Your job contains 1 sequence.
>022463
MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS
PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI
DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI
PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG
GPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRPCVR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022463
(297 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 1285 5.0e-131 1
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 1285 5.0e-131 1
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 1011 5.4e-102 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 1005 2.3e-101 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 1005 2.3e-101 1
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 1001 6.2e-101 1
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 994 3.4e-100 1
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 992 5.6e-100 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 992 5.6e-100 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 991 7.1e-100 1
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 989 1.2e-99 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 986 2.4e-99 1
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 979 1.3e-98 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 971 9.4e-98 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 971 9.4e-98 1
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 967 2.5e-97 1
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 966 3.2e-97 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 963 6.6e-97 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 963 6.6e-97 1
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 962 8.4e-97 1
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 962 8.4e-97 1
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 960 1.4e-96 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 956 3.7e-96 1
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 955 4.7e-96 1
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 954 5.9e-96 1
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 953 7.6e-96 1
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 949 2.0e-95 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 947 3.3e-95 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 944 6.8e-95 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 936 4.8e-94 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 922 1.5e-92 1
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 922 1.5e-92 1
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 911 2.1e-91 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 898 5.1e-90 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 896 8.3e-90 1
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 883 2.0e-88 1
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 880 4.1e-88 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 849 8.0e-85 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 807 2.2e-80 1
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 792 8.7e-79 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 663 4.1e-65 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 660 8.5e-65 1
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 636 3.0e-62 1
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 636 3.0e-62 1
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 587 4.6e-57 1
UNIPROTKB|G3V4W5 - symbol:SHMT2 "Serine hydroxymethyltran... 451 6.9e-57 2
UNIPROTKB|G3V5L0 - symbol:SHMT2 "Serine hydroxymethyltran... 577 5.3e-56 1
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 575 8.6e-56 1
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 568 4.8e-55 1
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 564 1.3e-54 1
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 564 1.3e-54 1
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 563 1.6e-54 1
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 558 5.5e-54 1
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 553 1.9e-53 1
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 549 4.9e-53 1
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 540 4.4e-52 1
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 538 7.2e-52 1
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 534 1.9e-51 1
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 534 1.9e-51 1
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 528 8.3e-51 1
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 524 2.2e-50 1
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 522 3.6e-50 1
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 515 2.0e-49 1
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 514 2.5e-49 1
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 513 3.2e-49 1
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 505 2.3e-48 1
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 503 3.7e-48 1
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 502 4.7e-48 1
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 501 6.0e-48 1
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 501 6.0e-48 1
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 495 2.6e-47 1
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 493 4.2e-47 1
UNIPROTKB|I3LGT5 - symbol:I3LGT5 "Serine hydroxymethyltra... 486 2.3e-46 1
UNIPROTKB|G3V540 - symbol:SHMT2 "Serine hydroxymethyltran... 451 1.2e-42 1
UNIPROTKB|J3KRZ5 - symbol:SHMT1 "Serine hydroxymethyltran... 422 1.4e-39 1
UNIPROTKB|G3V2W0 - symbol:SHMT2 "Serine hydroxymethyltran... 380 4.0e-35 1
UNIPROTKB|G3V4X0 - symbol:SHMT2 "Serine hydroxymethyltran... 375 1.3e-34 1
UNIPROTKB|G3V2E4 - symbol:SHMT2 "Serine hydroxymethyltran... 334 3.0e-30 1
UNIPROTKB|G3V4T0 - symbol:SHMT2 "Serine hydroxymethyltran... 334 3.0e-30 1
UNIPROTKB|G3V3Y8 - symbol:SHMT2 "Serine hydroxymethyltran... 323 4.4e-29 1
UNIPROTKB|G3V241 - symbol:SHMT2 "Serine hydroxymethyltran... 302 7.3e-27 1
TIGR_CMR|SPO_3529 - symbol:SPO_3529 "serine hydroxymethyl... 198 1.0e-13 1
UNIPROTKB|G3V2D2 - symbol:SHMT2 "Serine hydroxymethyltran... 154 9.3e-11 1
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 243/259 (93%), Positives = 252/259 (97%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPEKWGVNVQ LSGS
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGS 150
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYI
Sbjct: 151 PANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI 210
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQ+EKSATLFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAA VI
Sbjct: 211 DYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVI 270
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEV YD+E+KINQAVFPGLQG
Sbjct: 271 PSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQG 330
Query: 241 GPHNHTITGLAVALKQVCT 259
GPHNHTITGLAVALKQ T
Sbjct: 331 GPHNHTITGLAVALKQATT 349
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 243/259 (93%), Positives = 253/259 (97%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAF+LDP KWGVNVQSLSGS
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGS 150
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+E+TGYI
Sbjct: 151 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYI 210
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQLEKSA LFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAAGVI
Sbjct: 211 DYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVI 270
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEYADVVTTTTHKSLRGPRGAMIFFRKG+KEINKQGKEV YDYE++INQAVFPGLQG
Sbjct: 271 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQG 330
Query: 241 GPHNHTITGLAVALKQVCT 259
GPHNHTITGLAVALKQ T
Sbjct: 331 GPHNHTITGLAVALKQART 349
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
Identities = 185/256 (72%), Positives = 219/256 (85%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M A+GSVM+NKYSEGYPGARYYGGN++ID E+LCQ+RAL AF LDP KWGVNVQ LSGS
Sbjct: 48 MDALGSVMSNKYSEGYPGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGS 107
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N QVY A++ PH R+M LDLP GGHLSHGYQTDTKKISAVS +FE+MPYR++ +TG I
Sbjct: 108 PANMQVYQAIMPPHGRLMGLDLPSGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLI 167
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LE A LFRPK++VAG SAY RL DY R+R++ + A ++ DMAHISGLV+AGVI
Sbjct: 168 DYDMLEHDAQLFRPKILVAGTSAYCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVI 227
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEYADVVTTTTHKSLRGPRGAMIFFR+G+++ +K+G ++YD E+KIN +VFPG QG
Sbjct: 228 PSPFEYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNPIYYDLEDKINFSVFPGHQG 287
Query: 241 GPHNHTITGLAVALKQ 256
GPHNHTIT LAVALKQ
Sbjct: 288 GPHNHTITALAVALKQ 303
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 184/258 (71%), Positives = 220/258 (85%)
Query: 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 62
A+G+ M NKYSEGYPGARYYGGNE+ID E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+
Sbjct: 56 ALGTPMCNKYSEGYPGARYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPA 115
Query: 63 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 122
N QVY A++KPH+R+M LDLPHGGHLSHGYQTD++KISAVS +FETMPYR++ TG IDY
Sbjct: 116 NLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDY 175
Query: 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182
