgrdl~~v 255 (297)
.....|++.++|+++.+ .+.++|+|++...+...+++..+-. ..+|+..+....+. .....|.+-+..+|-+++++
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 35688999999999975 6899999999999888888775311 12454433211111 11234677778889999999
Q ss_pred EEEECCCc
Q 022460 256 AIVDNTPQ 263 (297)
Q Consensus 256 VIIDDsp~ 263 (297)
++|+|++.
T Consensus 173 lfVgDs~~ 180 (220)
T TIGR01691 173 LFLSDIIN 180 (220)
T ss_pred EEEeCCHH
Confidence 99999973
No 92
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.90 E-value=0.23 Score=45.87 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=42.6
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L 218 (297)
+.++.+++||||||++... ..-|-..+-|+++.+. ..+++-|.-....+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 4677999999999998421 0224455667777654 788888888888888888887
Q ss_pred cCC
Q 022460 219 DPN 221 (297)
Q Consensus 219 DP~ 221 (297)
...
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 643
No 93
>PTZ00445 p36-lilke protein; Provisional
Probab=92.81 E-value=0.17 Score=46.64 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=43.0
Q ss_pred CCCCcEEEEeCCccee--eeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcccc
Q 022460 139 AGLPITLVLDLDETLV--HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY 210 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLV--hs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y 210 (297)
..+-+.+++|||.||| |+-..- +++ +....+.-..||.+..++++|.+ .+.|+|-|-|.+.-
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~--~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYI--DPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred HcCCeEEEecchhhhhhhhccccc--CCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 3577899999999997 553211 110 01112334579999999999986 69999999887744
No 94
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.77 E-value=0.066 Score=47.57 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=67.9
Q ss_pred CCCCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHH
Q 022460 135 REPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQ 213 (297)
Q Consensus 135 ~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~ 213 (297)
......+-+.+|+|||+|||--.. . ..-|-+++-+..+... -.++|.|...+.-+..
T Consensus 21 ~~L~~~Gikgvi~DlDNTLv~wd~----------------~------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~ 78 (175)
T COG2179 21 DILKAHGIKGVILDLDNTLVPWDN----------------P------DATPELRAWLAELKEAGIKVVVVSNNKESRVAR 78 (175)
T ss_pred HHHHHcCCcEEEEeccCceecccC----------------C------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHh
Confidence 333457888999999999996321 0 1358899999999976 8999999999999999
Q ss_pred HHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECC
Q 022460 214 LLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261 (297)
Q Consensus 214 Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDs 261 (297)
++..||-.. + ++-. ......+-|-|...+-+.++||.|=|.
T Consensus 79 ~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 79 AAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred hhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcch
Confidence 999888663 1 1111 111122345556667777777777765
No 95
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.67 E-value=0.18 Score=44.55 Aligned_cols=95 Identities=19% Similarity=0.179 Sum_probs=60.0
Q ss_pred CCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCc---EEEEEcCCc-------
Q 022460 138 IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF---DVVIFTAGQ------- 207 (297)
Q Consensus 138 ~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~f---EIvIfTas~------- 207 (297)
...+-+.||+|+|+||+.... -..-|.+.+.++++.+.| .|+|.|.+.
T Consensus 37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD 94 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence 456788999999999985321 125688899999999865 399999984
Q ss_pred cccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeecccc-----CCCCCcEEEEECCC
Q 022460 208 SIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-----GRDLARIAIVDNTP 262 (297)
Q Consensus 208 ~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~L-----grdl~~vVIIDDsp 262 (297)
..-|+.+-+.|.-. .+.|+ +..- +.+-+=++.+ ....+++++|-|+-
T Consensus 95 ~~~a~~~~~~lgIp--vl~h~-----~kKP-~~~~~i~~~~~~~~~~~~p~eiavIGDrl 146 (168)
T PF09419_consen 95 GERAEALEKALGIP--VLRHR-----AKKP-GCFREILKYFKCQKVVTSPSEIAVIGDRL 146 (168)
T ss_pred HHHHHHHHHhhCCc--EEEeC-----CCCC-ccHHHHHHHHhhccCCCCchhEEEEcchH
Confidence 45566666666522 22222 2211 2221112222 23578899998873
No 96
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=92.60 E-value=0.23 Score=45.10 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=40.3
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP 220 (297)
+++||||||++... .-|...++|+++.+. ..+++.|.-+...+..+++.+.-
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 68999999998310 135688999999865 88888888887777788877753
No 97
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=92.53 E-value=0.36 Score=43.79 Aligned_cols=15 Identities=40% Similarity=0.499 Sum_probs=12.9
Q ss_pred CcEEEEeCCcceeee
Q 022460 142 PITLVLDLDETLVHS 156 (297)
Q Consensus 142 k~tLVLDLDeTLVhs 156 (297)
.+.+++||||||+..
T Consensus 3 ~kli~~DlDGTLl~~ 17 (272)
T PRK10530 3 YRVIALDLDGTLLTP 17 (272)
T ss_pred ccEEEEeCCCceECC
Confidence 468999999999975
No 98
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=92.50 E-value=0.25 Score=45.04 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=42.0
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP 220 (297)
.+.+++||||||++... ..-|...+-|+++.+. ..++|-|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997521 1345566777787765 78888888877778888888765
Q ss_pred C
Q 022460 221 N 221 (297)
Q Consensus 221 ~ 221 (297)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 99
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=91.87 E-value=0.028 Score=47.81 Aligned_cols=75 Identities=13% Similarity=0.047 Sum_probs=59.0
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI 257 (297)
+..+||+.++|+. ++|.|++...++..+++.+.-. .+|+..+..+.....+ ..|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 4579999999993 7899999999999999998654 4687766665433222 2466777888999999999
Q ss_pred EECCC
Q 022460 258 VDNTP 262 (297)
Q Consensus 258 IDDsp 262 (297)
|+|++
T Consensus 162 vgD~~ 166 (175)
T TIGR01493 162 VAAHQ 166 (175)
T ss_pred EecCh
Confidence 99996
No 100
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.76 E-value=0.18 Score=47.08 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=76.2
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCce---e------------------eeee-cCceeeEEEEeCccHHHHHHHHhc-C
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFS---F------------------PIHS-KMEVQTVFVRQRPYLHMFLEAVAS-M 197 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~---~------------------~i~~-~~~~~~~~V~~RP~l~eFL~~ls~-~ 197 (297)
....+|+|+|+||+-.. .....+.|. + .-.. -.....-+...=|.+-++++.+.+ .
T Consensus 19 ~~tLvvfDiDdTLi~~~-~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~ 97 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPK-QPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG 97 (252)
T ss_pred CCeEEEEEcchhhhcCc-cccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence 56789999999999654 222211110 0 0000 000123345678999999999995 5
Q ss_pred cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCe---------------eeeCCc-----------eeeeccccCCC
Q 022460 198 FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC---------------VFADGE-----------YLKDLTILGRD 251 (297)
Q Consensus 198 fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C---------------~~~~g~-----------~iKDLs~Lgrd 251 (297)
.-|+..|+..+.+...-++.|---|--|+...+++.- .+.+|. ...=|.++|+.
T Consensus 98 ~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~ 177 (252)
T PF11019_consen 98 IPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQS 177 (252)
T ss_pred CcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCC
Confidence 9999999999999999888874444333333211111 112221 12334567999
Q ss_pred CCcEEEEECCCcc
Q 022460 252 LARIAIVDNTPQV 264 (297)
Q Consensus 252 l~~vVIIDDsp~~ 264 (297)
++++|+|||++..
T Consensus 178 pk~IIfIDD~~~n 190 (252)
T PF11019_consen 178 PKKIIFIDDNKEN 190 (252)
T ss_pred CCeEEEEeCCHHH
Confidence 9999999999843
No 101
>PRK10444 UMP phosphatase; Provisional
Probab=91.69 E-value=0.43 Score=44.17 Aligned_cols=54 Identities=20% Similarity=0.272 Sum_probs=43.0
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP 220 (297)
+.+++||||||++.. ..=|+..++++++.+ ...+++-|.....-+..+.+.|.-
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378999999999852 135899999999986 588899999888777777777743
No 102
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=91.60 E-value=0.49 Score=41.92 Aligned_cols=57 Identities=12% Similarity=0.187 Sum_probs=40.7
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
+.+++||||||+.... ...|...+-|+++.+. ..++|-|.-....+.++++.+...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 5889999999996421 1456667777777754 677777777777777777777655
Q ss_pred C
Q 022460 222 Q 222 (297)
Q Consensus 222 ~ 222 (297)
+
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 3
No 103
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=91.54 E-value=0.38 Score=43.69 Aligned_cols=54 Identities=22% Similarity=0.266 Sum_probs=37.1
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
+++||||||+.... ...|...+.|+++.+. ..++|-|......+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 78999999997421 1345566667777654 777777777777777777766544
No 104
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.50 E-value=0.29 Score=42.72 Aligned_cols=54 Identities=28% Similarity=0.268 Sum_probs=43.0
Q ss_pred EEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD 219 (297)
.+++|+||||+.... -...|.+.+.|+++.+. ..++|-|.....++..+++.++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999997310 12468889999999876 7899999999999999988753
No 105
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=91.47 E-value=0.32 Score=41.32 Aligned_cols=49 Identities=10% Similarity=0.260 Sum_probs=40.7
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~ 230 (297)
+..+|++.++|+.+.+ .+.++|-|++...+++.+++.++-.. +|...+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~ 120 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYS 120 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEec
Confidence 5789999999999976 48999999999999999999876543 5665553
No 106
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=91.46 E-value=0.19 Score=50.24 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=59.6
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee--eCCceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--ADGEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~--~~g~~iKDLs~Lgrdl~~vVI 257 (297)
+..+||+.++|+++.+ .+.+.|.|++.+.++..+++.++-.. +|...+..+.... ....+.+-+..+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 5678999999999975 59999999999999999999987654 7888777654321 111233444444 3578999
Q ss_pred EECCC
Q 022460 258 VDNTP 262 (297)
Q Consensus 258 IDDsp 262 (297)
|.|++
T Consensus 406 VGDs~ 410 (459)
T PRK06698 406 VGDRL 410 (459)
T ss_pred EeCCH
Confidence 99997
No 107
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.40 E-value=0.22 Score=55.24 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=66.8
Q ss_pred eCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEEE
Q 022460 183 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIV 258 (297)
Q Consensus 183 ~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVII 258 (297)
..||+.++|++|.+ .+.++|.|++...+++.+++.+.-...+|+..+..+.+...+ ..|.+-++++|.+.+++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 57999999999975 599999999999999999999865434788888877665332 24667778889999999999
Q ss_pred ECCCc
Q 022460 259 DNTPQ 263 (297)
Q Consensus 259 DDsp~ 263 (297)
+|++.
