Query 022461
Match_columns 297
No_of_seqs 239 out of 1568
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 03:42:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022461.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022461hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 4.1E-39 9E-44 277.2 19.9 190 72-295 1-195 (203)
2 PRK14116 gpmA phosphoglyceromu 100.0 1.1E-38 2.3E-43 279.2 20.8 192 73-291 1-222 (228)
3 PRK15004 alpha-ribazole phosph 100.0 2.6E-38 5.6E-43 271.4 20.0 185 74-293 1-190 (199)
4 PRK14119 gpmA phosphoglyceromu 100.0 4.8E-38 1E-42 275.2 20.5 189 73-288 1-219 (228)
5 PRK03482 phosphoglycerate muta 100.0 1.1E-37 2.4E-42 270.7 22.1 189 73-295 1-198 (215)
6 PRK13462 acid phosphatase; Pro 100.0 9.2E-38 2E-42 268.5 20.7 186 71-293 3-188 (203)
7 PRK14117 gpmA phosphoglyceromu 100.0 1.5E-37 3.3E-42 272.1 21.4 190 73-289 1-220 (230)
8 PRK14120 gpmA phosphoglyceromu 100.0 4E-37 8.7E-42 271.8 21.1 193 71-291 2-223 (249)
9 TIGR03848 MSMEG_4193 probable 100.0 3.6E-37 7.8E-42 265.3 19.3 191 75-294 1-194 (204)
10 PRK14118 gpmA phosphoglyceromu 100.0 6.2E-37 1.3E-41 267.8 21.0 188 74-288 1-218 (227)
11 PRK01295 phosphoglyceromutase; 100.0 1.2E-36 2.7E-41 262.1 21.1 192 72-291 1-198 (206)
12 PRK01112 phosphoglyceromutase; 100.0 7.5E-37 1.6E-41 267.1 19.7 191 73-292 1-221 (228)
13 TIGR01258 pgm_1 phosphoglycera 100.0 3.4E-36 7.4E-41 265.6 21.4 190 74-290 1-220 (245)
14 TIGR03162 ribazole_cobC alpha- 100.0 1.6E-36 3.4E-41 255.3 17.2 172 76-283 1-177 (177)
15 PRK14115 gpmA phosphoglyceromu 100.0 8.8E-36 1.9E-40 263.2 21.6 189 74-289 1-219 (247)
16 COG0406 phoE Broad specificity 100.0 1E-35 2.3E-40 256.8 19.6 186 72-289 1-191 (208)
17 PRK07238 bifunctional RNase H/ 100.0 4.5E-35 9.9E-40 274.0 23.1 192 70-295 168-364 (372)
18 KOG0235 Phosphoglycerate mutas 100.0 1.4E-31 3E-36 227.5 17.8 192 71-289 3-202 (214)
19 PTZ00322 6-phosphofructo-2-kin 100.0 1.1E-30 2.4E-35 260.2 18.1 187 73-290 419-629 (664)
20 smart00855 PGAM Phosphoglycera 100.0 9.3E-31 2E-35 215.6 14.5 154 75-257 1-155 (155)
21 PF00300 His_Phos_1: Histidine 100.0 3.5E-31 7.6E-36 217.5 11.9 153 75-257 1-158 (158)
22 PTZ00123 phosphoglycerate muta 100.0 8.3E-30 1.8E-34 224.0 19.2 176 86-288 1-206 (236)
23 COG0588 GpmA Phosphoglycerate 100.0 8.9E-30 1.9E-34 212.6 15.0 193 73-292 1-223 (230)
24 PTZ00122 phosphoglycerate muta 100.0 2.3E-28 5E-33 221.1 21.6 179 73-295 102-284 (299)
25 cd07067 HP_PGM_like Histidine 99.9 3.1E-26 6.7E-31 187.9 17.2 149 75-294 1-150 (153)
26 KOG4754 Predicted phosphoglyce 99.9 4.9E-24 1.1E-28 177.5 14.7 190 69-283 10-222 (248)
27 cd07040 HP Histidine phosphata 99.9 4.9E-22 1.1E-26 162.3 16.6 143 75-287 1-143 (153)
28 TIGR00249 sixA phosphohistidin 99.9 5.4E-21 1.2E-25 157.0 17.7 148 74-295 1-148 (152)
29 KOG4609 Predicted phosphoglyce 99.9 2.2E-21 4.7E-26 161.8 12.8 178 70-294 91-268 (284)
30 PRK10848 phosphohistidine phos 99.8 9E-20 2E-24 150.8 17.5 147 74-294 1-147 (159)
31 KOG0234 Fructose-6-phosphate 2 99.8 3E-20 6.5E-25 171.4 15.7 186 70-294 236-427 (438)
32 PRK06193 hypothetical protein; 99.8 2.3E-19 5E-24 153.3 16.3 152 73-294 42-195 (206)
33 KOG3734 Predicted phosphoglyce 99.8 6.4E-19 1.4E-23 154.3 14.9 172 71-266 10-218 (272)
34 COG2062 SixA Phosphohistidine 99.8 4.5E-18 9.8E-23 139.4 15.5 141 73-286 1-141 (163)
35 PRK15416 lipopolysaccharide co 99.8 1.4E-17 3.1E-22 141.0 15.3 123 71-265 52-174 (201)
36 cd07061 HP_HAP_like Histidine 98.6 9E-06 2E-10 71.5 18.2 72 74-161 4-75 (242)
37 PF00328 His_Phos_2: Histidine 97.5 0.00046 1E-08 63.2 9.1 57 101-160 61-117 (347)
38 PRK10173 glucose-1-phosphatase 97.0 0.0062 1.3E-07 57.9 10.8 88 73-160 32-129 (413)
39 KOG3720 Lysosomal & prostatic 96.9 0.005 1.1E-07 58.6 9.1 86 73-161 35-129 (411)
40 PRK10172 phosphoanhydride phos 96.8 0.019 4.1E-07 54.8 11.6 88 73-160 35-131 (436)
41 KOG1057 Arp2/3 complex-interac 91.3 0.28 6.1E-06 49.3 4.6 57 102-160 511-572 (1018)
42 KOG3672 Histidine acid phospha 49.4 46 0.001 31.4 5.9 54 102-156 168-223 (487)
43 PLN02517 phosphatidylcholine-s 47.9 35 0.00076 34.2 5.2 46 204-261 186-231 (642)
44 PF01764 Lipase_3: Lipase (cla 42.4 73 0.0016 24.5 5.5 39 212-262 45-85 (140)
45 PF14606 Lipase_GDSL_3: GDSL-l 41.3 28 0.0006 29.2 2.9 34 208-253 71-104 (178)
46 PF12048 DUF3530: Protein of u 36.8 78 0.0017 28.9 5.5 28 239-266 189-216 (310)
47 PF06180 CbiK: Cobalt chelatas 36.2 37 0.0008 30.3 3.1 69 177-256 79-155 (262)
48 COG2138 Sirohydrochlorin ferro 30.3 3.8E+02 0.0083 23.6 8.7 105 73-212 2-106 (245)
49 PF09370 TIM-br_sig_trns: TIM- 29.1 37 0.0008 30.4 1.9 37 206-256 190-226 (268)
50 KOG2369 Lecithin:cholesterol a 27.7 1E+02 0.0022 29.9 4.6 45 205-261 156-200 (473)
51 PF02450 LCAT: Lecithin:choles 27.4 87 0.0019 29.5 4.3 43 209-264 98-140 (389)
52 TIGR02935 probable nitrogen fi 27.3 31 0.00068 27.6 1.0 53 177-229 17-69 (140)
53 PF07819 PGAP1: PGAP1-like pro 26.3 1.2E+02 0.0026 26.2 4.6 42 207-255 56-97 (225)
54 KOG1382 Multiple inositol poly 25.9 1.4E+02 0.0029 29.0 5.1 55 100-161 130-184 (467)
55 PF05990 DUF900: Alpha/beta hy 25.6 1.5E+02 0.0034 25.7 5.2 46 207-264 69-114 (233)
56 cd00519 Lipase_3 Lipase (class 25.3 2.2E+02 0.0047 24.2 6.1 42 209-262 106-149 (229)
57 COG1117 PstB ABC-type phosphat 23.1 2.4E+02 0.0052 24.8 5.7 46 215-285 186-231 (253)
58 PF00328 His_Phos_2: Histidine 23.0 5.3E+02 0.012 22.8 9.2 78 208-287 256-334 (347)
59 PF06821 Ser_hydrolase: Serine 22.8 1.3E+02 0.0028 24.8 4.0 20 242-261 54-73 (171)
60 PRK04946 hypothetical protein; 22.4 3.1E+02 0.0067 23.0 6.2 45 206-264 101-148 (181)
61 PF11760 CbiG_N: Cobalamin syn 21.6 1.8E+02 0.0039 21.2 4.0 42 241-294 12-53 (84)
62 PRK00035 hemH ferrochelatase; 21.1 4.7E+02 0.01 23.9 7.8 16 241-256 188-203 (333)
63 PF05060 MGAT2: N-acetylglucos 20.5 2.1E+02 0.0045 26.9 5.1 27 240-266 58-84 (356)
64 PLN02847 triacylglycerol lipas 20.2 3.5E+02 0.0075 27.4 6.8 42 210-263 230-273 (633)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=4.1e-39 Score=277.15 Aligned_cols=190 Identities=21% Similarity=0.296 Sum_probs=162.5
Q ss_pred CCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHH
Q 022461 72 RPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQT 151 (297)
Q Consensus 72 ~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qT 151 (297)
|+++||||||||+.+|..++++|.. |.|||+.|++||+.+++.|+...+ + .|||||+.||+||
T Consensus 1 m~~~i~lvRHG~t~~n~~~~~~G~~---d~~Lt~~G~~Qa~~~~~~l~~~~~----~----------~i~sSpl~Ra~qT 63 (203)
T PRK13463 1 MKTTVYVTRHGETEWNVAKRMQGRK---NSALTENGILQAKQLGERMKDLSI----H----------AIYSSPSERTLHT 63 (203)
T ss_pred CceEEEEEeCCCCccchhCcccCCC---CCCcCHHHHHHHHHHHHHhcCCCC----C----------EEEECCcHHHHHH
Confidence 3578999999999999988877753 689999999999999999976543 3 9999999999999
Q ss_pred HHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCcc-----ccCCCCCCHHHHHHHHHHHHHHHHh
Q 022461 152 LQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFF-----YRFPNGESAADVYDRITGFRETLRA 226 (297)
Q Consensus 152 A~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~-----~~~p~gEs~~~~~~R~~~~l~~l~~ 226 (297)
|++++..++. ++.+++.|+|+++|.|+|++..++.+.++..+..|+ +.+|+|||+.++..|+..+++++..
T Consensus 64 A~~i~~~~~~----~~~~~~~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~ 139 (203)
T PRK13463 64 AELIKGERDI----PIIADEHFYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLE 139 (203)
T ss_pred HHHHHhcCCC----CceECcCceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHH
Confidence 9999876653 689999999999999999999999887776664443 5678999999999999999999986
Q ss_pred hhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEee
Q 022461 227 DIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIFI 295 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~~ 295 (297)
..++++|+|||||++|++++++++|.+.+.++....+.||++++++++ ++.+.+..
T Consensus 140 ------------~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~ 195 (203)
T PRK13463 140 ------------KHKGESILIVSHAAAAKLLVGHFAGIEIENVWDDPFMHSASLSIIEFE-DGKGEVKQ 195 (203)
T ss_pred ------------hCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhhccCccCceEEEEEEe-CCcEEEEE
Confidence 345678999999999999999999999988876535799999999996 44566543
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.1e-38 Score=279.18 Aligned_cols=192 Identities=24% Similarity=0.297 Sum_probs=159.4
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++||||||||+.+|..++++|+. |.|||+.|++||+++++.|+..... ++ .||||||.||+|||
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~---D~pLt~~G~~QA~~l~~~L~~~~~~--~d----------~i~sSpL~Ra~qTA 65 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWV---DVDLSEKGVEEAKKAGRLIKEAGLE--FD----------QAYTSVLTRAIKTL 65 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCC---CCCcCHHHHHHHHHHHHHHHhcCCC--CC----------EEEECChHHHHHHH
Confidence 478999999999999998888765 6899999999999999999863211 23 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCc-----------------------------cc
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRF-----------------------------FY 202 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~-----------------------------~~ 202 (297)
++|+...+.. ..++.++++|+|++||.|+|+++.++...++.. +..| ..
T Consensus 66 ~~i~~~~~~~-~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (228)
T PRK14116 66 HYALEESDQL-WIPETKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPR 144 (228)
T ss_pred HHHHHhcCcC-CCCcccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCcc
Confidence 9998764421 135788999999999999999999988766543 1110 13
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEE
Q 022461 203 RFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIV 282 (297)
Q Consensus 203 ~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~ 282 (297)
.+|+|||+.++..|+..++++++.. ...++++|||||||++|+++++++++++.+.+..+ .++||++++
T Consensus 145 ~~pgGEs~~~~~~Rv~~~l~~~i~~----------~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~-~~~~~~~~~ 213 (228)
T PRK14116 145 IIPGGENLKVTLERVIPFWEDHIAP----------DLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNL-EMATGEPVV 213 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHH----------hhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhc-cCCCCCeEE
Confidence 5799999999999999999997641 01356799999999999999999999999998888 899999999
Q ss_pred EEecCCCeE
Q 022461 283 MEKGYGGRY 291 (297)
Q Consensus 283 l~~~~~g~~ 291 (297)
+++++++..