D LEK+A L+RPK++VAG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPS
Sbjct: 176 DMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPS 235
Query: 183 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 241
PFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ +N K G+E+ YD E IN +VFPG QGG
Sbjct: 236 PFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGG 295
Query: 242 PHNHTITGLAVALKQVCT 259
PHNHTI LA ALKQ T
Sbjct: 296 PHNHTIAALATALKQANT 313
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 184/258 (71%), Positives = 220/258 (85%)
Query: 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 62
A+G+ M NKYSEGYPGARYYGGNE+ID E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+
Sbjct: 56 ALGTPMCNKYSEGYPGARYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPA 115
Query: 63 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 122
N QVY A++KPH+R+M LDLPHGGHLSHGYQTD++KISAVS +FETMPYR++ TG IDY
Sbjct: 116 NLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDY 175
Query: 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182
D LEK+A L+RPK++VAG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPS
Sbjct: 176 DMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPS 235
Query: 183 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 241
PFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ +N K G+E+ YD E IN +VFPG QGG
Sbjct: 236 PFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGG 295
Query: 242 PHNHTITGLAVALKQVCT 259
PHNHTI LA ALKQ T
Sbjct: 296 PHNHTIAALATALKQANT 313
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 187/259 (72%), Positives = 213/259 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M A+GS+M NKYSEGYPGARYYGGNE+ID AE LCQ RALEAF LD EKWGVNVQ SGS
Sbjct: 70 MDALGSIMQNKYSEGYPGARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGS 129
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N Q Y A++KPHDR+M LDLPHGGHLSHG+ T K ISAVS +F TMPY +N+ TG I
Sbjct: 130 PANLQAYQAVMKPHDRLMGLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGII 189
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LEK+A FRPK+IVAGASAYARL DY+R+RK+ A +L DMAHISGLVAAGVI
Sbjct: 190 DYDSLEKAAIQFRPKVIVAGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVI 249
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEYAD+VTTTTHKSLRGPRGAMIF+RKG + +K+G + Y+ E+KIN +VFPG QG
Sbjct: 250 PSPFEYADIVTTTTHKSLRGPRGAMIFYRKGTRSHDKRGNPILYELEDKINFSVFPGHQG 309
Query: 241 GPHNHTITGLAVALKQVCT 259
GPHNHTIT LAVAL Q T
Sbjct: 310 GPHNHTITALAVALGQAKT 328
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 185/257 (71%), Positives = 218/257 (84%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
+ A+GS M NKYSEGYPGARYYGGNE+ID +E LCQ+RALE F LD ++WGVNVQ+LSG+
Sbjct: 79 LDALGSPMQNKYSEGYPGARYYGGNEFIDQSERLCQQRALETFGLDDKQWGVNVQALSGA 138
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N VY+AL+ HDR+M LDLPHGGHLSHGYQT TKKIS +S +FET+PYRL+ESTGYI
Sbjct: 139 PANLYVYSALMGVHDRMMGLDLPHGGHLSHGYQTPTKKISFISKYFETVPYRLDESTGYI 198
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD+LE+ A ++RPK+IVAG SAY+R DY+R+R++C+K A MLADMAHISG+VAA VI
Sbjct: 199 DYDKLEELAHIYRPKIIVAGTSAYSRFIDYKRMREICDKVNAYMLADMAHISGMVAAKVI 258
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGK-EVFYDYEEKINQAVFPGLQ 239
P PF YAD+VTTTTHKSLRGPRGAMIFFRKGV+ N + K EV YD E INQ+VFPG Q
Sbjct: 259 PGPFGYADIVTTTTHKSLRGPRGAMIFFRKGVRSTNPKTKAEVMYDLENPINQSVFPGHQ 318
Query: 240 GGPHNHTITGLAVALKQ 256
GGPHNHTI LAVALKQ
Sbjct: 319 GGPHNHTIAALAVALKQ 335
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 185/259 (71%), Positives = 220/259 (84%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M +GS M NKYSEGYPG RYYGGNE ID AE+LCQKRALEAF LDP +WGVNVQ LSG+
Sbjct: 75 MDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGA 134
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N Y+A+L+ DRIM LDLPHGGHLSHGYQT+T KIS +S +F+TMPYRLNE TG I
Sbjct: 135 PANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGII 194
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LEK+A LFRPK+IVAGASAY+R+ DY+R+R++ +K A +L+DMAHISGLV+AGV
Sbjct: 195 DYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSAGVT 254
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
SPF Y+D+VTTTTHKSLRGPRGAMIFFRKG++++ K+GKE+ Y+ E KIN +VFPG QG
Sbjct: 255 DSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKGKEIPYELERKINFSVFPGHQG 314
Query: 241 GPHNHTITGLAVALKQVCT 259
GPHNHTI+ LAVALKQ CT
Sbjct: 315 GPHNHTISALAVALKQ-CT 332
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 185/259 (71%), Positives = 220/259 (84%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M +GS M NKYSEGYPG RYYGGNE ID AE+LCQKRALEAF LDP +WGVNVQ LSG+
Sbjct: 75 MDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGA 134
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N Y+A+L+ DRIM LDLPHGGHLSHGYQT+T KIS +S +F+TMPYRLNE TG I
Sbjct: 135 PANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGII 194
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LEK+A LFRPK+IVAGASAY+R+ DY+R+R++ +K A +L+DMAHISGLV+AGV
Sbjct: 195 DYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSAGVT 254
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
SPF Y+D+VTTTTHKSLRGPRGAMIFFRKG++++ K+GKE+ Y+ E KIN +VFPG QG
Sbjct: 255 DSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKGKEIPYELERKINFSVFPGHQG 314
Query: 241 GPHNHTITGLAVALKQVCT 259
GPHNHTI+ LAVALKQ CT
Sbjct: 315 GPHNHTISALAVALKQ-CT 332
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 185/258 (71%), Positives = 214/258 (82%)
Query: 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 62
A+GS M NKYSEGYPGARYYGGN++ID E LCQ RAL+AF LD +KWGVNVQ LSGSP+
Sbjct: 56 ALGSPMCNKYSEGYPGARYYGGNQHIDAIELLCQSRALKAFNLDADKWGVNVQCLSGSPA 115
Query: 63 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 122
N QVY AL++PHDR+M LDLPHGGHLSHGYQT ++KISAVS +FET PYR+N TG IDY
Sbjct: 116 NLQVYQALMRPHDRLMGLDLPHGGHLSHGYQTPSRKISAVSTYFETFPYRVNLETGIIDY 175
Query: 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182
D LE +A L+RPK++VAG SAY RL DY R+RK+ +K A ++ DMAHISGL+AAGVIPS
Sbjct: 176 DTLEANAELYRPKILVAGTSAYCRLIDYARMRKIADKVGAYLVVDMAHISGLIAAGVIPS 235
Query: 183 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 241
PFEYADVVTTTTHKSLRGPRGAMIFFRKGV+ + K GK++ YD E IN +VFPG QGG
Sbjct: 236 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVRSTDPKTGKDIMYDLEGPINFSVFPGHQGG 295
Query: 242 PHNHTITGLAVALKQVCT 259
PHNHTIT L+VALK T
Sbjct: 296 PHNHTITALSVALKYAAT 313
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 182/256 (71%), Positives = 214/256 (83%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRALE F LDP KWGVNVQSLSGS
Sbjct: 92 MDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGS 151
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL+ + RIM LDLP GGHL+HG+ T +K+SA S FF++MPY+++ +G I
Sbjct: 152 PANFAVYTALVGANGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLI 211
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD+LE++A LFRPK+++AG S YAR DYER RK+ K A +++DMAHISGLVAAG+I
Sbjct: 212 DYDKLEENAMLFRPKVLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLI 271
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEY+DVVTTTTHKSLRGPRGAMIF+RKGV+ +N +G E YD EEKIN AVFPGLQG
Sbjct: 272 PSPFEYSDVVTTTTHKSLRGPRGAMIFYRKGVRSVNAKGVETLYDLEEKINSAVFPGLQG 331
Query: 241 GPHNHTITGLAVALKQ 256
GPHNHTI G+AVALKQ
Sbjct: 332 GPHNHTIAGIAVALKQ 347
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 182/256 (71%), Positives = 215/256 (83%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
+ A+GSVM NKYSEGYPGARYYGGNE+ID AE LCQ+RALE FRL PE+WGVNVQ LSGS
Sbjct: 166 LDALGSVMQNKYSEGYPGARYYGGNEHIDEAERLCQQRALETFRLSPEEWGVNVQPLSGS 225
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N +ALL HDR+M LDLPHGGHLSHGYQT TKKIS +S +FET+PYRL+ESTG I
Sbjct: 226 PANLYAISALLNTHDRLMGLDLPHGGHLSHGYQTPTKKISFISKYFETLPYRLDESTGLI 285
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+ LEK A L+RPKLI+AG SAY+RL DY R+R++ + A +++DMAHISGLVAAGVI
Sbjct: 286 DYESLEKQALLYRPKLIIAGTSAYSRLIDYPRMRQIADNAGAYLMSDMAHISGLVAAGVI 345
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF ++DVVTTTTHKSLRGPRGAMIF+RKG++ +K+G + YD E IN +VFPG QG
Sbjct: 346 PSPFAHSDVVTTTTHKSLRGPRGAMIFYRKGIRRTDKKGNQEMYDLEGPINASVFPGHQG 405
Query: 241 GPHNHTITGLAVALKQ 256
GPHNHTIT LAVAL+Q
Sbjct: 406 GPHNHTITALAVALQQ 421
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 180/258 (69%), Positives = 216/258 (83%)
Query: 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 62
A+G+ ++NKYSEGYPGARYYGGNE+ID E LCQ+RAL+AF + P+KWGVNVQ+LSGSP+
Sbjct: 55 ALGTPLSNKYSEGYPGARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPA 114
Query: 63 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 122
N QVY A++KPH+R+M L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDY
Sbjct: 115 NLQVYQAIMKPHERLMGLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDY 174
Query: 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182
D LEK+A L+RPK++VAG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPS
Sbjct: 175 DTLEKNAILYRPKVLVAGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPS 234
Query: 183 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 241
PFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ IN K GKEV YD E IN +VFPG QGG
Sbjct: 235 PFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSINPKTGKEVLYDLENPINFSVFPGHQGG 294
Query: 242 PHNHTITGLAVALKQVCT 259
PHNHTI LA ALKQ T
Sbjct: 295 PHNHTIAALATALKQAAT 312