T Consensus 242 gDs~~ 246 (1057)
T PLN02919 242 EDALA 246 (1057)
T ss_pred cCCHH
Confidence 99973
No 108
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=91.10 E-value=0.32 Score=43.06 Aligned_cols=53 Identities=21% Similarity=0.224 Sum_probs=41.5
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP 220 (297)
++.||||||+.... . .-|-..+.|+.+.+. ..+++-|......+.++++.+.-
T Consensus 2 i~~DlDGTLL~~~~---------------------~--~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 2 VFSDLDGTLLDSHS---------------------Y--DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred EEEeCCCCCcCCCC---------------------C--CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 78999999997421 0 122367888888865 79999999999999999998853
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=90.86 E-value=0.51 Score=43.28 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.4
Q ss_pred cEEEEeCCcceeee
Q 022460 143 ITLVLDLDETLVHS 156 (297)
Q Consensus 143 ~tLVLDLDeTLVhs 156 (297)
+.+++||||||+..
T Consensus 3 kli~~DlDGTLl~~ 16 (272)
T PRK15126 3 RLAAFDMDGTLLMP 16 (272)
T ss_pred cEEEEeCCCcCcCC
Confidence 58899999999974
No 110
>PRK10976 putative hydrolase; Provisional
Probab=90.74 E-value=0.56 Score=42.72 Aligned_cols=14 Identities=36% Similarity=0.453 Sum_probs=12.5
Q ss_pred cEEEEeCCcceeee
Q 022460 143 ITLVLDLDETLVHS 156 (297)
Q Consensus 143 ~tLVLDLDeTLVhs 156 (297)
+.+++||||||+..
T Consensus 3 kli~~DlDGTLl~~ 16 (266)
T PRK10976 3 QVVASDLDGTLLSP 16 (266)
T ss_pred eEEEEeCCCCCcCC
Confidence 58899999999975
No 111
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=90.64 E-value=0.45 Score=45.53 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=38.3
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-----CcEEEEEcCCc----cccHHH
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-----MFDVVIFTAGQ----SIYAGQ 213 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-----~fEIvIfTas~----~~YA~~ 213 (297)
+.+++|+||||++... .-|+..++++.+.. ...+++.|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 3689999999999621 36889999999986 67888888765 345555
Q ss_pred HHHhh
Q 022460 214 LLDIL 218 (297)
Q Consensus 214 Il~~L 218 (297)
+.+.+
T Consensus 57 l~~~l 61 (321)
T TIGR01456 57 ISSLL 61 (321)
T ss_pred HHHHc
Confidence 54443
No 112
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.57 E-value=0.51 Score=43.65 Aligned_cols=56 Identities=18% Similarity=0.109 Sum_probs=38.1
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L 218 (297)
+.+++|+||||++.... . =..=|+..++++++.+. ..+++.|..+..-...+.+.|
T Consensus 2 k~i~~D~DGtl~~~~~~----------------~----~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK----------------S----GVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CEEEEeCCCeEEeCCCc----------------c----cCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 47899999999985210 0 00358999999999865 888888876655433444433
No 113
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=90.22 E-value=0.51 Score=43.06 Aligned_cols=53 Identities=21% Similarity=0.142 Sum_probs=40.9
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP 220 (297)
+++||||||++... ...|...+.++.+.+. ..+++-|.-....+..+++.+..
T Consensus 2 i~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 2 IFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred EEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 78999999998521 0223478899998875 78888888888888888888864
No 114
>PLN02645 phosphoglycolate phosphatase
Probab=89.90 E-value=0.69 Score=44.00 Aligned_cols=55 Identities=15% Similarity=0.068 Sum_probs=41.9
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD 219 (297)
+-..+++|+||||++.. .+ =||..++|+++.+ ...+++-|+....-...+++.|.
T Consensus 27 ~~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~ 82 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE 82 (311)
T ss_pred hCCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 34589999999999842 11 2899999999975 58999999988666666666553
No 115
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=89.89 E-value=0.54 Score=40.57 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=39.6
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHH---HHHHhh
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAG---QLLDIL 218 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~---~Il~~L 218 (297)
+++|+||||+.+..... ..+. + +. . ...|++.++++++.+. +.+++-|+....-+. +.++.+
T Consensus 2 VisDIDGTL~~sd~~~~-----~~~~-~-~~--~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGH-----VVPI-I-GK--D---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccc-----cccc-c-cc--C---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 78999999997642110 0000 0 10 1 2479999999999875 777777777665554 555553
No 116
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.52 E-value=0.64 Score=43.31 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=41.3
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHHhh
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~~L 218 (297)
++..+++|+||||+.....+.. ...-|.+.+-|+.+++ ...++|-|.-...-+..++..+
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CCEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 4689999999999975332210 1234778888888875 4677787777777666666544
No 117
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.45 E-value=0.8 Score=42.64 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=36.2
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L 218 (297)
..+++|+||||++.. ..-|++.++|+++.+ ...+++-|+.+..-...++..|
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l 55 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF 55 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 478999999998741 135789999999986 4788888886544333333333
No 118
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=89.41 E-value=0.77 Score=40.33 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=63.9
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCC
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
-+.+|+|.||+|-.-+.. +.-.|.. ...+..|=+.--.+ --.+.+.+.|-|+....+++.+++.+.-.
T Consensus 7 i~~~v~d~dGv~tdg~~~----------~~~~g~~-~~~~~~~D~~~~~~-L~~~Gi~laIiT~k~~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV----------INDEGIE-SRNFDIKDGMGVIV-LQLCGIDVAIITSKKSGAVRHRAEELKIK 74 (169)
T ss_pred CeEEEEeCceeeECCeEE----------EcCCCcE-EEEEecchHHHHHH-HHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence 568999999999864321 1111222 22234455443221 11356999999999999999999999665
Q ss_pred CceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460 222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~ 263 (297)
.+|... ......+.+-+..+|-+.++++.|-|++.
T Consensus 75 -~~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~n 109 (169)
T TIGR02726 75 -RFHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLV 109 (169)
T ss_pred -EEEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHH
Confidence 355421 10111233444556888899999999873
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=89.10 E-value=0.84 Score=40.19 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=30.2
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD 219 (297)
+++||||||+..... ..|-..+-|+++.+. ..+++-|.-....+.++++.|.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~ 53 (225)
T TIGR01482 1 IASDIDGTLTDPNRA-----------------------INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG 53 (225)
T ss_pred CeEeccCccCCCCcc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 589999999975311 233444445555443 5555655555555555555554
No 120
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=88.52 E-value=1.1 Score=40.73 Aligned_cols=42 Identities=12% Similarity=0.288 Sum_probs=37.7
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 222 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~ 222 (297)
++.|||.++|.+++.++ -.++|-|+|+..|..++++.|--+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke 114 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE 114 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence 78999999999999976 7999999999999999999885443
No 121
>PTZ00174 phosphomannomutase; Provisional
Probab=87.52 E-value=0.96 Score=41.34 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=13.7
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+.+++||||||+++.
T Consensus 5 ~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 5 KTILLFDVDGTLTKPR 20 (247)
T ss_pred CeEEEEECcCCCcCCC
Confidence 5689999999999863
No 122
>PLN02423 phosphomannomutase
Probab=87.32 E-value=1.3 Score=40.75 Aligned_cols=55 Identities=15% Similarity=0.227 Sum_probs=35.1
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhc
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LD 219 (297)
+.+..+++||||||+.... ..-|...+-++++.+...+++.|.. .| ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHhc
Confidence 3455666999999997521 1346667788888877666666654 33 35555554
Q ss_pred C
Q 022460 220 P 220 (297)
Q Consensus 220 P 220 (297)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 123
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=86.96 E-value=0.78 Score=41.18 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=42.8
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEec
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 231 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~R 231 (297)
+..+||+.+|++.+.+.+.++|-|++...++.++++.+.-+. +|..++--
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~ 116 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEI 116 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEE
Confidence 467999999999999888999999999999999999987653 66655543
No 124
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=86.25 E-value=0.99 Score=39.12 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=41.4
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~ 230 (297)
...+|++.++|+.+.+ .+.++|-|++...+++.+++.+.-+. +|..++.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~ 135 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLE 135 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceE
Confidence 3579999999999976 58999999999999999999987664 6766554
No 125
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.24 E-value=1.8 Score=39.74 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=29.8
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ 207 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~ 207 (297)
..+++|+||||++... .=|+..++|+++.+. ..+++-|...