T Consensus 214 ~~~~~~~~~ 222 (228)
T PRK14116 214 YDFDEKLNV 222 (228)
T ss_pred EEECCCCCc
Confidence 999987643
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=2.6e-38 Score=271.40 Aligned_cols=185 Identities=23% Similarity=0.274 Sum_probs=159.0
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
++||||||||+.+|..++++|.. |.|||+.|++||+.+++.|+...+. .|||||+.||+|||+
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~---d~pLt~~G~~Qa~~~~~~l~~~~~~--------------~i~sSpl~Ra~qTA~ 63 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHA---PTPLTARGIEQAQNLHTLLRDVPFD--------------LVLCSELERAQHTAR 63 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCC---CCCcCHHHHHHHHHHHHHHhCCCCC--------------EEEECchHHHHHHHH
Confidence 47999999999999988777653 6899999999999999999865433 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCcc-----ccCCCCCCHHHHHHHHHHHHHHHHhhh
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFF-----YRFPNGESAADVYDRITGFRETLRADI 228 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~-----~~~p~gEs~~~~~~R~~~~l~~l~~~~ 228 (297)
++++.++. ++.+++.|+|+++|.|+|++..++...++..|..|. ..+|+|||+.++..|+..+++++.+
T Consensus 64 ~i~~~~~~----~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~-- 137 (199)
T PRK15004 64 LVLSDRQL----PVHIIPELNEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSA-- 137 (199)
T ss_pred HHHhcCCC----CceeChhheeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHH--
Confidence 99987654 588999999999999999999988766665554332 3567999999999999999999986
Q ss_pred cCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEE
Q 022461 229 DHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSI 293 (297)
Q Consensus 229 ~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l 293 (297)
..++++|+|||||++|+++++++++.+.+.++.+ .++||++++++++ ++.+.+
T Consensus 138 ----------~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~~~~ 190 (199)
T PRK15004 138 ----------FQHYQNLLIVSHQGVLSLLIARLLGMPAEAMWHF-RVEQGCWSAIDIN-QGFATL 190 (199)
T ss_pred ----------hCCCCeEEEEcChHHHHHHHHHHhCCCHHHHhcc-ccCCceEEEEEec-CCcEEE
Confidence 3456789999999999999999999999988887 7999999999996 444544
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.8e-38 Score=275.17 Aligned_cols=189 Identities=21% Similarity=0.259 Sum_probs=156.4
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++||||||||+.+|..++++|+. |.|||+.|++||++++++|+..... ++ .||||||.||+|||
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~---D~pLt~~G~~QA~~l~~~L~~~~~~--~d----------~i~sSpL~Ra~~TA 65 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWE---DVNLSEQGINEATRAGEKVRENNIA--ID----------VAFTSLLTRALDTT 65 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCC---CCCcCHHHHHHHHHHHHHHHhcCCC--CC----------EEEeCccHHHHHHH
Confidence 468999999999999998888764 6899999999999999999864211 23 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCcc-----------------------------c
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRFF-----------------------------Y 202 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~~-----------------------------~ 202 (297)
++|+...+.. ..++.++++|+|++||.|+|+++.++...++.. +..|. .
T Consensus 66 ~~i~~~~~~~-~~~~~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 144 (228)
T PRK14119 66 HYILTESKQQ-WIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKR 144 (228)
T ss_pred HHHHHhcccC-CCCeeECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccc
Confidence 9998754321 135888999999999999999999987766543 11111 1
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEE
Q 022461 203 RFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIV 282 (297)
Q Consensus 203 ~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~ 282 (297)
.+|+|||+.++..|+..++++++... ..++++|||||||++|+++++++++++.+.+..+ .++||++++
T Consensus 145 ~~p~GES~~~~~~Rv~~~l~~~~~~~----------~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~-~~~~~~~~~ 213 (228)
T PRK14119 145 MMPYSESLKDTLVRVIPFWTDHISQY----------LLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINY-EIKTGAPLV 213 (228)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHhh----------ccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhc-CCCCCceEE
Confidence 35899999999999999999987531 1256789999999999999999999999988887 799999999
Q ss_pred EEecCC
Q 022461 283 MEKGYG 288 (297)
Q Consensus 283 l~~~~~ 288 (297)
++++++
T Consensus 214 ~~~~~~ 219 (228)
T PRK14119 214 YELTDD 219 (228)
T ss_pred EEECCC
Confidence 999855
No 5
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.1e-37 Score=270.66 Aligned_cols=189 Identities=23% Similarity=0.282 Sum_probs=158.9
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++||||||||+.+|..+.++|.. |.+||+.|++||+.+++.|+...+ + .|||||+.||+|||
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~---d~~Lt~~G~~qA~~~~~~l~~~~~----~----------~I~sSpl~Ra~qTA 63 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQS---DSPLTAKGEQQAMQVAERAKELGI----T----------HIISSDLGRTRRTA 63 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCC---CCCcCHHHHHHHHHHHHHHhcCCC----C----------EEEECCcHHHHHHH
Confidence 579999999999999988777653 689999999999999999976543 3 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhh-----cCccccCCCCCCHHHHHHHHHHHHHHHHhh
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLY-----GRFFYRFPNGESAADVYDRITGFRETLRAD 227 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~-----~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~ 227 (297)
++|+..++. ++.++++|+|+++|.|+|++..++........ ....+.+|+|||+.++..|+..+++++..
T Consensus 64 ~~i~~~~~~----~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~- 138 (215)
T PRK03482 64 EIIAQACGC----DIIFDPRLRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLE- 138 (215)
T ss_pred HHHHHhcCC----CeeEChhccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHH-
Confidence 999988774 58999999999999999999887754332111 12235578999999999999999999876
Q ss_pred hcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCC----CeEEEee
Q 022461 228 IDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYG----GRYSIFI 295 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~----g~~~l~~ 295 (297)
..++++|||||||++|+++++++++.+.+.+..+ .+.||++++|+++.+ +.|.+..
T Consensus 139 -----------~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~~~~-~~~n~sis~~~~~~~~~~~~~~~~~~ 198 (215)
T PRK03482 139 -----------LPQGSRPLLVSHGIALGCLVSTILGLPAWAERRL-RLRNCSISRVDYQESPWLASGWVVET 198 (215)
T ss_pred -----------hCCCCeEEEEeCcHHHHHHHHHHhCCChhhhhcc-CCCCcEEEEEEEeCCccccceEEEEe
Confidence 2456789999999999999999999999887777 799999999999753 4677654
No 6
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=9.2e-38 Score=268.51 Aligned_cols=186 Identities=23% Similarity=0.339 Sum_probs=156.3
Q ss_pred CCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHH
Q 022461 71 PRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQ 150 (297)
Q Consensus 71 ~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~q 150 (297)
.++++||||||||+.+|..++++|.. |.|||+.|++||+.+++.|+...+ +.. .|||||+.||+|
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G~~---d~pLt~~G~~QA~~l~~~l~~~~~----~~~--------~i~sSpl~Ra~q 67 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTGRT---ELELTETGRTQAELAGQALGELEL----DDP--------LVISSPRRRALD 67 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccCCC---CCCCCHHHHHHHHHHHHHHHhCCC----CCC--------EEEECchHHHHH
Confidence 57899999999999999988877754 689999999999999999976543 221 699999999999
Q ss_pred HHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcC
Q 022461 151 TLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDH 230 (297)
Q Consensus 151 TA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~ 230 (297)
||+++ ++. .+.+++.|+|+++|.|+|++..++...++. |..|....|+|||+.++..|+..+++++..
T Consensus 68 TA~~i--~~~-----~~~~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~~~~~p~gES~~~~~~Rv~~~l~~i~~---- 135 (203)
T PRK13462 68 TAKLA--GLT-----VDEVSGLLAEWDYGSYEGLTTPQIRESEPD-WLVWTHGCPGGESVAQVNERADRAVALALE---- 135 (203)
T ss_pred HHHHh--cCc-----ccccCccccccCCccccCCcHHHHHHhCch-HHhhcCCCCCCccHHHHHHHHHHHHHHHHH----
Confidence 99987 211 236789999999999999999998776554 334555668999999999999999999976
Q ss_pred CCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEE
Q 022461 231 GRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSI 293 (297)
Q Consensus 231 ~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l 293 (297)
..++++|+|||||++|+++++++++.+++.+..+ .++||+++++++.+ +.+.+
T Consensus 136 --------~~~~~~vliVsHg~vir~ll~~~l~~~~~~~~~~-~~~~~s~s~~~~~~-~~~~~ 188 (203)
T PRK13462 136 --------HMESRDVVFVSHGHFSRAVITRWVELPLAEGSRF-AMPTASIAICGFEH-GVRQL 188 (203)
T ss_pred --------hCCCCCEEEEeCCHHHHHHHHHHhCCCHHHhhhc-ccCCceEEEEEeeC-CceEE
Confidence 3456789999999999999999999999888777 89999999999964 44444
No 7
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.5e-37 Score=272.08 Aligned_cols=190 Identities=19% Similarity=0.227 Sum_probs=155.6
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++||||||||+.+|..++++|+. |.|||+.|++||+.+++.|+..... ++ .|||||+.||+|||
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~---D~~Lt~~G~~qa~~~~~~l~~~~~~--~~----------~i~sSpl~Ra~~TA 65 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWA---DVDLSEKGTQQAIDAGKLIKEAGIE--FD----------LAFTSVLKRAIKTT 65 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCC---CCCcCHHHHHHHHHHHHHHHHcCCC--CC----------EEEECCcHHHHHHH
Confidence 578999999999999998888764 6889999999999999999853211 23 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhh-cCc-----------------------------cc
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLY-GRF-----------------------------FY 202 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~-~~~-----------------------------~~ 202 (297)
++++..... ...++.++++|+|+++|.|+|++..++...++..+ ..| ..
T Consensus 66 ~~i~~~~~~-~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (230)
T PRK14117 66 NLALEASDQ-LWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDS 144 (230)
T ss_pred HHHHHhccc-CCCCceeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccC
Confidence 998753321 11358889999999999999999999877665431 111 12
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEE
Q 022461 203 RFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIV 282 (297)
Q Consensus 203 ~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~ 282 (297)
.+|+|||..++.+|+..++++++.. ....+++|+|||||++|+++++++++++...+..+ .++||++++
T Consensus 145 ~~p~GEs~~~~~~Rv~~~l~~~~~~----------~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~-~~~n~s~~~ 213 (230)
T PRK14117 145 VIPDAENLKVTLERALPFWEDKIAP----------ALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDV-EIPNFPPLV 213 (230)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHh----------hccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhc-CCCCceEEE
Confidence 5689999999999999999997631 12235789999999999999999999999988887 799999999
Q ss_pred EEecCCC
Q 022461 283 MEKGYGG 289 (297)
Q Consensus 283 l~~~~~g 289 (297)
+++++++
T Consensus 214 i~~~~~~ 220 (230)
T PRK14117 214 FEFDEKL 220 (230)
T ss_pred EEECCCC
Confidence 9996543
No 8
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4e-37 Score=271.83 Aligned_cols=193 Identities=24% Similarity=0.282 Sum_probs=158.2
Q ss_pred CCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHH
Q 022461 71 PRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQ 150 (297)
Q Consensus 71 ~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~q 150 (297)
++|++||||||||+.+|..+.++|.. |.+||+.|++||+.+++.|+..... ++ .|||||+.||+|
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~---D~pLTe~G~~QA~~~a~~l~~~~~~--~~----------~IysSpl~Ra~q 66 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWV---DVDLTEKGEAEAKRGGELLAEAGVL--PD----------VVYTSLLRRAIR 66 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCC---CCCcCHHHHHHHHHHHHHHHhcCCC--CC----------EEEecChHHHHH
Confidence 56789999999999999988877754 6899999999999999999864221 23 999999999999
Q ss_pred HHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCcc---------------------------c
Q 022461 151 TLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRFF---------------------------Y 202 (297)
Q Consensus 151 TA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~~---------------------------~ 202 (297)
||+++++..+.. ..++.+++.|+|++||.|+|++..++...++.. +..|. .
T Consensus 67 TA~~i~~~~~~~-~~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~ 145 (249)
T PRK14120 67 TANLALDAADRL-WIPVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLG 145 (249)
T ss_pred HHHHHHHhcccC-CCCeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccC
Confidence 999998654321 136889999999999999999999987765542 22111 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHH-hhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEE
Q 022461 203 RFPNGESAADVYDRITGFRETLR-ADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGII 281 (297)
Q Consensus 203 ~~p~gEs~~~~~~R~~~~l~~l~-~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~ 281 (297)
.+|+|||+.++..|+..+++++. .. ..++++|||||||++|+++++++++++.+.+..+ .++||+++
T Consensus 146 ~~p~GES~~~~~~Rv~~~l~~~~~~~-----------~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~-~i~~~~~~ 213 (249)
T PRK14120 146 VGPRTECLKDVVARFLPYWEDDIVPD-----------LKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGL-NIPTGIPL 213 (249)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH-----------hhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhhee-ccCCCceE
Confidence 14899999999999999999853 31 2356789999999999999999999999999988 89999999
Q ss_pred EEEecCCCeE
Q 022461 282 VMEKGYGGRY 291 (297)
Q Consensus 282 ~l~~~~~g~~ 291 (297)
+|++++++.+
T Consensus 214 ~~~~~~~~~~ 223 (249)
T PRK14120 214 VYELDEDFKP 223 (249)
T ss_pred EEEECCCCcE
Confidence 9999866544
No 9
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=3.6e-37 Score=265.31 Aligned_cols=191 Identities=23% Similarity=0.281 Sum_probs=157.5
Q ss_pred EEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHH
Q 022461 75 RIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQF 154 (297)
Q Consensus 75 ~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~ 154 (297)
+||||||||+.+|..+.++|+.+ |.|||+.|++||+.++++|+...+ + .|||||+.||+|||++
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~--d~~Lt~~G~~qa~~l~~~l~~~~~----~----------~i~sSpl~Ra~qTA~~ 64 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTP--GVDLDERGREQAAALAERLADLPI----A----------AIVSSPLERCRETAEP 64 (204)
T ss_pred CEEEEeCCCCCccccccccCCCC--CCCcCHHHHHHHHHHHHHHhcCCC----C----------EEEeCcHHHHHHHHHH
Confidence 48999999999999888888653 478999999999999999986433 3 9999999999999999
Q ss_pred HHHhccccccccceecCCCcCcCCccCCCCChHHHHHH-HHHhhc--CccccCCCCCCHHHHHHHHHHHHHHHHhhhcCC
Q 022461 155 LGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKA-VRLLYG--RFFYRFPNGESAADVYDRITGFRETLRADIDHG 231 (297)
Q Consensus 155 i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~-~~~~~~--~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~ 231 (297)
++..++. ++.+++.|+|+++|.|+|+++.++... ....|. .....+|+|||+.++..|+..+++++.+.+..
T Consensus 65 i~~~~~~----~~~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~~~~- 139 (204)
T TIGR03848 65 IAEARGL----PPRVDERLGECDYGDWTGRELKELAKEPLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDARLAA- 139 (204)
T ss_pred HHHhcCC----CceECcccccCCCCeeCCcCHHHHhCcHHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHhhh-
Confidence 9987764 689999999999999999999887542 111221 12346789999999999999999998763210
Q ss_pred CCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 232 RFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 232 ~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
...++++|+|||||++|+++++.++|.+.+.+..+ .++||+++++++.+ +.+.+.