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 178/256 (69%), Positives = 212/256 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRALE F LDP KWGVNVQ LSGS
Sbjct: 88 MDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGS 147
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTA++ + RIM LDLP GGHL+HG+ T +K+SA S FF+++PY+++ +TG I
Sbjct: 148 PANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLI 207
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD+LE++A LFRPK I+AG S YAR DYER RK+ K A +++DMAHISGLVAAG+I
Sbjct: 208 DYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLI 267
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEY+DVVTTTTHKSLRGPRGA+IF+RKGV+ N +G + YD EEKIN AVFPGLQG
Sbjct: 268 PSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQG 327
Query: 241 GPHNHTITGLAVALKQ 256
GPHNHTI G+AVAL+Q
Sbjct: 328 GPHNHTIAGIAVALRQ 343
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 178/256 (69%), Positives = 212/256 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRALE F LDP KWGVNVQ LSGS
Sbjct: 88 MDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGS 147
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTA++ + RIM LDLP GGHL+HG+ T +K+SA S FF+++PY+++ +TG I
Sbjct: 148 PANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLI 207
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD+LE++A LFRPK I+AG S YAR DYER RK+ K A +++DMAHISGLVAAG+I
Sbjct: 208 DYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLI 267
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFEY+DVVTTTTHKSLRGPRGA+IF+RKGV+ N +G + YD EEKIN AVFPGLQG
Sbjct: 268 PSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQG 327
Query: 241 GPHNHTITGLAVALKQ 256
GPHNHTI G+AVAL+Q
Sbjct: 328 GPHNHTIAGIAVALRQ 343
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 180/260 (69%), Positives = 214/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N YTALL+PHDRIM LDLP GGHL+HGY TD K+ISA SIFFE+MPY+LN TG I
Sbjct: 145 PANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLNPKTGLI 204
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 205 DYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 264
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ADVVTTTTHK+LRG R +IF+RKGV+ ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 265 PSPFEHADVVTTTTHKTLRGARSGLIFYRKGVRTVDPKTGREIPYTFEDRINFAVFPSLQ 324
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 325 GGPHNHAIAAVAVALKQACT 344
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 176/256 (68%), Positives = 211/256 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A GS + NKYSEGYPG RYYGG E +D E LCQKRALEAF LDP+ WGVNVQ SGS
Sbjct: 74 LEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRALEAFDLDPQLWGVNVQPYSGS 133
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF YTA+L PH+RIM LDLP GGHL+HGY +D ++ISA SI+FE+MPY+LN TG I
Sbjct: 134 PANFAAYTAVLNPHERIMGLDLPDGGHLTHGYMSDVRRISATSIYFESMPYKLNPKTGLI 193
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQ+E +A LFRPKLI+AG SAYARL DY RI+ +C++ A MLADMAHISGLVAA I
Sbjct: 194 DYDQMELTAKLFRPKLIIAGTSAYARLIDYCRIKTLCSEINAYMLADMAHISGLVAAKAI 253
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF++AD+VTTTTHKSLRG R +IF+RKGV+ ++K+GKE+ YD EEK+N +VFP LQG
Sbjct: 254 PSPFQHADIVTTTTHKSLRGSRAGLIFYRKGVRSVDKKGKEIMYDLEEKVNFSVFPSLQG 313
Query: 241 GPHNHTITGLAVALKQ 256
GPHNH I G+AVALKQ
Sbjct: 314 GPHNHAIAGVAVALKQ 329
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 176/261 (67%), Positives = 215/261 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGS
Sbjct: 62 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGS 121
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI
Sbjct: 122 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYI 181
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A LF PKLI+AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+
Sbjct: 182 NYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVV 241
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VVTTTTHK+LRG R MIF+RKGVK ++ K GKE+ Y+ E IN AVFPGLQ
Sbjct: 242 PSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQ 301
Query: 240 GGPHNHTITGLAVALKQVCTL 260
GGPHNH I G+AVALKQ TL
Sbjct: 302 GGPHNHAIAGVAVALKQAMTL 322
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 176/261 (67%), Positives = 215/261 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGS
Sbjct: 62 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGS 121
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI
Sbjct: 122 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYI 181
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A LF PKLI+AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+
Sbjct: 182 NYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVV 241
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VVTTTTHK+LRG R MIF+RKGVK ++ K GKE+ Y+ E IN AVFPGLQ
Sbjct: 242 PSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQ 301
Query: 240 GGPHNHTITGLAVALKQVCTL 260
GGPHNH I G+AVALKQ TL
Sbjct: 302 GGPHNHAIAGVAVALKQAMTL 322
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 180/258 (69%), Positives = 212/258 (82%)
Query: 3 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 62
A+GS M+NKYSEGYPG RYYGGN++ID E LCQ+RAL AF + +KWGVNVQ LSGSP+
Sbjct: 58 ALGSPMSNKYSEGYPGKRYYGGNQHIDEIELLCQRRALAAFNVTEDKWGVNVQCLSGSPA 117
Query: 63 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 122
N QVY A++ PH R+M LDLPHGGHLSHGYQT +KISAVS +FETMPYR++ TG IDY
Sbjct: 118 NLQVYQAIMPPHGRLMGLDLPHGGHLSHGYQTPQRKISAVSTYFETMPYRVDLETGIIDY 177
Query: 123 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 182
DQLEK+ L+RPK++VAG SAY RL DY R+RK+ + A ++ D+AHISGLVA+GVIPS
Sbjct: 178 DQLEKNVVLYRPKILVAGTSAYCRLIDYARMRKIADLVGAYLVVDIAHISGLVASGVIPS 237
Query: 183 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 241
PF +ADVVTTTTHKSLRGPRGAMIFFR+GV+ ++ K GKE YD EE IN +VFPG QGG
Sbjct: 238 PFLHADVVTTTTHKSLRGPRGAMIFFRRGVRSVDPKTGKETMYDLEEPINFSVFPGHQGG 297
Query: 242 PHNHTITGLAVALKQVCT 259
PHNHTIT LAVALKQ T
Sbjct: 298 PHNHTITALAVALKQAST 315
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 178/260 (68%), Positives = 214/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N YTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG I
Sbjct: 145 PANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLI 204
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 205 DYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 264
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPF+YAD+VTTTTHK+LRG R +IF+RKGV+ ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 265 PSPFKYADIVTTTTHKTLRGARSGLIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQ 324
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 325 GGPHNHAIAAVAVALKQACT 344
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 178/260 (68%), Positives = 215/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG I
Sbjct: 145 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLI 204
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+QL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 205 DYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 264
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPF++AD+VTTTTHK+LRG R +IF+RKGVK ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 265 PSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQ 324
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 325 GGPHNHAIAAVAVALKQACT 344
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 175/261 (67%), Positives = 212/261 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E++D E LCQKRAL+AFRLDP+KWGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA S+FFE+MPY++N TGYI
Sbjct: 124 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI 183
Query: 121 DYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
DYD+LE++A LF PKLI+A G S Y+R DY R+R++ N A ++ADMAHISGLVAAGV
Sbjct: 184 DYDKLEENARLFHPKLIIAAGVSCYSRNLDYARMRQIANANSAYLMADMAHISGLVAAGV 243
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGL 238
+PSPFE+ DVV+TTTHK+LRG R MIF+RKG + + K GKE Y+ E INQAVFPGL
Sbjct: 244 VPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSTDPKTGKETLYNLESLINQAVFPGL 303
Query: 239 QGGPHNHTITGLAVALKQVCT 259
QGGPHNH I G+AVAL+Q T
Sbjct: 304 QGGPHNHAIAGIAVALQQAMT 324
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 176/260 (67%), Positives = 214/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 130 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 189
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N YTALL+PHDRIM LDLP GGHL+HGY +D K++SA SIFFE+MPY+LN TG I
Sbjct: 190 PANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRVSATSIFFESMPYKLNPKTGLI 249
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 250 DYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 309
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPF++ADVVTTTTHK+LRG R +IF+RKG++ ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 310 PSPFKHADVVTTTTHKTLRGARSGLIFYRKGMRAVDPKTGREIPYTFEDRINFAVFPSLQ 369
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 370 GGPHNHAIAAVAVALKQACT 389
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 176/260 (67%), Positives = 214/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N YTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG I
Sbjct: 145 PANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLI 204