T Consensus 2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~ 43 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNS 43 (249)
T ss_pred CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 3789999999997421 136788888888754 7777777633
No 126
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=85.89 E-value=0.71 Score=43.53 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=42.8
Q ss_pred CCCCcEEEEeCCcceeeeecc---------CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcC-Ccc
Q 022460 139 AGLPITLVLDLDETLVHSSFD---------NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTA-GQS 208 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~---------~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTa-s~~ 208 (297)
..+++.+|||||||.+..+.- +..+.+|..=+ + .---+.=||+.+||+++-++--.|.|-+ -.+
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV--~----a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~ 149 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWV--Q----AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQ 149 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHH--h----hcccccCccHHHHHHHHHhcCcEEEEEeccch
Confidence 346669999999999975421 11122221111 1 1123456999999999998865555544 333
Q ss_pred cc-HHHHHHhhc
Q 022460 209 IY-AGQLLDILD 219 (297)
Q Consensus 209 ~Y-A~~Il~~LD 219 (297)
.- .+.-++-|-
T Consensus 150 ~~~~~~T~~nLk 161 (274)
T COG2503 150 ENEKDGTIENLK 161 (274)
T ss_pred hcccchhHHHHH
Confidence 43 344444443
No 127
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=85.35 E-value=1.3 Score=37.22 Aligned_cols=49 Identities=18% Similarity=0.301 Sum_probs=40.6
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~ 230 (297)
+..||++.++|+.+.+ .+.++|.|++...|++++++.+.-. .++..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~-~~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID-DVFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc-hheeeeEE
Confidence 5579999999999976 4899999999999999999998654 35655544
No 128
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=84.41 E-value=2.2 Score=40.49 Aligned_cols=55 Identities=16% Similarity=0.121 Sum_probs=42.1
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD 219 (297)
+..+..+||||||++-. ..=||+.+||+++.+. -.+++-|.+...-.+.+.+.|.
T Consensus 7 ~y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~ 62 (269)
T COG0647 7 KYDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS 62 (269)
T ss_pred hcCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 34578999999999842 1359999999999976 7888899987766555555443
No 129
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.24 E-value=0.86 Score=46.74 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=58.4
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCc-eeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHH
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKME-VQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~-~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~ 216 (297)
...++.||||||+||+--..-...-. .+...+. ....| =-+++|.+.+.+ -+=+.|-|.....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~----GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVD----GIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCccccccccccccc----ceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 45678999999999997653210000 0000000 00000 024555555554 35666777666666665553
Q ss_pred hhcCCCceeeeEEe-ccCeeee-C-CceeeeccccCCCCCcEEEEECCCcc
Q 022460 217 ILDPNQTLIGQRVY-RDSCVFA-D-GEYLKDLTILGRDLARIAIVDNTPQV 264 (297)
Q Consensus 217 ~LDP~~~~f~~rL~-Rd~C~~~-~-g~~iKDLs~Lgrdl~~vVIIDDsp~~ 264 (297)
+ -|+ .+++.--+ .-.|.+. . .+..|--.+||-.+.-+|+|||+|.-
T Consensus 291 k-hp~-MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~E 339 (574)
T COG3882 291 K-HPD-MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAE 339 (574)
T ss_pred h-CCC-eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHH
Confidence 2 122 11111111 0111111 1 13345556778889999999999843
No 130
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=84.22 E-value=2.3 Score=41.02 Aligned_cols=56 Identities=16% Similarity=0.149 Sum_probs=39.3
Q ss_pred cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
+.+++||||||+.... | .-+-..+-|+++.+. ..||+-|+-+..-+..+.+.|.-+
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5789999999997421 1 123466778888765 777887777666677777777654
No 131
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=84.10 E-value=3.3 Score=44.23 Aligned_cols=60 Identities=15% Similarity=0.062 Sum_probs=43.5
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~ 217 (297)
..+++.++.||||||++... ++. +-..+-|+.+.+. ..+++-|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 47788999999999998521 111 2345567777654 78888888888888888888
Q ss_pred hcCC
Q 022460 218 LDPN 221 (297)
Q Consensus 218 LDP~ 221 (297)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8643
No 132
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=83.73 E-value=1.9 Score=39.30 Aligned_cols=48 Identities=23% Similarity=0.223 Sum_probs=34.3
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc----cccHHHHHH
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ----SIYAGQLLD 216 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~----~~YA~~Il~ 216 (297)
++||+||||+.... .=|++.++++.+.+. +.+++-|.+. ..+++.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 47999999998521 136888999888764 8888888555 345555555
No 133
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=83.41 E-value=1.7 Score=39.49 Aligned_cols=58 Identities=24% Similarity=0.255 Sum_probs=34.1
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCC-ccccHHHHHHhhc
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG-QSIYAGQLLDILD 219 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas-~~~YA~~Il~~LD 219 (297)
++.++.||||||+..... + -...|.+.+-++.+.+.--.+|+.+| +..=+.++++.+.
T Consensus 1 ~~li~tDlDGTLl~~~~~-----~---------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~ 59 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDG-----D---------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP 59 (249)
T ss_pred CeEEEEcCCCcCcCCCCC-----C---------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence 468899999999952100 0 11357777777777766634444444 4444555555443
No 134
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=83.09 E-value=1.2 Score=40.36 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=52.6
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI 257 (297)
+..-||+.++|++|.+.|.++|-|++... ++...- ..+|+..+..+.-...+ ..|.+-++.+|.+.+++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl-~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGL-GDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCc-HHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998764 233322 24676666544322211 2355666778999999999
Q ss_pred EECCC
Q 022460 258 VDNTP 262 (297)
Q Consensus 258 IDDsp 262 (297)
|-|++
T Consensus 186 VGD~~ 190 (238)
T PRK10748 186 VGDDL 190 (238)
T ss_pred EcCCc
Confidence 98884
No 135
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=82.17 E-value=2.2 Score=38.19 Aligned_cols=81 Identities=22% Similarity=0.137 Sum_probs=63.4
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 256 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV 256 (297)
...-||+.+.|+.+++ -|.+.|.|+.....++.+++.++-.. +|...+.-+.+...+. .+..-+..+|.+.+++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 4678999999999996 48999999999999999999988764 7887777343333332 23455567788867999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
+|=|+.
T Consensus 167 ~VGDs~ 172 (220)
T COG0546 167 MVGDSL 172 (220)
T ss_pred EECCCH
Confidence 999986
No 136
>PLN03017 trehalose-phosphatase
Probab=81.20 E-value=1.9 Score=42.62 Aligned_cols=59 Identities=22% Similarity=0.166 Sum_probs=43.0
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHH
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~ 216 (297)
.++..|+||+||||+--...+ + ....-|.+.+-|++|++.+.++|-|--...-+.++++
T Consensus 109 ~k~~llflD~DGTL~Piv~~p----~--------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDP----D--------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCc----c--------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 567899999999999321111 0 1134588889999999889999998887777776643
No 137
>PLN02887 hydrolase family protein
Probab=80.29 E-value=3.2 Score=43.44 Aligned_cols=58 Identities=22% Similarity=0.123 Sum_probs=41.5
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L 218 (297)
.+.+.+++||||||+.... .+-|...+-|+++.+. ..++|-|.-...-+..+++.+
T Consensus 306 ~~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred cCccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 4567999999999997521 1345556667777654 778888877777777788877
Q ss_pred cC
Q 022460 219 DP 220 (297)
Q Consensus 219 DP 220 (297)
+.
T Consensus 363 ~l 364 (580)
T PLN02887 363 DL 364 (580)
T ss_pred Cc
Confidence 64
No 138
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=80.06 E-value=1.5 Score=40.68 Aligned_cols=89 Identities=11% Similarity=0.021 Sum_probs=52.8
Q ss_pred CCCcEEEEeCCcceeeeecc--CC--CCCCc---eeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccH
Q 022460 140 GLPITLVLDLDETLVHSSFD--NC--KDADF---SFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYA 211 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~--~~--~~~d~---~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA 211 (297)
.++..+|||+|||++....- .. ....| .+.-.... ---..-|++.+|++.+.+ -++|++-|.-.+...
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~----~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r 150 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGK----GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELR 150 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHc----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence 57889999999999975420 00 00001 00000000 012467999999999975 589999999887775
Q ss_pred HHHHHhhcCCCce-eeeEEecc
Q 022460 212 GQLLDILDPNQTL-IGQRVYRD 232 (297)
Q Consensus 212 ~~Il~~LDP~~~~-f~~rL~Rd 232 (297)
....+.|--.|-. +.+-+.|.
T Consensus 151 ~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 151 NATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHHHcCCCCcCeeeecC
Confidence 5566666444411 23444454
No 139
>PLN02954 phosphoserine phosphatase
Probab=80.02 E-value=3.9 Score=36.07 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=39.8
Q ss_pred EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCC-ceeeeEE
Q 022460 181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRV 229 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~-~~f~~rL 229 (297)
...+||+.++|+.+.+ .+.++|-|++.+.+++.+++.+.-.. .+|..++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~ 133 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQI 133 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEE
Confidence 4578999999999976 48999999999999999999975432 3565443
No 140
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=79.78 E-value=3 Score=39.49 Aligned_cols=60 Identities=22% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcE--EEEEcCCccccHHHHHH
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD--VVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fE--IvIfTas~~~YA~~Il~ 216 (297)
..+|.+++||.||||.+....+. -+..=+++.+.|+.|+..+. |+|.|.-+..-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 46788999999999998654321 23356789999999999988 77777777777776666
No 141
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=79.69 E-value=1.6 Score=39.83 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=32.9
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEE--EEcCC
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV--IFTAG 206 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv--IfTas 206 (297)
++..|+||+||||+-....+ -..+.=|.+.+.|+.|++....+ |-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999999632211 01234688999999999876544 44443
No 142
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=79.26 E-value=2.6 Score=40.71 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=56.7
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee------------eCCceeeec-c
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF------------ADGEYLKDL-T 246 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~------------~~g~~iKDL-s 246 (297)
+..+||+.++|+.+.+. +.++|.|++...+++.+++.+.-.. .+...+--..... .+...++.+ +
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 56899999999999865 8999999999999999999886543 3333222111110 011122222 3
Q ss_pred ccCCCCCcEEEEECCCc
Q 022460 247 ILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 247 ~Lgrdl~~vVIIDDsp~ 263 (297)
.+|.+++++|.|-|++.