T Consensus 140 ------~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~~~~-~~~n~sit~l~~~~-~~~~~~ 194 (204)
T TIGR03848 140 ------EHGPDAVWVACSHGDVIKSVLADALGMHLDLFQRI-VVDPCSVSVVRYTP-LRPFVL 194 (204)
T ss_pred ------ccCCCCEEEEEeCChHHHHHHHHHhCCCHHHhhee-eeCCCeEEEEEEeC-CceEEE
Confidence 01246789999999999999999999999988887 89999999999964 556654
No 10
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.2e-37 Score=267.82 Aligned_cols=188 Identities=19% Similarity=0.234 Sum_probs=155.2
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
++||||||||+.+|..++++|+. |.|||+.|++||+.+++.|+..... ++ .|||||+.||+|||+
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~---d~~Lt~~G~~qa~~~~~~l~~~~~~--~d----------~i~sSpl~Ra~~TA~ 65 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWR---DVNLTERGVEEAKAAGKKLKEAGYE--FD----------IAFTSVLTRAIKTCN 65 (227)
T ss_pred CEEEEEecCCCccccccCcCCCC---CCCCCHHHHHHHHHHHHHHHhcCCC--CC----------EEEEeChHHHHHHHH
Confidence 47999999999999998888764 6899999999999999999863211 23 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCc-----------------------------ccc
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRF-----------------------------FYR 203 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~-----------------------------~~~ 203 (297)
+|+...+.. ..++.++++|+|++||.|+|++.+++...++.. +..| ...
T Consensus 66 ~i~~~~~~~-~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (227)
T PRK14118 66 IVLEESNQL-WIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADV 144 (227)
T ss_pred HHHHhcCCC-CCCeecCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCC
Confidence 998765321 135788899999999999999999987766543 1111 124
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEE
Q 022461 204 FPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVM 283 (297)
Q Consensus 204 ~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l 283 (297)
+|+|||+.++..|+..++++++... ..++++|||||||++|+++++++++.+...+..+ .++||+++++
T Consensus 145 ~p~GEs~~~~~~Rv~~~l~~~~~~~----------~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~-~i~~~s~~~~ 213 (227)
T PRK14118 145 VPDAENLKVTLERVLPFWEDQIAPA----------LLSGKRVLVAAHGNSLRALAKHIEGISDADIMDL-EIPTGQPLVY 213 (227)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhh----------hcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcc-cCCCCceEEE
Confidence 6899999999999999999987521 1356789999999999999999999999988877 7999999999
Q ss_pred EecCC
Q 022461 284 EKGYG 288 (297)
Q Consensus 284 ~~~~~ 288 (297)
+++++
T Consensus 214 ~~~~~ 218 (227)
T PRK14118 214 KLDDN 218 (227)
T ss_pred EECCC
Confidence 99754
No 11
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.2e-36 Score=262.13 Aligned_cols=192 Identities=23% Similarity=0.286 Sum_probs=158.9
Q ss_pred CCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHH
Q 022461 72 RPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQT 151 (297)
Q Consensus 72 ~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qT 151 (297)
|+++||||||||+.+|..+.++|.. |.|||+.|++||++++++|+..... ++ .|||||+.||+||
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~~---d~~Lt~~G~~qA~~~~~~L~~~~~~--~d----------~i~sSpl~Ra~qT 65 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGWR---DPDLTEQGVAEAKAAGRKLKAAGLK--FD----------IAFTSALSRAQHT 65 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCCC---CCCcCHHHHHHHHHHHHHHHhCCCC--CC----------EEEeCCcHHHHHH
Confidence 5689999999999999988776643 5789999999999999999863221 23 9999999999999
Q ss_pred HHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhc-----CccccCCCCCCHHHHHHHHHHHH-HHHH
Q 022461 152 LQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYG-----RFFYRFPNGESAADVYDRITGFR-ETLR 225 (297)
Q Consensus 152 A~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~-----~~~~~~p~gEs~~~~~~R~~~~l-~~l~ 225 (297)
|++|++.++.. ..++.+++.|+|+++|.|+|++..++...++..+. .+.+.+|+|||+.++..|+..++ +.+.
T Consensus 66 A~~i~~~~~~~-~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~ 144 (206)
T PRK01295 66 CQLILEELGQP-GLETIRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEIL 144 (206)
T ss_pred HHHHHHHcCCC-CCCeEECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999887632 13688999999999999999999998777654322 23467899999999999999975 5665
Q ss_pred hhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeE
Q 022461 226 ADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRY 291 (297)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~ 291 (297)
.. ...+++|||||||++|+++++++++++.+.+..+ .+.||.++++.++..+.+
T Consensus 145 ~~-----------~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 198 (206)
T PRK01295 145 PR-----------VLRGERVLVAAHGNSLRALVMVLDGLTPEQILKL-ELATGVPIVYRLNADSTV 198 (206)
T ss_pred Hh-----------ccCCCeEEEEcChHHHHHHHHHHhCCCHHHHhhc-CCCCCCcEEEEecCCCCc
Confidence 42 2346789999999999999999999999998888 899999999998765543
No 12
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=7.5e-37 Score=267.12 Aligned_cols=191 Identities=24% Similarity=0.323 Sum_probs=157.7
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++||||||||+.+|..+.++|+. |.+||+.|++||++++++|+...+ + .|||||+.||+|||
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~---D~~Lte~G~~Qa~~l~~~L~~~~~----d----------~iysSpl~Ra~qTA 63 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWV---DIPLSQQGIAEAIAAGEKIKDLPI----D----------CIFTSTLVRSLMTA 63 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCC---CCCcCHHHHHHHHHHHHHhhcCCC----C----------EEEEcCcHHHHHHH
Confidence 578999999999999988777654 688999999999999999987433 3 99999999999999
Q ss_pred HHHHHhccc-------------------------cccccceecCCCcCcCCccCCCCChHHHHHHHHHhh----c-Cccc
Q 022461 153 QFLGRAFER-------------------------SRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLY----G-RFFY 202 (297)
Q Consensus 153 ~~i~~~~~~-------------------------~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~----~-~~~~ 202 (297)
++++..+.. ....++...+.|+|+++|.|+|+++.++.+.++..+ . .+..
T Consensus 64 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~ 143 (228)
T PRK01112 64 LLAMTNHSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKT 143 (228)
T ss_pred HHHHHhhcccccccccccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCC
Confidence 999853320 112357889999999999999999999877664432 2 2345
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEE
Q 022461 203 RFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIV 282 (297)
Q Consensus 203 ~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~ 282 (297)
.+|+|||+.++..|+..+++++.... ..++++|+|||||++|+++++.+++++.+.+..+ .++||++++
T Consensus 144 ~~p~GES~~d~~~Rv~~~l~~~~~~~----------~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~-~~~~~~~~~ 212 (228)
T PRK01112 144 APPQGESLEDTGQRTLPYFQNRILPH----------LQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSL-ELPTGKPIV 212 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH----------hcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhc-ccCCcceEE
Confidence 78999999999999999999765321 1246799999999999999999999999998888 899999999
Q ss_pred EEecCCCeEE
Q 022461 283 MEKGYGGRYS 292 (297)
Q Consensus 283 l~~~~~g~~~ 292 (297)
++++ ++++.
T Consensus 213 ~~~~-~~~~~ 221 (228)
T PRK01112 213 YEWT-GQKFE 221 (228)
T ss_pred EEEC-CCCcc
Confidence 9996 55444
No 13
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=3.4e-36 Score=265.58 Aligned_cols=190 Identities=24% Similarity=0.275 Sum_probs=156.6
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
++||||||||+.+|..++++|+. |.+||+.|++||+.++++|+..... ++ .|||||+.||+|||+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~---D~~Lt~~G~~QA~~la~~L~~~~~~--~d----------~iysSpl~Ra~qTA~ 65 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWV---DVKLSEKGQQEAKRAGELLKEEGYE--FD----------VAYTSLLKRAIHTLN 65 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCC---CCCcCHHHHHHHHHHHHHHHhcCCC--CC----------EEEEcChHHHHHHHH
Confidence 47999999999999988887754 6899999999999999999864321 23 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCcc-----------------------------cc
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRFF-----------------------------YR 203 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~~-----------------------------~~ 203 (297)
+|+..++... .++.+++.|+|+++|.|+|++++++...++.. +..|. ..
T Consensus 66 ii~~~~~~~~-~~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~ 144 (245)
T TIGR01258 66 IALDELDQLW-IPVKKSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKV 144 (245)
T ss_pred HHHHhcCCCC-CCeeeCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCccc
Confidence 9998775321 25788999999999999999999987766543 11110 12
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEE
Q 022461 204 FPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVM 283 (297)
Q Consensus 204 ~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l 283 (297)
+|+|||+.++..|+..+|+++... ...++++|||||||++|+++++++++++...+..+ .++||+++++
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~l~~~----------~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~-~~~~~~~~~~ 213 (245)
T TIGR01258 145 LPLTESLKDTIARVLPYWNDEIAP----------DLLSGKRVLIVAHGNSLRALVKHLEGISDEEILEL-NIPTGIPLVY 213 (245)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhh----------hhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhhe-ecCCCceEEE
Confidence 689999999999999999998752 11356789999999999999999999999988877 7999999999
Q ss_pred EecCCCe
Q 022461 284 EKGYGGR 290 (297)
Q Consensus 284 ~~~~~g~ 290 (297)
+++++.+
T Consensus 214 ~~~~~~~ 220 (245)
T TIGR01258 214 ELDENLK 220 (245)
T ss_pred EECCCCC
Confidence 9976544
No 14
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=1.6e-36 Score=255.34 Aligned_cols=172 Identities=30% Similarity=0.487 Sum_probs=147.9
Q ss_pred EEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHHH
Q 022461 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQFL 155 (297)
Q Consensus 76 i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~i 155 (297)
||||||||+.+|..+.+ |. .|.+||+.|++||+.+++.|+.... + .|||||+.||+|||+++
T Consensus 1 i~lvRHg~t~~n~~~~~-g~---~d~~Lt~~G~~qa~~l~~~l~~~~~----~----------~i~sSpl~Ra~qTA~~i 62 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQ---TDVPLAEKGAEQAAALREKLADVPF----D----------AVYSSPLSRCRELAEIL 62 (177)
T ss_pred CEEEeCCCCccCCCcee-CC---CCCCcChhHHHHHHHHHHHhcCCCC----C----------EEEECchHHHHHHHHHH
Confidence 68999999999998765 54 2689999999999999999975433 3 99999999999999999
Q ss_pred HHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCc-----cccCCCCCCHHHHHHHHHHHHHHHHhhhcC
Q 022461 156 GRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRF-----FYRFPNGESAADVYDRITGFRETLRADIDH 230 (297)
Q Consensus 156 ~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~-----~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~ 230 (297)
+..++. ++.+++.|+|+++|.|+|++..++.+.++ .+..| ...+|+|||..++..|+..+++++.+
T Consensus 63 ~~~~~~----~~~~~~~L~E~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~---- 133 (177)
T TIGR03162 63 AERRGL----PIIKDPRLREMDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPPGGESFADFYQRVSEFLEELLK---- 133 (177)
T ss_pred HhhcCC----CceECCccccccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHH----
Confidence 987764 58999999999999999999988876544 23222 24678999999999999999999987
Q ss_pred CCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEE
Q 022461 231 GRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVM 283 (297)
Q Consensus 231 ~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l 283 (297)
..++++|+|||||++|++++++++|.+++.++.+ .++||+++++
T Consensus 134 --------~~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~~~~-~~~n~~i~~l 177 (177)
T TIGR03162 134 --------AHEGDNVLIVTHGGVIRALLAHLLGLPLEQWWSF-DVEYGSITLI 177 (177)
T ss_pred --------hCCCCeEEEEECHHHHHHHHHHHhCCCHHHHhcc-ccCCeeEEeC
Confidence 2356789999999999999999999999988887 8999999874
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.8e-36 Score=263.23 Aligned_cols=189 Identities=22% Similarity=0.269 Sum_probs=156.4
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
|+||||||||+.+|..++++|+. |.|||+.|++||+.+++.|+..... ++ .|||||+.||+|||+
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~---D~pLte~G~~QA~~la~~L~~~~~~--~d----------~IysSpl~Ra~qTA~ 65 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWT---DVDLSEKGVSEAKAAGKLLKEEGYT--FD----------VAYTSVLKRAIRTLW 65 (247)
T ss_pred CEEEEEECCCcccccccCcCCCC---CCCcCHHHHHHHHHHHHHHHhcCCC--CC----------EEEEcCCHHHHHHHH
Confidence 47999999999999988877754 6899999999999999999864321 23 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh-hcCc-----------------------------ccc
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL-YGRF-----------------------------FYR 203 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~-~~~~-----------------------------~~~ 203 (297)
+|+..++... .++.+++.|+|++||.|+|+++.++...++.. +..| ...
T Consensus 66 ~i~~~~~~~~-~~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (247)
T PRK14115 66 IVLDELDQMW-LPVEKSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEE 144 (247)
T ss_pred HHHHHcCCCC-CCceECccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCC
Confidence 9998776321 25789999999999999999999987665432 1111 123
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEE
Q 022461 204 FPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVM 283 (297)
Q Consensus 204 ~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l 283 (297)
+|+|||+.++..|+..+|++++... ..++++|||||||++|+++++++++++.+.+..+ .++||++++|
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~~i~~~----------~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~-~~~~~~~~~l 213 (247)
T PRK14115 145 LPLTESLKDTIARVLPYWNETIAPQ----------LKSGKRVLIAAHGNSLRALVKYLDNISDEEILEL-NIPTGVPLVY 213 (247)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHH----------hcCCCeEEEEeChHHHHHHHHHHhCCCHHHhhee-ecCCCceEEE
Confidence 6899999999999999999876420 2356789999999999999999999999888887 8999999999
Q ss_pred EecCCC
Q 022461 284 EKGYGG 289 (297)
Q Consensus 284 ~~~~~g 289 (297)
+++++.
T Consensus 214 ~~~~~~ 219 (247)
T PRK14115 214 ELDENL 219 (247)
T ss_pred EECCCC
Confidence 998664
No 16
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=1e-35 Score=256.77 Aligned_cols=186 Identities=30% Similarity=0.373 Sum_probs=161.0
Q ss_pred CCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHH
Q 022461 72 RPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQT 151 (297)
Q Consensus 72 ~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qT 151 (297)
++++||||||||+.+|..++++| +. |.|||+.|++||+.+++.|...... ++ .||+||+.||+||
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G-~~--d~pLt~~G~~QA~~l~~~l~~~~~~--~~----------~i~sS~l~Ra~~T 65 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQG-WT--DSPLTEEGRAQAEALAERLAARDIG--FD----------AIYSSPLKRAQQT 65 (208)
T ss_pred CceEEEEEecCCccccccccccC-CC--CCCCCHHHHHHHHHHHHHHhhcCCC--CC----------EEEECchHHHHHH
Confidence 47899999999999999999888 43 5799999999999999999954221 13 8999999999999
Q ss_pred HHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCc-----cccCCCCCCHHHHHHHHHHHHHHHHh
Q 022461 152 LQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRF-----FYRFPNGESAADVYDRITGFRETLRA 226 (297)
Q Consensus 152 A~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~-----~~~~p~gEs~~~~~~R~~~~l~~l~~ 226 (297)
|+++++.++. ++.+++.|+|+++|.|+|++..++.+.++..+..| .+.+++|||+.++..|+..+++++..