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQL +A LF+P+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 205 DYDQLALTARLFKPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 264
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPF++AD+VTTTTHK+LRG R +IF+RKGV+ ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 265 PSPFKHADIVTTTTHKTLRGARSGLIFYRKGVQAVDPKTGREIPYTFEDRINFAVFPSLQ 324
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 325 GGPHNHAIAAVAVALKQACT 344
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 176/260 (67%), Positives = 214/260 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N YTALL+PHDRIM LDLP GGHL+HGY +D K++SA SIFFE+MPY+LN TG I
Sbjct: 145 PANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLI 204
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+QL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VI
Sbjct: 205 DYEQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVI 264
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPF++ADVVTTTTHK+LRG R +IF+RKGV+ ++ K G+E+ Y +E++IN AVFP LQ
Sbjct: 265 PSPFKHADVVTTTTHKTLRGARSGLIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQ 324
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I +AVALKQ CT
Sbjct: 325 GGPHNHAIAAVAVALKQACT 344
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 174/260 (66%), Positives = 211/260 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL+A+ LDP+ WGVNVQ SGS
Sbjct: 56 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGS 115
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI
Sbjct: 116 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYI 175
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+
Sbjct: 176 NYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVV 235
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K GKE +Y+ E IN AVFPGLQ
Sbjct: 236 PSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQ 295
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I G+AVALKQ T
Sbjct: 296 GGPHNHAIAGVAVALKQAMT 315
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 173/260 (66%), Positives = 212/260 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WGVNVQ SGS
Sbjct: 259 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGS 318
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI
Sbjct: 319 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPDTGYI 378
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+
Sbjct: 379 NYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVV 438
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+E +Y+ E IN AVFPGLQ
Sbjct: 439 PSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGEETYYELESLINSAVFPGLQ 498
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I G+AVALKQ T
Sbjct: 499 GGPHNHAIAGVAVALKQAMT 518
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 180/255 (70%), Positives = 205/255 (80%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+AVGS +TNKYSEG PG RYYGGNEYID E+LCQ RAL AFRLD KWGVNVQ LSGS
Sbjct: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 178
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTA+L PHDRIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRL+ESTG +
Sbjct: 179 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIV 238
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LEK+ATLFRPKLI+AGASAY+R +DY R+RK+ + A ++ DMAHISGLVAA V+
Sbjct: 239 DYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 298
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PFEY D+VTTTTHKSLRGPRG MIFFRK IN G D E +N AVFPGLQG
Sbjct: 299 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRKD--PIN--G----VDLESAVNNAVFPGLQG 350
Query: 241 GPHNHTITGLAVALK 255
GPHNHTI GLAV LK
Sbjct: 351 GPHNHTIGGLAVCLK 365
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 172/260 (66%), Positives = 209/260 (80%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL+ + LDPE WGVNVQ SGS
Sbjct: 62 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGS 121
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI
Sbjct: 122 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYI 181
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+
Sbjct: 182 NYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVV 241
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VV+TTTHK+LRG R +IF+R+GV+ ++ K GKE Y+ E IN AVFPGLQ
Sbjct: 242 PSPFEHCHVVSTTTHKTLRGCRAGIIFYRRGVRSVDPKTGKETLYNLESLINSAVFPGLQ 301
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I G+AVALKQ T
Sbjct: 302 GGPHNHAIAGVAVALKQAMT 321
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 169/260 (65%), Positives = 208/260 (80%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL+ + LD + WGVNVQ SGS
Sbjct: 62 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGS 121
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI
Sbjct: 122 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYI 181
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YDQLE++A LF P+LI+AG S Y+R DY R+RK+ + A ++ADMAH+SGLVAAGV+
Sbjct: 182 NYDQLEENARLFHPRLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVV 241
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFE+ VV+TTTHK+LRG R MIF+RKGV+ ++ K G+E Y+ E IN AVFPGLQ
Sbjct: 242 PSPFEHCHVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGLQ 301
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I G+AVALKQ T
Sbjct: 302 GGPHNHAIAGVAVALKQAMT 321
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 171/260 (65%), Positives = 208/260 (80%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS M NKYSEGYPG RYYGG E++D E LCQ RAL+ + LDPEKWGVNVQ SGS
Sbjct: 84 LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQDRALKVYGLDPEKWGVNVQPYSGS 143
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTA+++PH RIM LDLP GGHL+HG+ TD KKISA S +MPY++N TGYI
Sbjct: 144 PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATS----SMPYKVNPETGYI 199
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY++LE++A LF P+LI+AG S Y+R DY R+RK+ ++ A +LADMAHISGLVAAGV+
Sbjct: 200 DYNRLEENARLFHPRLIIAGTSCYSRNLDYSRLRKIADENGAYLLADMAHISGLVAAGVV 259
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQ 239
PSPFEY DVV+TTTHK+LRG R +IFFRKGV+ ++ K GKE Y+ E INQAVFPGLQ
Sbjct: 260 PSPFEYCDVVSTTTHKTLRGCRAGVIFFRKGVRSVDAKTGKETMYNLESLINQAVFPGLQ 319
Query: 240 GGPHNHTITGLAVALKQVCT 259
GGPHNH I G+AVALKQ T
Sbjct: 320 GGPHNHAIAGVAVALKQALT 339
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 163/256 (63%), Positives = 203/256 (79%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++++ S +TNKYSEGYPG RYYGGNEYID E L Q+R E F LD EKWGVNVQ SGS
Sbjct: 117 LESLSSCLTNKYSEGYPGKRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGS 176
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N VYT + +PHDRIM LDLP GGHL+HG+ T TKKISA SIFFE+MPY++N TG I
Sbjct: 177 PANLAVYTGVCRPHDRIMGLDLPDGGHLTHGFFTPTKKISATSIFFESMPYKVNPETGII 236
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD+L ++A FRP++I+AG S Y+RL DY R R++C+ A ++ADMAH++G+VAAG+I
Sbjct: 237 DYDKLAEAAKNFRPQIIIAGISCYSRLLDYARFRQICDDVGAYLMADMAHVAGIVAAGLI 296
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPFE+AD+VTTTTHK+LRGPR +IFFRKGV+ G +V YD EE+INQAVFP LQG
Sbjct: 297 PSPFEWADIVTTTTHKTLRGPRAGVIFFRKGVRSTKANGDKVLYDLEERINQAVFPSLQG 356
Query: 241 GPHNHTITGLAVALKQ 256
GPHN+ + G+A A KQ
Sbjct: 357 GPHNNAVAGIATAFKQ 372
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 169/257 (65%), Positives = 209/257 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A+GS TNKY+EGYPG+RYYGG E +D E+LCQKRAL+AFRLD KWGVNVQ SGS
Sbjct: 46 MEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGS 105
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+NF VYTALL+PHDRIM LDLP GGHL+HGYQTD KKISA SIFFE+MPY++ + G I
Sbjct: 106 PANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQTDKKKISASSIFFESMPYQIG-ADGLI 164
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY +LE++A LF+PKLI++GASAY R +DY+R+R + +K A ++ DMAH SGLVAA ++
Sbjct: 165 DYQRLEENALLFKPKLIISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLL 224
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVF-YDYEEKINQAVFPGLQ 239
SPF+Y DVVT+TTHK+LRGPR +IFFR+G K ++ GKE+ YD E KIN AVFP LQ
Sbjct: 225 DSPFDYCDVVTSTTHKTLRGPRSGIIFFRRG-KRVDGNGKEIEEYDIESKINFAVFPSLQ 283
Query: 240 GGPHNHTITGLAVALKQ 256
GGPH + I G+AVALK+
Sbjct: 284 GGPHENVIAGVAVALKE 300
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 172/261 (65%), Positives = 202/261 (77%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS +TNKYSEG PG RYYGGNE+ID E+LC+ RALEAF DP WGVNVQ SGS
Sbjct: 48 IEALGSALTNKYSEGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGS 107
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGY 119
P+NF YTALL+PHDRIM LDLP GGHL+HGY T KKISA SI+FE++PY++N +TGY
Sbjct: 108 PANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGY 167
Query: 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
IDYD+LE+ A FRPKL++ G SAY R +DY R R + +K A++L DMAHISGLVAA
Sbjct: 168 IDYDKLEEKALDFRPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQE 227
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK-QGKEVFYDYEEKINQAVFPGL 238
+PFEY DVVTTTTHKSLRGPR MIF+RKG K K Q + YD+E+KIN AVFP L
Sbjct: 228 AANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPAL 287
Query: 239 QGGPHNHTITGLAVALKQVCT 259
QGGPHNH I LAVALKQ T
Sbjct: 288 QGGPHNHQIGALAVALKQANT 308
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 164/257 (63%), Positives = 204/257 (79%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M +GS + NKYSEGYPG RYYGGNE ID +ESLCQ RALE + LDP KWGVNVQ LSG+