T Consensus 259 ~lgi~~~qtIaVGDg~N 275 (322)
T PRK11133 259 EYEIPLAQTVAIGDGAN 275 (322)
T ss_pred HcCCChhhEEEEECCHH
Confidence 56889999999999973
No 143
>PRK11587 putative phosphatase; Provisional
Probab=78.21 E-value=1.2 Score=39.65 Aligned_cols=16 Identities=44% Similarity=0.470 Sum_probs=13.9
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.++++|||||||+.+.
T Consensus 3 ~k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL 18 (218)
T ss_pred CCEEEEcCCCCcCcCH
Confidence 3589999999999985
No 144
>PLN02151 trehalose-phosphatase
Probab=78.08 E-value=3 Score=41.06 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=44.2
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHH
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~ 216 (297)
.++..|+||+||||+--...| --+..-|.+.+-|+.|++.+.++|-|--...-++.++.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 467899999999999432111 12346799999999999989999988877666666654
No 145
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.04 E-value=1.2 Score=38.00 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.9
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+.+++|+||||+.+.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4579999999999975
No 146
>PHA02597 30.2 hypothetical protein; Provisional
Probab=77.93 E-value=1.3 Score=38.47 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.0
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+.+++||||||++..
T Consensus 3 k~viFDlDGTLiD~~ 17 (197)
T PHA02597 3 PTILTDVDGVLLSWQ 17 (197)
T ss_pred cEEEEecCCceEchh
Confidence 589999999999943
No 147
>PRK11590 hypothetical protein; Provisional
Probab=76.27 E-value=1.4 Score=39.20 Aligned_cols=39 Identities=21% Similarity=0.061 Sum_probs=34.1
Q ss_pred EEeCccHHHHH-HHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460 181 VRQRPYLHMFL-EAVA-SMFDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 181 V~~RP~l~eFL-~~ls-~~fEIvIfTas~~~YA~~Il~~LD 219 (297)
+..+|++.+.| +.+. ..+.++|-|++...|+.+++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5676 479999999999999999999865
No 148
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=75.00 E-value=1.6 Score=38.03 Aligned_cols=14 Identities=43% Similarity=0.665 Sum_probs=12.5
Q ss_pred EEEEeCCcceeeee
Q 022460 144 TLVLDLDETLVHSS 157 (297)
Q Consensus 144 tLVLDLDeTLVhs~ 157 (297)
.+++|+||||+.+.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 57999999999875
No 149
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=74.98 E-value=1.6 Score=38.37 Aligned_cols=16 Identities=38% Similarity=0.594 Sum_probs=13.9
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+.+++|+||||+++.
T Consensus 3 ~~~viFD~DGTL~ds~ 18 (214)
T PRK13288 3 INTVLFDLDGTLINTN 18 (214)
T ss_pred ccEEEEeCCCcCccCH
Confidence 3589999999999975
No 150
>PLN02580 trehalose-phosphatase
Probab=74.86 E-value=4.3 Score=40.46 Aligned_cols=61 Identities=23% Similarity=0.190 Sum_probs=46.8
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHh
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~ 217 (297)
..++..|+||.||||.--...| --+..=|.+.+-|+.|++.+.|+|-|--...-++..+..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 3577899999999998533211 124456899999999999999999999887777776653
No 151
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=73.11 E-value=1.8 Score=37.18 Aligned_cols=14 Identities=43% Similarity=0.525 Sum_probs=12.2
Q ss_pred EEEEeCCcceeeee
Q 022460 144 TLVLDLDETLVHSS 157 (297)
Q Consensus 144 tLVLDLDeTLVhs~ 157 (297)
++++||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999864
No 152
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=72.97 E-value=1.8 Score=37.90 Aligned_cols=15 Identities=40% Similarity=0.738 Sum_probs=13.3
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
..+++||||||+.+.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 479999999999975
No 153
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=72.68 E-value=6.8 Score=40.49 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=60.9
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD 219 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD 219 (297)
+.-.++++.|++++-.. .+.-..||++.++++++.+. ++++|-|...+.+|+.+++.+.
T Consensus 384 g~~~~~~~~~~~~~g~~--------------------~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVF--------------------ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred CCEEEEEEECCEEEEEE--------------------EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34456667777766531 12345899999999999874 9999999999999999999985
Q ss_pred CCCceeeeEEeccCeee-eCCceeeeccccCCCCCcEEEEECCCc
Q 022460 220 PNQTLIGQRVYRDSCVF-ADGEYLKDLTILGRDLARIAIVDNTPQ 263 (297)
Q Consensus 220 P~~~~f~~rL~Rd~C~~-~~g~~iKDLs~Lgrdl~~vVIIDDsp~ 263 (297)
-+ ++. .+.. .+...+|.| ....++++.|-|...
T Consensus 444 i~--~~~------~~~p~~K~~~v~~l---~~~~~~v~~VGDg~n 477 (562)
T TIGR01511 444 IN--VRA------EVLPDDKAALIKEL---QEKGRVVAMVGDGIN 477 (562)
T ss_pred Cc--EEc------cCChHHHHHHHHHH---HHcCCEEEEEeCCCc
Confidence 43 221 1111 111223333 334578899988753
No 154
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=72.56 E-value=2.1 Score=37.68 Aligned_cols=15 Identities=33% Similarity=0.406 Sum_probs=13.2
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+++++|+||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 578999999999875
No 155
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=71.85 E-value=2.4 Score=36.81 Aligned_cols=15 Identities=20% Similarity=0.151 Sum_probs=12.8
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+.+++||||||+.+.
T Consensus 1 k~viFDlDGTL~d~~ 15 (203)
T TIGR02252 1 KLITFDAVGTLLALK 15 (203)
T ss_pred CeEEEecCCceeeeC
Confidence 368999999999864
No 156
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=71.12 E-value=2.1 Score=38.52 Aligned_cols=15 Identities=40% Similarity=0.631 Sum_probs=13.6
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+.++||+||||+.+.
T Consensus 13 k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 13 RAVLFDLDGTLLDSA 27 (229)
T ss_pred CEEEEcCcCccccCH
Confidence 589999999999985
No 157
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=70.77 E-value=2.1 Score=36.25 Aligned_cols=16 Identities=19% Similarity=0.463 Sum_probs=13.7
Q ss_pred cEEEEeCCcceeeeec
Q 022460 143 ITLVLDLDETLVHSSF 158 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~ 158 (297)
+++++|+||||+.+..
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 4789999999998753
No 158
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=70.64 E-value=7.1 Score=35.37 Aligned_cols=83 Identities=17% Similarity=0.264 Sum_probs=61.4
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---Cce---------eee-cc
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEY---------LKD-LT 246 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~---------iKD-Ls 246 (297)
.+++||+.+.++.+.+. +.++|.|+|-..++++|.+.|.-+. .+..++-.++-.+.. |.. ++. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 78999999999999976 9999999999999999999998774 566666655421211 111 111 22
Q ss_pred ccCCCCCcEEEEECCCcc
Q 022460 247 ILGRDLARIAIVDNTPQV 264 (297)
Q Consensus 247 ~Lgrdl~~vVIIDDsp~~ 264 (297)
.+|.++++++-+=|+..-
T Consensus 155 ~~g~~~~~~~a~gDs~nD 172 (212)
T COG0560 155 ELGIPLEETVAYGDSAND 172 (212)
T ss_pred HcCCCHHHeEEEcCchhh
Confidence 448888899998887643
No 159
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=69.91 E-value=4.7 Score=39.58 Aligned_cols=53 Identities=15% Similarity=0.280 Sum_probs=43.9
Q ss_pred eEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh-c-----CC-CceeeeEEe
Q 022460 178 TVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL-D-----PN-QTLIGQRVY 230 (297)
Q Consensus 178 ~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L-D-----P~-~~~f~~rL~ 230 (297)
.-||.+-|++.++|+++.+. ..+.|-|++...|++.+++.+ + ++ ..+|+..+.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 56888999999999999865 899999999999999999997 5 22 456764444
No 160
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=69.87 E-value=2.7 Score=38.11 Aligned_cols=15 Identities=20% Similarity=0.231 Sum_probs=13.2
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
++++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999973
No 161
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=69.84 E-value=2.7 Score=37.64 Aligned_cols=18 Identities=39% Similarity=0.512 Sum_probs=15.1
Q ss_pred CCcEEEEeCCcceeeeec
Q 022460 141 LPITLVLDLDETLVHSSF 158 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~ 158 (297)
..+++++||||||+.+..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~ 20 (220)
T COG0546 3 MIKAILFDLDGTLVDSAE 20 (220)
T ss_pred CCCEEEEeCCCccccChH
Confidence 356899999999999764
No 162
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.78 E-value=2.7 Score=39.11 Aligned_cols=16 Identities=50% Similarity=0.696 Sum_probs=14.0
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+.+++||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 4599999999999984
No 163
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=69.49 E-value=2.6 Score=38.48 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=14.9
Q ss_pred CCCcEEEEeCCcceeeee
Q 022460 140 GLPITLVLDLDETLVHSS 157 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~ 157 (297)
.+-+.++|||||||+.+.
T Consensus 20 ~~~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSD 37 (248)
T ss_pred CccCEEEEcCCCccCcCH
Confidence 344689999999999975
No 164
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=69.47 E-value=2.9 Score=38.88 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=16.4
Q ss_pred CCCCcEEEEeCCcceeeee
Q 022460 139 AGLPITLVLDLDETLVHSS 157 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~ 157 (297)
.+..+.++|||||||+.+.