T Consensus 66 A~~~a~~~~~----~~~~~~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~ 141 (208)
T COG0406 66 AEPLAEELGL----PLEVDDRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLR 141 (208)
T ss_pred HHHHHHhcCC----CceecCCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999986 38999999999999999999999988877665443 35667799999999999999999998
Q ss_pred hhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCC
Q 022461 227 DIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGG 289 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g 289 (297)
. ..+++|+|||||++|+++++++++.+......+ .++||+++++++++++
T Consensus 142 ~------------~~~~~vlvVsHg~~ir~l~~~~~~~~~~~~~~~-~~~~~si~~l~~~~~~ 191 (208)
T COG0406 142 S------------PPGNNVLVVSHGGVIRALLAYLLGLDLEELWRL-RLDNASVTVLEFDDGR 191 (208)
T ss_pred h------------cCCCeEEEEEChHHHHHHHHHhcCCChhhHHhc-CCCCceEEEEEeeCCC
Confidence 3 334489999999999999999999988755666 8999999999998664
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=4.5e-35 Score=273.98 Aligned_cols=192 Identities=24% Similarity=0.254 Sum_probs=165.8
Q ss_pred CCCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhh-hhhcCCCCCCCCCCCeeEEEEcCcHHH
Q 022461 70 PPRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQM-IEQNDGDGAELDDDWQVYFYVSPYTRT 148 (297)
Q Consensus 70 ~~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~-~~~~~~~~~~~~~~~~~~i~sSPl~Ra 148 (297)
..++++||||||||+.+|..++++|.. |.+||+.|++||+.+++.|+.. .+ + .|||||+.||
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~---D~~Lt~~G~~QA~~l~~~l~~~~~~----d----------~i~sSpl~Ra 230 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRG---NPELTEVGRRQAAAAARYLAARGGI----D----------AVVSSPLQRA 230 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCC---CCCcCHHHHHHHHHHHHHHhccCCC----C----------EEEECChHHH
Confidence 346789999999999999988877654 6889999999999999999865 22 3 9999999999
Q ss_pred HHHHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCc----cccCCCCCCHHHHHHHHHHHHHHH
Q 022461 149 LQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRF----FYRFPNGESAADVYDRITGFRETL 224 (297)
Q Consensus 149 ~qTA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~----~~~~p~gEs~~~~~~R~~~~l~~l 224 (297)
+|||++++..++. ++.+++.|+|+++|.|+|++..++...++..+..| .+.+|+|||+.++..|+..++++|
T Consensus 231 ~qTA~~i~~~~~~----~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~~~~~p~gEs~~~~~~Rv~~~l~~l 306 (372)
T PRK07238 231 RDTAAAAAKALGL----DVTVDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADTSVAPPGGESFDAVARRVRRARDRL 306 (372)
T ss_pred HHHHHHHHHhcCC----CcEECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCCCCCCcCCCCHHHHHHHHHHHHHHH
Confidence 9999999988774 58899999999999999999999877766655444 356789999999999999999999
Q ss_pred HhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEee
Q 022461 225 RADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIFI 295 (297)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~~ 295 (297)
.. ..++++|+|||||++|+++++.+++.+.+.+..+ .++||+++++++..+|.+.+..
T Consensus 307 ~~------------~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~~~~-~~~~~~~s~l~~~~~~~~~~~~ 364 (372)
T PRK07238 307 IA------------EYPGATVLVVSHVTPIKTLLRLALDAGPGVLYRL-HLDLASLSIAEFYPDGPASVRL 364 (372)
T ss_pred HH------------HCCCCeEEEEEChHHHHHHHHHHhCCCHHHhhhc-ccCCceEEEEEEECCCceEEEE
Confidence 86 3456789999999999999999999999888776 7999999999997677666643
No 18
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.4e-31 Score=227.52 Aligned_cols=192 Identities=28% Similarity=0.365 Sum_probs=166.1
Q ss_pred CCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHH
Q 022461 71 PRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQ 150 (297)
Q Consensus 71 ~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~q 150 (297)
....+++||||||+.||.++.++|+. |.+||+.|.+||+.++++|...... ++ .+|+||+.||.|
T Consensus 3 ~~~~~lvlvRHGes~wN~e~~~~G~~---D~~Lte~G~~qA~~~~~~l~~~~~~--~~----------~~~tS~l~Rakq 67 (214)
T KOG0235|consen 3 SNTFRLVLVRHGESEWNKENIFQGWI---DAPLTEKGEEQAKAAAQRLKDLNIE--FD----------VCYTSDLKRAKQ 67 (214)
T ss_pred CcceEEEEEecCchhhhhhCcccccc---cCccChhhHHHHHHHHHHHHhcCCc--cc----------EEecCHHHHHHH
Confidence 34679999999999999999988876 5689999999999999999988764 23 789999999999
Q ss_pred HHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHh--hcCcc------ccCCCCCCHHHHHHHHHHHHH
Q 022461 151 TLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLL--YGRFF------YRFPNGESAADVYDRITGFRE 222 (297)
Q Consensus 151 TA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~--~~~~~------~~~p~gEs~~~~~~R~~~~l~ 222 (297)
||++|++..+.. ..|+....+|+|++||.++|+++.++.+.+... +.++. ..+|.+||..++..|+..+++
T Consensus 68 T~~~il~~~~~~-~~pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~ 146 (214)
T KOG0235|consen 68 TAELILEELKQK-KVPVLYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWN 146 (214)
T ss_pred HHHHHHHhhccC-CcceEechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHH
Confidence 999999988732 247999999999999999999999999887766 33332 347899999999999999999
Q ss_pred HHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCC
Q 022461 223 TLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGG 289 (297)
Q Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g 289 (297)
+.... +...+++|+||+||..+|+++.++.|...+.+..+ .++++-..+++++.+.
T Consensus 147 e~i~~----------~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~~~-~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 147 EEIAK----------ESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIKEL-NLPTGVPIVYELDKNK 202 (214)
T ss_pred Hhhhh----------hhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhhhe-ecccCCceEEEccccc
Confidence 87764 35678999999999999999999999999998888 8999999999987543
No 19
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.97 E-value=1.1e-30 Score=260.17 Aligned_cols=187 Identities=18% Similarity=0.189 Sum_probs=152.1
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
+++||||||||+.+|..++++| |.|||+.|++||++++++|+..... +.. .|||||+.||+|||
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G-----d~pLt~~G~~qA~~l~~~l~~~~~~---~~~--------~V~sSpl~Ra~~TA 482 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG-----NSRLTERGRAYSRALFEYFQKEIST---TSF--------TVMSSCAKRCTETV 482 (664)
T ss_pred CceEEEEecccchhhhcCccCC-----CCccCHHHHHHHHHHHHHHHhccCC---CCc--------EEEcCCcHHHHHHH
Confidence 4689999999999999988875 4789999999999999999764210 111 89999999999999
Q ss_pred HHHHHhcc-------------ccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCc-----cccCCCCCCHHHHH
Q 022461 153 QFLGRAFE-------------RSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRF-----FYRFPNGESAADVY 214 (297)
Q Consensus 153 ~~i~~~~~-------------~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~-----~~~~p~gEs~~~~~ 214 (297)
+++..... .....++.+++.|+|++||.|+|+++.++.+.+++.|..| .+.+|+|||+.++.
T Consensus 483 ~~i~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P~GES~~d~~ 562 (664)
T PTZ00322 483 HYFAEESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWPNGECIHQVF 562 (664)
T ss_pred HHHHhccccccccccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCCCCcCHHHHH
Confidence 99975310 0012357889999999999999999999988877766544 35789999999966
Q ss_pred -HHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCC-----CHhhhhhcCCcCCccEEEEEecCC
Q 022461 215 -DRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKW-----TVEQFEGLNNLGNGGIIVMEKGYG 288 (297)
Q Consensus 215 -~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~-----~~~~~~~~~~~~n~~i~~l~~~~~ 288 (297)
.|+..+++++.. ..++|+|||||++|+++++++++. ++.....+ .+++++++.++..+.
T Consensus 563 ~~R~~~~i~~l~~--------------~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~ 627 (664)
T PTZ00322 563 NARLEPHIHDIQA--------------STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKI-DIPFEHVIKIRMVGF 627 (664)
T ss_pred HHHHHHHHHHHHc--------------cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCcee-eccCCcEEEEEEecc
Confidence 799999999854 236899999999999999999985 56666666 789999999998755
Q ss_pred Ce
Q 022461 289 GR 290 (297)
Q Consensus 289 g~ 290 (297)
+.
T Consensus 628 ~~ 629 (664)
T PTZ00322 628 NR 629 (664)
T ss_pred Cc
Confidence 43
No 20
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.97 E-value=9.3e-31 Score=215.63 Aligned_cols=154 Identities=32% Similarity=0.418 Sum_probs=126.8
Q ss_pred EEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHH
Q 022461 75 RIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQF 154 (297)
Q Consensus 75 ~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~ 154 (297)
+||||||||+.+|..+.++|. . |.|||+.|++||+++++.|.... ..+++ .|||||+.||+|||++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~-~--d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~----------~i~sSpl~Ra~qTa~~ 66 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGW-T--DSPLTELGRAQAEALGELLASLG-RLRFD----------VIYSSPLLRARETAEA 66 (155)
T ss_pred CEEEEeCCCCcccccCeEcCC-C--CCCCCHHHHHHHHHHHHHHHhcc-CCCCC----------EEEeCchHHHHHHHHH
Confidence 589999999999987776654 3 68999999999999999998642 00112 8999999999999999
Q ss_pred HHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcC-ccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 022461 155 LGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGR-FFYRFPNGESAADVYDRITGFRETLRADIDHGRF 233 (297)
Q Consensus 155 i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~ 233 (297)
++..++.+ .+.+.|+|+++|.|+|++..++...++..+.. +.+.+|+|||+.++..|+..+++++....
T Consensus 67 i~~~~~~~-----~~~~~L~E~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~~~~i~~~~----- 136 (155)
T smart00855 67 LAIALGLG-----EVDPRLRERDYGAWEGLTKEEERAKAWTRPADWLGAAPPGGESLADVVERLVRALEELIATH----- 136 (155)
T ss_pred HHHhcCCC-----CCChhhhhcccceecCCcHHHHHHHHHHHHhccCCCCCcCCCCHHHHHHHHHHHHHHHHHhc-----
Confidence 99887642 37899999999999999998887766665544 44678899999999999999999998631
Q ss_pred CCCCCCCCCCeEEEEechHHHHHH
Q 022461 234 QPPGHRSQNMNIVIVSHGLTLRVF 257 (297)
Q Consensus 234 ~~~~~~~~~~~ilvVsHg~~i~~l 257 (297)
...+++|||||||++|+++
T Consensus 137 -----~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 137 -----DKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred -----ccCCCeEEEEECCcccccC
Confidence 1256789999999999863
No 21
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.97 E-value=3.5e-31 Score=217.50 Aligned_cols=153 Identities=35% Similarity=0.532 Sum_probs=127.0
Q ss_pred EEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHH
Q 022461 75 RIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQF 154 (297)
Q Consensus 75 ~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~ 154 (297)
+||||||||+.+|..+.+.+.. |.+||+.|+.||+.+++.|...... ++ .||+||+.||+|||++
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~---d~~Lt~~G~~qA~~~~~~l~~~~~~--~~----------~i~~Sp~~R~~qTA~~ 65 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDS---DPPLTERGREQARQLGEYLAERDIQ--ID----------VIYSSPLRRCIQTAEI 65 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTS---STGBEHHHHHHHHHHHHHHHHTTSS--CS----------EEEEESSHHHHHHHHH
T ss_pred CEEEEECCccccccCCCcCCCC---CccccHHHHHHHHhhcccccccccC--ce----------EEecCCcchhhhhhch
Confidence 6999999999999877766654 3589999999999999999853322 12 8999999999999999
Q ss_pred HHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhc-----CccccCCCCCCHHHHHHHHHHHHHHHHhhhc
Q 022461 155 LGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYG-----RFFYRFPNGESAADVYDRITGFRETLRADID 229 (297)
Q Consensus 155 i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~-----~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~ 229 (297)
+++.++. ++.+++.|+|+++|.|+|.+..++...++..+. .+.+.+|++||..++..|+..++++|...
T Consensus 66 ~~~~~~~----~~~~~~~l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-- 139 (158)
T PF00300_consen 66 IAEGLGI----EIIVDPRLREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIAY-- 139 (158)
T ss_dssp HHHHHTS----EEEEEGGGSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHHH--
T ss_pred hhccccc----ccccccccccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHHH--
Confidence 9998774 699999999999999999999999887764443 34467789999999999999999999951
Q ss_pred CCCCCCCCCCCCCCeEEEEechHHHHHH
Q 022461 230 HGRFQPPGHRSQNMNIVIVSHGLTLRVF 257 (297)
Q Consensus 230 ~~~~~~~~~~~~~~~ilvVsHg~~i~~l 257 (297)
..++++|+|||||++|++|
T Consensus 140 ---------~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 140 ---------KRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp ---------HHTTSEEEEEE-HHHHHHH
T ss_pred ---------hCCCCEEEEEecHHHHHhC
Confidence 2568899999999999975
No 22
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=8.3e-30 Score=224.04 Aligned_cols=176 Identities=20% Similarity=0.245 Sum_probs=143.3
Q ss_pred CCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHHHHHhccccccc
Q 022461 86 GNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQFLGRAFERSRIA 165 (297)
Q Consensus 86 ~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~i~~~~~~~~~~ 165 (297)
+|..++++|+. |.|||+.|++||+++++.|+..... ++ .|||||+.||+|||+++++.++.. ..
T Consensus 1 ~N~~~~~qG~~---D~pLTe~G~~QA~~l~~~L~~~~~~--~d----------~iysSpl~Ra~qTA~~i~~~~~~~-~~ 64 (236)
T PTZ00123 1 WNKENRFTGWT---DVPLSEKGVQEAREAGKLLKEKGFR--FD----------VVYTSVLKRAIKTAWIVLEELGQL-HV 64 (236)
T ss_pred CcccCceeCCC---CCCCCHHHHHHHHHHHHHHHhcCCC--CC----------EEEECChHHHHHHHHHHHHhcCCC-CC
Confidence 57777877764 6899999999999999999854321 23 999999999999999999877532 12
Q ss_pred cceecCCCcCcCCccCCCCChHHHHHHHHHhh----c-Cc-------------------------cccCCCCCCHHHHHH
Q 022461 166 GMTKEPRLREQDFGNFQDRERMRVEKAVRLLY----G-RF-------------------------FYRFPNGESAADVYD 215 (297)
Q Consensus 166 ~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~----~-~~-------------------------~~~~p~gEs~~~~~~ 215 (297)
++.+++.|+|+++|.|+|+++.++...++..+ . .+ ...+|+|||+.++..