Sbjct: 69 MDLLGSELQNKYSEGYPGERYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGA 128
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGY 119
P+N VY+A++ +R+M LDLP GGHLSHGYQ + IS +S +F++MPY ++ +TG
Sbjct: 129 PANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGL 188
Query: 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
IDYD L+ A FRPK+IVAG SAY+RL DY R +++ A +++DMAHISGLVAA V
Sbjct: 189 IDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANV 248
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ 239
+PSPFE++D+VTTTTHKSLRGPRGAMIFFRKG+K + K+GKE+ Y+ E+KIN +VFPG Q
Sbjct: 249 VPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGKEIPYELEKKINFSVFPGHQ 308
Query: 240 GGPHNHTITGLAVALKQ 256
GGPHNHTI +AVALKQ
Sbjct: 309 GGPHNHTIGAMAVALKQ 325
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 165/256 (64%), Positives = 202/256 (78%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+++GS TNKY+EG PGARYYGGNE +D E+LC KRALE F L+PE+WGVNVQ SGS
Sbjct: 70 MESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGS 129
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+NF +T LLKPHDRIM LDLP GGHL+HGYQTD KKISA SIFFE+MPY++NE TGY+
Sbjct: 130 TANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTDKKKISATSIFFESMPYQVNE-TGYV 188
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+++E +A LFRPKL++AGASAY R +DYER+RK+ +K A +L DMAHISG+VA
Sbjct: 189 DYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQA 248
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
SPF + DVVTTTTHK+LRGPR +IFFRK K + +G + D E +IN AVFP QG
Sbjct: 249 ISPFLFCDVVTTTTHKTLRGPRAGLIFFRK-TKRRDAKGNIIDDDLENRINFAVFPSCQG 307
Query: 241 GPHNHTITGLAVALKQ 256
GPH +TI G+AVALK+
Sbjct: 308 GPHENTIAGIAVALKE 323
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 163/259 (62%), Positives = 194/259 (74%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A+GS +TNKYSEG PG RYYGG E+ID ESLC+ R+LEAF +PEKWGVNVQ SGS
Sbjct: 48 MEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGS 107
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGY 119
P+NF YTALL+PHDRIM LDLP GGH++HGY + K ISA SI+FE +PY+++ TGY
Sbjct: 108 PANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGY 167
Query: 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
IDYD+LE+ A FRPKLI+ G ++Y R +DY R R V +K A +L DMAH S LVAA
Sbjct: 168 IDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQE 227
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK-QGKEVFYDYEEKINQAVFPGL 238
PFEY DVVTT+THKSLRGPR MIF+RKG K K Q + YD++ KIN AVFP L
Sbjct: 228 AADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPAL 287
Query: 239 QGGPHNHTITGLAVALKQV 257
Q GPHN+ I LAVALKQV
Sbjct: 288 QSGPHNNKIGALAVALKQV 306
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 157/267 (58%), Positives = 197/267 (73%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A+GS +TNKYSEG PGARYY GN+YID E+LC +RAL AF L+ +KWGVNVQ S +
Sbjct: 174 MEALGSHLTNKYSEGMPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCT 233
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGY 119
+NF VYT LL P +RIM LD P GGH+SHGY T KKISA SIFFE+ PY++N TGY
Sbjct: 234 SANFAVYTGLLLPGERIMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGY 293
Query: 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
IDYD+LE A +RPK+++ G S+Y R +D+ R+R++ +K A+++ DMAHISGLVA
Sbjct: 294 IDYDKLEDKALDYRPKILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKE 353
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE-------VFYDYEEKINQ 232
+PF++ D+VT+TTHK LRGPRG +IF+R+G K I KQG YD EEKIN
Sbjct: 354 CSNPFDHCDIVTSTTHKGLRGPRGGIIFYRRGPK-IRKQGHHSSHCDTSTHYDLEEKINF 412
Query: 233 AVFPGLQGGPHNHTITGLAVALKQVCT 259
AVFP LQGGPHN+ I LA+ALKQV T
Sbjct: 413 AVFPSLQGGPHNNHIAALAIALKQVAT 439
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 150/266 (56%), Positives = 197/266 (74%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A+GS +TNKYSEG PGARYY GN+YID E LCQ+RAL AF L+ EKWGVNVQ S +
Sbjct: 178 MEALGSHLTNKYSEGMPGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCT 237
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGY 119
+NF V+T LL P +RIM LD P GGH+SHGY T KK+S SIFFE+ PY+++ TGY
Sbjct: 238 SANFAVFTGLLMPGERIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGY 297
Query: 120 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 179
IDYD+LE+ A +RPK+++ G S+Y R +++ R R + +K A+++ DMA ISGLVAA
Sbjct: 298 IDYDKLEEKALDYRPKILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKE 357
Query: 180 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK------EINKQGKEVFYDYEEKINQA 233
P+PF+Y D+VT+TTHKSLRGPRG +IF+++G+K +N + YD+EEKIN +
Sbjct: 358 SPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFS 417
Query: 234 VFPGLQGGPHNHTITGLAVALKQVCT 259
VFP LQGGPHN+ I LA+ALKQ +
Sbjct: 418 VFPSLQGGPHNNHIAALAIALKQAAS 443
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 124/183 (67%), Positives = 152/183 (83%)
Query: 78 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 137
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLI 60
Query: 138 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 197
+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKT 120
Query: 198 LRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256
LRG R +IF+RKGVK ++ K G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ
Sbjct: 121 LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 180
Query: 257 VCT 259
CT
Sbjct: 181 ACT 183
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 123/184 (66%), Positives = 149/184 (80%)
Query: 78 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 137
M LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI
Sbjct: 1 MGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLI 60
Query: 138 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 197
+AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+
Sbjct: 61 IAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKT 120
Query: 198 LRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 256
LRG R MIF+RKGVK ++ K GKE+ Y+ E IN AVFPGLQGGPHNH I G+AVALKQ
Sbjct: 121 LRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQ 180
Query: 257 VCTL 260
TL
Sbjct: 181 AMTL 184
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 125/258 (48%), Positives = 171/258 (66%)
Query: 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 61
+ +G ++NKYSEGYP RYYGGN+Y+D E LC KRALEAF + E+WGVNVQ LSGS
Sbjct: 44 ECLGDRISNKYSEGYPHKRYYGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSA 103
Query: 62 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 121
+N Q AL+ +IM + L GGHL+HG+ + KK+S S FE+ Y+ N S GY+D
Sbjct: 104 ANVQALYALVGVKGKIMGMHLCSGGHLTHGFFDEKKKVSITSDLFESKLYKCN-SEGYVD 162
Query: 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181
+ + A F+PK+I+ G ++Y R DY+ R++C++ A + AD++HIS VA ++
Sbjct: 163 MESVRNLALSFQPKVIICGYTSYPRDIDYKGFREICDEVNAYLFADISHISSFVACNLLN 222
Query: 182 SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241
+PF YADVVTTTTHK LRGPR A+IFF K K+ + ++KIN +VFP QGG
Sbjct: 223 NPFTYADVVTTTTHKILRGPRSALIFFNK------KRNPGI----DQKINSSVFPSFQGG 272
Query: 242 PHNHTITGLAVALKQVCT 259
PHN+ I +A LK+V T
Sbjct: 273 PHNNKIAAVACQLKEVNT 290
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 125/258 (48%), Positives = 171/258 (66%)
Query: 2 QAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 61
+ +G ++NKYSEGYP RYYGGN+Y+D E LC KRALEAF + E+WGVNVQ LSGS
Sbjct: 44 ECLGDRISNKYSEGYPHKRYYGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSA 103
Query: 62 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 121
+N Q AL+ +IM + L GGHL+HG+ + KK+S S FE+ Y+ N S GY+D
Sbjct: 104 ANVQALYALVGVKGKIMGMHLCSGGHLTHGFFDEKKKVSITSDLFESKLYKCN-SEGYVD 162
Query: 122 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 181
+ + A F+PK+I+ G ++Y R DY+ R++C++ A + AD++HIS VA ++
Sbjct: 163 MESVRNLALSFQPKVIICGYTSYPRDIDYKGFREICDEVNAYLFADISHISSFVACNLLN 222
Query: 182 SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 241
+PF YADVVTTTTHK LRGPR A+IFF K K+ + ++KIN +VFP QGG
Sbjct: 223 NPFTYADVVTTTTHKILRGPRSALIFFNK------KRNPGI----DQKINSSVFPSFQGG 272
Query: 242 PHNHTITGLAVALKQVCT 259
PHN+ I +A LK+V T
Sbjct: 273 PHNNKIAAVACQLKEVNT 290
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 124/256 (48%), Positives = 166/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG+I
Sbjct: 100 QANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHI 153
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY LEK A +PK+I+ G SAY+ + D+ ++R++ + A + DMAH++GLVAAGV
Sbjct: 154 DYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVY 213
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QG
Sbjct: 214 PNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQG 262
Query: 241 GPHNHTITGLAVALKQ 256
GP H I G AVALK+
Sbjct: 263 GPLMHVIAGKAVALKE 278
>UNIPROTKB|G3V4W5 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4W5 SMR:G3V4W5 Ensembl:ENST00000556689
ArrayExpress:G3V4W5 Bgee:G3V4W5 Uniprot:G3V4W5
Length = 237
Score = 451 (163.8 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 81/114 (71%), Positives = 95/114 (83%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 114
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 145 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 198
Score = 152 (58.6 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 156 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 194
VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTT
Sbjct: 199 VCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTT 237