T Consensus 21 ~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred cCCceEEEEeCCCceeCCc
Confidence 4677889999999999984
No 165
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=68.69 E-value=2.3 Score=39.96 Aligned_cols=17 Identities=35% Similarity=0.471 Sum_probs=14.7
Q ss_pred CCcEEEEeCCcceeeee
Q 022460 141 LPITLVLDLDETLVHSS 157 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~ 157 (297)
..+.+++||||||+.+.
T Consensus 61 ~~k~vIFDlDGTLiDS~ 77 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSL 77 (273)
T ss_pred hcCEEEECCcCccccCH
Confidence 35689999999999986
No 166
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=68.39 E-value=2.7 Score=38.59 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.7
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
-++++||+||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999973
No 167
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=68.37 E-value=2.2 Score=35.30 Aligned_cols=14 Identities=50% Similarity=0.793 Sum_probs=12.4
Q ss_pred EEEEeCCcceeeee
Q 022460 144 TLVLDLDETLVHSS 157 (297)
Q Consensus 144 tLVLDLDeTLVhs~ 157 (297)
++++|+||||+.+.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999975
No 168
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.16 E-value=2.9 Score=37.82 Aligned_cols=16 Identities=38% Similarity=0.517 Sum_probs=13.6
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
-+.+++||||||+.+.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3589999999999864
No 169
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=67.13 E-value=4.8 Score=37.17 Aligned_cols=86 Identities=15% Similarity=0.121 Sum_probs=65.4
Q ss_pred EEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC-----ceeeeccccCCCC
Q 022460 179 VFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG-----EYLKDLTILGRDL 252 (297)
Q Consensus 179 ~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g-----~~iKDLs~Lgrdl 252 (297)
-.++.=||+..+++.|..+ --+.++|++.+.+++..++.+----..|++.+.-+.=....| .|++-.+++|-+.
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 3467789999999999865 799999999999998888877522235777666222222233 4788889999888
Q ss_pred -CcEEEEECCCcc
Q 022460 253 -ARIAIVDNTPQV 264 (297)
Q Consensus 253 -~~vVIIDDsp~~ 264 (297)
+++++.+|+|.-
T Consensus 169 ~~k~lVfeds~~G 181 (222)
T KOG2914|consen 169 PSKCLVFEDSPVG 181 (222)
T ss_pred ccceEEECCCHHH
Confidence 999999999854
No 170
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=66.59 E-value=4.4 Score=34.77 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=55.9
Q ss_pred EEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC-eeeeCCceeeeccccCCCCCcEE
Q 022460 179 VFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-CVFADGEYLKDLTILGRDLARIA 256 (297)
Q Consensus 179 ~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~-C~~~~g~~iKDLs~Lgrdl~~vV 256 (297)
..-..||++.++|++|.+. +.++|.|......|..+.+.+.-.. ..++-+. +......+.+=+..++.+.++|+
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEE
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEE
Confidence 3456899999999999987 8999999999999999999986632 2222221 11111122334445676777999
Q ss_pred EEECCC
Q 022460 257 IVDNTP 262 (297)
Q Consensus 257 IIDDsp 262 (297)
.|=|..
T Consensus 200 ~vGDg~ 205 (215)
T PF00702_consen 200 MVGDGV 205 (215)
T ss_dssp EEESSG
T ss_pred EEccCH
Confidence 998875
No 171
>PRK11590 hypothetical protein; Provisional
Probab=66.44 E-value=7.1 Score=34.68 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=13.6
Q ss_pred CCcEEEEeCCcceeee
Q 022460 141 LPITLVLDLDETLVHS 156 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs 156 (297)
+++.+++||||||++.
T Consensus 5 ~~k~~iFD~DGTL~~~ 20 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ 20 (211)
T ss_pred cceEEEEecCCCCccc
Confidence 5669999999999954
No 172
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=65.74 E-value=3.5 Score=36.19 Aligned_cols=17 Identities=29% Similarity=0.503 Sum_probs=14.5
Q ss_pred CCcEEEEeCCcceeeee
Q 022460 141 LPITLVLDLDETLVHSS 157 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~ 157 (297)
+++.+++|+||||+++.
T Consensus 13 ~~k~iiFD~DGTL~~~~ 29 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAE 29 (219)
T ss_pred cCCEEEEeCcccCCCch
Confidence 45699999999999864
No 173
>PRK09449 dUMP phosphatase; Provisional
Probab=65.57 E-value=3 Score=36.75 Aligned_cols=13 Identities=46% Similarity=0.608 Sum_probs=11.9
Q ss_pred cEEEEeCCcceee
Q 022460 143 ITLVLDLDETLVH 155 (297)
Q Consensus 143 ~tLVLDLDeTLVh 155 (297)
+++++||||||++
T Consensus 4 k~iiFDlDGTLid 16 (224)
T PRK09449 4 DWILFDADETLFH 16 (224)
T ss_pred cEEEEcCCCchhc
Confidence 5899999999996
No 174
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=65.23 E-value=3.3 Score=36.12 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=13.5
Q ss_pred cEEEEeCCcceeeeec
Q 022460 143 ITLVLDLDETLVHSSF 158 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~~ 158 (297)
+.+++|+||||+.+..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 4789999999998653
No 175
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=64.88 E-value=3.2 Score=33.88 Aligned_cols=14 Identities=43% Similarity=0.691 Sum_probs=12.0
Q ss_pred EEEeCCcceeeeec
Q 022460 145 LVLDLDETLVHSSF 158 (297)
Q Consensus 145 LVLDLDeTLVhs~~ 158 (297)
++||+||||+++..
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999998753
No 176
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.79 E-value=2.9 Score=35.42 Aligned_cols=15 Identities=20% Similarity=0.490 Sum_probs=12.7
Q ss_pred EEEEeCCcceeeeec
Q 022460 144 TLVLDLDETLVHSSF 158 (297)
Q Consensus 144 tLVLDLDeTLVhs~~ 158 (297)
.++||+||||+.+..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999998763
No 177
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=64.66 E-value=3.9 Score=36.21 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=14.4
Q ss_pred CCcEEEEeCCcceeeee
Q 022460 141 LPITLVLDLDETLVHSS 157 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~ 157 (297)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999874
No 178
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=64.55 E-value=3.8 Score=35.83 Aligned_cols=15 Identities=20% Similarity=0.417 Sum_probs=13.0
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
++++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999863
No 179
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=64.43 E-value=4.2 Score=38.23 Aligned_cols=18 Identities=39% Similarity=0.637 Sum_probs=15.2
Q ss_pred CCCcEEEEeCCcceeeee
Q 022460 140 GLPITLVLDLDETLVHSS 157 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~ 157 (297)
.+-..+|||+||||+.+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 344689999999999987
No 180
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=64.37 E-value=3.4 Score=35.80 Aligned_cols=15 Identities=33% Similarity=0.370 Sum_probs=12.9
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+.++||+||||+.+.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 378999999999865
No 181
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=64.31 E-value=3.5 Score=36.12 Aligned_cols=16 Identities=44% Similarity=0.536 Sum_probs=13.6
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
-..+++|+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 3489999999999874
No 182
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=63.82 E-value=2.7 Score=36.74 Aligned_cols=13 Identities=54% Similarity=0.692 Sum_probs=11.5
Q ss_pred EEEeCCcceeeee
Q 022460 145 LVLDLDETLVHSS 157 (297)
Q Consensus 145 LVLDLDeTLVhs~ 157 (297)
+|+||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999875
No 183
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=63.37 E-value=3.9 Score=35.05 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=13.3
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+++|+|+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 184
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=62.76 E-value=15 Score=33.00 Aligned_cols=36 Identities=14% Similarity=0.031 Sum_probs=32.6
Q ss_pred EeCccHHHHHH-HHh-cCcEEEEEcCCccccHHHHHHh
Q 022460 182 RQRPYLHMFLE-AVA-SMFDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 182 ~~RP~l~eFL~-~ls-~~fEIvIfTas~~~YA~~Il~~ 217 (297)
..+|++.+.|+ .+. +-..++|-|++...|++++.+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~ 131 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD 131 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh
Confidence 57999999996 777 5899999999999999999977
No 185
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=62.61 E-value=2.9 Score=36.33 Aligned_cols=13 Identities=54% Similarity=0.815 Sum_probs=11.4
Q ss_pred EEEeCCcceeeee
Q 022460 145 LVLDLDETLVHSS 157 (297)
Q Consensus 145 LVLDLDeTLVhs~ 157 (297)
+|+|+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999865
No 186
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=62.07 E-value=8.7 Score=40.90 Aligned_cols=62 Identities=26% Similarity=0.213 Sum_probs=43.9
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHH
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~ 216 (297)
..++..+++|+||||+-....+ + ....-|.+.+.|+.|.+ ...|+|-|.-.....++++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~----~--------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDP----E--------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCc----c--------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 3567899999999999532111 0 11235788899999987 67888888888777776665
Q ss_pred hh
Q 022460 217 IL 218 (297)
Q Consensus 217 ~L 218 (297)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 187
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=61.91 E-value=3.8 Score=34.38 Aligned_cols=15 Identities=40% Similarity=0.634 Sum_probs=12.5
Q ss_pred EEEEeCCcceeeeec
Q 022460 144 TLVLDLDETLVHSSF 158 (297)
Q Consensus 144 tLVLDLDeTLVhs~~ 158 (297)
.+++||||||+.+..
T Consensus 1 ~vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 1 AILFDLDGVLVDTSS 15 (183)
T ss_pred CeeeccCCceechHH
Confidence 379999999999743
No 188
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.38 E-value=3.9 Score=34.51 Aligned_cols=13 Identities=38% Similarity=0.519 Sum_probs=11.7
Q ss_pred EEEeCCcceeeee
Q 022460 145 LVLDLDETLVHSS 157 (297)
Q Consensus 145 LVLDLDeTLVhs~ 157 (297)
+++||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999875
No 189
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=60.41 E-value=9.7 Score=33.26 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=21.2
Q ss_pred EEeCccHHHHHHHHhcC-cEEEEEcCCccc
Q 022460 181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSI 209 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~ 209 (297)
...=||+.+.|+.|.+. +++++-|+....