T Consensus 65 ~~~~~~~L~E~~~G~~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~ 144 (236)
T PTZ00123 65 PVIKSWRLNERHYGALQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVE 144 (236)
T ss_pred CceeCchhhhcccccccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHH
Confidence 57889999999999999999999876654431 1 10 123579999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCC
Q 022461 216 RITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYG 288 (297)
Q Consensus 216 R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~ 288 (297)
|+..++++++.. ....+++|||||||++|+++++++++++.+.+..+ .++||++++|+++++
T Consensus 145 Rv~~~l~~li~~----------~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~~~~-~~~n~~~~~~~~~~~ 206 (236)
T PTZ00123 145 RVLPYWEDHIAP----------DILAGKKVLVAAHGNSLRALVKYLDKMSEEDILEL-NIPTGVPLVYELDEN 206 (236)
T ss_pred HHHHHHHHHHHH----------HhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhc-cCCCCceEEEEECCC
Confidence 999999997642 12356799999999999999999999999988877 899999999999754
No 23
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.9e-30 Score=212.56 Aligned_cols=193 Identities=24% Similarity=0.262 Sum_probs=163.0
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|+.++|+||||++||..+.+.|+. |.+||+.|.+||...|+.|++.... +| .+|+|-+.||++|+
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~---Dv~LtekG~~EA~~ag~llk~~~~~--~d----------ia~TS~L~RAi~T~ 65 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWV---DVDLTEKGISEAKAAGKLLKEEGLE--FD----------IAYTSVLKRAIKTL 65 (230)
T ss_pred CceEEEEecCchhhhhcCceeeee---ecCcchhhHHHHHHHHHHHHHcCCC--cc----------eeehHHHHHHHHHH
Confidence 468999999999999987766654 6889999999999999999997654 34 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcC-----ccccC-----------------------
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGR-----FFYRF----------------------- 204 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~-----~~~~~----------------------- 204 (297)
.++.+..+... .|+....+|+|.+||.++|++..+..+++..+.-. |...+
T Consensus 66 ~i~L~e~d~~~-ipv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~ 144 (230)
T COG0588 66 NIVLEESDQLW-IPVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIG 144 (230)
T ss_pred HHHhhhhcccC-cchhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCccccccccccccccccccccc
Confidence 99999886543 36788889999999999999999988877654421 22222
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEE
Q 022461 205 --PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIV 282 (297)
Q Consensus 205 --p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~ 282 (297)
|..||..+...|+..+++..+... -..+++|+||+||..+|+|+.++.++.-+++..+ .++||--.+
T Consensus 145 ~~p~~EsLkdt~~Rv~Pyw~~~I~p~----------l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l-~IPtg~Plv 213 (230)
T COG0588 145 GLPLTESLKDTVERVLPYWEDDIAPN----------LKSGKNVLIVAHGNSLRALIKYLEGISDEDILDL-NIPTGIPLV 213 (230)
T ss_pred CCCccchHHHHHHHhhHHHHHHhhHH----------HhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhc-ccCCCCcEE
Confidence 345999999999999998866542 3578999999999999999999999999999999 999999999
Q ss_pred EEecCCCeEE
Q 022461 283 MEKGYGGRYS 292 (297)
Q Consensus 283 l~~~~~g~~~ 292 (297)
++++.+..+.
T Consensus 214 yeld~~l~~~ 223 (230)
T COG0588 214 YELDKNLKVI 223 (230)
T ss_pred EEECCCCcCc
Confidence 9999776543
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.96 E-value=2.3e-28 Score=221.10 Aligned_cols=179 Identities=25% Similarity=0.255 Sum_probs=133.0
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhh----cCCCCCCCCCCCeeEEEEcCcHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQ----NDGDGAELDDDWQVYFYVSPYTRT 148 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~sSPl~Ra 148 (297)
.++||||||||+.++. ..++++.+||+.|++||+.+++.|++.... ..++ .||+|||.||
T Consensus 102 ~~~L~LVRHGq~~~~~------~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d----------~IysSPL~RA 165 (299)
T PTZ00122 102 QRQIILVRHGQYINES------SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVK----------AIYHSDMTRA 165 (299)
T ss_pred eeEEEEEECCCCCCCC------CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCC----------EEEEcCcHHH
Confidence 4899999999965432 233334569999999999999999875221 0123 9999999999
Q ss_pred HHHHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhh
Q 022461 149 LQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADI 228 (297)
Q Consensus 149 ~qTA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~ 228 (297)
+|||++|++.+.. .++.++++|+|.. +..+. + ....+.++++|+ .+...|+.++++++....
T Consensus 166 ~qTAeiIa~~~~~---~~v~~d~~LrEG~-------~~~~~----~---~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~ 227 (299)
T PTZ00122 166 KETAEIISEAFPG---VRLIEDPNLAEGV-------PCAPD----P---PSRGFKPTIEEI-LEDMKRIEAAFEKYFHRP 227 (299)
T ss_pred HHHHHHHHHhCCC---CCceeCcccccCC-------ccccC----c---cccccCCCcchH-HHHHHHHHHHHHHHHHhc
Confidence 9999999987632 3688999999931 11110 0 001233455555 666999999999987631
Q ss_pred cCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEee
Q 022461 229 DHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIFI 295 (297)
Q Consensus 229 ~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~~ 295 (297)
. ...++.+||||||++|+++++.+++++.+.+..+ .++||+++++++.++|.+.+..
T Consensus 228 ~---------~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~~~~-~~~N~sit~l~~~~~g~~~l~~ 284 (299)
T PTZ00122 228 V---------EDEDSVEIIVCHGNVIRYLVCRALQLPPEAWLRL-SLYNCGITWIVISSEGHVSLSG 284 (299)
T ss_pred c---------cCCCCeEEEEeCChHHHHHHHHHhCcCHHHHhhc-cCCCceEEEEEEeCCCcEEEEE
Confidence 0 1134578999999999999999999999888877 7899999999998777777754
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.94 E-value=3.1e-26 Score=187.92 Aligned_cols=149 Identities=36% Similarity=0.474 Sum_probs=123.1
Q ss_pred EEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHH
Q 022461 75 RIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQF 154 (297)
Q Consensus 75 ~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~ 154 (297)
+|||||||++.+|......+ +.|.+||+.|++||+.+++.|...... ++ .|||||+.||+|||++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~---~~d~~Lt~~G~~qa~~~~~~l~~~~~~--~~----------~i~~Sp~~Ra~qTa~~ 65 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQG---WTDVPLTEKGREQARALGKRLKELGIK--FD----------RIYSSPLKRAIQTAEI 65 (153)
T ss_pred CEEEEECCCCcccccCcccC---CCCCCCCHHHHHHHHHHHHHHHhcCCC--CC----------EEEECcHHHHHHHHHH
Confidence 58999999999987654332 347999999999999999999875321 12 9999999999999999
Q ss_pred HHHhc-cccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 022461 155 LGRAF-ERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRF 233 (297)
Q Consensus 155 i~~~~-~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~ 233 (297)
+++.+ + .++.+.+.|+| .|+..+++++...
T Consensus 66 l~~~~~~----~~~~~~~~L~e---------------------------------------~R~~~~~~~l~~~------ 96 (153)
T cd07067 66 ILEELPG----LPVEVDPRLRE---------------------------------------ARVLPALEELIAP------ 96 (153)
T ss_pred HHHhcCC----CCceeCccchH---------------------------------------HHHHHHHHHHHHh------
Confidence 99887 3 35778888888 7899999999862
Q ss_pred CCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 234 QPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 234 ~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
.++++|+||||+++|+.+++++++.+...+..+ .++||++++++++.++.+.+.
T Consensus 97 ------~~~~~iliV~H~~~i~~~~~~l~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~ 150 (153)
T cd07067 97 ------HDGKNVLIVSHGGVLRALLAYLLGLSDEDILRL-NLPNGSISVLELDENGGGVLL 150 (153)
T ss_pred ------CCCCeEEEEeChHHHHHHHHHHhCCCHHHHHhc-CCCCceEEEEEEeCCCcceee
Confidence 356899999999999999999999998887666 899999999999765544443
No 26
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.9e-24 Score=177.47 Aligned_cols=190 Identities=24% Similarity=0.221 Sum_probs=136.3
Q ss_pred CCCCCeEEEEEeCCcCCCCcccc----cccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcC
Q 022461 69 PPPRPRRIILVRHGESEGNVDES----AYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSP 144 (297)
Q Consensus 69 ~~~~~~~i~liRHGe~~~n~~~~----~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSP 144 (297)
+..+.|+||||||||+.||+++. .|-+..-.|+.||++|++|+.++++.+......++++ .|++||
T Consensus 10 t~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ie----------liv~SP 79 (248)
T KOG4754|consen 10 TKNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIE----------LIVVSP 79 (248)
T ss_pred ccCcceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCcee----------EEEech
Confidence 34558999999999999999763 1211122478999999999999999988777664444 999999
Q ss_pred cHHHHHHHHHHHHhcccc---ccccceecCCC----cCcCCccCCCCChHHHHHHHHHhhcC-----------ccccCCC
Q 022461 145 YTRTLQTLQFLGRAFERS---RIAGMTKEPRL----REQDFGNFQDRERMRVEKAVRLLYGR-----------FFYRFPN 206 (297)
Q Consensus 145 l~Ra~qTA~~i~~~~~~~---~~~~v~~~~~L----rE~~~g~~~g~~~~~~~~~~~~~~~~-----------~~~~~p~ 206 (297)
|+||+||+.+.+.+.... ..+++.+.|.+ || ..|.+......++. .+...|+. +.|.+.-
T Consensus 80 MrRtLqT~v~~f~~~~~e~g~~~~p~~vsp~~i~~~rE-~lG~hpCD~r~~v~-~~~~lfp~~DFs~~~~dv~~~~~pdy 157 (248)
T KOG4754|consen 80 MRRTLQTMVIAFGGYLAEDGEDPAPVKVSPPFIAVCRE-TLGDHPCDRRSSVT-DLMKLFPAYDFSLCETDVDPLKKPDY 157 (248)
T ss_pred HHHHHHHHHHHhcceeccCCCcCCceeecchHHHHHHH-HhCCCcccccchhH-HHHhhcccccceeeccCcchhccCcc
Confidence 999999999999887443 23567777777 88 34554432222221 12223322 3355556
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhC-CCHhhhhhcCCcCCccEEEE
Q 022461 207 GESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYK-WTVEQFEGLNNLGNGGIIVM 283 (297)
Q Consensus 207 gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~-~~~~~~~~~~~~~n~~i~~l 283 (297)
.|+.+....|.+++++++.+ .+++.|.||+|+++|+.++..+.. -.++-......+.||..-.|
T Consensus 158 ~ed~e~~a~r~re~~~~l~~-------------r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~~~~~Nce~r~~ 222 (248)
T KOG4754|consen 158 REDDEESAARSREFLEWLAK-------------RPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEILSFSNCEHRSF 222 (248)
T ss_pred hhhHHHHHHhHHHHHHHHHh-------------CccceEEEEEehHHHHHHHHHhccccCcccchhhhccCCCcCCce
Confidence 79999999999999999986 788999999999999999988753 23333333334578876544
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.89 E-value=4.9e-22 Score=162.27 Aligned_cols=143 Identities=33% Similarity=0.407 Sum_probs=112.6
Q ss_pred EEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHH
Q 022461 75 RIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQF 154 (297)
Q Consensus 75 ~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~ 154 (297)
+|+|||||++.++..+..++ +.|.+||+.|++||..+++.|...... ++ .||+||+.||+|||++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~---~~d~~Lt~~G~~qa~~l~~~l~~~~~~--~~----------~v~sSp~~R~~~Ta~~ 65 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTG---WGDGPLTEKGRQQARELGKALRERYIK--FD----------RIYSSPLKRAIQTAEI 65 (153)
T ss_pred CEEEEeCCCCccccCCCccC---CCCCCcCHHHHHHHHHHHHHHHHhCCC--CC----------EEEECChHHHHHHHHH
Confidence 48999999999987654333 347899999999999999999876321 12 9999999999999999
Q ss_pred HHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCC
Q 022461 155 LGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQ 234 (297)
Q Consensus 155 i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~ 234 (297)
++..+... .++...+. .|+..+++++....
T Consensus 66 ~~~~~~~~--~~~~~~~~------------------------------------------~r~~~~~~~~~~~~------ 95 (153)
T cd07040 66 ILEGLFEG--LPVEVDPR------------------------------------------ARVLNALLELLARH------ 95 (153)
T ss_pred HHHHhcCC--CCeEECHH------------------------------------------HHHHHHHHHHHHhh------
Confidence 99886310 12332221 88889999888631
Q ss_pred CCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecC
Q 022461 235 PPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGY 287 (297)
Q Consensus 235 ~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~ 287 (297)
..++++++||||+++|+.+++++.+.+....... .+++|++..+++..
T Consensus 96 ----~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~ 143 (153)
T cd07040 96 ----LLDGKNVLIVSHGGTIRALLAALLGLSDEEILSL-NLPNGSILVLELDE 143 (153)
T ss_pred ----CCCCCEEEEEeCCHHHHHHHHHHhCcCHHHhccc-cCCCCceEEEEEcC
Confidence 1357899999999999999999999888776555 79999999999864
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.87 E-value=5.4e-21 Score=157.02 Aligned_cols=148 Identities=16% Similarity=0.212 Sum_probs=107.3
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
++|||||||++.++.. .|.|.+||+.|++||+.++++|...... ++ .|||||+.||+|||+
T Consensus 1 m~l~LvRHg~a~~~~~-------~d~dr~Lt~~G~~qa~~~~~~l~~~~~~--~d----------~i~sSp~~Ra~qTa~ 61 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA-------SDSVRPLTTNGCDESRLVAQWLKGQGVE--IE----------RILVSPFVRAEQTAE 61 (152)
T ss_pred CEEEEEeCCCcccccC-------CCCCCCcCHHHHHHHHHHHHHHHhCCCC--CC----------EEEECCcHHHHHHHH
Confidence 4799999999998763 3457899999999999999999875321 23 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRF 233 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~ 233 (297)
++++.++.+ ..+...+.|. |+ ++..+ +..+++.+..
T Consensus 62 ~l~~~~~~~--~~~~~~~~l~------------------------------p~-~~~~~----~~~~l~~~~~------- 97 (152)
T TIGR00249 62 IVGDCLNLP--SSAEVLEGLT------------------------------PC-GDIGL----VSDYLEALTN------- 97 (152)
T ss_pred HHHHHcCCC--cceEEccCcC------------------------------CC-CCHHH----HHHHHHHHHh-------
Confidence 999887642 1122222221 21 23332 3344444432
Q ss_pred CCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEee
Q 022461 234 QPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIFI 295 (297)
Q Consensus 234 ~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~~ 295 (297)
...++++||+|+..|..++..+++.+.. . .+++|++..++++.++.+.+..