>UNIPROTKB|G3V5L0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V5L0 SMR:G3V5L0 Ensembl:ENST00000554975
ArrayExpress:G3V5L0 Bgee:G3V5L0 Uniprot:G3V5L0
Length = 215
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 106/152 (69%), Positives = 124/152 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG I
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLI 183
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYER 152
DY+QL +A LFRP+LI+AG SAYARL DY R
Sbjct: 184 DYNQLALTARLFRPRLIIAGTSAYARLIDYAR 215
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 120/256 (46%), Positives = 165/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS
Sbjct: 40 LEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGADH----ANVQPHSGS 95
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T I
Sbjct: 96 QANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETI 150
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D++++E+ A +PK+IV GASAY R D+ R + +K A+++ DMAHI+GLVAAG+
Sbjct: 151 DFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLH 210
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP YA+ VTTTTHK+LRGPRG MI R+ +Y + +N +FPG+QG
Sbjct: 211 PSPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EYAKTLNSNIFPGIQG 256
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVALK+
Sbjct: 257 GPLMHVIAAKAVALKE 272
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 121/256 (47%), Positives = 163/256 (63%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG E++D+ E L RA E F D NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGADY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE+TG I
Sbjct: 100 QANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEATGEI 154
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+++E+ A +PK+I+AG SAY+R+ D++R R + + A + DMAH++GLVAAG+
Sbjct: 155 DYEEVERLAKEHQPKMIIAGFSAYSRVVDWQRFRDIADSIGAWLFVDMAHVAGLVAAGLY 214
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P ADVVTTTTHK+LRGPRG +I + KQ E+ +K+N AVFP QG
Sbjct: 215 PNPVPIADVVTTTTHKTLRGPRGGLI--------LAKQNDEL----AKKLNSAVFPAGQG 262
Query: 241 GPHNHTITGLAVALKQ 256
GP H I A+ K+
Sbjct: 263 GPLMHVIAAKAICFKE 278
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 118/256 (46%), Positives = 166/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG EY+D AE+L RA + F + NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEYVDKAEALAIDRACQLFGCEY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY ALL P D ++ + L HGGHL+HG ++ + +PY ++E+ G I
Sbjct: 100 QANSAVYMALLNPGDTVLGMSLAHGGHLTHG-----SPVNFSGKHYNVIPYGIDEA-GQI 153
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YD++E A +PK+I+ G SAY+++ D++R+R++ +K A + DMAH++GL+AAGV
Sbjct: 154 NYDEMEALALEHKPKMIIGGFSAYSQIVDWKRMREIADKVGAYLFVDMAHVAGLIAAGVY 213
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +A VVTTTTHK+L GPRG +I ++ G+E++ +K+N AVFPG QG
Sbjct: 214 PSPVPFAHVVTTTTHKTLAGPRGGLI--------LSNAGEEMY----KKLNSAVFPGGQG 261
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA K+
Sbjct: 262 GPLMHVIAAKAVAFKE 277
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 118/256 (46%), Positives = 166/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG EY+D AE+L RA + F + NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEYVDKAEALAIDRACQLFGCEY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY ALL P D ++ + L HGGHL+HG ++ + +PY ++E+ G I
Sbjct: 100 QANSAVYMALLNPGDTVLGMSLAHGGHLTHG-----SPVNFSGKHYNVIPYGIDEA-GQI 153
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YD++E A +PK+I+ G SAY+++ D++R+R++ +K A + DMAH++GL+AAGV
Sbjct: 154 NYDEMEALALEHKPKMIIGGFSAYSQIVDWKRMREIADKVGAYLFVDMAHVAGLIAAGVY 213
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +A VVTTTTHK+L GPRG +I ++ G+E++ +K+N AVFPG QG
Sbjct: 214 PSPVPFAHVVTTTTHKTLAGPRGGLI--------LSNAGEEMY----KKLNSAVFPGGQG 261
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA K+
Sbjct: 262 GPLMHVIAAKAVAFKE 277
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 121/256 (47%), Positives = 161/256 (62%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG E++D+ E L RA E F D NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGADY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE TG I
Sbjct: 100 QANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEVTGEI 154
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD++ + A +PK+I+AG SAY+R+ D++R R + + A + DMAH++GLVAAG+
Sbjct: 155 DYDEVARLAKEHQPKMIIAGFSAYSRVVDWQRFRDIADSIGAWLFVDMAHVAGLVAAGLY 214
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P ADVVTTTTHK+LRGPRG +I + KQ E+ +K+N AVFP QG
Sbjct: 215 PNPVPIADVVTTTTHKTLRGPRGGLI--------LAKQNDEL----AKKLNSAVFPAGQG 262
Query: 241 GPHNHTITGLAVALKQ 256
GP H I A+ K+
Sbjct: 263 GPLMHVIAAKAICFKE 278
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 118/256 (46%), Positives = 164/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS
Sbjct: 44 MQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGATY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G I
Sbjct: 100 QANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGRLYNIIPYGIDES-GKI 153
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD++E+ A +PK+++ G SAY+ + D+ R+R++ +K A + DMAH++GL+AAGV
Sbjct: 154 DYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIADKIGAYLFVDMAHVAGLIAAGVY 213
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P +A VVT+TTHK+L GPRG +I +E+ K K+N AVFPG QG
Sbjct: 214 PNPVPHAHVVTSTTHKTLAGPRGGIILSAADDEELYK-----------KLNSAVFPGGQG 262
Query: 241 GPHNHTITGLAVALKQ 256
GP H I G AVA K+
Sbjct: 263 GPLMHVIAGKAVAFKE 278
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 123/256 (48%), Positives = 154/256 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A GSV TNKY+EGYPG RYY G EY D E L RA F + NVQ SG+
Sbjct: 40 LEAQGSVFTNKYAEGYPGKRYYAGCEYADAIEELAIDRAKTLFHAEH----ANVQPHSGA 95
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N Y A++KP D IM L L HGGHL+HG K + + + Y LN T I
Sbjct: 96 QANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKANFTGKLYHVIEYGLNAETERI 150
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYD LEK A RP+LIV GASAY R+ D+ER R +C+K A ++ D+AHI+GLVAAG+
Sbjct: 151 DYDNLEKLALEHRPRLIVTGASAYPRILDFERFRAICDKVDAKLMVDIAHIAGLVAAGLH 210
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP YADVVT+T+HK+LRGPRG I KE Y + I+QAVFP +QG
Sbjct: 211 PSPVPYADVVTSTSHKTLRGPRGGFIL----CKE----------QYAKAIDQAVFPVIQG 256
Query: 241 GPHNHTITGLAVALKQ 256
GP + AVA ++
Sbjct: 257 GPLMQVVAAKAVAFQE 272
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 118/256 (46%), Positives = 163/256 (63%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++ GSV+TNKY+EGYPG RYYGG E++D+AE L RA E F D NVQ SGS
Sbjct: 44 LELQGSVLTNKYAEGYPGRRYYGGCEFVDIAEQLAIDRAKELFGADY----ANVQPHSGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N + Y AL+ P D ++A+DL HGGHL+HG +S F++ + Y LN + G I
Sbjct: 100 QANAEAYMALMNPGDTLLAMDLSHGGHLTHG-----SPVSFSGKFYKAVHYGLN-AHGDI 153
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+Q + A +PK+I+AG SA++ + D++R R++ + A + D+AH++GLVAAGV
Sbjct: 154 DYEQAAQLAQEHKPKVILAGFSAFSGIVDWQRFREIADSVNAYFMTDIAHVAGLVAAGVY 213
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP + ADV TTTTHK+LRGPR +I + K E+ E+++N AVFPG QG
Sbjct: 214 PSPVQIADVTTTTTHKTLRGPRAGLI--------LAKANPEL----EKRLNSAVFPGSQG 261
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA K+
Sbjct: 262 GPLMHIIAAKAVAFKE 277
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 118/255 (46%), Positives = 164/255 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+ +GS++TNKY+EGYPG RYYGG E++D E+L +R + F K+ NVQ SGS
Sbjct: 39 MEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC---KFA-NVQPNSGS 94
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY AL+ P D+I+ +DL HGGHL+HG K+S+ +E+ Y + E G I
Sbjct: 95 QANQGVYAALINPGDKILGMDLSHGGHLTHG-----AKVSSSGKMYESCFYGV-ELDGRI 148
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY+++ + A +PKLIV GASAYAR+ D+ + R++ ++ A + AD+AHI+GLV AG
Sbjct: 149 DYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGEH 208
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF +A VV++TTHK+LRGPRG +I +E+ K KIN A+FPG+QG
Sbjct: 209 PSPFPHAHVVSSTTHKTLRGPRGGIIMTND--EELAK-----------KINSAIFPGIQG 255
Query: 241 GPHNHTITGLAVALK 255
GP H I AV K
Sbjct: 256 GPLMHVIAAKAVGFK 270
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 112/256 (43%), Positives = 165/256 (64%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A+GS +TNKY+EG PG RYYGG EY+D+ E+L ++RA + F + VNVQ SG+
Sbjct: 44 MEAMGSHLTNKYAEGLPGKRYYGGCEYVDVVENLARERAKKLFGAEH----VNVQPHSGA 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N Y A L+P D ++ ++L HGGHL+HG ++ + + Y + T I
Sbjct: 100 QANMAAYMAFLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNFVSYGVEPDTEKI 154
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+Y+++ + A +PK+IVAGASAY R+ D++ ++++ ++ A ++ DMAHI+GLVAAG+
Sbjct: 155 NYEKVFELAYKHKPKMIVAGASAYPRVIDFKHLKEIADEVGAYLMVDMAHIAGLVAAGLH 214
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP YADVVTTTTHK+LRGPRG +IF + ++ KI++ VFPG+QG
Sbjct: 215 PSPIPYADVVTTTTHKTLRGPRGGVIFCKA--------------EHAAKIDKTVFPGVQG 260
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA K+
Sbjct: 261 GPLMHVIAAKAVAFKE 276
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 119/253 (47%), Positives = 154/253 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GSVMTNKY+EGYPG RYYGG +Y+D+AE+L +RA + F NVQ SGS
Sbjct: 51 MQAQGSVMTNKYAEGYPGRRYYGGCQYVDIAENLAIERAKQLFGCG----FANVQPNSGS 106