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 45679999999999988 588888887655
No 190
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=60.09 E-value=8.7 Score=35.36 Aligned_cols=53 Identities=26% Similarity=0.186 Sum_probs=31.1
Q ss_pred CCcEEEEeCCccee-eeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHH-HHhcCcEEEEEcCCccccHHHHHHh
Q 022460 141 LPITLVLDLDETLV-HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE-AVASMFDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 141 ~k~tLVLDLDeTLV-hs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~-~ls~~fEIvIfTas~~~YA~~Il~~ 217 (297)
++..||-|||+||+ ... .-+.-+.++|+ ......-+++-|..+..-+..++..
T Consensus 1 ~~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~ 55 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLRE 55 (247)
T ss_dssp -SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHH
T ss_pred CCEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHh
Confidence 46799999999999 210 01344555666 3334466666666666666666664
No 191
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=59.92 E-value=4.9 Score=35.39 Aligned_cols=16 Identities=38% Similarity=0.397 Sum_probs=13.6
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
...++||+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 4589999999999864
No 192
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=59.83 E-value=5.2 Score=33.78 Aligned_cols=16 Identities=25% Similarity=0.439 Sum_probs=13.7
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
|..+|+|+||||+...
T Consensus 1 ~~~iiFD~dgTL~~~~ 16 (188)
T TIGR01489 1 KVVVVSDFDGTITLND 16 (188)
T ss_pred CeEEEEeCCCcccCCC
Confidence 5689999999999764
No 193
>PLN02954 phosphoserine phosphatase
Probab=58.18 E-value=5.8 Score=34.95 Aligned_cols=17 Identities=18% Similarity=0.261 Sum_probs=14.1
Q ss_pred CCcEEEEeCCcceeeee
Q 022460 141 LPITLVLDLDETLVHSS 157 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~ 157 (297)
..+++|+|+||||+.+.
T Consensus 11 ~~k~viFDfDGTL~~~~ 27 (224)
T PLN02954 11 SADAVCFDVDSTVCVDE 27 (224)
T ss_pred cCCEEEEeCCCcccchH
Confidence 45689999999999763
No 194
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=57.74 E-value=5.3 Score=36.63 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=46.6
Q ss_pred CCCcEEEEeCCcceeeeecc---------CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccc
Q 022460 140 GLPITLVLDLDETLVHSSFD---------NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSI 209 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~---------~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~ 209 (297)
.+++.+|||+|||++....- .....+|.--+. .+.. ..=|+..+|++.+.+. ++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~-~~~~-----~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVA-SGKA-----PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHH-CTGG-----EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHh-cccC-----cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 46789999999999854321 001111110000 1111 3448899999999976 888888887776
Q ss_pred cHHHHHHhhcCCC
Q 022460 210 YAGQLLDILDPNQ 222 (297)
Q Consensus 210 YA~~Il~~LDP~~ 222 (297)
.-+.-++.|.-.|
T Consensus 144 ~r~~T~~nL~~~G 156 (229)
T PF03767_consen 144 QREATEKNLKKAG 156 (229)
T ss_dssp CHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcC
Confidence 6555555554333
No 195
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=54.72 E-value=13 Score=33.24 Aligned_cols=12 Identities=42% Similarity=0.731 Sum_probs=10.7
Q ss_pred EEEeCCcceeee
Q 022460 145 LVLDLDETLVHS 156 (297)
Q Consensus 145 LVLDLDeTLVhs 156 (297)
++.||||||++.
T Consensus 2 i~~DlDgTLl~~ 13 (236)
T TIGR02471 2 IITDLDNTLLGD 13 (236)
T ss_pred eEEeccccccCC
Confidence 789999999984
No 196
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=53.16 E-value=15 Score=30.97 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=37.0
Q ss_pred eCccHH----HHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCCC-ceeeeEE
Q 022460 183 QRPYLH----MFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRV 229 (297)
Q Consensus 183 ~RP~l~----eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~~-~~f~~rL 229 (297)
.+|++. +|++++. ..++++|-|++...+++++++.+.-.. ..+..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 356666 9999984 679999999999999999998776443 3556666
No 197
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=52.81 E-value=12 Score=35.84 Aligned_cols=78 Identities=10% Similarity=0.023 Sum_probs=46.2
Q ss_pred CCcEEEEeCCcceeeeecc--CC--CCCCce---ee-eeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccH
Q 022460 141 LPITLVLDLDETLVHSSFD--NC--KDADFS---FP-IHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYA 211 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~--~~--~~~d~~---~~-i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA 211 (297)
++-.+|||+|||++....- .. ....|. +. -.... --..-=|+..+|++.+.+ -+.|++-|.-.+..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~----~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r 175 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNK----GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQ 175 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhc----ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence 4679999999999953210 00 000010 11 00000 012235899999999975 589999999887666
Q ss_pred HHHHHhhcCCC
Q 022460 212 GQLLDILDPNQ 222 (297)
Q Consensus 212 ~~Il~~LDP~~ 222 (297)
+.=++-|--.|
T Consensus 176 ~aT~~NL~kaG 186 (275)
T TIGR01680 176 AVTEANLKKAG 186 (275)
T ss_pred HHHHHHHHHcC
Confidence 55666665555
No 198
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=52.06 E-value=9.6 Score=36.84 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=14.7
Q ss_pred CCCCcEEEEeCCcceeee
Q 022460 139 AGLPITLVLDLDETLVHS 156 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs 156 (297)
.+++..+|+|+|||||..
T Consensus 107 ~~~~~LvvfDmDGTLI~~ 124 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI 124 (322)
T ss_pred ccCCCEEEEECCCCCcch
Confidence 356679999999999954
No 199
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=51.14 E-value=6.7 Score=39.27 Aligned_cols=17 Identities=29% Similarity=0.460 Sum_probs=14.3
Q ss_pred CcEEEEeCCcceeeeec
Q 022460 142 PITLVLDLDETLVHSSF 158 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~ 158 (297)
-..++|||||||+++..
T Consensus 241 ~k~vIFDlDGTLiDs~~ 257 (459)
T PRK06698 241 LQALIFDMDGTLFQTDK 257 (459)
T ss_pred hhheeEccCCceecchh
Confidence 35899999999998753
No 200
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=51.06 E-value=13 Score=32.62 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=26.9
Q ss_pred EEeCccHHHHHHHHhcCcEEEEEcCCccccH
Q 022460 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYA 211 (297)
Q Consensus 181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA 211 (297)
...-||.++-++++.++|+|+|-||++..|-
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~ 97 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPK 97 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCch
Confidence 4567999999999999999999999966553
No 201
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=50.98 E-value=8.6 Score=34.67 Aligned_cols=15 Identities=40% Similarity=0.656 Sum_probs=13.2
Q ss_pred cEEEEeCCcceeeee
Q 022460 143 ITLVLDLDETLVHSS 157 (297)
Q Consensus 143 ~tLVLDLDeTLVhs~ 157 (297)
+.++||||||||.|.
T Consensus 3 ~avIFD~DGvLvDse 17 (221)
T COG0637 3 KAVIFDMDGTLVDSE 17 (221)
T ss_pred cEEEEcCCCCcCcch
Confidence 478999999999984
No 202
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=48.18 E-value=27 Score=35.92 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=52.3
Q ss_pred EEEeCccHHHHHHHHhc-C-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEE
Q 022460 180 FVRQRPYLHMFLEAVAS-M-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI 257 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~-~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVI 257 (297)
.-..||++.+.|+++.+ . +.++|-|...+.+|..+++.+.-+. +|... . ...+...++. ++....+++.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~----p~~K~~~v~~---l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L----PEDKLAIVKE---LQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C----HHHHHHHHHH---HHHcCCEEEE
Confidence 34589999999999976 4 8999999999999999999997753 44321 0 0001122333 3334458899
Q ss_pred EECCCc
Q 022460 258 VDNTPQ 263 (297)
Q Consensus 258 IDDsp~ 263 (297)
|-|...
T Consensus 453 vGDg~n 458 (556)
T TIGR01525 453 VGDGIN 458 (556)
T ss_pred EECChh
Confidence 988863
No 203
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=46.61 E-value=12 Score=37.15 Aligned_cols=19 Identities=0% Similarity=0.113 Sum_probs=16.2
Q ss_pred CCCCcEEEEeCCcceeeee
Q 022460 139 AGLPITLVLDLDETLVHSS 157 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~ 157 (297)
..+-+.+|||+|||||.+.
T Consensus 128 ~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred cCCCCEEEEcCcCcceeCH
Confidence 3577899999999999865
No 204
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=46.54 E-value=11 Score=32.83 Aligned_cols=16 Identities=31% Similarity=0.449 Sum_probs=13.6
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
.+++++|+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999864
No 205
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=45.97 E-value=12 Score=33.29 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=13.6
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
+.++++|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 5689999999999754
No 206
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=45.83 E-value=11 Score=34.09 Aligned_cols=16 Identities=38% Similarity=0.530 Sum_probs=13.9
Q ss_pred CCCcEEEEeCCcceee
Q 022460 140 GLPITLVLDLDETLVH 155 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVh 155 (297)
..++.+|+|||+||+.