T Consensus 98 ------~~~~~vliVgH~P~i~~l~~~l~~~~~~----~-~~~~~~~~~l~~~~~~~~~l~w 148 (152)
T TIGR00249 98 ------EGVASVLLVSHLPLVGYLVAELCPGENP----I-MFTTGAIASLLWDESKNGTLNW 148 (152)
T ss_pred ------cCCCEEEEEeCCCCHHHHHHHHhCCCCC----C-cCcceeEEEEEEecCCCeEEEE
Confidence 2357999999999999999999875321 2 6899999999998677777654
No 29
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.87 E-value=2.2e-21 Score=161.75 Aligned_cols=178 Identities=21% Similarity=0.242 Sum_probs=132.6
Q ss_pred CCCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHH
Q 022461 70 PPRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTL 149 (297)
Q Consensus 70 ~~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~ 149 (297)
....+.||||||||...... . ..||++|++||+.+|++|+++... ++ .|+.|.|.||.
T Consensus 91 akatRhI~LiRHgeY~~~g~------~----~hLTelGReQAE~tGkRL~elglk--~d----------~vv~StM~RA~ 148 (284)
T KOG4609|consen 91 AKATRHIFLIRHGEYHVDGS------L----EHLTELGREQAELTGKRLAELGLK--FD----------KVVASTMVRAT 148 (284)
T ss_pred hhhhceEEEEeccceeccCc------h----hhcchhhHHHHHHHhHHHHHcCCc--hh----------hhhhhhhhhhH
Confidence 34678999999999754321 1 369999999999999999998775 34 89999999999
Q ss_pred HHHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhc
Q 022461 150 QTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADID 229 (297)
Q Consensus 150 qTA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~ 229 (297)
+||.+|.+.+... ......+.|+|=. .+++.+.. -.|.+-+- -+..-..|++.++.+.+-.
T Consensus 149 ETadIIlk~l~d~--lk~~s~~ll~EGa--P~ppdPp~------------k~wrp~~~-qy~rdgaRIEaafRryfhR-- 209 (284)
T KOG4609|consen 149 ETADIILKHLPDD--LKRVSCPLLREGA--PYPPDPPV------------KHWRPLDP-QYYRDGARIEAAFRRYFHR-- 209 (284)
T ss_pred HHHHHHHHhCCCc--cceecccccccCC--CCCCCCCc------------ccCCccCh-HhhhcchHHHHHHHHHHhh--
Confidence 9999999998732 3567778888821 11111110 01111111 1112246888887776642
Q ss_pred CCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 230 HGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 230 ~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
+..++..+...+||+|+++|+.|++..+.+|++.+.++ ++.||+|+.+.+.+.|.+++.
T Consensus 210 -----A~p~QeedSy~liV~HaNVIRY~icRALq~PpegWlR~-nlnh~SiTWlti~PsG~vsvr 268 (284)
T KOG4609|consen 210 -----ASPSQEEDSYELIVCHANVIRYFICRALQFPPEGWLRM-NLNHCSITWLTISPSGHVSVR 268 (284)
T ss_pred -----cCcccccccEEEEEeecchhhhhhhhhhcCCcchhhee-cccCcceEEEEEccCCcEEEE
Confidence 33356778899999999999999999999999999999 999999999999999988773
No 30
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.85 E-value=9e-20 Score=150.79 Aligned_cols=147 Identities=17% Similarity=0.239 Sum_probs=102.9
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
++|||||||++.+|.. .|.|.+||+.|++||+.++++|...... ++ .|||||+.||+|||+
T Consensus 1 m~l~lvRHg~a~~~~~-------~d~~rpLt~~G~~qa~~~~~~l~~~~~~--~d----------~i~sSp~~Ra~qTa~ 61 (159)
T PRK10848 1 MQVFIMRHGDAALDAA-------SDSVRPLTTCGCDESRLMANWLKGQKVD--IE----------RVLVSPYLRAEQTLE 61 (159)
T ss_pred CEEEEEeCCCCCCCCC-------CCcCCCcCHHHHHHHHHHHHHHHhCCCC--CC----------EEEECCHHHHHHHHH
Confidence 4799999999988742 3457899999999999999999875331 23 999999999999999
Q ss_pred HHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 022461 154 FLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRF 233 (297)
Q Consensus 154 ~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~ 233 (297)
+++..++.. ..+...+.|.+ + .+. ..+..+++.+..
T Consensus 62 ~l~~~~~~~--~~~~~~~~l~~------------------------------~-~~~----~~~~~~l~~~~~------- 97 (159)
T PRK10848 62 VVGECLNLP--ASAEVLPELTP------------------------------C-GDV----GLVSAYLQALAN------- 97 (159)
T ss_pred HHHHHhCCC--CceEEccCCCC------------------------------C-CCH----HHHHHHHHHHHh-------
Confidence 999877542 12223222221 0 111 123334444432
Q ss_pred CCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 234 QPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 234 ~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
.+.++|+||+|...|..++..+++.... ..+++|++..++++..|.+.+.
T Consensus 98 ------~~~~~vllVgH~P~l~~l~~~L~~~~~~-----~~~~t~~i~~l~~~~~~~~~l~ 147 (159)
T PRK10848 98 ------EGVASVLVISHLPLVGYLVAELCPGETP-----PMFTTSAIACVTLDESGKGTFN 147 (159)
T ss_pred ------cCCCeEEEEeCcCcHHHHHHHHhCCCCC-----CCcCCceEEEEEeccCCCeEEE
Confidence 2356999999999999999998864321 1379999999999755545544
No 31
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3e-20 Score=171.41 Aligned_cols=186 Identities=24% Similarity=0.348 Sum_probs=155.7
Q ss_pred CCCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHH
Q 022461 70 PPRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTL 149 (297)
Q Consensus 70 ~~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~ 149 (297)
...+++|||.||||+..|+.++..| |.+|++.|.+-|+.+.+++...... + ..|++|++.||+
T Consensus 236 ~~~pR~i~l~r~geS~~n~~grigg-----ds~ls~~g~~ya~~l~~f~~~~~~~---d---------l~vwts~~~rti 298 (438)
T KOG0234|consen 236 HTTPRTIYLTRHGESEFNVEGRIGG-----DSPLSERGSQYAKSLIKFVEEQSSS---D---------LDVWTSQRKRTI 298 (438)
T ss_pred ccCCceEEEEecCCCccccccccCC-----cccccHHHHHHHHHHHHHHhhhccc---C---------ceeccchHHHHh
Confidence 5667899999999999999876443 6889999999999999999887554 3 289999999999
Q ss_pred HHHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhc-----CccccCCCCCCHHHHHHHHHHHHHHH
Q 022461 150 QTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYG-----RFFYRFPNGESAADVYDRITGFRETL 224 (297)
Q Consensus 150 qTA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~-----~~~~~~p~gEs~~~~~~R~~~~l~~l 224 (297)
|||+.+ +. .. .+.....|+|++.|.++|++..++...++.+|. .+.+++|+|||+.|+..|++..+-+|
T Consensus 299 ~ta~~l-~~-~~----~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~RlePvImEl 372 (438)
T KOG0234|consen 299 QTAEGL-KL-DY----SVEQWKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRLEPVIMEL 372 (438)
T ss_pred hhHhhc-Cc-ch----hhhhHhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhhhhHhHhh
Confidence 999933 21 11 135666799999999999999999999998885 36789999999999999999999998
Q ss_pred HhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEec-CCCeEEEe
Q 022461 225 RADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKG-YGGRYSIF 294 (297)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~-~~g~~~l~ 294 (297)
.. ..+|+|+||..+|++++.++++.+......+ .++--.|+.++.. .+-.|.+.
T Consensus 373 Er---------------~~~Vlvi~Hqavircll~Yf~~~~~~e~p~l-~~plhtv~~l~~~~y~~~~e~~ 427 (438)
T KOG0234|consen 373 ER---------------QENVLVITHQAVIRCLLAYFLNCSPVELPYL-TVPLHTVIKLTPDAYGTTVESI 427 (438)
T ss_pred hh---------------cccEEEEecHHHHHHHHHHHhcCCHhhcccc-cccceeEEEEeeccccceeEEe
Confidence 75 2349999999999999999999999998888 7888888888855 34455544
No 32
>PRK06193 hypothetical protein; Provisional
Probab=99.83 E-value=2.3e-19 Score=153.27 Aligned_cols=152 Identities=21% Similarity=0.238 Sum_probs=109.1
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCC--CCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVAD--PKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQ 150 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d--~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~q 150 (297)
..+||||||||+.+|..+...+..++ .|.+||+.|++||..++++|+..... ++ .|||||+.||+|
T Consensus 42 ~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~--~d----------~V~sSpl~Ra~q 109 (206)
T PRK06193 42 GGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIP--VG----------KVISSPYCRAWE 109 (206)
T ss_pred CCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCC--CC----------EEEECCcHHHHH
Confidence 46999999999998887666655432 25799999999999999999865432 23 899999999999
Q ss_pred HHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcC
Q 022461 151 TLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDH 230 (297)
Q Consensus 151 TA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~ 230 (297)
||++++..... ...+.+.. ...+.+|+.+.+..|+..+++++.
T Consensus 110 TA~il~~~~~~--------~~~l~~~~------------------------~~~~~~~~~~~y~~~l~~~I~~l~----- 152 (206)
T PRK06193 110 TAQLAFGRHEK--------EIRLNFLN------------------------SEPVPAERNALLKAGLRPLLTTPP----- 152 (206)
T ss_pred HHHHHhccccc--------Cccccccc------------------------ccCCChhhHHHHHHHHHHHHhhCC-----
Confidence 99998753221 11121111 011245788888888888888774
Q ss_pred CCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 231 GRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 231 ~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
.+.++|+||+|+..|+.++..+.+ ..|+.+++...++|.+.+.
T Consensus 153 ---------~~~~~vLlVgHnp~i~~l~g~~~~------------~~g~~~~~~~~~~g~~~~~ 195 (206)
T PRK06193 153 ---------DPGTNTVLVGHDDNLEAATGIYPE------------PEGEAAVFEPLGGEGFKLL 195 (206)
T ss_pred ---------CCCCeEEEEeCchHHHHHhCCCCc------------cCccEEEEEeCCCCCceEe
Confidence 356789999999999887764322 2577777877777766543
No 33
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.81 E-value=6.4e-19 Score=154.32 Aligned_cols=172 Identities=22% Similarity=0.212 Sum_probs=126.5
Q ss_pred CCCeEEEEEeCCcCCCCcccccccC----------C------------------CCCCCCCCHhHHHHHHHHHHHHHhhh
Q 022461 71 PRPRRIILVRHGESEGNVDESAYTR----------V------------------ADPKIALTEKGKAQSEECGRRIRQMI 122 (297)
Q Consensus 71 ~~~~~i~liRHGe~~~n~~~~~~~~----------~------------------~d~D~~LT~~G~~QA~~~~~~L~~~~ 122 (297)
...+.|++|||||..+|.-+..+-. . ...|+|||..|.-||+..|+.|....
T Consensus 10 ~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 10 DVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcC
Confidence 4578999999999998654331100 0 01389999999999999999998876
Q ss_pred hhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHHHHHhccccccccceecCCCcCcCCccCCC----C-ChHHHHHHHHH--
Q 022461 123 EQNDGDGAELDDDWQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQD----R-ERMRVEKAVRL-- 195 (297)
Q Consensus 123 ~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g----~-~~~~~~~~~~~-- 195 (297)
.. ++ +||+||..||+|||..+.+++++.....+.++|.|-|+..-.-.+ . +..++......
T Consensus 90 ~~--i~----------~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD 157 (272)
T KOG3734|consen 90 IA--ID----------VIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVD 157 (272)
T ss_pred CC--cc----------eeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCcc
Confidence 64 23 899999999999999999999976667899999999964322222 1 12222111000
Q ss_pred -hhc-CccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCH
Q 022461 196 -LYG-RFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTV 266 (297)
Q Consensus 196 -~~~-~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~ 266 (297)
.|. .+...+-.+||.+++..|+..++..|+. +.++.+||||+||..+....+.+.|.+.
T Consensus 158 ~~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~------------k~~~~~lLIV~H~~sv~~~~~~l~~~~~ 218 (272)
T KOG3734|consen 158 LNYDPVYKETPRWGESLEDCNDRIQKVFKAIAD------------KYPNENLLIVAHGSSVDTCSAQLQGLPV 218 (272)
T ss_pred cccchhhhhcccccccHHHHHHHHHHHHHHHHH------------hcCCCceEEEeccchHHHHHHHhcCCCc
Confidence 000 0112355789999999999999999998 4667789999999999999998877554
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.79 E-value=4.5e-18 Score=139.36 Aligned_cols=141 Identities=23% Similarity=0.308 Sum_probs=103.1
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|++|||+|||++.+...+ ..|+|.+||+.|+++|+.+|++|+..... +| .|+|||+.||+|||
T Consensus 1 m~~L~LmRHgkA~~~~~~-----~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~--~D----------~VL~Spa~Ra~QTa 63 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG-----IADFDRPLTERGRKEAELVAAWLAGQGVE--PD----------LVLVSPAVRARQTA 63 (163)
T ss_pred CceEEEeecccccccCCC-----CCCccCcCCHHHHHHHHHHHHHHHhcCCC--CC----------EEEeChhHHHHHHH
Confidence 689999999999987642 46889999999999999999999998763 23 99999999999999
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcCCC
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGR 232 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~ 232 (297)
+++++.++.. ..++.+ |.. |++. . .-+...++.+.
T Consensus 64 e~v~~~~~~~---~~~~~~---~l~---------------------------p~~d-~----~~~l~~l~~~~------- 98 (163)
T COG2062 64 EIVAEHLGEK---KVEVFE---ELL---------------------------PNGD-P----GTVLDYLEALG------- 98 (163)
T ss_pred HHHHHhhCcc---cceecc---ccC---------------------------CCCC-H----HHHHHHHHHhc-------
Confidence 9999988721 122211 111 1111 1 11122233321
Q ss_pred CCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEec
Q 022461 233 FQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKG 286 (297)
Q Consensus 233 ~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~ 286 (297)
+.-.+++||+|...+..++..+.+. ... .. .+++++|.+++++
T Consensus 99 -------d~v~~vllVgH~P~l~~l~~~L~~~--~~~-~~-~fptsgia~l~~~ 141 (163)
T COG2062 99 -------DGVGSVLLVGHNPLLEELALLLAGG--ARL-PV-KFPTSGIAVLEFD 141 (163)
T ss_pred -------ccCceEEEECCCccHHHHHHHHccc--ccc-cc-CCCcccEEEEEec
Confidence 2357899999999999999999875 111 11 6899999999998
No 35
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.77 E-value=1.4e-17 Score=141.04 Aligned_cols=123 Identities=24% Similarity=0.314 Sum_probs=87.7
Q ss_pred CCCeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHH
Q 022461 71 PRPRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQ 150 (297)
Q Consensus 71 ~~~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~q 150 (297)
...++||||||||+.....+ . ...|. .|||+.|++||+.++++|++.... + .|||||+.||+|
T Consensus 52 ~~~~~L~LiRHGet~~~~~~--~-~~sD~-RpLTerG~~qA~~lg~~L~~~~~~---d----------~I~sSpa~Ra~q 114 (201)
T PRK15416 52 KQHPVVVLFRHAERCDRSDN--Q-CLSDK-TGITVKGTQDARELGKAFSADIPD---Y----------DLYSSNTVRTIQ 114 (201)
T ss_pred cCCCEEEEEeCccccCccCC--C-CCCCC-CCCCHHHHHHHHHHHHHHhCCCCC---C----------EEEECCCHHHHH
Confidence 34568999999998321111 1 12333 789999999999999999864321 2 899999999999
Q ss_pred HHHHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhcC
Q 022461 151 TLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDH 230 (297)
Q Consensus 151 TA~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~ 230 (297)
||++++.. .++.+++.|+|++.+ ...++.+++.