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ AL+KP D I+ + L GGHL+HG + +F + Y + + +
Sbjct: 107 QANQGVFQALIKPGDTILGMSLDAGGHLTHGAAPNQS-----GKWFNAVQYGVRQQDNLL 161
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQ+E A RPKLI+AG SA R D+ R+R++ + A + DMAH +GLVAAG
Sbjct: 162 DYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVAAGEH 221
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF +A V TTTTHK+LRGPRG MI N + D +K+N A+FPG+QG
Sbjct: 222 PSPFPHAHVATTTTHKTLRGPRGGMIL-------TNDE------DIAKKVNSAIFPGIQG 268
Query: 241 GPHNHTITGLAVA 253
GP H I AVA
Sbjct: 269 GPLMHVIAAKAVA 281
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 119/253 (47%), Positives = 154/253 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GSVMTNKY+EGYPG RYYGG +Y+D+AE+L +RA + F NVQ SGS
Sbjct: 51 MQAQGSVMTNKYAEGYPGRRYYGGCQYVDIAENLAIERAKQLFGCG----FANVQPNSGS 106
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ AL+KP D I+ + L GGHL+HG + +F + Y + + +
Sbjct: 107 QANQGVFQALIKPGDTILGMSLDAGGHLTHGAAPNQS-----GKWFNAVQYGVRQQDNLL 161
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQ+E A RPKLI+AG SA R D+ R+R++ + A + DMAH +GLVAAG
Sbjct: 162 DYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVAAGEH 221
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF +A V TTTTHK+LRGPRG MI N + D +K+N A+FPG+QG
Sbjct: 222 PSPFPHAHVATTTTHKTLRGPRGGMIL-------TNDE------DIAKKVNSAIFPGIQG 268
Query: 241 GPHNHTITGLAVA 253
GP H I AVA
Sbjct: 269 GPLMHVIAAKAVA 281
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 114/256 (44%), Positives = 158/256 (61%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
+QA GS+ TNKY+EGYPG RYY G + D+ E+L +R F K+ NVQ SGS
Sbjct: 46 LQAQGSIFTNKYAEGYPGKRYYCGCHFADIVENLAIERLCRLFGC---KFA-NVQPHSGS 101
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ ALLKP D ++ + L GGHL+HG IS +F + Y+++ TG I
Sbjct: 102 QANQGVFAALLKPGDTVIGMSLDCGGHLTHG---SAPSISGK--WFNAVQYQVDRDTGLI 156
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D D++EK A P LI+AG+S+Y R+ D++R R++ +K A +LAD+AH +GL+AAG
Sbjct: 157 DMDEIEKLAVEHNPSLIIAGSSSYPRVIDFKRFREIADKVGAYLLADIAHYAGLIAAGEF 216
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP EYA V+T+TTHK+LRGPRGA+I + D +KI ++FPG+QG
Sbjct: 217 PSPVEYAHVITSTTHKTLRGPRGAVIMTN-------------YEDIHKKIQSSIFPGMQG 263
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA +
Sbjct: 264 GPLMHVIAAKAVAFAE 279
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 114/256 (44%), Positives = 157/256 (61%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A GS +TNKY+EGYPG RYYGG EY+D+AE L RA E F NVQ +GS
Sbjct: 44 LEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRAKELFGATY----ANVQPHAGS 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ AL+ P +++ + L HGGHL+HG S S +E Y L+ TG I
Sbjct: 100 QANAAVFQALVTPGGKVLGMSLAHGGHLTHGSHVS---FSGKS--YEAFQYGLHPETGDI 154
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DY++LE+ A +P++I+ G SA++ + D+ R+R + +K A DMAH++GL+AAG+
Sbjct: 155 DYEELERLAVEHKPEMIIGGFSAFSGVVDWARMRTIADKVGAYFFVDMAHVAGLIAAGLY 214
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P +A VVTTTTHK+L GPRG +I G + E Y +K+N AVFPG QG
Sbjct: 215 PNPVPHAHVVTTTTHKTLAGPRGGLII--SGCDD------EAIY---KKLNSAVFPGGQG 263
Query: 241 GPHNHTITGLAVALKQ 256
GP H I AVA K+
Sbjct: 264 GPLMHIIAAKAVAFKE 279
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 119/257 (46%), Positives = 158/257 (61%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A G+V+TNKY+EGYPG RYYGG E++D+ E+L RA F+ D VNVQ SG+
Sbjct: 54 MEAQGTVLTNKYAEGYPGRRYYGGCEHVDLVETLAIDRAKLIFKAD----FVNVQPHSGA 109
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V AL+KP D I+ + L GGHL+HG K + +F + Y + + I
Sbjct: 110 QANGAVMLALVKPGDTILGMSLDAGGHLTHG-----AKPAQSGKWFNAIHYGVRKDDMRI 164
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
DYDQ+ A +PK+I+AG SA R D+ + R++ ++ AI++ DMAHI+GLVAAG
Sbjct: 165 DYDQVLALAIEHQPKMIIAGGSAIPRQIDFAKFREIADQVGAILMVDMAHIAGLVAAGAH 224
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
+P +ADVVTTTTHK+LRGPRG +I N D +KIN AVFPGLQG
Sbjct: 225 QNPLPFADVVTTTTHKTLRGPRGGLIL-------TNNP------DVAKKINSAVFPGLQG 271
Query: 241 GPHNHTITGLAVALKQV 257
GP H I AVAL +V
Sbjct: 272 GPLMHVIAAKAVALGEV 288
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 115/256 (44%), Positives = 158/256 (61%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
+QA GSV+TNKY+EGYPG+RYY G +D+AE+L +R + F K+ NVQ SGS
Sbjct: 46 LQAQGSVLTNKYAEGYPGSRYYCGCSEVDVAETLAVERLCKLFGC---KYA-NVQPHSGS 101
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N QVY ALLKP D ++ + L GGHL+HG + +S +F +PY + T +
Sbjct: 102 QANQQVYMALLKPGDTVLGMSLDSGGHLTHGAGPN---VSGK--WFNAVPYNVRRDTNLL 156
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D ++E+ A +P LI+AGAS+Y R D++ R + +K A LAD+AH SGL+A G
Sbjct: 157 DMGEIEEIALRVKPNLIIAGASSYPRRIDFKAFRAIADKVGAYFLADIAHYSGLIAGGQY 216
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+PF YA VVT+TTHK+LRGPRG +I +EI+K K+ AVFPG+QG
Sbjct: 217 PTPFGYAHVVTSTTHKTLRGPRGGVIMTDD--EEIHK-----------KLRSAVFPGMQG 263
Query: 241 GPHNHTITGLAVALKQ 256
G H I AVA ++
Sbjct: 264 GALMHVIAAKAVAFRE 279
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 102/174 (58%), Positives = 130/174 (74%)
Query: 89 SHGYQT--DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 146
S GYQ + + +S + + TG IDY+QL +A LFRP+LI+AG SAYAR
Sbjct: 75 SSGYQPRPSSSSLCPISSTALAVCVSVQPKTGLIDYNQLALTARLFRPRLIIAGTSAYAR 134
Query: 147 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 206
L DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +I
Sbjct: 135 LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLI 194
Query: 207 FFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 259
F+RKGVK ++ K G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ CT
Sbjct: 195 FYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 248
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 110/253 (43%), Positives = 159/253 (62%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
M+A GSV+TNKY+EGYPG RYYGG E++D+ E + + R E F + VNVQ SG+
Sbjct: 40 MEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRVKEIFGAEH----VNVQPHSGA 95
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N VY +L+ D ++ ++L HGGHL+HG + S V F + Y ++ + I
Sbjct: 96 QANMAVYFTILEQGDTVLGMNLSHGGHLTHGSPVN---FSGVQYNF--VEYGVDAESHCI 150
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YD + A +PKLIVAGASAY R+ D++R R++ ++ A ++ DMAHI+GLVAAG+
Sbjct: 151 NYDDVLAKAKEHKPKLIVAGASAYPRVIDFKRFREIADEVGAYLMVDMAHIAGLVAAGLH 210
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
P+P +A VTTTTHK+LRGPRG MI + + ++I++++FPG+QG
Sbjct: 211 PNPVPHAHFVTTTTHKTLRGPRGGMILCEE--------------QFAKQIDKSIFPGIQG 256
Query: 241 GPHNHTITGLAVA 253
GP H I AVA
Sbjct: 257 GPLMHVIAAKAVA 269
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 96/143 (67%), Positives = 119/143 (83%)
Query: 118 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 177
G IDY+QL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA
Sbjct: 2 GLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAA 61
Query: 178 GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFP 236
VIPSPF++AD+VTTTTHK+LRG R +IF+RKGVK ++ K G+E+ Y +E++IN AVFP
Sbjct: 62 KVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFP 121
Query: 237 GLQGGPHNHTITGLAVALKQVCT 259
LQGGPHNH I +AVALKQ CT
Sbjct: 122 SLQGGPHNHAIAAVAVALKQACT 144
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 115/259 (44%), Positives = 157/259 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
+QA GSV+TNKY+EG PG RYYGG E++D+ E+L + RA F + NVQ SG+
Sbjct: 41 LQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGA 96
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V AL+ P +R++ LDL +GGHL+HG +++ +E Y ++ +T I
Sbjct: 97 QANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLI 151
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D D + +A FRPK+I+AG SAY R+ D+ R + ++ A +L DMAH +GLVAAG+
Sbjct: 152 DMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLH 211
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +ADVV+TT HK+L G R +I + KQ Y + IN AVFPG QG
Sbjct: 212 PSPVPHADVVSTTVHKTLGGGRSGLI--------VGKQ------QYAKAINSAVFPGQQG 257
Query: 241 GPHNHTITGLAVALKQVCT 259
GP H I G AVALK T
Sbjct: 258 GPLMHVIAGKAVALKIAAT 276
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 94/144 (65%), Positives = 116/144 (80%)
Query: 117 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 176
TGYI+YDQLE++A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVA
Sbjct: 46 TGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVA 105
Query: 177 AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVF 235
AGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+E +Y+ E IN AVF
Sbjct: 106 AGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGEETYYELESLINSAVF 165
Query: 236 PGLQGGPHNHTITGLAVALKQVCT 259
PGLQGGPHNH I G+AVALKQ T
Sbjct: 166 PGLQGGPHNHAIAGVAVALKQAMT 189
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 115/253 (45%), Positives = 152/253 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA G+ +TNKY+EGYPG RYYGG E++D E + +RA F+ NVQ SG+
Sbjct: 58 MQAQGTCLTNKYAEGYPGRRYYGGCEHVDSVEQIAIERAKMLFQCQY----ANVQPHSGA 113
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V ALL+P D IM + L GGHL+HG + +S +F + Y ++ T I
Sbjct: 114 QANGAVMLALLQPGDTIMGMSLDAGGHLTHGARP---ALSGK--WFNAVQYGVDRQTLEI 168
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YD + A +PK+I+AG SA R D+ + R + ++ A+++ DMAHI+GLVA G
Sbjct: 169 NYDSVRALALEHKPKMIIAGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAH 228