T Consensus 3 ~~~~L~vFD~D~TLi~ 18 (212)
T COG0560 3 RMKKLAVFDLDGTLIN 18 (212)
T ss_pred CccceEEEecccchhh
Confidence 3567899999999998
No 207
>PLN02382 probable sucrose-phosphatase
Probab=45.74 E-value=12 Score=37.38 Aligned_cols=18 Identities=33% Similarity=0.495 Sum_probs=15.0
Q ss_pred CCCCcEEEEeCCcceeee
Q 022460 139 AGLPITLVLDLDETLVHS 156 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs 156 (297)
..+++.||.||||||+..
T Consensus 6 ~~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCCEEEEEcCCCcCcCC
Confidence 356889999999999953
No 208
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=44.65 E-value=12 Score=32.65 Aligned_cols=14 Identities=21% Similarity=0.449 Sum_probs=12.3
Q ss_pred EEEEeCCcceeeee
Q 022460 144 TLVLDLDETLVHSS 157 (297)
Q Consensus 144 tLVLDLDeTLVhs~ 157 (297)
++|+||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999863
No 209
>PLN02940 riboflavin kinase
Probab=44.63 E-value=11 Score=37.11 Aligned_cols=16 Identities=38% Similarity=0.607 Sum_probs=13.7
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
-+.++||+||||+.+.
T Consensus 11 ik~VIFDlDGTLvDt~ 26 (382)
T PLN02940 11 VSHVILDLDGTLLNTD 26 (382)
T ss_pred CCEEEECCcCcCCcCH
Confidence 4579999999999875
No 210
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=44.48 E-value=11 Score=33.71 Aligned_cols=15 Identities=33% Similarity=0.470 Sum_probs=12.0
Q ss_pred EEEEeCCcceeeeec
Q 022460 144 TLVLDLDETLVHSSF 158 (297)
Q Consensus 144 tLVLDLDeTLVhs~~ 158 (297)
..++|||||||...+
T Consensus 3 la~FDlD~TLi~~~w 17 (203)
T TIGR02137 3 IACLDLEGVLVPEIW 17 (203)
T ss_pred EEEEeCCcccHHHHH
Confidence 479999999996533
No 211
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=43.87 E-value=45 Score=31.00 Aligned_cols=42 Identities=19% Similarity=0.329 Sum_probs=36.5
Q ss_pred EEEeCccHHHHHHHHhc---CcEEEEEcCCccccHHHHHHhhcCC
Q 022460 180 FVRQRPYLHMFLEAVAS---MFDVVIFTAGQSIYAGQLLDILDPN 221 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~---~fEIvIfTas~~~YA~~Il~~LDP~ 221 (297)
-+...||..+|++.+++ .++++|-|-|...|.+.||+.-.-.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 36679999999999953 7999999999999999999886544
No 212
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=43.80 E-value=54 Score=30.94 Aligned_cols=58 Identities=21% Similarity=0.217 Sum_probs=37.5
Q ss_pred CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcC
Q 022460 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP 220 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP 220 (297)
.+.+.+|||+||+-.+.+.. |- ..-+.++. .-|+||.-|+-+..-...+-+.|+-
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~-----------------------pA-~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQ-----------------------PA-APVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCC-----------------------cc-chHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 46889999999995322211 11 12334444 4699998888776666667778887
Q ss_pred CCc
Q 022460 221 NQT 223 (297)
Q Consensus 221 ~~~ 223 (297)
+|.
T Consensus 63 ~~~ 65 (274)
T COG3769 63 QGL 65 (274)
T ss_pred CCC
Confidence 753
No 213
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=43.22 E-value=15 Score=37.69 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=54.1
Q ss_pred EEEEeCccHHHHHHHHhcC-c-EEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEE
Q 022460 179 VFVRQRPYLHMFLEAVASM-F-DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256 (297)
Q Consensus 179 ~~V~~RP~l~eFL~~ls~~-f-EIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vV 256 (297)
..-..||++.+.++++.+. + .++|-|...+.+|..+++.+.-.. +|... .. +.+ .+-+..++...++++
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~------~p-~~K-~~~i~~l~~~~~~v~ 429 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAEL------LP-EDK-LEIVKELREKYGPVA 429 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhcc------Cc-HHH-HHHHHHHHhcCCEEE
Confidence 3456899999999999875 8 999999999999999999997653 33211 11 111 223334455567899
Q ss_pred EEECCCc
Q 022460 257 IVDNTPQ 263 (297)
Q Consensus 257 IIDDsp~ 263 (297)
.|-|...
T Consensus 430 ~vGDg~n 436 (536)
T TIGR01512 430 MVGDGIN 436 (536)
T ss_pred EEeCCHH
Confidence 9998853
No 214
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=41.33 E-value=50 Score=28.96 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=38.5
Q ss_pred EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L 218 (297)
+|.|+||||--|-... ...++ -++ . +.|||+-++...++++ |.++=-|+-.-..|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~G-----~i~~~--~G~--d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLG-----HILPI--LGK--D---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchhh-----hhhhc--cCc--h---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 6899999998873210 00111 111 1 5799999999999976 776666666544454444444
No 215
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=40.96 E-value=15 Score=33.06 Aligned_cols=17 Identities=29% Similarity=0.376 Sum_probs=14.0
Q ss_pred CCcEEEEeCCcceeeee
Q 022460 141 LPITLVLDLDETLVHSS 157 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~ 157 (297)
-+...++|+||||++..
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 35678999999999864
No 216
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=40.40 E-value=31 Score=33.75 Aligned_cols=40 Identities=23% Similarity=0.421 Sum_probs=30.9
Q ss_pred EEEEeCc-cHHHHHHHHhc------CcEEEEEcCCccccHHHHHHhh
Q 022460 179 VFVRQRP-YLHMFLEAVAS------MFDVVIFTAGQSIYAGQLLDIL 218 (297)
Q Consensus 179 ~~V~~RP-~l~eFL~~ls~------~fEIvIfTas~~~YA~~Il~~L 218 (297)
+.++.|| +++.-|+.+.+ .++|+|+--|...-+..++...
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4678999 79999999985 4899999888766555555444
No 217
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=37.72 E-value=32 Score=32.37 Aligned_cols=88 Identities=16% Similarity=0.245 Sum_probs=49.8
Q ss_pred EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh---cCCCceeeeEEeccC-eeee--CC----ceeeecccc
Q 022460 180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL---DPNQTLIGQRVYRDS-CVFA--DG----EYLKDLTIL 248 (297)
Q Consensus 180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L---DP~~~~f~~rL~Rd~-C~~~--~g----~~iKDLs~L 248 (297)
-+.+|.|+.+|++.|.++ -=+.|||||...-.+.+++.- -|+=+.++..+.-+. -... .| .+.|+=..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 478999999999999975 689999999998888888775 233344555444322 1111 11 233443222
Q ss_pred --------CCCCCcEEEEECCCccccc
Q 022460 249 --------GRDLARIAIVDNTPQVYLF 267 (297)
Q Consensus 249 --------grdl~~vVIIDDsp~~~~~ 267 (297)
-....+||++=|+..-...
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~M 194 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHM 194 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGT
T ss_pred cCchHHHHhccCCcEEEecCccCChHh
Confidence 2345689999998754433
No 218
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=37.71 E-value=29 Score=31.28 Aligned_cols=51 Identities=25% Similarity=0.166 Sum_probs=29.9
Q ss_pred EEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcE--EEEEcCCccccHHHH
Q 022460 146 VLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD--VVIFTAGQSIYAGQL 214 (297)
Q Consensus 146 VLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fE--IvIfTas~~~YA~~I 214 (297)
.||.||||.--...+ --.+.-|.+.+.|+.|+.... |+|-|.-...-.+..
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 489999998543221 114567999999999998766 888887766653333
No 219
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.70 E-value=48 Score=36.04 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=44.2
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHH
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~ 216 (297)
..++..|+||.||||+.....+. .+.-+..-|.+.+-|+.|++ .-.|+|-|.-...-.++++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 35678899999999994321110 01123456899999999986 47888888877777777665
Q ss_pred h
Q 022460 217 I 217 (297)
Q Consensus 217 ~ 217 (297)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 220
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.01 E-value=62 Score=36.06 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=47.7
Q ss_pred CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHH
Q 022460 139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLD 216 (297)
Q Consensus 139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~ 216 (297)
..++..|+||.||||+--...+...+... ....+..-|.+.+-|+.|+. .-.|+|-|--...-.+..+.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~---------~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQI---------KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccc---------cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 35678899999999996433221111110 01123345789999999986 47899999988888887776
Q ss_pred hh
Q 022460 217 IL 218 (297)
Q Consensus 217 ~L 218 (297)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 55
No 221
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=33.93 E-value=79 Score=24.75 Aligned_cols=15 Identities=47% Similarity=0.625 Sum_probs=13.3
Q ss_pred CcEEEEeCCcceeee
Q 022460 142 PITLVLDLDETLVHS 156 (297)
Q Consensus 142 k~tLVLDLDeTLVhs 156 (297)
..+|||+=|||.|.+
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 579999999999975
No 222
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=33.81 E-value=78 Score=24.97 Aligned_cols=15 Identities=53% Similarity=0.578 Sum_probs=13.2
Q ss_pred CcEEEEeCCcceeee
Q 022460 142 PITLVLDLDETLVHS 156 (297)
Q Consensus 142 k~tLVLDLDeTLVhs 156 (297)
..+|||+=|||.|.+
T Consensus 39 ~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 39 VLTLVLEEDGTAVDS 53 (81)
T ss_pred ceEEEEecCCCEEcc
Confidence 379999999999975
No 223
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=32.55 E-value=36 Score=37.42 Aligned_cols=59 Identities=15% Similarity=0.023 Sum_probs=39.1
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHHh
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDI 217 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~~ 217 (297)
.++..|+||+||||+..... -...-|.+.+-|+.|+. .-.|+|-|.-...-.++.+.-
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 56789999999999953210 01134688888888753 466777777666666666544
Q ss_pred h
Q 022460 218 L 218 (297)
Q Consensus 218 L 218 (297)
+
T Consensus 654 ~ 654 (854)
T PLN02205 654 C 654 (854)
T ss_pred C
Confidence 4
No 224
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=29.61 E-value=36 Score=38.19 Aligned_cols=18 Identities=28% Similarity=0.484 Sum_probs=15.2
Q ss_pred CCCcEEEEeCCcceeeee
Q 022460 140 GLPITLVLDLDETLVHSS 157 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~ 157 (297)
.+-+.++|||||||+++.