T Consensus 115 TAe~ia~~------~~v~~~~~Lye~~~~-------------------------------------~~~~i~~~i~---- 147 (201)
T PRK15416 115 SATWFSAG------KKLTVDKRLSDCGNG-------------------------------------IYSAIKDLQR---- 147 (201)
T ss_pred HHHHHhcC------CCcEecHHHhhcCch-------------------------------------hHHHHHHHHH----
Confidence 99999762 247778888776432 2233444444
Q ss_pred CCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCC
Q 022461 231 GRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWT 265 (297)
Q Consensus 231 ~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~ 265 (297)
..++++|+||+|+..|..+.....+..
T Consensus 148 --------~~~~~tVLIVGHnp~i~~La~~~~~~~ 174 (201)
T PRK15416 148 --------KSPDKNIVIFTHNHCLTYIAKDKRGVK 174 (201)
T ss_pred --------hCCCCEEEEEeCchhHHHHHHHhcCCC
Confidence 234588999999999999998766533
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.55 E-value=9e-06 Score=71.53 Aligned_cols=72 Identities=28% Similarity=0.193 Sum_probs=56.2
Q ss_pred eEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHH
Q 022461 74 RRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQ 153 (297)
Q Consensus 74 ~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~ 153 (297)
..++++|||+..- ..||+.|++|+..+|++++......... +...+..+.+++|+..||+|||+
T Consensus 4 ~v~~~~RHg~r~p--------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~--~~~~~~~~~~~ss~~~Rt~~Sa~ 67 (242)
T cd07061 4 QVQVLSRHGDRYP--------------GELTPFGRQQAFELGRYFRQRYGELLLL--HSYNRSDLYIRSSDSQRTLQSAQ 67 (242)
T ss_pred EEEEEEecCCCCc--------------hhhhHHHHHHHHHHHHHHHHHHHHhccc--ccCCCCeeEEEECCCcHHHHHHH
Confidence 5789999998742 2399999999999999999876541100 01234567999999999999999
Q ss_pred HHHHhccc
Q 022461 154 FLGRAFER 161 (297)
Q Consensus 154 ~i~~~~~~ 161 (297)
.++.++-.
T Consensus 68 ~~~~gl~~ 75 (242)
T cd07061 68 AFLAGLFP 75 (242)
T ss_pred HHHHhcCC
Confidence 99998864
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.52 E-value=0.00046 Score=63.17 Aligned_cols=57 Identities=25% Similarity=0.211 Sum_probs=45.2
Q ss_pred CCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHHHHHhcc
Q 022461 101 IALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQFLGRAFE 160 (297)
Q Consensus 101 ~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~i~~~~~ 160 (297)
-.||+.|.+|...+|++++..... -..+.-.+..+.|++|...||++||..++.++-
T Consensus 61 g~LT~~G~~q~~~lG~~lr~~Y~~---l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 61 GQLTPRGMEQHYQLGKRLRERYPG---LFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp TSBTHHHHHHHHHHHHHHHHHHHT---SSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcccchhhhHHHHHHHHHHHHHHH---hccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 349999999999999999988763 111111235679999999999999999998886
No 38
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=97.02 E-value=0.0062 Score=57.94 Aligned_cols=88 Identities=22% Similarity=0.215 Sum_probs=59.0
Q ss_pred CeEEEEEeCCcCCCCccc---------ccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCC-CCCCeeEEEE
Q 022461 73 PRRIILVRHGESEGNVDE---------SAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAEL-DDDWQVYFYV 142 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~---------~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~-~~~~~~~i~s 142 (297)
-+.++|.|||-..--... .-+-.|+-+.-.||.+|..+...+|+++++.....++-.... -.+..+.+++
T Consensus 32 ~~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a 111 (413)
T PRK10173 32 QQVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYA 111 (413)
T ss_pred EEEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEe
Confidence 478999999954322111 111123334456999999999999999988775432211100 1344689999
Q ss_pred cCcHHHHHHHHHHHHhcc
Q 022461 143 SPYTRTLQTLQFLGRAFE 160 (297)
Q Consensus 143 SPl~Ra~qTA~~i~~~~~ 160 (297)
++..||++||+.++.++-
T Consensus 112 ~~~~RT~~Sa~afl~Gl~ 129 (413)
T PRK10173 112 NSLQRTVATAQFFITGAF 129 (413)
T ss_pred CCchHHHHHHHHHHHhcC
Confidence 999999999998877663
No 39
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.91 E-value=0.005 Score=58.62 Aligned_cols=86 Identities=22% Similarity=0.189 Sum_probs=57.2
Q ss_pred CeEEEEEeCCcCCC-----Cccc----ccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEc
Q 022461 73 PRRIILVRHGESEG-----NVDE----SAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVS 143 (297)
Q Consensus 73 ~~~i~liRHGe~~~-----n~~~----~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sS 143 (297)
...-.+-|||...= ..+. .++++.. -.||+.|++|+.++|++|++.....+.-..+.=.+..+.|.||
T Consensus 35 efv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~---GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRSt 111 (411)
T KOG3720|consen 35 EFVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGW---GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRST 111 (411)
T ss_pred EEEEEEeecCCCCcccCCCCCCcccccccCCCCc---chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecC
Confidence 45777889997651 1111 1122222 2499999999999999999943331101111123566899999
Q ss_pred CcHHHHHHHHHHHHhccc
Q 022461 144 PYTRTLQTLQFLGRAFER 161 (297)
Q Consensus 144 Pl~Ra~qTA~~i~~~~~~ 161 (297)
+.-||+.||+.++.++-.
T Consensus 112 d~nRtl~SAqs~laGlfp 129 (411)
T KOG3720|consen 112 DVNRTLMSAQSVLAGLFP 129 (411)
T ss_pred CccHHHHHHHHHHHhhCC
Confidence 999999999998877744
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=96.76 E-value=0.019 Score=54.83 Aligned_cols=88 Identities=19% Similarity=0.091 Sum_probs=57.1
Q ss_pred CeEEEEEeCCcCCCCc-----cc---ccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCC-CCCCCeeEEEEc
Q 022461 73 PRRIILVRHGESEGNV-----DE---SAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAE-LDDDWQVYFYVS 143 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~-----~~---~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~-~~~~~~~~i~sS 143 (297)
.+.++|-|||-..-.. +. .-+..|+-..-.||++|..|...+|+++++.....++-... --.+..++|+++
T Consensus 35 ~~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~ 114 (436)
T PRK10172 35 ESVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIAD 114 (436)
T ss_pred EEEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeC
Confidence 4678899999643221 10 00111211234599999999999999999887643221110 012445799999
Q ss_pred CcHHHHHHHHHHHHhcc
Q 022461 144 PYTRTLQTLQFLGRAFE 160 (297)
Q Consensus 144 Pl~Ra~qTA~~i~~~~~ 160 (297)
+..||+.||+.++.++-
T Consensus 115 ~~~RTi~SAqafl~Gly 131 (436)
T PRK10172 115 VDQRTRKTGEAFLAGLA 131 (436)
T ss_pred CchHHHHHHHHHHHhcC
Confidence 99999999998877764
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=91.28 E-value=0.28 Score=49.26 Aligned_cols=57 Identities=26% Similarity=0.312 Sum_probs=41.8
Q ss_pred CCCHhHHHHHHHHHHHHHhhhhhcCCCCCC-----CCCCCeeEEEEcCcHHHHHHHHHHHHhcc
Q 022461 102 ALTEKGKAQSEECGRRIRQMIEQNDGDGAE-----LDDDWQVYFYVSPYTRTLQTLQFLGRAFE 160 (297)
Q Consensus 102 ~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~-----~~~~~~~~i~sSPl~Ra~qTA~~i~~~~~ 160 (297)
.||..|+.||+++|+.+...... ++.-- ..-.-++.||+|+-.|.+.||+..++++-
T Consensus 511 elT~agr~QAeeLGr~FR~~~~g--g~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL 572 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPG--GQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLL 572 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCC--CCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHH
Confidence 49999999999999999876441 00000 01122358999999999999999998874
No 42
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=49.41 E-value=46 Score=31.40 Aligned_cols=54 Identities=24% Similarity=0.291 Sum_probs=38.3
Q ss_pred CCCHhHHHHHHHHHHHHHhhhhhcCC--CCCCCCCCCeeEEEEcCcHHHHHHHHHHH
Q 022461 102 ALTEKGKAQSEECGRRIRQMIEQNDG--DGAELDDDWQVYFYVSPYTRTLQTLQFLG 156 (297)
Q Consensus 102 ~LT~~G~~QA~~~~~~L~~~~~~~~~--~~~~~~~~~~~~i~sSPl~Ra~qTA~~i~ 156 (297)
.||.+|..|--++|+.+.+....... +..+ ..--+.+|+++-+.|++|.|-.+.
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~-~sv~~lyv~TT~y~RT~QSaLA~l 223 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQ-RSVADLYVVTTKYNRTVQSALAFL 223 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccc-cccceeEEEeccccHHHHHHHHHH
Confidence 48999999999999999886554221 1111 111223799999999999998764
No 43
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=47.87 E-value=35 Score=34.21 Aligned_cols=46 Identities=24% Similarity=0.332 Sum_probs=34.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHH
Q 022461 204 FPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRW 261 (297)
Q Consensus 204 ~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l 261 (297)
+..-|...++..|++..++.+.. ...++.|+||+|+.--..++..|
T Consensus 186 ~~~le~rd~YF~rLK~lIE~ay~------------~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 186 FQNTEVRDQTLSRLKSNIELMVA------------TNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred ccchhhhhHHHHHHHHHHHHHHH------------HcCCCeEEEEEeCCchHHHHHHH
Confidence 34457788999999999998876 34467899999987665544433
No 44
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=42.37 E-value=73 Score=24.51 Aligned_cols=39 Identities=23% Similarity=0.259 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEech--HHHHHHHHHHh
Q 022461 212 DVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHG--LTLRVFLMRWY 262 (297)
Q Consensus 212 ~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg--~~i~~ll~~l~ 262 (297)
.+...+.+.++++.++ .+...|+|++|+ |.+..++...+
T Consensus 45 ~~~~~~~~~l~~~~~~------------~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 45 SLYDQILDALKELVEK------------YPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHHH------------STTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc------------ccCccchhhccchHHHHHHHHHHhh
Confidence 4556777777777763 446899999995 56666555544
No 45
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=41.27 E-value=28 Score=29.24 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHH
Q 022461 208 ESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLT 253 (297)
Q Consensus 208 Es~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~ 253 (297)
-+.+++..|+..|++.|.+ .+++.-||+|+|-..
T Consensus 71 ~~~~~~~~~~~~fv~~iR~------------~hP~tPIllv~~~~~ 104 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIRE------------AHPDTPILLVSPIPY 104 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHT------------T-SSS-EEEEE----
T ss_pred CCHHHHHHHHHHHHHHHHH------------hCCCCCEEEEecCCc
Confidence 4666889999999999987 688999999997543
No 46
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=36.78 E-value=78 Score=28.92 Aligned_cols=28 Identities=18% Similarity=0.106 Sum_probs=22.2
Q ss_pred CCCCCeEEEEechHHHHHHHHHHhCCCH
Q 022461 239 RSQNMNIVIVSHGLTLRVFLMRWYKWTV 266 (297)
Q Consensus 239 ~~~~~~ilvVsHg~~i~~ll~~l~~~~~ 266 (297)
++++.+|+||+||..-..++.++...+.
T Consensus 189 ~~~~~~ivlIg~G~gA~~~~~~la~~~~ 216 (310)
T PF12048_consen 189 QQGGKNIVLIGHGTGAGWAARYLAEKPP 216 (310)
T ss_pred hcCCceEEEEEeChhHHHHHHHHhcCCC
Confidence 3667779999999999888888876443
No 47
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=36.16 E-value=37 Score=30.34 Aligned_cols=69 Identities=12% Similarity=0.154 Sum_probs=31.0
Q ss_pred CCccCCCCChHHHHHHHHHhhcCcc---c-----cCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEE
Q 022461 177 DFGNFQDRERMRVEKAVRLLYGRFF---Y-----RFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIV 248 (297)
Q Consensus 177 ~~g~~~g~~~~~~~~~~~~~~~~~~---~-----~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvV 248 (297)
+....+|..+..+..........|. . ..++-++..+-+.++.++|..... ...++.-+|++
T Consensus 79 plhiipG~Ey~~l~~~v~~~~~~F~~i~~g~PLL~~~g~~~~~~D~~~va~aL~~~~~-----------~~~~~~a~vlm 147 (262)
T PF06180_consen 79 PLHIIPGEEYEKLRATVEAYKHDFKKIVLGRPLLYTMGQENSPEDYEAVAEALAEEFP-----------KKRKDEAVVLM 147 (262)
T ss_dssp E--SCSSHHHHHHHHHHHHHCCCSSEEEEE--SCSS-----SHHHHHHHHHHHHCCS------------TT-TTEEEEEE
T ss_pred ecceeCcHhHHHHHHHHHHhhccCCeEEecccccccccccCChHHHHHHHHHHHHhcc-----------ccCCCCEEEEE
Confidence 4556778777777665433222221 1 112233344444555555544332 13468889999
Q ss_pred echHHHHH
Q 022461 249 SHGLTLRV 256 (297)
Q Consensus 249 sHg~~i~~ 256 (297)
+||..-.+
T Consensus 148 GHGt~h~a 155 (262)
T PF06180_consen 148 GHGTPHPA 155 (262)
T ss_dssp E---SCHH
T ss_pred eCCCCCCc
Confidence 99986544
No 48
>COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]
Probab=30.34 E-value=3.8e+02 Score=23.61 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=55.0
Q ss_pred CeEEEEEeCCcCCCCcccccccCCCCCCCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHH
Q 022461 73 PRRIILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTL 152 (297)
Q Consensus 73 ~~~i~liRHGe~~~n~~~~~~~~~~d~D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA 152 (297)
|+.++++.||-.. +.|.+.+..+.+.+...... +... ..|.=....+++++
T Consensus 2 ~~~~llvgHGsr~-------------------p~~~~~~~~~a~~~~~~~~~---~~v~-------~~f~e~~~P~l~~~ 52 (245)
T COG2138 2 MPALLLVGHGSRL-------------------PRGREVAEAIAARLEERGDF---PPVR-------VAFLELAEPSLREA 52 (245)
T ss_pred CcceeeeecCCCC-------------------ccHHHHHHHHHHHHHhhcCC---ccch-------hHHHHhcCCCHHHH
Confidence 5788999998322 44677777777766665442 2110 33333444467777
Q ss_pred HHHHHhccccccccceecCCCcCcCCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHH
Q 022461 153 QFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAAD 212 (297)
Q Consensus 153 ~~i~~~~~~~~~~~v~~~~~LrE~~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~ 212 (297)
...+...+.. .+.+.|.|-= .|..-..............++.+... |-|++..-
T Consensus 53 ~~al~~~G~~---~ivvVPlfl~--~g~H~~~DIP~~L~~~~~~~~~~~~~-p~G~~~~~ 106 (245)
T COG2138 53 LQALVARGVD---RIVVVPLFLA--AGYHTKRDIPAELGLARQAHPQVDLS-PLGTHPAV 106 (245)
T ss_pred HHHHHhcCCC---eEEEeehhhc--cCchhhcccHHHHHHhhhcCCccccc-ccCCchHH
Confidence 6666655543 5777777733 33332222222233333444444333 55555443
No 49
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=29.09 E-value=37 Score=30.36 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHH
Q 022461 206 NGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRV 256 (297)
Q Consensus 206 ~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ 256 (297)
...|.++...++++.++...+ -..++++.+|||.|..