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +A VVTTTTHK+LRGPRG MI +EI+K KIN AVFPGLQG
Sbjct: 229 PSPLPHAHVVTTTTHKTLRGPRGGMILTNS--EEIHK-----------KINSAVFPGLQG 275
Query: 241 GPHNHTITGLAVA 253
GP H I AVA
Sbjct: 276 GPLMHVIAAKAVA 288
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 115/253 (45%), Positives = 152/253 (60%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA G+ +TNKY+EGYPG RYYGG E++D E + +RA F+ NVQ SG+
Sbjct: 58 MQAQGTCLTNKYAEGYPGRRYYGGCEHVDSVEQIAIERAKMLFQCQY----ANVQPHSGA 113
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V ALL+P D IM + L GGHL+HG + +S +F + Y ++ T I
Sbjct: 114 QANGAVMLALLQPGDTIMGMSLDAGGHLTHGARP---ALSGK--WFNAVQYGVDRQTLEI 168
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
+YD + A +PK+I+AG SA R D+ + R + ++ A+++ DMAHI+GLVA G
Sbjct: 169 NYDSVRALALEHKPKMIIAGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAH 228
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +A VVTTTTHK+LRGPRG MI +EI+K KIN AVFPGLQG
Sbjct: 229 PSPLPHAHVVTTTTHKTLRGPRGGMILTNS--EEIHK-----------KINSAVFPGLQG 275
Query: 241 GPHNHTITGLAVA 253
GP H I AVA
Sbjct: 276 GPLMHVIAAKAVA 288
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 108/259 (41%), Positives = 149/259 (57%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A GSV TNKY+EGYPG RYY G EY D E L +R + F NVQ SGS
Sbjct: 49 LEAQGSVFTNKYAEGYPGKRYYCGCEYADQIERLAIERVCKLFGCSY----ANVQPHSGS 104
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N V+ ALL P D ++ L GGHL+HG ++ +F + Y + I
Sbjct: 105 QANQAVFLALLNPGDTVLGFSLASGGHLTHG-----ASVNLSGKWFNAVHYNVRRDNFEI 159
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D D++ A P++I+AGASAY++ D++ R++ ++ A +L D+AH +GL+AAG
Sbjct: 160 DMDEVRDLAKKHSPRMIIAGASAYSKYIDFKSFREIADEVGAYLLGDVAHYAGLIAAGEY 219
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSPF Y DV+T+TTHK+LRGPRGA++ +E+ KIN A+FPGLQG
Sbjct: 220 PSPFPYVDVMTSTTHKTLRGPRGAIVL---------TNSEELI----RKINSAIFPGLQG 266
Query: 241 GPHNHTITGLAVALKQVCT 259
GP H I AVA + T
Sbjct: 267 GPQMHAIAARAVAFGEALT 285
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 113/255 (44%), Positives = 146/255 (57%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
MQA GSV+TNKY+EGYPG RYYGG E++D E L R F + NVQ SG+
Sbjct: 44 MQAQGSVLTNKYAEGYPGRRYYGGCEFVDGVEQLAIDRVKALFGAEY----ANVQPHSGA 99
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 120
+N ALL P D I+ L L HGGHL+HG +I+ + Y +++ +
Sbjct: 100 TANAATMHALLNPGDTILGLSLAHGGHLTHGM-----RINFSGKLYHATAYEVSKEDYLV 154
Query: 121 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 180
D D + ++A RPK+I+AG SAY R D+ R R + ++ A+++ DMAH +GLVAAGV
Sbjct: 155 DMDAVAEAARTHRPKMIIAGWSAYPRQLDFARFRAIADEVDAVLMVDMAHFAGLVAAGVH 214
Query: 181 PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG 240
PSP +A VVT+TTHK+L GPRG +I I K KIN AVFPG QG
Sbjct: 215 PSPVPHAHVVTSTTHKTLGGPRGGIILCNDPA--IAK-----------KINSAVFPGQQG 261
Query: 241 GPHNHTITGLAVALK 255
GP H I A A K
Sbjct: 262 GPLEHVIAAKATAFK 276
>UNIPROTKB|I3LGT5 [details] [associations]
symbol:I3LGT5 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 EMBL:FP565227
Ensembl:ENSSSCT00000028049 Uniprot:I3LGT5
Length = 161
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 93/125 (74%), Positives = 107/125 (85%)
Query: 78 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 137
M LDLP GGHL+HGY TD K+ISA SIFFE+MPY+LN TG IDYDQL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLI 60
Query: 138 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 197
+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPFE+ADVVTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKT 120
Query: 198 LRGPR 202
LRG R
Sbjct: 121 LRGAR 125
>UNIPROTKB|G3V540 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
SMR:G3V540 Ensembl:ENST00000553837 Ensembl:ENST00000554604
Uniprot:G3V540
Length = 192
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 81/114 (71%), Positives = 95/114 (83%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 114
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 177
>UNIPROTKB|J3KRZ5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] InterPro:IPR001085
InterPro:IPR015421 Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 EMBL:AC127537
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 Ensembl:ENST00000582653 Uniprot:J3KRZ5
Length = 167
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 75/106 (70%), Positives = 90/106 (84%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGS
Sbjct: 62 LEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGS 121
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 106
P+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFF
Sbjct: 122 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFF 167
>UNIPROTKB|G3V2W0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2W0 SMR:G3V2W0 Ensembl:ENST00000554310
ArrayExpress:G3V2W0 Bgee:G3V2W0 Uniprot:G3V2W0
Length = 160
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 68/97 (70%), Positives = 79/97 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 97
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D K
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVK 160
>UNIPROTKB|G3V4X0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4X0 SMR:G3V4X0 Ensembl:ENST00000557427
ArrayExpress:G3V4X0 Bgee:G3V4X0 Uniprot:G3V4X0
Length = 159
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 67/95 (70%), Positives = 78/95 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD 95
P+N VYTALL+PHDRIM LDLP GGHL+HGY +D
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSD 158
>UNIPROTKB|G3V2E4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2E4 SMR:G3V2E4 Ensembl:ENST00000557433
ArrayExpress:G3V2E4 Bgee:G3V2E4 Uniprot:G3V2E4
Length = 171
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 61/86 (70%), Positives = 70/86 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 85 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 144
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGG 86
P+N VYTALL+PHDRIM LDLP GG
Sbjct: 145 PANLAVYTALLQPHDRIMGLDLPDGG 170
>UNIPROTKB|G3V4T0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4T0 SMR:G3V4T0 Ensembl:ENST00000555773
ArrayExpress:G3V4T0 Bgee:G3V4T0 Uniprot:G3V4T0
Length = 149
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 61/86 (70%), Positives = 70/86 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLPHGG 86
P+N VYTALL+PHDRIM LDLP GG
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLPDGG 149
>UNIPROTKB|G3V3Y8 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2 SMR:G3V3Y8
Ensembl:ENST00000553529 Ensembl:ENST00000556737 Uniprot:G3V3Y8
Length = 147
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 59/83 (71%), Positives = 68/83 (81%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIMALDLP 83
P+N VYTALL+PHDRIM LDLP
Sbjct: 124 PANLAVYTALLQPHDRIMGLDLP 146
>UNIPROTKB|G3V241 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V241 SMR:G3V241 Ensembl:ENST00000557703
ArrayExpress:G3V241 Bgee:G3V241 Uniprot:G3V241
Length = 142
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 55/78 (70%), Positives = 64/78 (82%)
Query: 1 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 60
++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGS
Sbjct: 64 LEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 123
Query: 61 PSNFQVYTALLKPHDRIM 78
P+N VYTALL+PHDRIM
Sbjct: 124 PANLAVYTALLQPHDRIM 141
>TIGR_CMR|SPO_3529 [details] [associations]
symbol:SPO_3529 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008168 GO:GO:0006544
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239403 RefSeq:YP_168724.1 ProteinModelPortal:Q5LMN4
GeneID:3192992 KEGG:sil:SPO3529 PATRIC:23380529 OMA:ATMANLA
ProtClustDB:CLSK759294 Uniprot:Q5LMN4
Length = 431
Score = 198 (74.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 59/197 (29%), Positives = 100/197 (50%)
Query: 13 SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK 72
S GYPG +Y G E I+ E + + A + F ++ ++ SG+ +N + AL +
Sbjct: 70 SLGYPGDKYEMGLEAIEEIEVIAAELAAKVFNA---RYA-EIRVGSGALANLYGFMALTR 125
Query: 73 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGY-IDYDQLEKSAT 130
P D I+A GGH++H K ++ +T+ + ++ GY +D L + A
Sbjct: 126 PGDTIIAPPASIGGHVTH------HKAGCAGLYGLKTIEAPV-DADGYSLDLSALAELAE 178
Query: 131 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-EYADV 189
RP+LI G S + +R++ ++ A +L D AH G++A G +P E A +
Sbjct: 179 RHRPRLITVGGSLNLFPHPVAAVREIADRVGAKVLFDAAHQCGIIAGGAWANPLDEGAHL 238
Query: 190 VTTTTHKSLRGPRGAMI 206
+T +T+KSL GP G +I
Sbjct: 239 MTMSTYKSLGGPAGGLI 255
>UNIPROTKB|G3V2D2 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] InterPro:IPR001085 InterPro:IPR015421
Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2D2 SMR:G3V2D2 Ensembl:ENST00000557269
ArrayExpress:G3V2D2 Bgee:G3V2D2 Uniprot:G3V2D2
Length = 52
Score = 154 (59.3 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 78 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 114
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 37
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 297 297 0.00093 115 3 11 22 0.39 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 83
No. of states in DFA: 598 (64 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.24u 0.11s 23.35t Elapsed: 00:00:01
Total cpu time: 23.25u 0.12s 23.37t Elapsed: 00:00:01
Start: Fri May 10 00:30:36 2013 End: Fri May 10 00:30:37 2013