T Consensus 73 ~~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCCEEEECCCCCeEeCh
Confidence 455689999999999975
No 225
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=28.87 E-value=92 Score=24.45 Aligned_cols=15 Identities=47% Similarity=0.395 Sum_probs=13.2
Q ss_pred CcEEEEeCCcceeee
Q 022460 142 PITLVLDLDETLVHS 156 (297)
Q Consensus 142 k~tLVLDLDeTLVhs 156 (297)
..+|||+=|||.|..
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 379999999999975
No 226
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=28.51 E-value=1e+02 Score=24.05 Aligned_cols=16 Identities=50% Similarity=0.650 Sum_probs=13.8
Q ss_pred CCcEEEEeCCcceeee
Q 022460 141 LPITLVLDLDETLVHS 156 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs 156 (297)
...+|||+-|||.|..
T Consensus 39 ~~~~lvL~eDGTeVdd 54 (78)
T cd01615 39 APVTLVLEEDGTEVDD 54 (78)
T ss_pred CCeEEEEeCCCcEEcc
Confidence 4579999999999965
No 227
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=28.50 E-value=1e+02 Score=23.84 Aligned_cols=15 Identities=53% Similarity=0.844 Sum_probs=13.4
Q ss_pred CcEEEEeCCcceeee
Q 022460 142 PITLVLDLDETLVHS 156 (297)
Q Consensus 142 k~tLVLDLDeTLVhs 156 (297)
..+|||+=|||.|..
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 579999999999975
No 228
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=28.08 E-value=1.8e+02 Score=29.37 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=49.9
Q ss_pred CCcEEEEeCCccee--eeeccCCC-----CCCceeeee-e-cCceeeEEEEeCcc-------HHHHHHHHhcCc-----E
Q 022460 141 LPITLVLDLDETLV--HSSFDNCK-----DADFSFPIH-S-KMEVQTVFVRQRPY-------LHMFLEAVASMF-----D 199 (297)
Q Consensus 141 ~k~tLVLDLDeTLV--hs~~~~~~-----~~d~~~~i~-~-~~~~~~~~V~~RP~-------l~eFL~~ls~~f-----E 199 (297)
++.-+|||+|.|.. |...+... ..+-..|+. + ...+.-+-..+||| ..+||+.+-+.+ +
T Consensus 138 ~~~~i~LDiD~T~~~~~G~Qe~~~~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~~~fL~~~l~~lr~~~~~ 217 (448)
T PF13701_consen 138 PPKEIVLDIDSTVDDVHGEQEGAVFNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGAAEFLKRVLRRLRQRWPD 217 (448)
T ss_pred ccceEEEecccccccchhhcccccccccCCCcccccceeccCCCCceEEEEccCCCCChHHHHHHHHHHHHHHHhhhCcc
Confidence 34689999999974 54332111 111112332 2 12344566789996 667777765433 2
Q ss_pred -EEEEcCCccccHHHHHHhhcCCCc
Q 022460 200 -VVIFTAGQSIYAGQLLDILDPNQT 223 (297)
Q Consensus 200 -IvIfTas~~~YA~~Il~~LDP~~~ 223 (297)
-+++=+-+--+...+++.++-+|.
T Consensus 218 ~~ILvR~DSgF~~~el~~~ce~~g~ 242 (448)
T PF13701_consen 218 TRILVRGDSGFASPELMDWCEAEGV 242 (448)
T ss_pred ceEEEEecCccCcHHHHHHHHhCCC
Confidence 346777777788889999988774
No 229
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=28.08 E-value=1e+02 Score=24.18 Aligned_cols=16 Identities=56% Similarity=0.723 Sum_probs=13.8
Q ss_pred CCcEEEEeCCcceeee
Q 022460 141 LPITLVLDLDETLVHS 156 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs 156 (297)
...+|||+=|||.|..
T Consensus 41 ~~~~lvL~eDGT~Vdd 56 (80)
T cd06536 41 APITLVLAEDGTIVED 56 (80)
T ss_pred CceEEEEecCCcEEcc
Confidence 4579999999999975
No 230
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=25.87 E-value=1.1e+02 Score=31.05 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=35.6
Q ss_pred CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCc
Q 022460 140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQ 207 (297)
Q Consensus 140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~ 207 (297)
...+..-+|+|+|||.+... ..|+. ....+.+..++.-..+=..=.+-|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg------~vf~~----~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSG------KVFPK----GSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCc------ceeec----cCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 44567899999999986431 12221 123444555555555443334679999999764
No 231
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=25.42 E-value=1.1e+02 Score=31.17 Aligned_cols=53 Identities=19% Similarity=0.319 Sum_probs=41.4
Q ss_pred eEEEEeCccHHHHHHHHhcCc-EEEEEcCCccccHHHHHHhh-cC-------CCceeeeEEe
Q 022460 178 TVFVRQRPYLHMFLEAVASMF-DVVIFTAGQSIYAGQLLDIL-DP-------NQTLIGQRVY 230 (297)
Q Consensus 178 ~~~V~~RP~l~eFL~~ls~~f-EIvIfTas~~~YA~~Il~~L-DP-------~~~~f~~rL~ 230 (297)
.-||.+-|.+..+|+.+.+.- .+.+-|.|...|++.+++.+ ++ .+.+|+-.+.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 457888999999999999886 89999999999999999986 55 3677876665
No 232
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=25.41 E-value=52 Score=33.90 Aligned_cols=23 Identities=22% Similarity=0.299 Sum_probs=18.7
Q ss_pred EEEEEcCCccccHHHHHHh-hcCC
Q 022460 199 DVVIFTAGQSIYAGQLLDI-LDPN 221 (297)
Q Consensus 199 EIvIfTas~~~YA~~Il~~-LDP~ 221 (297)
+.+|-||+.+.|++++++. |.-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4699999999999999965 5433
No 233
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=22.70 E-value=46 Score=28.95 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=12.0
Q ss_pred CcEEEEeCCcceeeee
Q 022460 142 PITLVLDLDETLVHSS 157 (297)
Q Consensus 142 k~tLVLDLDeTLVhs~ 157 (297)
|+.|.+|+||||....
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4559999999999754
No 234
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=22.46 E-value=55 Score=25.53 Aligned_cols=16 Identities=44% Similarity=0.561 Sum_probs=13.7
Q ss_pred CCcEEEEeCCcceeee
Q 022460 141 LPITLVLDLDETLVHS 156 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs 156 (297)
...+|||+-|||.|..
T Consensus 39 ~~~~lvL~eDGT~Vdd 54 (78)
T PF02017_consen 39 EPVRLVLEEDGTEVDD 54 (78)
T ss_dssp STCEEEETTTTCBESS
T ss_pred cCcEEEEeCCCcEEcc
Confidence 4568999999999984
No 235
>PHA03050 glutaredoxin; Provisional
Probab=21.54 E-value=1.1e+02 Score=24.69 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.3
Q ss_pred HHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCC
Q 022460 188 HMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222 (297)
Q Consensus 188 ~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~ 222 (297)
.+|++.+.+.-.|+|||.+.=.|...+.+.|+-.+
T Consensus 3 ~~~v~~~i~~~~V~vys~~~CPyC~~ak~~L~~~~ 37 (108)
T PHA03050 3 EEFVQQRLANNKVTIFVKFTCPFCRNALDILNKFS 37 (108)
T ss_pred HHHHHHHhccCCEEEEECCCChHHHHHHHHHHHcC
Confidence 57888888888999999999999999999998776
No 236
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=21.33 E-value=4.3e+02 Score=22.93 Aligned_cols=120 Identities=17% Similarity=0.137 Sum_probs=66.2
Q ss_pred CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCC-ccccHHHHHHhh
Q 022460 141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAG-QSIYAGQLLDIL 218 (297)
Q Consensus 141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas-~~~YA~~Il~~L 218 (297)
+....++|||-||+-+--.-.-...|. |+.-.....+.-...=|...--|..|++. -++++-+-+ .+.||.+.|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfk-P~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFK-PFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEeccccccc-ccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 345788999999875432211111110 01001112333455668888999999975 788887776 579999999998
Q ss_pred cCCCceeeeEEeccCee---eeCC---ceeeecccc-CCCCCcEEEEECCC
Q 022460 219 DPNQTLIGQRVYRDSCV---FADG---EYLKDLTIL-GRDLARIAIVDNTP 262 (297)
Q Consensus 219 DP~~~~f~~rL~Rd~C~---~~~g---~~iKDLs~L-grdl~~vVIIDDsp 262 (297)
--... +--+-.-+--. ..+| .+.|++..- |...++..+.||..
T Consensus 83 kvk~~-Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDes 132 (144)
T KOG4549|consen 83 KVKQT-GVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDES 132 (144)
T ss_pred ccCcc-cccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccc
Confidence 54321 11111111111 1122 234666543 66677788888753
No 237
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=20.04 E-value=45 Score=31.75 Aligned_cols=11 Identities=55% Similarity=0.851 Sum_probs=10.0
Q ss_pred EEEEeCCccee
Q 022460 144 TLVLDLDETLV 154 (297)
Q Consensus 144 tLVLDLDeTLV 154 (297)
..|.|||||||
T Consensus 4 VfvWDlDETlI 14 (274)
T TIGR01658 4 VYVWDMDETLI 14 (274)
T ss_pred eEEEeccchHH
Confidence 67999999987
Done!