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~--------------v~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARA--------------VNPDIIVLCHGGPIAT 226 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHC--------------C-TT-EEEEECTTB-S
T ss_pred ccCCHHHHHHHHHHHHHHHHH--------------hCCCeEEEEeCCCCCC
Confidence 357899999999998888764 3567899999999864
No 50
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=27.74 E-value=1e+02 Score=29.95 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=33.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHH
Q 022461 205 PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRW 261 (297)
Q Consensus 205 p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l 261 (297)
-+-|-..+...+++..++...+ .+.++.|+||+|+.--..++..+
T Consensus 156 ~~~e~rd~yl~kLK~~iE~~~~------------~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 156 HNSEERDQYLSKLKKKIETMYK------------LNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred CChhHHHHHHHHHHHHHHHHHH------------HcCCCceEEEecCCccHHHHHHH
Confidence 3456777788888888888776 35568999999998776555544
No 51
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=27.35 E-value=87 Score=29.54 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCC
Q 022461 209 SAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKW 264 (297)
Q Consensus 209 s~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~ 264 (297)
...++..+++..++++.+ .. ++.|+||+|+.---.++..|...
T Consensus 98 ~~~~~~~~lk~~ie~~~~------------~~-~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYK------------KN-GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred hHHHHHHHHHHHHHHHHH------------hc-CCcEEEEEeCCCchHHHHHHHhc
Confidence 455777888888888876 23 78999999986655444444433
No 52
>TIGR02935 probable nitrogen fixation protein. Members of this protein family, called DUF269 by Pfam model pfam03270, are strictly limited to nitrogen-fixing species, although not universal among them. The gene typically is found next to the nifX gene (see TIGRFAMs model TIGR02663).
Probab=27.25 E-value=31 Score=27.62 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=33.8
Q ss_pred CCccCCCCChHHHHHHHHHhhcCccccCCCCCCHHHHHHHHHHHHHHHHhhhc
Q 022461 177 DFGNFQDRERMRVEKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADID 229 (297)
Q Consensus 177 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~ 229 (297)
.||.|++.+..++...+--.-.+-..-+-.|+...+..-|+..|.+.+...++
T Consensus 17 tyG~w~~~sDe~lL~pfIvtke~rr~ipi~gdpDp~tl~Ri~~Fy~Ava~~IE 69 (140)
T TIGR02935 17 TYGAWEGKSDAELLAPYIVTKEERREIPIIGDPDPETLWRIELFYNAVALAIE 69 (140)
T ss_pred CccccCCCChHHHHHhhcCCHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999888776543211111111233567777777899999988876553
No 53
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=26.28 E-value=1.2e+02 Score=26.20 Aligned_cols=42 Identities=10% Similarity=0.119 Sum_probs=25.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHH
Q 022461 207 GESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLR 255 (297)
Q Consensus 207 gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~ 255 (297)
|+...+...-+.+.++.|.+.+.. ...+.+.|++|+|+.---
T Consensus 56 g~~l~~q~~~~~~~i~~i~~~~~~-------~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 56 GRTLQRQAEFLAEAIKYILELYKS-------NRPPPRSVILVGHSMGGL 97 (225)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhh-------ccCCCCceEEEEEchhhH
Confidence 445555555566666666654311 245788899999975543
No 54
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=25.93 E-value=1.4e+02 Score=28.99 Aligned_cols=55 Identities=11% Similarity=0.101 Sum_probs=41.0
Q ss_pred CCCCCHhHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCeeEEEEcCcHHHHHHHHHHHHhccc
Q 022461 100 KIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQVYFYVSPYTRTLQTLQFLGRAFER 161 (297)
Q Consensus 100 D~~LT~~G~~QA~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~sSPl~Ra~qTA~~i~~~~~~ 161 (297)
+..|...|++.|.++++.+-..... ... .-.-.|+++-..||++||+..+.++..
T Consensus 130 ~~~l~~~g~~~a~R~~r~f~~~y~~-~~n------~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 130 VDQLEDEGRMLAKRLARRFPALYYE-LEN------PTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHh-hcC------CceEEeeccchHHHHHHHHHHHhhhcc
Confidence 4457788999999999988776621 001 111279999999999999999998873
No 55
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=25.62 E-value=1.5e+02 Score=25.65 Aligned_cols=46 Identities=24% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCC
Q 022461 207 GESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKW 264 (297)
Q Consensus 207 gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~ 264 (297)
.++.......+.++|..|.. ....++|-|++|+.--+.++..+-.+
T Consensus 69 ~~~a~~s~~~l~~~L~~L~~------------~~~~~~I~ilaHSMG~rv~~~aL~~l 114 (233)
T PF05990_consen 69 RESARFSGPALARFLRDLAR------------APGIKRIHILAHSMGNRVLLEALRQL 114 (233)
T ss_pred hhhHHHHHHHHHHHHHHHHh------------ccCCceEEEEEeCchHHHHHHHHHHH
Confidence 34555666677778887775 34688999999999999888877543
No 56
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=25.28 E-value=2.2e+02 Score=24.24 Aligned_cols=42 Identities=12% Similarity=0.169 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEech--HHHHHHHHHHh
Q 022461 209 SAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHG--LTLRVFLMRWY 262 (297)
Q Consensus 209 s~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg--~~i~~ll~~l~ 262 (297)
.+..+...+...+.++.+ +.++..|+|++|+ |.+..++...+
T Consensus 106 ~~~~~~~~~~~~~~~~~~------------~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 106 AYKSLYNQVLPELKSALK------------QYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHHHHHHh------------hCCCceEEEEccCHHHHHHHHHHHHH
Confidence 344455555666666654 3678899999995 55555555543
No 57
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=23.14 E-value=2.4e+02 Score=24.80 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEe
Q 022461 215 DRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEK 285 (297)
Q Consensus 215 ~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~ 285 (297)
.++++.+.+|.. +-+|+||||..--.+=++-. .. .+.+|.++.+..
T Consensus 186 ~kIEeLi~eLk~---------------~yTIviVTHnmqQAaRvSD~--------ta--Ff~~G~LvE~g~ 231 (253)
T COG1117 186 LKIEELITELKK---------------KYTIVIVTHNMQQAARVSDY--------TA--FFYLGELVEFGP 231 (253)
T ss_pred HHHHHHHHHHHh---------------ccEEEEEeCCHHHHHHHhHh--------hh--hhcccEEEEEcC
Confidence 456666777654 56899999997654433221 11 355777766543
No 58
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=22.99 E-value=5.3e+02 Score=22.81 Aligned_cols=78 Identities=10% Similarity=-0.147 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEechHHHHHHHHHHhCCCHhhhhh-cCCcCCccEEEEEec
Q 022461 208 ESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFLMRWYKWTVEQFEG-LNNLGNGGIIVMEKG 286 (297)
Q Consensus 208 Es~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~-~~~~~n~~i~~l~~~ 286 (297)
.+...-..+...+++.|+..+...-.. .....+.+-++.++|..+|-.|+..| |+....... ....+.++-++|++-
T Consensus 256 ~~~~~~~~~~~~ll~~ll~~l~~~~~~-~~~~~~~k~~~~s~HD~tl~~ll~~L-gl~~~~~~~~~~~pp~as~l~fEl~ 333 (347)
T PF00328_consen 256 YSDEIARLQGGPLLNELLRRLKQAING-NSPGRPPKLVLYSGHDTTLMPLLSAL-GLDNYSPPYQSYWPPYASNLVFELY 333 (347)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCHSS-TCSCSSCSEEEEEE-HHHHHHHHHHT-TCTTTSTTTHSSCSSTT-EEEEEEE
T ss_pred CCchHHHHHHhHHHHHHHHHHhhcccc-ccccccceEEEEecCHHHHHHHHHHh-CCCccCccccCCCCCccceeEEEEE
Confidence 344445555555666666554322100 00123467889999999999888876 544311111 225788888888875
Q ss_pred C
Q 022461 287 Y 287 (297)
Q Consensus 287 ~ 287 (297)
.
T Consensus 334 ~ 334 (347)
T PF00328_consen 334 R 334 (347)
T ss_dssp E
T ss_pred E
Confidence 4
No 59
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=22.79 E-value=1.3e+02 Score=24.77 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=17.3
Q ss_pred CCeEEEEechHHHHHHHHHH
Q 022461 242 NMNIVIVSHGLTLRVFLMRW 261 (297)
Q Consensus 242 ~~~ilvVsHg~~i~~ll~~l 261 (297)
++.+++|+|+.-.-+++.++
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHHHHHHHH
Confidence 45699999999998888888
No 60
>PRK04946 hypothetical protein; Provisional
Probab=22.42 E-value=3.1e+02 Score=23.04 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEech---HHHHHHHHHHhCC
Q 022461 206 NGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHG---LTLRVFLMRWYKW 264 (297)
Q Consensus 206 ~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsHg---~~i~~ll~~l~~~ 264 (297)
.|-+.++....+..||+.-.. .+-..+.|-|| ++++..+..|+..
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~--------------~g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK--------------EHVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--------------cCCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 578999999999999988654 35567788899 8999999998853
No 61
>PF11760 CbiG_N: Cobalamin synthesis G N-terminal; InterPro: IPR021744 Members of this family are involved in cobalamin synthesis. The gene encoded by P72862 from SWISSPROT has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process []. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. The N-terminal of the enzyme is conserved in this family, and the C-terminal and the mid-sections are conserved independently in other families, CbiG_C and CbiG_mid, although the distinct function of each region is unclear. ; PDB: 3EEQ_B.
Probab=21.55 E-value=1.8e+02 Score=21.16 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=20.9
Q ss_pred CCCeEEEEechHHHHHHHHHHhCCCHhhhhhcCCcCCccEEEEEecCCCeEEEe
Q 022461 241 QNMNIVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGGIIVMEKGYGGRYSIF 294 (297)
Q Consensus 241 ~~~~ilvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~n~~i~~l~~~~~g~~~l~ 294 (297)
.+.-|.|.+=|.++|.+.-.+.+ .....-++..+++|+|.+-
T Consensus 12 ~d~~I~i~A~GivvR~iap~l~d------------K~~DPaVvvvde~g~~vIp 53 (84)
T PF11760_consen 12 YDAIIFIMAAGIVVRAIAPLLKD------------KDTDPAVVVVDEDGRFVIP 53 (84)
T ss_dssp -SEEEEES-HHHHHHHHHHH---------------TTT--EEEEE-TT--EEEE
T ss_pred CCeEEEEeCcHHHHHHhChhhcc------------cCCCCCEEEEeCCCCEEEE
Confidence 35566777778888877766543 1234455666677888764
No 62
>PRK00035 hemH ferrochelatase; Reviewed
Probab=21.09 E-value=4.7e+02 Score=23.86 Aligned_cols=16 Identities=25% Similarity=0.470 Sum_probs=12.5
Q ss_pred CCCeEEEEechHHHHH
Q 022461 241 QNMNIVIVSHGLTLRV 256 (297)
Q Consensus 241 ~~~~ilvVsHg~~i~~ 256 (297)
++..+|++.||...+.
T Consensus 188 ~~~~llfs~HG~P~~~ 203 (333)
T PRK00035 188 EPDRLLFSAHGLPQRY 203 (333)
T ss_pred CCcEEEEecCCCchHH
Confidence 4578999999966654
No 63
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=20.53 E-value=2.1e+02 Score=26.86 Aligned_cols=27 Identities=11% Similarity=-0.028 Sum_probs=20.8
Q ss_pred CCCCeEEEEechHHHHHHHHHHhCCCH
Q 022461 240 SQNMNIVIVSHGLTLRVFLMRWYKWTV 266 (297)
Q Consensus 240 ~~~~~ilvVsHg~~i~~ll~~l~~~~~ 266 (297)
.=++.+||+||.....-+-....++++
T Consensus 58 ~I~~~llifSHd~~~~ein~~v~~I~F 84 (356)
T PF05060_consen 58 GIEEALLIFSHDFYSEEINDLVQSIDF 84 (356)
T ss_pred CccceEEEEeccCChHHHHHHHHhCCc
Confidence 347789999999988877776666555
No 64
>PLN02847 triacylglycerol lipase
Probab=20.25 E-value=3.5e+02 Score=27.39 Aligned_cols=42 Identities=19% Similarity=0.068 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCeEEEEec--hHHHHHHHHHHhC
Q 022461 210 AADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSH--GLTLRVFLMRWYK 263 (297)
Q Consensus 210 ~~~~~~R~~~~l~~l~~~~~~~~~~~~~~~~~~~~ilvVsH--g~~i~~ll~~l~~ 263 (297)
...+...+...+.+++. ..++-.|+|++| |+.+.+|+..++.
T Consensus 230 ArwI~~~i~~~L~kal~------------~~PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 230 ARWIAKLSTPCLLKALD------------EYPDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred HHHHHHHHHHHHHHHHH------------HCCCCeEEEeccChHHHHHHHHHHHHh
Confidence 33344445555555554 467778999999 5777788877764
Done!